Cryo-EM Structure of G6PT1 treated with G6P

Method: ELECTRON MICROSCOPY D_max: 72.4 Å Quality: REASONABLE

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	9ws8
deposition_date	2025-09-12
title	Cryo-EM Structure of G6PT1 treated with G6P
keywords	G6P, TRANSPORT PROTEIN; TRANSPORT PROTEIN
method	ELECTRON MICROSCOPY

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	22.65 Å
rg_electron	21.80 Å
i0	29725500.00
molecular_weight	45007.0 kDa
excluded_volume	57576 Å³
envelope_volume	65891 Å³
shell_volume	24974 Å³
envelope_diameter	75.1 Å
shell_rg	28.91 Å
envelope_rg	22.11 Å
shape_rg	21.79 Å
total_rg	22.76 Å
total_atoms	3175
n_residues	416
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	72.4 Å
rg_real	22.58 Å
rg_real_error	0.42 Å
i0_real	2.9730e+07
i0_real_error	3.8910e+05
rg_reciprocal	22.60 Å
i0_reciprocal	29730000.0000
total_estimate	0.7269
solution_quality	REASONABLE a REASONABLE solution
n_peaks	2
r_peak_primary	27.4 Å
skewness	0.228
kurtosis	-0.441
angular_range	— – 0.3500 Å⁻¹
current_alpha	0.0000
highest_alpha	5581000.0000
n_real_points	67
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.914; Stabil: 1.000; Sysdev: 0.242; Positv: 1.000; Valcen: 0.999; Smooth: 0.976

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4. Crystallography & Experiment

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5. Entities & Polymer Info (1)

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6. Citations (1)

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length_a	1.000 Å
length_b	1.000 Å
length_c	1.000 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	—

space_group	P 1
int_tables_number	1
crystal_system	—

resolution	3.470 Å
resolution_low	— Å
r_factor	—
r_work	—
r_free	—

resolution	3.47 Å
resolution_method	—
num_particles	152941

description	Glucose-6-phosphate exchanger SLC37A4
formula_weight	46391.8 kDa
src_method	man
entity_count	1

Cryo-EM Structure of G6PT1 treated with G6P

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

EM 3D

5. Entities & Polymer Info (1)

Entity 1 polymer

Polymer

Source

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)

organism	Homo sapiens
common_name	human
ncbi_taxonomy_id	9606
host_organism	Homo sapiens

fit	/app/data/saxs_computation/ws/9ws8/9ws8.fit
pddf	/app/data/pr_computation/ws/9ws8/9ws8.pr.out
profile	/app/data/saxs_computation/ws/9ws8/9ws8.dat

type	polypeptide(L)
strand_id	A
atom_count	3175