Current Protein Identity：P49951
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Difference tags compare only the current result set; every original PDB and assembly record remains separate.
Related-Structure Differences
Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.
| PDB Entry | Assembly / Oligomeric State | Construct | Mutations and Modifications | Ligands, Ions and Non-polymers | Experimental Method | Experimental Conditions | Structure Quality |
|---|---|---|---|---|---|---|---|
| 1B89 CLATHRIN HEAVY CHAIN PROXIMAL LEG SEGMENT (BOVINE) Deposited 1999-05-27 | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
1074–1522（449 aa）
Fragment：PROXIMAL LEG
|
Non-standard monomer：Yes (specific site not provided by mmCIF) | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
pH 8；250 MM SODIUM FORMATE, 100 MM TRIS-HCL, PH 8, pH 8.0
|
Resolution 2.60 Å R-free 0.279 |
| 1UTC Clathrin terminal domain complexed with TLPWDLWTT Deposited 2003-12-08 | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
1–363（363 aa）
Fragment：TERMINAL DOMAIN, RESIDUES 1-363
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 9；VAPOUR DIFFUSION OVER A RESERVOIR CONTAINING 20% PEG8000, 200 MM MGCL2, 4 MM DTT,100 MM CAPS PH 9, DRIED UP DROP
|
Resolution 2.30 Å R-free 0.253 |
| 1UTC Clathrin terminal domain complexed with TLPWDLWTT Deposited 2003-12-08 | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain B
1–363（363 aa）
Fragment：TERMINAL DOMAIN, RESIDUES 1-363
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 9；VAPOUR DIFFUSION OVER A RESERVOIR CONTAINING 20% PEG8000, 200 MM MGCL2, 4 MM DTT,100 MM CAPS PH 9, DRIED UP DROP
|
Resolution 2.30 Å R-free 0.253 |
| 1XI4 Clathrin D6 Coat Deposited 2004-09-21 | Assembly 1 Protein heterocomplex Heteromer；Protein × 216 PDB declaration: 216-MERIC（216） Consistent with protein count |
Chain A
1–1630（1630 aa）
Fragment：residues 1-1630
Chain B
1–1630（1630 aa）
Fragment：residues 1-1630
Chain C
1–1630（1630 aa）
Fragment：residues 1-1630
Chain D
1–1630（1630 aa）
Fragment：residues 1-1630
Chain E
1–1630（1630 aa）
Fragment：residues 1-1630
Chain F
1–1630（1630 aa）
Fragment：residues 1-1630
Chain G
1–1630（1630 aa）
Fragment：residues 1-1630
Chain H
1–1630（1630 aa）
Fragment：residues 1-1630
Chain I
1–1630（1630 aa）
Fragment：residues 1-1630
|
Not recorded | No recorded non-water small molecule | ELECTRON MICROSCOPY |
cryo-EM buffer
25mM MES；pH 6.5；25mM MES
cryo-EM vitrification conditions
Cryogen ETHANE；VITRIFIED
|
Resolution 7.90 Å |
| 1XI4 Clathrin D6 Coat Deposited 2004-09-21 | Assembly 2 Protein heterocomplex Heteromer；Protein × 18 PDB declaration: octadecameric（18） Consistent with protein count |
Chain A
1–1630（1630 aa）
Fragment：residues 1-1630
Chain B
1–1630（1630 aa）
Fragment：residues 1-1630
Chain C
1–1630（1630 aa）
Fragment：residues 1-1630
Chain D
1–1630（1630 aa）
Fragment：residues 1-1630
Chain E
1–1630（1630 aa）
Fragment：residues 1-1630
Chain F
1–1630（1630 aa）
Fragment：residues 1-1630
Chain G
1–1630（1630 aa）
Fragment：residues 1-1630
Chain H
1–1630（1630 aa）
Fragment：residues 1-1630
Chain I
1–1630（1630 aa）
Fragment：residues 1-1630
|
Not recorded | No recorded non-water small molecule | ELECTRON MICROSCOPY |
cryo-EM buffer
25mM MES；pH 6.5；25mM MES
cryo-EM vitrification conditions
Cryogen ETHANE；VITRIFIED
|
Resolution 7.90 Å |
| 1XI4 Clathrin D6 Coat Deposited 2004-09-21 | Assembly 3 Protein heterocomplex Heteromer；Protein × 18 PDB declaration: octadecameric（18） Consistent with protein count |
Chain A
1–1630（1630 aa）
Fragment：residues 1-1630
Chain B
1–1630（1630 aa）
Fragment：residues 1-1630
Chain C
1–1630（1630 aa）
Fragment：residues 1-1630
Chain D
1–1630（1630 aa）
Fragment：residues 1-1630
Chain E
1–1630（1630 aa）
Fragment：residues 1-1630
Chain F
1–1630（1630 aa）
Fragment：residues 1-1630
Chain G
1–1630（1630 aa）
Fragment：residues 1-1630
Chain H
1–1630（1630 aa）
Fragment：residues 1-1630
Chain I
1–1630（1630 aa）
Fragment：residues 1-1630
|
Not recorded | No recorded non-water small molecule | ELECTRON MICROSCOPY |
cryo-EM buffer
25mM MES；pH 6.5；25mM MES
cryo-EM vitrification conditions
Cryogen ETHANE；VITRIFIED
|
Resolution 7.90 Å |
| 1XI5 Clathrin D6 coat with auxilin J-domain Deposited 2004-09-21 | Assembly 1 Protein heterocomplex Heteromer；Protein × 216 PDB declaration: 216-MERIC（216） Consistent with protein count |
Chain A
1–1630（1630 aa）
Fragment：residues 1-1630
Chain B
1–1630（1630 aa）
Fragment：residues 1-1630
Chain C
1–1630（1630 aa）
Fragment：residues 1-1630
Chain D
1–1630（1630 aa）
Fragment：residues 1-1630
Chain E
1–1630（1630 aa）
Fragment：residues 1-1630
Chain F
1–1630（1630 aa）
Fragment：residues 1-1630
Chain G
1–1630（1630 aa）
Fragment：residues 1-1630
Chain H
1–1630（1630 aa）
Fragment：residues 1-1630
Chain I
1–1630（1630 aa）
Fragment：residues 1-1630
|
Not recorded | No recorded non-water small molecule | ELECTRON MICROSCOPY |
cryo-EM buffer
20MM HEPES；pH 7；20MM HEPES
cryo-EM vitrification conditions
Cryogen ETHANE；VITRIFIED
|
Resolution 12.00 Å |
| 1XI5 Clathrin D6 coat with auxilin J-domain Deposited 2004-09-21 | Assembly 2 Protein heterocomplex Heteromer；Protein × 18 PDB declaration: octadecameric（18） Consistent with protein count |
Chain A
1–1630（1630 aa）
Fragment：residues 1-1630
Chain B
1–1630（1630 aa）
Fragment：residues 1-1630
Chain C
1–1630（1630 aa）
Fragment：residues 1-1630
Chain D
1–1630（1630 aa）
Fragment：residues 1-1630
Chain E
1–1630（1630 aa）
Fragment：residues 1-1630
Chain F
1–1630（1630 aa）
Fragment：residues 1-1630
Chain G
1–1630（1630 aa）
Fragment：residues 1-1630
Chain H
1–1630（1630 aa）
Fragment：residues 1-1630
Chain I
1–1630（1630 aa）
Fragment：residues 1-1630
|
Not recorded | No recorded non-water small molecule | ELECTRON MICROSCOPY |
cryo-EM buffer
20MM HEPES；pH 7；20MM HEPES
cryo-EM vitrification conditions
Cryogen ETHANE；VITRIFIED
|
Resolution 12.00 Å |
| 1XI5 Clathrin D6 coat with auxilin J-domain Deposited 2004-09-21 | Assembly 3 Protein heterocomplex Heteromer；Protein × 18 PDB declaration: octadecameric（18） Consistent with protein count |
Chain A
1–1630（1630 aa）
Fragment：residues 1-1630
Chain B
1–1630（1630 aa）
Fragment：residues 1-1630
Chain C
1–1630（1630 aa）
Fragment：residues 1-1630
Chain D
1–1630（1630 aa）
Fragment：residues 1-1630
Chain E
1–1630（1630 aa）
Fragment：residues 1-1630
Chain F
1–1630（1630 aa）
Fragment：residues 1-1630
Chain G
1–1630（1630 aa）
Fragment：residues 1-1630
Chain H
1–1630（1630 aa）
Fragment：residues 1-1630
Chain I
1–1630（1630 aa）
Fragment：residues 1-1630
|
Not recorded | No recorded non-water small molecule | ELECTRON MICROSCOPY |
cryo-EM buffer
20MM HEPES；pH 7；20MM HEPES
cryo-EM vitrification conditions
Cryogen ETHANE；VITRIFIED
|
Resolution 12.00 Å |
| 3GC3 Crystal Structure of Arrestin2S and Clathrin Deposited 2009-02-21 | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain B
1–363（363 aa）
Fragment：WD domain
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；100 mM bis_tris propane
4 -4.5 M ammonium acetate
4.5% ethylene glycol, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 2.20 Å R-free 0.251 |
| 3GD1 Structure of an Arrestin/Clathrin complex reveals a novel clathrin binding domain that modulates receptor trafficking Deposited 2009-02-23 | Assembly 3 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain I
1–363（363 aa）
Fragment：WD domain
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
pH 9；293 K；100mM Bicine, 7% O-(2-aminopropyl)-O'-(2-methoxyethyl)polypropylene glycol 500, 6% polyethylene glycol 8000, 4% acetone, 1% ethylene glycol and 10 mM strontium chloride, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
Resolution 3.50 Å R-free 0.254 |
| 3IYV Clathrin D6 coat as full-length Triskelions Deposited 2010-06-17 | Assembly 1 Protein heterocomplex Heteromer；Protein × 216 PDB declaration: 216-meric（216） Consistent with protein count |
Chain A
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain B
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain C
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain D
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain E
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain F
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain G
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain H
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain I
1–1630（1630 aa）
Fragment：UNP residues 1-1630
|
Not recorded | No recorded non-water small molecule | ELECTRON MICROSCOPY |
cryo-EM buffer
25MM MES；pH 6.5；25MM MES
cryo-EM vitrification conditions
Cryogen ETHANE；VITRIFIED
|
Resolution 7.90 Å |
| 3IYV Clathrin D6 coat as full-length Triskelions Deposited 2010-06-17 | Assembly 2 Protein heterocomplex Heteromer；Protein × 18 PDB declaration: octadecameric（18） Consistent with protein count |
Chain A
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain B
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain C
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain D
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain E
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain F
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain G
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain H
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain I
1–1630（1630 aa）
Fragment：UNP residues 1-1630
|
Not recorded | No recorded non-water small molecule | ELECTRON MICROSCOPY |
cryo-EM buffer
25MM MES；pH 6.5；25MM MES
cryo-EM vitrification conditions
Cryogen ETHANE；VITRIFIED
|
Resolution 7.90 Å |
| 3IYV Clathrin D6 coat as full-length Triskelions Deposited 2010-06-17 | Assembly 3 Protein heterocomplex Heteromer；Protein × 18 PDB declaration: octadecameric（18） Consistent with protein count |
Chain A
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain B
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain C
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain D
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain E
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain F
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain G
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain H
1–1630（1630 aa）
Fragment：UNP residues 1-1630
Chain I
1–1630（1630 aa）
Fragment：UNP residues 1-1630
|
Not recorded | No recorded non-water small molecule | ELECTRON MICROSCOPY |
cryo-EM buffer
25MM MES；pH 6.5；25MM MES
cryo-EM vitrification conditions
Cryogen ETHANE；VITRIFIED
|
Resolution 7.90 Å |
| 3LVG Crystal structure of a clathrin heavy chain and clathrin light chain complex Deposited 2010-02-20 | Assembly 1 Protein heterocomplex Heteromer；Protein × 6 PDB declaration: hexameric（6） Consistent with protein count |
Chain A
1074–1675（602 aa）
Chain B
1074–1675（602 aa）
Chain C
1074–1675（602 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；298 K；200mM citrate, 16-22% glycerol, 2% trifluoroethanol, vapor diffusion, hanging drop, temperature 298K
|
Resolution 7.94 Å R-free 0.425 |
| 3LVH Crystal structure of a clathrin heavy chain and clathrin light chain complex Deposited 2010-02-20 | Assembly 1 Protein heterocomplex Heteromer；Protein × 6 PDB declaration: hexameric（6） Consistent with protein count |
Chain A
1074–1675（602 aa）
Fragment：Hub
Chain B
1074–1675（602 aa）
Fragment：Hub
Chain C
1074–1675（602 aa）
Fragment：Hub
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；298 K；200mM citrate, 16-22% glycerol, 2% trifluoroethanol, vapor diffusion, hanging drop, temperature 298K
|
Resolution 9.00 Å R-free 0.487 |
| 3QIL Crystal structure analysis of the clathrin trimerization domain Deposited 2011-01-27 | Assembly 1 Protein homooligomer Homooligomer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain A
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
Chain B
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
Chain C
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
|
Mutation：C1528A, T1585L Mutation：C1528A, T1585L Mutation：C1528A, T1585L | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；NaCl, Imidazole, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 3.92 Å R-free 0.386 |
| 3QIL Crystal structure analysis of the clathrin trimerization domain Deposited 2011-01-27 | Assembly 2 Protein homooligomer Homooligomer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain D
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
Chain E
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
Chain F
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
|
Mutation：C1528A, T1585L Mutation：C1528A, T1585L Mutation：C1528A, T1585L | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；NaCl, Imidazole, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 3.92 Å R-free 0.386 |
| 3QIL Crystal structure analysis of the clathrin trimerization domain Deposited 2011-01-27 | Assembly 3 Protein homooligomer Homooligomer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain G
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
Chain H
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
Chain I
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
|
Mutation：C1528A, T1585L Mutation：C1528A, T1585L Mutation：C1528A, T1585L | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；NaCl, Imidazole, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 3.92 Å R-free 0.386 |
| 3QIL Crystal structure analysis of the clathrin trimerization domain Deposited 2011-01-27 | Assembly 4 Protein homooligomer Homooligomer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain J
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
Chain K
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
Chain L
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
|
Mutation：C1528A, T1585L Mutation：C1528A, T1585L Mutation：C1528A, T1585L | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；NaCl, Imidazole, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 3.92 Å R-free 0.386 |
| 3QIL Crystal structure analysis of the clathrin trimerization domain Deposited 2011-01-27 | Assembly 5 Protein homooligomer Homooligomer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain M
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
Chain N
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
Chain O
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
|
Mutation：C1528A, T1585L Mutation：C1528A, T1585L Mutation：C1528A, T1585L | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；NaCl, Imidazole, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 3.92 Å R-free 0.386 |
| 3QIL Crystal structure analysis of the clathrin trimerization domain Deposited 2011-01-27 | Assembly 6 Protein homooligomer Homooligomer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain P
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
Chain Q
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
Chain R
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
|
Mutation：C1528A, T1585L Mutation：C1528A, T1585L Mutation：C1528A, T1585L | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；NaCl, Imidazole, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 3.92 Å R-free 0.386 |
| 3QIL Crystal structure analysis of the clathrin trimerization domain Deposited 2011-01-27 | Assembly 7 Protein homooligomer Homooligomer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain S
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
Chain T
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
Chain U
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
|
Mutation：C1528A, T1585L Mutation：C1528A, T1585L Mutation：C1528A, T1585L | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；NaCl, Imidazole, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 3.92 Å R-free 0.386 |
| 3QIL Crystal structure analysis of the clathrin trimerization domain Deposited 2011-01-27 | Assembly 8 Protein homooligomer Homooligomer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain V
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
Chain W
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
Chain X
1521–1624（104 aa）
Fragment：CLATHRIN TRIMERIZATION DOMAIN
|
Mutation：C1528A, T1585L Mutation：C1528A, T1585L Mutation：C1528A, T1585L | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；NaCl, Imidazole, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 3.92 Å R-free 0.386 |
| 5M5R Clathrin heavy chain N-terminal domain bound to beta2 adaptin clathrin box motif Deposited 2016-10-22 | Assembly 1 Protein heterocomplex Heteromer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain A
1–363（363 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6.7；293 K；1 uL protein plus peptide mix (14 mg/mL NTD and 3.4 mM peptide) plus 2 uL reservoir equilibrated against a 200 uL reservoir of 0.94 M sodium malonate pH 6.7
|
Resolution 1.76 Å R-free 0.205 |
| 5M5S Clathrin heavy chain N-terminal domain bound to amphiphysin clathrin-box motif Deposited 2016-10-22 | Assembly 1 Protein heterocomplex Heteromer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain A
1–363（363 aa）
|
Not recorded | GOL GLYCEROL × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7.5；293 K；1 uL protein:peptide mix (14 mg/mL NTD and 3.4 mM peptide) plus 2 uL reservoir equilibrated against a 200 uL reservoir of 0.85 M sodium malonate pH 7.5
|
Resolution 1.88 Å R-free 0.234 |
| 5M5S Clathrin heavy chain N-terminal domain bound to amphiphysin clathrin-box motif Deposited 2016-10-22 | Assembly 2 Protein heterocomplex Heteromer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain B
1–363（363 aa）
|
Not recorded | GOL GLYCEROL × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7.5；293 K；1 uL protein:peptide mix (14 mg/mL NTD and 3.4 mM peptide) plus 2 uL reservoir equilibrated against a 200 uL reservoir of 0.85 M sodium malonate pH 7.5
|
Resolution 1.88 Å R-free 0.234 |
| 5M5T Clathrin heavy chain N-terminal domain bound to a non-natural clathrin-box motif peptide (Amph4T1) Deposited 2016-10-22 | Assembly 1 Protein heterocomplex Heteromer；Protein × 4 PDB declaration: tetrameric（4） Consistent with protein count |
Chain A
1–363（363 aa）
|
Not recorded | GOL GLYCEROL × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8；293 K；1 uL protein:peptide mix (14 mg/mL NTD and 3.4 mM peptide) plus 1 uL reservoir equilibrated against a 200 uL reservoir of 1.1 M sodium malonate pH 8.0
|
Resolution 1.70 Å R-free 0.185 |
| 5M5T Clathrin heavy chain N-terminal domain bound to a non-natural clathrin-box motif peptide (Amph4T1) Deposited 2016-10-22 | Assembly 2 Protein heterocomplex Heteromer；Protein × 4 PDB declaration: tetrameric（4） Consistent with protein count |
Chain B
1–363（363 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8；293 K；1 uL protein:peptide mix (14 mg/mL NTD and 3.4 mM peptide) plus 1 uL reservoir equilibrated against a 200 uL reservoir of 1.1 M sodium malonate pH 8.0
|
Resolution 1.70 Å R-free 0.185 |
| 5M5U Clathrin heavy chain N-terminal domain bound to a clathrin-box motif from hepatitis D virus large antigen (clade 1) Deposited 2016-10-22 | Assembly 1 Protein heterocomplex Heteromer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain A
1–363（363 aa）
|
Not recorded | GOL GLYCEROL × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7；293 K；400 nL protein:peptide mix (14 mg/mL NTD and 3.4 mM) plus 200 nL reservoir equilibrated against a 80 uL reservoir of 1.21 M sodium malonate pH 7.0
|
Resolution 2.15 Å R-free 0.207 |
| 5M5U Clathrin heavy chain N-terminal domain bound to a clathrin-box motif from hepatitis D virus large antigen (clade 1) Deposited 2016-10-22 | Assembly 2 Protein heterocomplex Heteromer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain B
1–363（363 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7；293 K；400 nL protein:peptide mix (14 mg/mL NTD and 3.4 mM) plus 200 nL reservoir equilibrated against a 80 uL reservoir of 1.21 M sodium malonate pH 7.0
|
Resolution 2.15 Å R-free 0.207 |
| 5M5V Clathrin heavy chain N-terminal domain bound to a clathrin-box motif from hepatitis D virus large antigen (clade 2) Deposited 2016-10-22 | Assembly 1 Protein heterocomplex Heteromer；Protein × 4 PDB declaration: tetrameric（4） Consistent with protein count |
Chain A
1–363（363 aa）
|
Not recorded | GOL GLYCEROL × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7；293 K；200 nL protein:peptide (20 mg/mL NTD and 3.6 mM peptide) plus 400 nL reservoir equilibrated against a 80 uL reservoir of 1.75 M sodium malonate pH 7.0
|
Resolution 1.96 Å R-free 0.193 |
| 5M5V Clathrin heavy chain N-terminal domain bound to a clathrin-box motif from hepatitis D virus large antigen (clade 2) Deposited 2016-10-22 | Assembly 2 Protein heterocomplex Heteromer；Protein × 4 PDB declaration: tetrameric（4） Consistent with protein count |
Chain B
1–363（363 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7；293 K；200 nL protein:peptide (20 mg/mL NTD and 3.6 mM peptide) plus 400 nL reservoir equilibrated against a 80 uL reservoir of 1.75 M sodium malonate pH 7.0
|
Resolution 1.96 Å R-free 0.193 |
| 5M61 Clathrin heavy chain N-terminal domain bound to an extended amphiphysin clathrin-box motif Deposited 2016-10-23 | Assembly 1 Protein heterocomplex Heteromer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain A
1–363（363 aa）
|
Not recorded | GOL GLYCEROL × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7.1；293 K；1 uL protein:peptide mix (14 mg/mL protein, 3.4 mM peptide) plus 2 uL of 1.04 M sodium malonate pH 7.1, 0.2 M sodium perchlorate equilibrated against a 200 uL reservoir of 1.15 M sodium malonate pH 7.1
|
Resolution 1.84 Å R-free 0.182 |
| 5M61 Clathrin heavy chain N-terminal domain bound to an extended amphiphysin clathrin-box motif Deposited 2016-10-23 | Assembly 2 Protein heterocomplex Heteromer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain B
1–363（363 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7.1；293 K；1 uL protein:peptide mix (14 mg/mL protein, 3.4 mM peptide) plus 2 uL of 1.04 M sodium malonate pH 7.1, 0.2 M sodium perchlorate equilibrated against a 200 uL reservoir of 1.15 M sodium malonate pH 7.1
|
Resolution 1.84 Å R-free 0.182 |
| 6WCJ Asymmetric vertex of the clathrin minicoat cage Deposited 2020-03-30 | Assembly 1 Protein heterocomplex Heteromer；Protein × 15 PDB declaration: pentadecameric（15） Consistent with protein count |
Chain A
1–1675（1675 aa）
Chain C
1–1675（1675 aa）
Chain D
1–1675（1675 aa）
Chain G
1–1675（1675 aa）
Chain H
1–1675（1675 aa）
Chain I
1–1675（1675 aa）
Chain K
1–1675（1675 aa）
Chain L
1–1675（1675 aa）
Chain M
1–1675（1675 aa）
|
Not recorded | No recorded non-water small molecule | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 6.7
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 6.30 Å |
| 9F8T Clathrin terminal domain complexed with C-terminus of AAK1L Deposited 2024-05-07 | Assembly 1 Protein heterocomplex Heteromer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain A
1–363（363 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 6；293.15 K；20% PEG 3,350; 100 mM Bis-Tris propane, pH 6.0; 200 mM sodium citrate; 10 mM DTT
|
Resolution 1.71 Å R-free 0.209 |