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Protein Structures and Oligomeric States

Enter a protein name, UniProt accession or PDB ID. Name searches ask you to confirm the protein identity before related structures are queried.

Current Protein Identity：P62242 New Search
14PDB entries
14Biological assembly
14chain/assembly records
Main Difference Dimensions in This Set
Different assembly state Different ligand/ion Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric（78） Consistent with all polymers
Chain SI 1–208（208 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric（78） Consistent with all polymers
Chain SI 1–208（208 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric（85） Consistent with all polymers
Chain u 1–208（208 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric（85） Consistent with all polymers
Chain u 1–208（208 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric（81） Consistent with all polymers
Chain SI 1–208（208 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric（80） Consistent with all polymers
Chain SI 1–208（208 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric（81） Consistent with all polymers
Chain SI 1–208（208 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric（81） Consistent with all polymers
Chain SI 1–208（208 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric（83） Review required
Chain u2 1–208（208 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric（83） Consistent with all polymers
Chain u2 1–208（208 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric（82） Consistent with all polymers
Chain u2 1–208（208 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric（82） Consistent with all polymers
Chain u2 1–208（208 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric（82） Consistent with all polymers
Chain u2 1–208（208 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric（85） Consistent with all polymers
Chain u2 1–208（208 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

This page presents structural evidence recorded in PDB/mmCIF.“No recorded non-water small molecule” does not prove that the experimental sample was ligand-free; experimental conditions belong to the PDB experiment, while ligands and copy counts are shown for each biological assembly.