INTRON ENCODED HOMING ENDONUCLEASE I-PPOI (H98A)/DNA HOMING SITE COMPLEX

entry_id	1cyq
deposition_date	1999-08-31
title	INTRON ENCODED HOMING ENDONUCLEASE I-PPOI (H98A)/DNA HOMING SITE COMPLEX
keywords	PROTEIN-DNA COMPLEX, DISTORTED DNA, HIS-CYS BOX ZINC BINDING SITE, BETA SHEET DNA BINDING, HYDROLASE-DNA COMPLEX; HYDROLASE/DNA
method	X-RAY DIFFRACTION

rg_guinier	24.83 Å
rg_electron	24.58 Å
i0	55062700.00
molecular_weight	48377.0 kDa
excluded_volume	56312 ų
envelope_volume	71265 ų
shell_volume	24750 ų
envelope_diameter	80.8 Å
shell_rg	31.29 Å
envelope_rg	24.60 Å
shape_rg	24.59 Å
total_rg	25.18 Å
total_atoms	3340
n_residues	366
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	78.2 Å
rg_real	24.86 Å
rg_real_error	0.49 Å
i0_real	5.5060e+07
i0_real_error	8.0320e+05
rg_reciprocal	24.85 Å
i0_reciprocal	55060000.0000
total_estimate	0.9036
solution_quality	EXCELLENT a EXCELLENT solution
n_peaks	2
r_peak_primary	27.3 Å
skewness	0.347
kurtosis	-0.487
angular_range	— – 0.3200 Å−1
current_alpha	0.0000
highest_alpha	5810000.0000
n_real_points	64
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.936; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.966; Smooth: 0.968

Unit Cell

length_a	113.866 Å
length_b	113.866 Å
length_c	89.040 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	120.00 °
z_pdb	12

Symmetry

space_group	P 31 2 1
int_tables_number	152
crystal_system	—

Refinement

resolution	1.930 Å
resolution_low	50.000 Å
r_factor	0.2040
r_work	0.2040
r_free	0.2350

Diffraction

temperature

100.0 K

Files (7)

• pr_distribution /app/data/pr_computation/cy/1cyq/pr_distribution.json
• pr_output /app/data/pr_computation/cy/1cyq/1cyq.pr.out
• pr_plot /app/data/visualization/pr_computation/cy/1cyq/1cyq_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/cy/1cyq/1cyq.dat
• saxs_fit /app/data/saxs_computation/cy/1cyq/1cyq.fit
• saxs_log /app/data/saxs_computation/cy/1cyq/1cyq.log
• saxs_plot /app/data/visualization/saxs_computation/cy/1cyq/1cyq_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/cy/1cyq/1cyq.fit
pddf	/app/data/pr_computation/cy/1cyq/1cyq.pr.out
profile	/app/data/saxs_computation/cy/1cyq/1cyq.dat