Current Protein Identity:A0A059PIQ0 New Search
Main Difference Dimensions in This Set
Different construct Different mutation/modification Different assembly state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
28QL GFP bound to distal DARPin (AHIR dodecamer scaffold system) Deposited 2026-02-13 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain B 3–229(227 aa)
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.72 Å
5BT0 Switching GFP fluorescence using genetically encoded phenyl azide chemistry through two different non-native post-translational modifications routes at the same position. Deposited 2015-06-02 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–234(232 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 3 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 8.5;297 K;50 mM MMT, 2.5 M (NH4)2SO4
Resolution 2.03 Å R-free 0.204
5BT0 Switching GFP fluorescence using genetically encoded phenyl azide chemistry through two different non-native post-translational modifications routes at the same position. Deposited 2015-06-02 Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 3–234(232 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 3 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 8.5;297 K;50 mM MMT, 2.5 M (NH4)2SO4
Resolution 2.03 Å R-free 0.204
5BTT Switching GFP fluorescence using genetically encoded phenyl azide chemistry through two different non-native post-translational modifications routes at the same position. Deposited 2015-06-03 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–231(229 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 5 GOL GLYCEROL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 8.5;297 K;50 mM MMT, 2.5 M (NH4)2SO4
Resolution 2.14 Å R-free 0.207
5BTT Switching GFP fluorescence using genetically encoded phenyl azide chemistry through two different non-native post-translational modifications routes at the same position. Deposited 2015-06-03 Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 3–231(229 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 6 GOL GLYCEROL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 8.5;297 K;50 mM MMT, 2.5 M (NH4)2SO4
Resolution 2.14 Å R-free 0.207
5DPG sfGFP mutant - 133 p-cyano-L-phenylalanine Deposited 2015-09-12 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 1–238(238 aa)
Mutation:M1V, R2S, S30R, T65(CRO), Y66(CRO), G67(CRO), A72S, Q80R, D133(4CF), A206V Non-standard monomer:Yes (specific site not provided by mmCIF) EDO 1,2-ETHANEDIOL × 10 NA SODIUM ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 6.5;298 K;22% PEG 3350, 2% Tacsimate pH 6, 0.1 M Bis-Tris pH 6.5
Resolution 1.85 Å R-free 0.192
5DPH sfGFP mutant - 149 p-cyano-L-phenylalanine Deposited 2015-09-12 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 1–238(238 aa)
Mutation:M1V, R2S, S30R, T65(CRO), Y66(CRO), G67(CRO), A72S, Q80R, A206V, N149(4CF) Non-standard monomer:Yes (specific site not provided by mmCIF) CO2 CARBON DIOXIDE × 1 MG MAGNESIUM ION × 5 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 8.5;298 K;0.1 M Tris pH 8.5, 20% PEG 4000, 0.21 M MgCl2-6H2O
Resolution 1.42 Å R-free 0.208
5DPH sfGFP mutant - 149 p-cyano-L-phenylalanine Deposited 2015-09-12 Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 1–238(238 aa)
Mutation:M1V, R2S, S30R, T65(CRO), Y66(CRO), G67(CRO), A72S, Q80R, A206V, N149(4CF) Non-standard monomer:Yes (specific site not provided by mmCIF) CO2 CARBON DIOXIDE × 1 MG MAGNESIUM ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 8.5;298 K;0.1 M Tris pH 8.5, 20% PEG 4000, 0.21 M MgCl2-6H2O
Resolution 1.42 Å R-free 0.208
5DPI sfGFP double mutant - 133/149 p-cyano-L-phenylalanine Deposited 2015-09-12 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 1–238(238 aa)
Mutation:M1V, R2S, S30R, T65(CRO), Y66(CRO), G67(CRO), A72S, Q80R, A206V, D133(4CF), N149(4CF) Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 7.5;298 K;0.2 M potassium sodium formate, 30% PEG 3350
Resolution 2.54 Å R-free 0.243
5DPI sfGFP double mutant - 133/149 p-cyano-L-phenylalanine Deposited 2015-09-12 Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 1–238(238 aa)
Mutation:M1V, R2S, S30R, T65(CRO), Y66(CRO), G67(CRO), A72S, Q80R, A206V, D133(4CF), N149(4CF) Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 7.5;298 K;0.2 M potassium sodium formate, 30% PEG 3350
Resolution 2.54 Å R-free 0.243
5DPI sfGFP double mutant - 133/149 p-cyano-L-phenylalanine Deposited 2015-09-12 Assembly 3 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain C 1–238(238 aa)
Mutation:M1V, R2S, S30R, T65(CRO), Y66(CRO), G67(CRO), A72S, Q80R, A206V, D133(4CF), N149(4CF) Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 7.5;298 K;0.2 M potassium sodium formate, 30% PEG 3350
Resolution 2.54 Å R-free 0.243
5DPI sfGFP double mutant - 133/149 p-cyano-L-phenylalanine Deposited 2015-09-12 Assembly 4 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain D 1–238(238 aa)
Mutation:M1V, R2S, S30R, T65(CRO), Y66(CRO), G67(CRO), A72S, Q80R, A206V, D133(4CF), N149(4CF) Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 7.5;298 K;0.2 M potassium sodium formate, 30% PEG 3350
Resolution 2.54 Å R-free 0.243
5DPI sfGFP double mutant - 133/149 p-cyano-L-phenylalanine Deposited 2015-09-12 Assembly 5 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain E 1–238(238 aa)
Mutation:M1V, R2S, S30R, T65(CRO), Y66(CRO), G67(CRO), A72S, Q80R, A206V, D133(4CF), N149(4CF) Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 7.5;298 K;0.2 M potassium sodium formate, 30% PEG 3350
Resolution 2.54 Å R-free 0.243
5DPI sfGFP double mutant - 133/149 p-cyano-L-phenylalanine Deposited 2015-09-12 Assembly 6 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain F 1–238(238 aa)
Mutation:M1V, R2S, S30R, T65(CRO), Y66(CRO), G67(CRO), A72S, Q80R, A206V, D133(4CF), N149(4CF) Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 7.5;298 K;0.2 M potassium sodium formate, 30% PEG 3350
Resolution 2.54 Å R-free 0.243
5DPJ sfGFP double mutant - 133/149 p-ethynyl-L-phenylalanine Deposited 2015-09-12 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 1–238(238 aa)
Mutation:M1V, R2S, S30R, T65(CRO), Y66(CRO), G67(CRO), A72S, Q80R, D133(5DW), N149(5DW), A206V Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 7;298 K;22% PEG 3350 and 0.20 M sodium citrate tribasic, pH 7
Resolution 2.50 Å R-free 0.244
5DPJ sfGFP double mutant - 133/149 p-ethynyl-L-phenylalanine Deposited 2015-09-12 Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 1–238(238 aa)
Mutation:M1V, R2S, S30R, T65(CRO), Y66(CRO), G67(CRO), A72S, Q80R, D133(5DW), N149(5DW), A206V Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 7;298 K;22% PEG 3350 and 0.20 M sodium citrate tribasic, pH 7
Resolution 2.50 Å R-free 0.244
5DPJ sfGFP double mutant - 133/149 p-ethynyl-L-phenylalanine Deposited 2015-09-12 Assembly 3 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain C 1–238(238 aa)
Mutation:M1V, R2S, S30R, T65(CRO), Y66(CRO), G67(CRO), A72S, Q80R, D133(5DW), N149(5DW), A206V Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 7;298 K;22% PEG 3350 and 0.20 M sodium citrate tribasic, pH 7
Resolution 2.50 Å R-free 0.244
5DPJ sfGFP double mutant - 133/149 p-ethynyl-L-phenylalanine Deposited 2015-09-12 Assembly 4 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain D 1–238(238 aa)
Mutation:M1V, R2S, S30R, T65(CRO), Y66(CRO), G67(CRO), A72S, Q80R, D133(5DW), N149(5DW), A206V Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 7;298 K;22% PEG 3350 and 0.20 M sodium citrate tribasic, pH 7
Resolution 2.50 Å R-free 0.244
5DY6 Enhanced superfolder GFP with DBCO at 148 Deposited 2015-09-24 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 5–232(228 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 6;294 K;0.1 M PCTP Buffer, 15% PEG 1500
Resolution 2.66 Å R-free 0.290
5DY6 Enhanced superfolder GFP with DBCO at 148 Deposited 2015-09-24 Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 5–232(228 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 6;294 K;0.1 M PCTP Buffer, 15% PEG 1500
Resolution 2.66 Å R-free 0.290
5EHU sfGFP mutant with unnatural amino acid 4-azidoethoxy-L-phenylalanine incorporated at the 149 site Deposited 2015-10-28 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 2–238(237 aa)
Mutation:S30R, A72S, Q80R, N149(4LZ), A206V Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 7.5;298 K;A 40 mg/mL solution of sfGFP-149-AePhe in a 20 mM Hepes buffer pH 7.5 was combined with a precipitation solution (20% PEG 8000, 100 mM Hepes pH 7.5) in a 1:1 ratio to form crystals in a sitting drop well at room temperature
Resolution 1.45 Å R-free 0.208
5EHU sfGFP mutant with unnatural amino acid 4-azidoethoxy-L-phenylalanine incorporated at the 149 site Deposited 2015-10-28 Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 2–238(237 aa)
Mutation:S30R, A72S, Q80R, N149(4LZ), A206V Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 7.5;298 K;A 40 mg/mL solution of sfGFP-149-AePhe in a 20 mM Hepes buffer pH 7.5 was combined with a precipitation solution (20% PEG 8000, 100 mM Hepes pH 7.5) in a 1:1 ratio to form crystals in a sitting drop well at room temperature
Resolution 1.45 Å R-free 0.208
5JZK The Structure of Ultra Stable Green Fluorescent Protein Deposited 2016-05-17 Assembly 1 Protein homooligomer Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 3–238(236 aa) Fragment:UNP residues 3-238
Chain B 3–238(236 aa) Fragment:UNP residues 3-238
Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) NO3 NITRATE ION × 4 EDO 1,2-ETHANEDIOL × 2 CL CHLORIDE ION × 1 GOL GLYCEROL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;281 K;20 % w/v PEG 3350, 0.1 M Bis-Tris propane pH 6.5, 0.2 M Sodium nitrate
Resolution 1.90 Å R-free 0.176
5JZL The Structure of Monomeric Ultra Stable Green Fluorescent Protein Deposited 2016-05-17 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa) Fragment:UNP residues 3-238
Non-standard monomer:Yes (specific site not provided by mmCIF) CL CHLORIDE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;281 K;22% w/v PEG 8000, 0.2 M sodium chloride, 0.1 M phosphate-citrate buffer pH 3.7, 4% v/v acetone
Resolution 1.80 Å R-free 0.217
5JZL The Structure of Monomeric Ultra Stable Green Fluorescent Protein Deposited 2016-05-17 Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 3–238(236 aa) Fragment:UNP residues 3-238
Non-standard monomer:Yes (specific site not provided by mmCIF) CL CHLORIDE ION × 1 NA SODIUM ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;281 K;22% w/v PEG 8000, 0.2 M sodium chloride, 0.1 M phosphate-citrate buffer pH 3.7, 4% v/v acetone
Resolution 1.80 Å R-free 0.217
5MFC Designed armadillo repeat protein YIIIM5AII in complex with (KR)4-GFP Deposited 2016-11-18 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain B 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) ACT ACETATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 4.6;277 K;8% w/v PEG 4000, 0.1M Na acetate trihydrate pH 4.6,
Resolution 2.40 Å R-free 0.240
5MFC Designed armadillo repeat protein YIIIM5AII in complex with (KR)4-GFP Deposited 2016-11-18 Assembly 2 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain D 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 4.6;277 K;8% w/v PEG 4000, 0.1M Na acetate trihydrate pH 4.6,
Resolution 2.40 Å R-free 0.240
5NHN Super-Folder Green Fluorescent Protein Artificiall dimer linked via 148 position Deposited 2017-03-22 Assembly 1 Protein homooligomer Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 3–231(229 aa)
Chain B 3–231(229 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) DB5 [(4~{S})-4,5,6,7,8,9-hexahydro-1~{H}-cycloocta[d][1,2,3]triazol-4-yl] hydrogen carbonate × 1 GOL GLYCEROL × 1 EDO 1,2-ETHANEDIOL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;300 K;Condition C6 of the PACT Premier screen: 0.1 M PCTP Buffer, pH 9.0, 25% PEG 1500
Resolution 1.96 Å R-free 0.209
5NI3 sfGFP 204-204 mutant dimer Deposited 2017-03-23 Assembly 1 Protein homooligomer Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 3–229(227 aa)
Chain D 3–233(231 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) NA SODIUM ION × 6 DB5 [(4~{S})-4,5,6,7,8,9-hexahydro-1~{H}-cycloocta[d][1,2,3]triazol-4-yl] hydrogen carbonate × 1 GOL GLYCEROL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;291 K;PACT condition C6: 0.1M PCTP Buffer, pH 9.0, 25% PEG 1500
Resolution 1.28 Å R-free 0.191
5NI3 sfGFP 204-204 mutant dimer Deposited 2017-03-23 Assembly 2 Protein homooligomer Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain B 3–233(231 aa)
Chain C 3–233(231 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) NA SODIUM ION × 4 DB5 [(4~{S})-4,5,6,7,8,9-hexahydro-1~{H}-cycloocta[d][1,2,3]triazol-4-yl] hydrogen carbonate × 1 GOL GLYCEROL × 4 CL CHLORIDE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;291 K;PACT condition C6: 0.1M PCTP Buffer, pH 9.0, 25% PEG 1500
Resolution 1.28 Å R-free 0.191
5YR2 Structure of cpGFP66BPA Deposited 2017-11-08 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 146–235(90 aa)
Chain A 3–144(142 aa)
Mutation:Y163(BPA) Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:Y163(BPA) Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 5.5;289.15 K;PEG 3350 25%, 0.2M MgCl2,0.1M Bis-Tris pH 5.5
Resolution 1.80 Å R-free 0.215
5YR2 Structure of cpGFP66BPA Deposited 2017-11-08 Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 146–235(90 aa)
Chain B 3–144(142 aa)
Mutation:Y163(BPA) Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:Y163(BPA) Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 5.5;289.15 K;PEG 3350 25%, 0.2M MgCl2,0.1M Bis-Tris pH 5.5
Resolution 1.80 Å R-free 0.215
5Z6Y Structure of sfYFP48S95C66BPA Deposited 2018-01-25 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–230(228 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 4;289 K;0.1M sodium malonate pH 4.0, 12% PEG 3350
Resolution 1.87 Å R-free 0.236
6B9C Superfolder Green Fluorescent Protein with 4-nitro-L-phenylalanine at the chromophore (position 66) Deposited 2017-10-10 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Mutation:S30R, A72S, Q80R, A206V Non-standard monomer:Yes (specific site not provided by mmCIF) CO2 CARBON DIOXIDE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 7;298 K;1.4 M DL-Malic acid
Resolution 1.70 Å R-free 0.195
6B9C Superfolder Green Fluorescent Protein with 4-nitro-L-phenylalanine at the chromophore (position 66) Deposited 2017-10-10 Assembly 2 Protein homooligomer Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 3–238(236 aa)
Mutation:S30R, A72S, Q80R, A206V Non-standard monomer:Yes (specific site not provided by mmCIF) CO2 CARBON DIOXIDE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 7;298 K;1.4 M DL-Malic acid
Resolution 1.70 Å R-free 0.195
6H01 Crystal structure of a domain-swapped dark-state sfGFP containing the unnatural amino acid ortho-nitrobenzyl-tyrosine (ONBY) at residue 66 Deposited 2018-07-06 Assembly 1 Protein homooligomer Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 3–238(236 aa)
Chain C 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 7.5;291 K;1.1 M tri-Na-citrate 0.1 M Na-HEPES
Resolution 2.78 Å R-free 0.239
6H01 Crystal structure of a domain-swapped dark-state sfGFP containing the unnatural amino acid ortho-nitrobenzyl-tyrosine (ONBY) at residue 66 Deposited 2018-07-06 Assembly 2 Protein homooligomer Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain B 3–238(236 aa)
Chain D 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 7.5;291 K;1.1 M tri-Na-citrate 0.1 M Na-HEPES
Resolution 2.78 Å R-free 0.239
6HUT GFP8 - a stabilized variant of cycle-3 GFP Deposited 2018-10-09 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 1–245(245 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7.5;296 K;200 mM HEPES, 10% v/v isopropanol, 200 mM NaCl
Resolution 1.29 Å R-free 0.203
6KRG Crystal structure of sfGFP Y182TMSiPhe Deposited 2019-08-21 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 1–236(236 aa)
Mutation:Y182T Non-standard monomer:Yes (specific site not provided by mmCIF) GOL GLYCEROL × 2 CL CHLORIDE ION × 3 NA SODIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions EVAPORATION;289 K;PEG 6000, SODIUM CHLORIDE
Resolution 1.40 Å R-free 0.173
6OA8 Superfolder Green Fluorescent Protein with 4-cyano-L-phenylalanine at the chromophore (position 66) Deposited 2019-03-15 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) EDO 1,2-ETHANEDIOL × 3 SO4 SULFATE ION × 8 NA SODIUM ION × 4 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 8.5;295 K;0.1 M Tris-HCl, 2.0 M ammonium sulfate, pH 8.5
Resolution 1.37 Å R-free 0.189
6UN5 Crystal structure of green fluorescent protein (GFP); S65T, Y66(2,3,5-F3Y); ih circular permutant (50-51) Deposited 2019-10-10 Assembly 1 Insufficient information Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 51–237(187 aa)
Chain B 51–237(187 aa)
Mutation:;A72S, Q80R, T105K, E111V, I128T, K166T, I167V, S205T, A206V, S232R, Y241I, C250S,A72S, Q80R, T105K, E111V, I128T, K166T, I167V, S205T, A206V ; Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:;A72S, Q80R, T105K, E111V, I128T, K166T, I167V, S205T, A206V, S232R, Y241I, C250S,A72S, Q80R, T105K, E111V, I128T, K166T, I167V, S205T, A206V ; Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;293 K;0.15 M ammonium acetate, 31% PEG 3350
Resolution 1.36 Å R-free 0.205
6UN6 Crystal structure of green fluorescent protein (GFP); S65T, Y66(3-NO2Y); ih circular permutant (50-51) Deposited 2019-10-10 Assembly 1 Insufficient information Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 51–237(187 aa)
Chain B 51–237(187 aa)
Mutation:A72S, Q80R, T105K, E111V, I128T, K166T, I167V, S205T, A206V, S232R, Y241I, C250S Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:A72S, Q80R, T105K, E111V, I128T, K166T, I167V, S205T, A206V, S232R, Y241I, C250S Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;293 K;0.15 M ammonium acetate, 34% PEG 3350
Resolution 1.50 Å R-free 0.181
6UN7 Crystal structure of green fluorescent protein (GFP); S65T, Y66(3-OMeY); ih circular permutant (50-51) Deposited 2019-10-10 Assembly 1 Insufficient information Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 51–237(187 aa)
Chain B 51–237(187 aa)
Mutation:A72S, Q80R, T105K, E111V, I128T, K166T, I167V, S205T, A206V, S232R, Y241I, C250S Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:A72S, Q80R, T105K, E111V, I128T, K166T, I167V, S205T, A206V, S232R, Y241I, C250S Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;293 K;0.15 M ammonium acetate, 34% PEG 3350
Resolution 1.50 Å R-free 0.191
6WV3 Human VKOR with warfarin Deposited 2020-05-05 Assembly 1 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 1–144(144 aa) Fragment:GPF (UNP residues 1-144) + VKOR + GFP (UNP residues 146-231)
Chain A 146–231(86 aa) Fragment:GPF (UNP residues 1-144) + VKOR + GFP (UNP residues 146-231)
Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) OLC (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate × 3 SWF S-WARFARIN × 1 X-RAY DIFFRACTION
X-ray crystallization conditions LIPIDIC CUBIC PHASE;pH 6.5;295 K;37% PEG400, 0.1 M MES, pH 6.5
Resolution 2.20 Å R-free 0.223
6WV4 Human VKOR C43S with warfarin Deposited 2020-05-05 Assembly 1 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 1–144(144 aa) Fragment:GPF (UNP residues 1-144) + VKOR + GFP (UNP residues 146-231)
Chain A 146–231(86 aa) Fragment:GPF (UNP residues 1-144) + VKOR + GFP (UNP residues 146-231)
Mutation:C43S Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:C43S Non-standard monomer:Yes (specific site not provided by mmCIF) SWF S-WARFARIN × 1 X-RAY DIFFRACTION
X-ray crystallization conditions LIPIDIC CUBIC PHASE;pH 6.5;295 K;25-33% PEG400, 185-220 mM potassium formate, 0.1 M MES, pH 6.5
Resolution 3.01 Å R-free 0.292
6WV5 Human VKOR C43S mutant with vitamin K1 epoxide Deposited 2020-05-05 Assembly 1 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 1–144(144 aa) Fragment:GPF (UNP residues 1-144) + VKOR + GFP (UNP residues 146-231)
Chain A 146–231(86 aa) Fragment:GPF (UNP residues 1-144) + VKOR + GFP (UNP residues 146-231)
Mutation:C43S Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:C43S Non-standard monomer:Yes (specific site not provided by mmCIF) UAV (2R,3R)-2-hydroxy-3-methyl-2-[(2E,7S)-3,7,11,15-tetramethylhexadec-2-en-1-yl]-2,3-dihydronaphthalene-1,4-dione × 1 X-RAY DIFFRACTION
X-ray crystallization conditions LIPIDIC CUBIC PHASE;pH 6.5;295 K;25% PEG400, 0.1 M ammonium citrate dibasic, 0.1 M MES, pH 6.5
Resolution 2.80 Å R-free 0.270
6WV6 Human VKOR with phenindione Deposited 2020-05-05 Assembly 1 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 1–144(144 aa) Fragment:GPF (UNP residues 1-144) + VKOR + GFP (UNP residues 146-231)
Chain A 146–231(86 aa) Fragment:GPF (UNP residues 1-144) + VKOR + GFP (UNP residues 146-231)
Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) OLC (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate × 2 UAS Phenindione × 1 X-RAY DIFFRACTION
X-ray crystallization conditions LIPIDIC CUBIC PHASE;pH 6.5;295 K;34% PEG400, 80 mM lithium sulfate, 0.1 M MES, pH 6.5
Resolution 2.70 Å R-free 0.268
6WV7 Human VKOR with Chlorophacinone Deposited 2020-05-05 Assembly 1 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 1–144(144 aa) Fragment:GPF (UNP residues 1-144) + VKOR + GFP (UNP residues 146-231)
Chain A 146–231(86 aa) Fragment:GPF (UNP residues 1-144) + VKOR + GFP (UNP residues 146-231)
Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) UAJ Chlorophacinone × 1 X-RAY DIFFRACTION
X-ray crystallization conditions LIPIDIC CUBIC PHASE;pH 6.5;295 K;33% PEG400, 5% DMSO, 0.1 M sodium acetate, 0.1 M MES, pH 6.5
Resolution 2.48 Å R-free 0.245
6WV7 Human VKOR with Chlorophacinone Deposited 2020-05-05 Assembly 2 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 1–144(144 aa) Fragment:GPF (UNP residues 1-144) + VKOR + GFP (UNP residues 146-231)
Chain B 146–231(86 aa) Fragment:GPF (UNP residues 1-144) + VKOR + GFP (UNP residues 146-231)
Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) UAJ Chlorophacinone × 1 X-RAY DIFFRACTION
X-ray crystallization conditions LIPIDIC CUBIC PHASE;pH 6.5;295 K;33% PEG400, 5% DMSO, 0.1 M sodium acetate, 0.1 M MES, pH 6.5
Resolution 2.48 Å R-free 0.245
6WV8 Takifugu rubripes VKOR-like C138S mutant with vitamin K1 Deposited 2020-05-05 Assembly 1 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 146–238(93 aa)
Mutation:C138S Non-standard monomer:Yes (specific site not provided by mmCIF) PQN PHYLLOQUINONE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions LIPIDIC CUBIC PHASE;pH 6;295 K;25% PEG 400, 300 mM ammonium fluoride, 0.1 M MES pH 6.0
Resolution 3.01 Å R-free 0.293
6WVB Takifugu rubripes VKOR-like with warfarin Deposited 2020-05-05 Assembly 1 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 146–238(93 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) SWF S-WARFARIN × 1 X-RAY DIFFRACTION
X-ray crystallization conditions LIPIDIC CUBIC PHASE;pH 5.5;295 K;23% PEG400, 0.1 M Sodium nitrate, 0.1 M MES pH 5.5
Resolution 2.87 Å R-free 0.286
6WVH Human VKOR with Brodifacoum Deposited 2020-05-06 Assembly 1 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 1–144(144 aa) Fragment:GPF (UNP residues 1-144) + VKOR + GFP (UNP residues 146-231)
Chain A 146–231(86 aa) Fragment:GPF (UNP residues 1-144) + VKOR + GFP (UNP residues 146-231)
Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) UA7 Brodifacoum × 1 OLC (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate × 2 X-RAY DIFFRACTION
X-ray crystallization conditions LIPIDIC CUBIC PHASE;pH 6.5;295 K;32% PEG400, 0.1 M ammonium acetate, 1% 1,2,3-heptanetriol, 0.1 M MES, pH 6.5
Resolution 1.99 Å R-free 0.215
6WVH Human VKOR with Brodifacoum Deposited 2020-05-06 Assembly 2 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 1–144(144 aa) Fragment:GPF (UNP residues 1-144) + VKOR + GFP (UNP residues 146-231)
Chain B 146–231(86 aa) Fragment:GPF (UNP residues 1-144) + VKOR + GFP (UNP residues 146-231)
Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) UA7 Brodifacoum × 1 X-RAY DIFFRACTION
X-ray crystallization conditions LIPIDIC CUBIC PHASE;pH 6.5;295 K;32% PEG400, 0.1 M ammonium acetate, 1% 1,2,3-heptanetriol, 0.1 M MES, pH 6.5
Resolution 1.99 Å R-free 0.215
7A7M rsGreen0.7b in the green-on state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;150 mM KBr 30 % PEG 2000 mme
Resolution 1.60 Å R-free 0.198
7A7N rsGreen0.7b in the green-off state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM MMT pH 5.0 25 % PEG 1500
Resolution 1.20 Å R-free 0.170
7A7O rsGreen0.7-K206A in the green-on state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;200 mM Ammonium acetate 100 mM Bis-tris pH 5.5 25 % PEG 3350
Resolution 1.80 Å R-free 0.241
7A7P rsGreen0.7-K206A partially in the green-off state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) NO3 NITRATE ION × 1 EDO 1,2-ETHANEDIOL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;22 % PEG 4000 140 mM Mg(NO3)2
Resolution 1.48 Å R-free 0.197
7A7Q rsGreenF-K206A in the green-on state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) PEG DI(HYDROXYETHYL)ETHER × 1 GOL GLYCEROL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;200 mM NaCl 100 mM MES pH 6.0 20 % PEG 6000
Resolution 2.00 Å R-free 0.218
7A7R rsGreenF-K206A in the green-off state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) PEG DI(HYDROXYETHYL)ETHER × 1 GOL GLYCEROL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;200 mM NaCl 100 mM MES pH 6.0 20 % PEG 6000
Resolution 2.35 Å R-free 0.243
7A7S rsGreenF in the green-on state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM MIB pH 4.0 25 % PEG 1500
Resolution 1.73 Å R-free 0.235
7A7T rsGreenF partially in the green-off state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM MIB pH 4.0 25 % PEG 1500
Resolution 1.58 Å R-free 0.197
7A7U rsGreen1 in the green-on state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;2.0 M (NH4)2SO4 200 mM NaCl 100 mM Na-cacodylate pH 6.5
Resolution 2.15 Å R-free 0.201
7A7V rsGreen1-K206A partially in the green-off state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) GOL GLYCEROL × 1 PEG DI(HYDROXYETHYL)ETHER × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM Bis-tris pH 5.5 200 mM (NH4)2SO4 16 % PEG 8000
Resolution 2.00 Å R-free 0.194
7A7W rsGreen0.7-F145M partially in the green-on state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;200 mM NH4HCO2 20 % PEG 4000
Resolution 1.30 Å R-free 0.165
7A7X rsGreen0.7-F145M in the green-off state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM MMT pH 8.0 25 % PEG 1500
Resolution 1.85 Å R-free 0.207
7A7Y rsGreen0.7-F145Q in the green-on state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) NO3 NITRATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;200 mM KNO3 20 % PEG 3350
Resolution 0.97 Å R-free 0.142
7A7Z rsGreen0.7-K206A-E222G in the green-on state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;200 mM (Li)2SO4 100 mM Tris pH 8.5 40 % PEG 400
Resolution 1.10 Å R-free 0.142
7A80 rsGreen0.7-K206A-E222V in the green-on state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) NO3 NITRATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;291 K;26 % PEG 4000 500 mM Mg(NO3) 50 mM HEPES pH 7.5
Resolution 2.05 Å R-free 0.234
7A80 rsGreen0.7-K206A-E222V in the green-on state Deposited 2020-08-30 Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) NO3 NITRATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;291 K;26 % PEG 4000 500 mM Mg(NO3) 50 mM HEPES pH 7.5
Resolution 2.05 Å R-free 0.234
7A80 rsGreen0.7-K206A-E222V in the green-on state Deposited 2020-08-30 Assembly 3 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain C 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) NO3 NITRATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;291 K;26 % PEG 4000 500 mM Mg(NO3) 50 mM HEPES pH 7.5
Resolution 2.05 Å R-free 0.234
7A80 rsGreen0.7-K206A-E222V in the green-on state Deposited 2020-08-30 Assembly 4 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain D 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) NO3 NITRATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;291 K;26 % PEG 4000 500 mM Mg(NO3) 50 mM HEPES pH 7.5
Resolution 2.05 Å R-free 0.234
7A81 rsGreen0.7-K206A-F145A partially in the green-on state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;200 mM NaCl 100 mM MES pH 6.0 20 % PEG 6000 4% 2,2,2-trifluoroethanol
Resolution 1.70 Å R-free 0.248
7A82 rsGreen0.7-K206A-F145A partially in the green-off state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;200 mM NaCl 100 mM MES pH 6.0 20 % PEG 6000 200 mM NDSB-211
Resolution 1.90 Å R-free 0.250
7A83 rsGreen0.7-K206A-F145H in the green-on-state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) PGE TRIETHYLENE GLYCOL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;125 mM MES pH 6.0 9 % PEG 4000
Resolution 1.73 Å R-free 0.192
7A84 rsGreen0.7-K206A-F145H partially in the green-off state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM MES pH 6.0 14 % PEG 400 300 mM NGSB-195
Resolution 2.10 Å R-free 0.269
7A85 rsGreen0.7-K206A-F145L in the green-on state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) PGE TRIETHYLENE GLYCOL × 1 PEG DI(HYDROXYETHYL)ETHER × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM MES pH 6.5 12 % PEG 20 000 10 mM NaBr
Resolution 1.52 Å R-free 0.237
7A86 rsGreen0.7-K206A-F145L partially in the green-off state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM MES pH 6.5 12 % PEG 20 000 4 % Pentaerythritol ethoxylate
Resolution 1.90 Å R-free 0.210
7A86 rsGreen0.7-K206A-F145L partially in the green-off state Deposited 2020-08-30 Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) PGE TRIETHYLENE GLYCOL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM MES pH 6.5 12 % PEG 20 000 4 % Pentaerythritol ethoxylate
Resolution 1.90 Å R-free 0.210
7A87 rsGreen0.7-K206A-F145M in the green-on state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) PEG DI(HYDROXYETHYL)ETHER × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM Bis-tris pH 6.5 20 % PEG 1500
Resolution 1.75 Å R-free 0.228
7A88 rsGreen0.7-K206A-F145M in the green-off state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) PGE TRIETHYLENE GLYCOL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM MMT 25 % PEG 1500
Resolution 1.95 Å R-free 0.226
7A89 rsGreen0.7-K206A-F145Q in the green-on state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;22 % PEG 4000 140 mM Mg(NO3)2
Resolution 2.50 Å R-free 0.234
7A89 rsGreen0.7-K206A-F145Q in the green-on state Deposited 2020-08-30 Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;22 % PEG 4000 140 mM Mg(NO3)2
Resolution 2.50 Å R-free 0.234
7A8A rsGreen0.7-K206A-F145Q partially in the green-off state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;200 mM NaCl 100 mM MES pH 6.0 20 % PEG 6000
Resolution 1.93 Å R-free 0.254
7A8B rsGreen0.7-K206A-F145S partially in the green-on state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM MES pH 6.0 14 % PEG 4000
Resolution 1.55 Å R-free 0.232
7A8C rsGreen0.7-K206A-F145S in the green-off state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) PGE TRIETHYLENE GLYCOL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM MES pH 6.5 25 % PEG 4000 400 mM D-galactose
Resolution 2.13 Å R-free 0.253
7A8D rsGreen0.7-K206A-F165W partially in the green-on state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;291 K;200 mM NH4F 20 % PEG 3350
Resolution 1.65 Å R-free 0.219
7A8E rsGreen0.7-K206A-F165W partially in the green-off state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM HEPES pH 7.5 25 % PEG 4000
Resolution 2.20 Å R-free 0.261
7A8F rsGreen0.7-K206A-F165L in the green-on state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM HEPES pH 7.5 25 % PEG 4000
Resolution 2.27 Å R-free 0.257
7A8G rsGreen0.7-K206A-H148G in the green-on state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;200 mM TMAO 100mM Tris pH 8.5 20 % Peg 2000 mme
Resolution 2.00 Å R-free 0.217
7A8G rsGreen0.7-K206A-H148G in the green-on state Deposited 2020-08-30 Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) PGE TRIETHYLENE GLYCOL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;200 mM TMAO 100mM Tris pH 8.5 20 % Peg 2000 mme
Resolution 2.00 Å R-free 0.217
7A8H rsGreen0.7-K206A-H148S in the green-on state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM Bis-tris pH 6.5 20 % PEG 5000 mme
Resolution 1.70 Å R-free 0.209
7A8H rsGreen0.7-K206A-H148S in the green-on state Deposited 2020-08-30 Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM Bis-tris pH 6.5 20 % PEG 5000 mme
Resolution 1.70 Å R-free 0.209
7A8H rsGreen0.7-K206A-H148S in the green-on state Deposited 2020-08-30 Assembly 3 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain C 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) EDO 1,2-ETHANEDIOL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM Bis-tris pH 6.5 20 % PEG 5000 mme
Resolution 1.70 Å R-free 0.209
7A8H rsGreen0.7-K206A-H148S in the green-on state Deposited 2020-08-30 Assembly 4 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain D 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM Bis-tris pH 6.5 20 % PEG 5000 mme
Resolution 1.70 Å R-free 0.209
7A8I rsGreen0.7-K206A-H148S partially in the green-off state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM Bis-tris pH 6.5 20 % PEG 5000 mme
Resolution 2.00 Å R-free 0.228
7A8I rsGreen0.7-K206A-H148S partially in the green-off state Deposited 2020-08-30 Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM Bis-tris pH 6.5 20 % PEG 5000 mme
Resolution 2.00 Å R-free 0.228
7A8I rsGreen0.7-K206A-H148S partially in the green-off state Deposited 2020-08-30 Assembly 3 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain C 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM Bis-tris pH 6.5 20 % PEG 5000 mme
Resolution 2.00 Å R-free 0.228
7A8I rsGreen0.7-K206A-H148S partially in the green-off state Deposited 2020-08-30 Assembly 4 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain D 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM Bis-tris pH 6.5 20 % PEG 5000 mme
Resolution 2.00 Å R-free 0.228
7A8J rsGreen0.7-K206A-H148V in the green-on state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) GOL GLYCEROL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM MES pH 6.5 25 % PEG 550 mme 10 mM ZnSO4
Resolution 1.85 Å R-free 0.232
7A8K rsGreen0.7-K206A-H148V partially in the green-off state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) PEG DI(HYDROXYETHYL)ETHER × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;50 mM HEPES pH 7.5 12 % PEG 4000 1% tryptone
Resolution 2.25 Å R-free 0.263
7A8L rsGreen0.7-K206A-N205C in the green-on state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM MES pH 6.5 25 % PEG 3000
Resolution 1.75 Å R-free 0.225
7A8M rsGreen0.7-K206A-N205G in the green-on state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM MES pH 6.0 20 % PEG 2000 mme 10 mM BaCl2
Resolution 1.60 Å R-free 0.245
7A8N rsGreen0.7-K206A-N205L in the green-on state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;100 mM HEPES pH 7.5 25 % PEG 8000
Resolution 2.10 Å R-free 0.258
7A8O rsGreen0.7-K206A-N205S in the green-on state Deposited 2020-08-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) EDO 1,2-ETHANEDIOL × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;200 mM Maic acid pH 7.0 20 % PEG 3350
Resolution 1.60 Å R-free 0.201
7BWN Crystal Structure of a Designed Protein Heterocatenane Deposited 2020-04-15 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain F 1–238(238 aa)
Mutation:R2S,S30R,A72S,Q80R,A206V,M340E,L344K No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 5.5;298.15 K;Bis-Tris, (NH4)2SO4
Resolution 2.40 Å R-free 0.239
7BWN Crystal Structure of a Designed Protein Heterocatenane Deposited 2020-04-15 Assembly 2 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 1–238(238 aa)
Mutation:R2S,S30R,A72S,Q80R,A206V,M340E,L344K No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 5.5;298.15 K;Bis-Tris, (NH4)2SO4
Resolution 2.40 Å R-free 0.239
7BWN Crystal Structure of a Designed Protein Heterocatenane Deposited 2020-04-15 Assembly 3 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain C 1–238(238 aa)
Mutation:R2S,S30R,A72S,Q80R,A206V,M340E,L344K No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 5.5;298.15 K;Bis-Tris, (NH4)2SO4
Resolution 2.40 Å R-free 0.239
7BWN Crystal Structure of a Designed Protein Heterocatenane Deposited 2020-04-15 Assembly 4 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain E 1–238(238 aa)
Mutation:R2S,S30R,A72S,Q80R,A206V,M340E,L344K No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 5.5;298.15 K;Bis-Tris, (NH4)2SO4
Resolution 2.40 Å R-free 0.239
7BWN Crystal Structure of a Designed Protein Heterocatenane Deposited 2020-04-15 Assembly 5 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain H 1–238(238 aa)
Mutation:R2S,S30R,A72S,Q80R,A206V,M340E,L344K No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 5.5;298.15 K;Bis-Tris, (NH4)2SO4
Resolution 2.40 Å R-free 0.239
7BWN Crystal Structure of a Designed Protein Heterocatenane Deposited 2020-04-15 Assembly 6 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain J 1–238(238 aa)
Mutation:R2S,S30R,A72S,Q80R,A206V,M340E,L344K No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 5.5;298.15 K;Bis-Tris, (NH4)2SO4
Resolution 2.40 Å R-free 0.239
7BWN Crystal Structure of a Designed Protein Heterocatenane Deposited 2020-04-15 Assembly 7 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain M 1–238(238 aa)
Mutation:R2S,S30R,A72S,Q80R,A206V,M340E,L344K No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 5.5;298.15 K;Bis-Tris, (NH4)2SO4
Resolution 2.40 Å R-free 0.239
7BWN Crystal Structure of a Designed Protein Heterocatenane Deposited 2020-04-15 Assembly 8 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain O 1–238(238 aa)
Mutation:R2S,S30R,A72S,Q80R,A206V,M340E,L344K No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 5.5;298.15 K;Bis-Tris, (NH4)2SO4
Resolution 2.40 Å R-free 0.239
7E53 Crystal structure of sfGFP complexed with the nanobody nb2 at 2.2 Angstron resolution Deposited 2021-02-16 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 3–232(230 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;30% (w/v) Polyethylene glycol 400, 100mM CAPS/ Sodium hydroxide, pH 10.5
Resolution 2.21 Å R-free 0.258
8DHY N-terminal fragment of MsbA fused to GFP in complex with copper(II) Deposited 2022-06-28 Assembly 1 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–239(237 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) CU COPPER (II) ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;70% Tacsimate pH 7.0
Resolution 2.15 Å R-free 0.228
8GW6 AtSLAC1 6D mutant in closed state Deposited 2022-09-16 Assembly 1 Insufficient information Homooligomer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain A 1–240(240 aa)
Chain B 1–240(240 aa)
Chain C 1–240(240 aa)
Mutation:T62D,S65D,S107D,S124D,S146D,T152D Mutation:T62D,S65D,S107D,S124D,S146D,T152D Mutation:T62D,S65D,S107D,S124D,S146D,T152D CL CHLORIDE ION × 3 Y01 CHOLESTEROL HEMISUCCINATE × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8GW7 AtSLAC1 6D mutant in open state Deposited 2022-09-16 Assembly 1 Insufficient information Homooligomer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain A 1–240(240 aa)
Chain B 1–240(240 aa)
Chain C 1–240(240 aa)
Mutation:T62D,S65D,S107D,S124D,S146D,T152D Mutation:T62D,S65D,S107D,S124D,S146D,T152D Mutation:T62D,S65D,S107D,S124D,S146D,T152D CL CHLORIDE ION × 6 Y01 CHOLESTEROL HEMISUCCINATE × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8J6M SIDT1 protein Deposited 2023-04-26 Assembly 1 Insufficient information Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 3–236(234 aa)
Chain B 3–236(234 aa)
Not recorded CLR CHOLESTEROL × 8 ZN ZINC ION × 2 NA SODIUM ION × 1 OLA OLEIC ACID × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.77 Å
8J6O transport T2 Deposited 2023-04-26 Assembly 1 Insufficient information Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 3–236(234 aa)
Chain B 3–236(234 aa)
Not recorded NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 4 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.25 Å
8J7M ion channel Deposited 2023-04-27 Assembly 1 Insufficient information Homooligomer;Protein × 4 PDB declaration: tetrameric(4) Consistent with protein count
Chain A 3–235(233 aa)
Chain B 3–235(233 aa)
Chain C 3–235(233 aa)
Chain D 3–235(233 aa)
Not recorded POV (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate × 4 CLR CHOLESTEROL × 10 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8RL9 RECQL5:sfGFP hetero dimer assembled by Di-Gluebody Deposited 2024-01-02 Assembly 1 Protein heterocomplex Heteromer;Protein × 4 PDB declaration: tetrameric(4) Consistent with protein count
Chain B 1–238(238 aa)
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.22 Å
8RLB RECQL5:sfGFP hetero dimer assembled by Di-Gluebody - sfGFP local refinement Deposited 2024-01-02 Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain B 1–238(238 aa)
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.99 Å
8RLC SPNS2:sfGFP hetero dimer assembled by Di-Gluebody Deposited 2024-01-02 Assembly 1 Protein heterocomplex Heteromer;Protein × 4 PDB declaration: tetrameric(4) Consistent with protein count
Chain B 1–238(238 aa)
Not recorded LMT DODECYL-BETA-D-MALTOSIDE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.90 Å
8RLE SPNS2:sfGFP hetero dimer assembled by Di-Gluebody - sfGFP local refinement Deposited 2024-01-02 Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain B 1–238(238 aa)
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.75 Å
8UBG DpHF19 filament Deposited 2023-09-22 Assembly 1 Protein homooligomer Homooligomer;Protein × 20 PDB declaration: 20-meric(20) Consistent with protein count
Chain A 3–238(236 aa)
Chain B 3–238(236 aa)
Chain C 3–238(236 aa)
Chain D 3–238(236 aa)
Chain E 3–238(236 aa)
Chain F 3–238(236 aa)
Chain G 3–238(236 aa)
Chain H 3–238(236 aa)
Chain I 3–238(236 aa)
Chain J 3–238(236 aa)
Chain K 3–238(236 aa)
Chain L 3–238(236 aa)
Chain M 3–238(236 aa)
Chain N 3–238(236 aa)
Chain O 3–238(236 aa)
Chain P 3–238(236 aa)
Chain Q 3–238(236 aa)
Chain R 3–238(236 aa)
Chain S 3–238(236 aa)
Chain T 3–238(236 aa)
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å
8XAL Cryo-EM structure of SARS-CoV-2 S-BQ.1 in complex with ACE2 Deposited 2023-12-04 Assembly 1 Insufficient information Heteromer;Protein × 5 PDB declaration: pentameric(5) Consistent with protein count
Chain I 3–238(236 aa)
Chain J 3–238(236 aa)
Not recorded NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 31 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
Resolution 3.20 Å
9BCF Chimeric protein of crocodile allergen Cro p 1.0101 and GFP Deposited 2024-04-09 Assembly 1 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;298 K;0.2 M calcium acetate, 0.1 M sodium cacodylate pH 6.5, 40% v/v PEG 300
Resolution 3.20 Å R-free 0.238
9BCF Chimeric protein of crocodile allergen Cro p 1.0101 and GFP Deposited 2024-04-09 Assembly 2 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) CA CALCIUM ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;298 K;0.2 M calcium acetate, 0.1 M sodium cacodylate pH 6.5, 40% v/v PEG 300
Resolution 3.20 Å R-free 0.238
9BCF Chimeric protein of crocodile allergen Cro p 1.0101 and GFP Deposited 2024-04-09 Assembly 3 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain C 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;298 K;0.2 M calcium acetate, 0.1 M sodium cacodylate pH 6.5, 40% v/v PEG 300
Resolution 3.20 Å R-free 0.238
9C74 superfolder Green Fluorescent Protein with meta-nitro-tyrosine incorporated at position 66 Deposited 2024-06-10 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 1–238(238 aa)
Mutation:Y66mNO2Y Non-standard monomer:Yes (specific site not provided by mmCIF) NA SODIUM ION × 3 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 7;298 K;1% tryptone, 0.001 M NaN3, 0.05 M Hepes pH 7.0, 20% w/v PEG350
Resolution 1.51 Å R-free 0.220
9IRV MultiBody Refinement of dimeric DARPin and its bound GFP on a symmetric scaffold Deposited 2024-07-16 Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain C 1–231(231 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.47 Å
9J48 GFP bound to 24-mer DARPin-apoferritin model 6c Deposited 2024-08-09 Assembly 1 Protein heterocomplex Heteromer;Protein × 48 PDB declaration: 48-meric(48) Consistent with protein count
Chain a 1–231(231 aa)
Chain b 1–231(231 aa)
Chain c 1–231(231 aa)
Chain d 1–231(231 aa)
Chain e 1–231(231 aa)
Chain f 1–231(231 aa)
Chain g 1–231(231 aa)
Chain h 1–231(231 aa)
Chain i 1–231(231 aa)
Chain j 1–231(231 aa)
Chain k 1–231(231 aa)
Chain l 1–231(231 aa)
Chain m 1–231(231 aa)
Chain n 1–231(231 aa)
Chain o 1–231(231 aa)
Chain p 1–231(231 aa)
Chain q 1–231(231 aa)
Chain r 1–231(231 aa)
Chain s 1–231(231 aa)
Chain t 1–231(231 aa)
Chain v 1–231(231 aa)
Chain w 1–231(231 aa)
Chain x 1–231(231 aa)
Chain y 1–231(231 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.04 Å
9N6A GP23 C-termimal receptor binding domain from TM4 phage Deposited 2025-02-05 Assembly 1 Insufficient information Homooligomer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain A 1–238(238 aa)
Not recorded SO4 SULFATE ION × 6 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION;289 K;0.2 M Lithium Sulfate 0.1 M MES: NaOH, pH 6 20 % (v/v) 1,4-Butanediol
Resolution 2.91 Å R-free 0.280
9V85 Superfolder GFP fused gp38 receptor binding domain of bacteriophage PP01 Deposited 2025-05-29 Assembly 1 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;293.15 K;10% (w/v) PEG8000, 0.1M Na-HEPES-MOPS, pH7.5, 3mM CaCl2, 3mM MgCl2, 20 % (v/v) ethylene glycol
Resolution 2.10 Å R-free 0.208
9V85 Superfolder GFP fused gp38 receptor binding domain of bacteriophage PP01 Deposited 2025-05-29 Assembly 2 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain C 3–238(236 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;293.15 K;10% (w/v) PEG8000, 0.1M Na-HEPES-MOPS, pH7.5, 3mM CaCl2, 3mM MgCl2, 20 % (v/v) ethylene glycol
Resolution 2.10 Å R-free 0.208
9ZG5 Structure of superfolder GFP bound to nanobody 15 Deposited 2025-12-02 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 3–239(237 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 3.40 Å R-free 0.331
9ZG5 Structure of superfolder GFP bound to nanobody 15 Deposited 2025-12-02 Assembly 2 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain B 3–239(237 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 3.40 Å R-free 0.331
9ZG5 Structure of superfolder GFP bound to nanobody 15 Deposited 2025-12-02 Assembly 3 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain E 3–239(237 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 3.40 Å R-free 0.331
9ZG5 Structure of superfolder GFP bound to nanobody 15 Deposited 2025-12-02 Assembly 4 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain G 3–239(237 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 3.40 Å R-free 0.331