STAPHYLOCOCCAL PROTEIN A
Staphylococcus aureus
State in the Current Structure
| Assembly | Oligomeric State | Construct | Mutations and Modifications | Ligands, Ions and Associated Components | Method and Experimental Conditions | Structure Quality |
|---|---|---|---|---|---|---|
| 1 | Protein monomer Monomer Protein × 1 PDB declaration: monomeric（1） Consistent with protein copy count | Chain A； UniProt 37–92 | Fragment：E-DOMAIN (180) | No other associated polymer | SOLUTION NMR NMR measurement conditions：pH 5.7；298 K | Resolution not provided |
Other States of the Same Protein in the Database
Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.
| Other PDB | Difference from Current Entry 1EDJ | Assembly / Oligomeric State | Construct | Mutations and Modifications | Ligands, Ions and Non-polymers | Method and Experimental Conditions | Structure Quality |
|---|---|---|---|---|---|---|---|
| 1BDC STAPHYLOCOCCUS AUREUS PROTEIN A, IMMUNOGLOBULIN-BINDING B DOMAIN, NMR, 10 STRUCTURES Deposited 1996-06-28 | Different construct Different experimental conditions | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
212–270（59 aa）
Fragment：B DOMAIN
|
Not recorded | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 5；303 K
|
Resolution not provided |
| 1BDD STAPHYLOCOCCUS AUREUS PROTEIN A, IMMUNOGLOBULIN-BINDING B DOMAIN, NMR, MINIMIZED AVERAGE STRUCTURE Deposited 1996-06-28 | Different construct Different experimental conditions | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
212–270（59 aa）
Fragment：B DOMAIN
|
Not recorded | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 5；303 K
|
Resolution not provided |
| 1EDI STAPHYLOCOCCAL PROTEIN A E-DOMAIN (180), NMR, MINIMIZED AVERAGE STRUCTURE Deposited 1996-10-07 | Different construct | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
37–92（56 aa）
Fragment：E-DOMAIN
|
Not recorded | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 5.7；298 K
|
Resolution not provided |
| 1EDK STAPHYLOCOCCAL PROTEIN A E-DOMAIN (-60), NMR, MINIMIZED AVERAGE STRUCTURE Deposited 1996-07-22 | Different construct | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
37–92（56 aa）
Fragment：E-DOMAIN
|
Not recorded | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 5.7；298 K
|
Resolution not provided |
| 1EDL STAPHYLOCOCCAL PROTEIN A E-DOMAIN (-60), NMR, 22 STRUCTURES Deposited 1996-07-22 | Different construct | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
37–92（56 aa）
Fragment：E-DOMAIN
|
Not recorded | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 5.7；298 K
|
Resolution not provided |
| 1LP1 Protein Z in complex with an in vitro selected affibody Deposited 2002-05-07 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain B
212–269（58 aa）
Fragment：RESIDUES 2-58
|
Mutation：A1V, G29A | SO4 SULFATE ION × 4 MG MAGNESIUM ION × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6.5；298 K；MgSO4, MES, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
|
Resolution 2.30 Å R-free 0.256 |
| 1LP1 Protein Z in complex with an in vitro selected affibody Deposited 2002-05-07 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein heterocomplex Heteromer；Protein × 4 PDB declaration: tetrameric |
Chain B
212–269（58 aa）
Fragment：RESIDUES 2-58
|
Mutation：A1V, G29A | SO4 SULFATE ION × 8 MG MAGNESIUM ION × 2 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6.5；298 K；MgSO4, MES, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
|
Resolution 2.30 Å R-free 0.256 |
| 1Q2N REFINED Solution NMR structure of the Z domain of STAPHYLOCOCCAL PROTEIN A Deposited 2003-07-25 | Different construct Different experimental conditions | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
212–269（58 aa）
Fragment：residues 212-269
|
Not recorded | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 6.5；303 K；Ionic strength (raw mmCIF value) 20 mM NH4OAc；Pressure 1
NMR sample composition
1mM Z domain U-15N,13C; 20mM NH4OAc buffer; 95% H2O, 5% D2O. | 95% H2O/5% D2O
|
Resolution not provided |
| 1SS1 STAPHYLOCOCCAL PROTEIN A, B-DOMAIN, Y15W MUTANT, NMR, 25 STRUCTURES Deposited 2004-03-23 | Different construct Different mutation/modification Different experimental conditions | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
212–270（59 aa）
Fragment：B DOMAIN
|
Mutation：Y15W | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 5.5；298 K；Ionic strength (raw mmCIF value) 100 mM NaCl / 50 mM acetate；Pressure ambient
NMR sample composition
2mM sample, U-13C, U-15N; 50 mM D-acetate buffer, 100 mM NaCl, pH 5.5; 90% H2O, 10% D2O | 90% H20, 10% D20
|
Resolution not provided |
| 2JWD protein A Deposited 2007-10-09 | Different construct Different mutation/modification Different experimental conditions | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
213–269（57 aa）
Fragment：B domain
|
Mutation：Y15W | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 5；298 K；Ionic strength (raw mmCIF value) 100；Pressure ambient
NMR sample composition
20mM sodium acetate, 100mM sodium chloride, 90% H2O/10% D2O | 90% H2O/10% D2O
|
Resolution not provided |
| 2M5A Protein A binding by an engineered Affibody molecule Deposited 2013-02-19 | Different construct Different oligomeric state Different experimental conditions | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
213–269（57 aa）
|
Not recorded | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 5.6；298 K；Ionic strength (raw mmCIF value) 0.095；Pressure ambient
NMR sample composition
0.5 to 1 mM [U-99% 13C; U-99% 15N] Z domain, 25% molar excess mM ZpA963, 93% H2O/7% D2O | 93% H2O/7% D2O
NMR sample composition
0.5 to 1.0 mM [U-99% 13C; U-99% 15N] ZpA963, 25 5 molar excess mM Z domain, 93% H2O/7% D2O | 93% H2O/7% D2O
|
Resolution not provided |
| 2SPZ STAPHYLOCOCCAL PROTEIN A, Z-DOMAIN, NMR, 10 STRUCTURES Deposited 1998-07-29 | Different construct Different mutation/modification Different experimental conditions | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
212–269（58 aa）
Fragment：Z DOMAIN
|
Mutation：A1V, G29A | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 6.5；303 K；Ionic strength (raw mmCIF value) 10 MILLIMOLAR K2HPO4；Pressure 1
|
Resolution not provided |
| 3MZW HER2 extracelluar region with affinity matured 3-helix affibody ZHER2:342 Deposited 2010-05-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Other combination Heteromer；Protein × 2 PDB declaration: dimeric |
Chain B
212–269（58 aa）
Fragment：B 4 repeat domain residues 212-269
|
Mutation：A212V, Q220M, Q221R, F224Y, Y225W, L228A, H229L, E235N, E236Q, R238K, N239R, G240A, Q243R, K246Y | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 5；279 K；0.05M sodium chloride, 7.5% PEG3350, 0.1M ammonium acetate, VAPOR DIFFUSION, HANGING DROP, temperature 279K
|
Resolution 2.90 Å R-free 0.278 |
| 4NPD High-resolution structure of C domain of staphylococcal protein A at cryogenic temperature Deposited 2013-11-21 | Different construct Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
270–327（58 aa）
Fragment：UNP residues 270-327
|
Not recorded | ZN ZINC ION × 2 SCN THIOCYANATE ION × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7；298 K；Na Thiocyanate, PEG 3350, Glycerol, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 298K
|
Resolution 0.90 Å R-free 0.130 |
| 4NPE High-resolution structure of C domain of staphylococcal protein A at room temperature Deposited 2013-11-21 | Different construct Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
270–327（58 aa）
Fragment：UNP residues 270-327
|
Not recorded | ZN ZINC ION × 1 SCN THIOCYANATE ION × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7；298 K；Na Thiocyanate, PEG 3350, Glycerol, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 298K
|
Resolution 1.42 Å R-free 0.143 |
| 4NPF High-resolution structure of two tandem B domains of staphylococcal protein A connected by the conserved linker Deposited 2013-11-21 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain Y
154–269（116 aa）
Fragment：UNP residues 212-323
|
Mutation：W13F, W113F | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6；298 K；Ammonium Sulfate, MES, pH 6, vapor diffusion, sitting drop, temperature 298K
|
Resolution 1.49 Å R-free 0.185 |
| 4NPF High-resolution structure of two tandem B domains of staphylococcal protein A connected by the conserved linker Deposited 2013-11-21 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain X
154–269（116 aa）
Fragment：UNP residues 212-323
|
Mutation：W13F, W113F | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6；298 K；Ammonium Sulfate, MES, pH 6, vapor diffusion, sitting drop, temperature 298K
|
Resolution 1.49 Å R-free 0.185 |
| 4WWI Crystal structure of the C domain of staphylococcal protein A in complex with the Fc fragment of human IgG at 2.3 Angstrom resolution Deposited 2014-11-11 | Different construct Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
270–327（58 aa）
Fragment：UNP residues 270-327
|
Not recorded | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8；298 K；NaOAc, ammonium sulfate, PEG 5K MME, glycerol
|
Resolution 2.31 Å R-free 0.251 |
| 4WWI Crystal structure of the C domain of staphylococcal protein A in complex with the Fc fragment of human IgG at 2.3 Angstrom resolution Deposited 2014-11-11 | Different construct Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain B
270–327（58 aa）
Fragment：UNP residues 270-327
|
Not recorded | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8；298 K；NaOAc, ammonium sulfate, PEG 5K MME, glycerol
|
Resolution 2.31 Å R-free 0.251 |
| 4WWI Crystal structure of the C domain of staphylococcal protein A in complex with the Fc fragment of human IgG at 2.3 Angstrom resolution Deposited 2014-11-11 | Different construct Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 3 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain C
270–327（58 aa）
Fragment：UNP residues 270-327
|
Not recorded | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8；298 K；NaOAc, ammonium sulfate, PEG 5K MME, glycerol
|
Resolution 2.31 Å R-free 0.251 |
| 4ZMD C domain of staphylococcal protein A mutant - Q9W Deposited 2015-05-03 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
270–327（58 aa）
Fragment：UNP residues 270-327
|
Mutation：Q9W | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；298 K；PEG 3350, sodium thiocyanate
|
Resolution 1.87 Å R-free 0.256 |
| 4ZMD C domain of staphylococcal protein A mutant - Q9W Deposited 2015-05-03 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain B
270–327（58 aa）
Fragment：UNP residues 270-327
|
Mutation：Q9W | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；298 K；PEG 3350, sodium thiocyanate
|
Resolution 1.87 Å R-free 0.256 |
| 4ZNC Fc fragment of human IgG in complex with the C domain of staphylococcal protein A mutant - Q9W Deposited 2015-05-04 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
270–327（58 aa）
Fragment：UNP residues 270-327
|
Mutation：Q9W | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 5.6；298 K；PEG 5000 MME, ammonium sulfate, sodium acetate
|
Resolution 2.28 Å R-free 0.242 |
| 4ZNC Fc fragment of human IgG in complex with the C domain of staphylococcal protein A mutant - Q9W Deposited 2015-05-04 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain B
270–327（58 aa）
Fragment：UNP residues 270-327
|
Mutation：Q9W | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 5.6；298 K；PEG 5000 MME, ammonium sulfate, sodium acetate
|
Resolution 2.28 Å R-free 0.242 |
| 4ZNC Fc fragment of human IgG in complex with the C domain of staphylococcal protein A mutant - Q9W Deposited 2015-05-04 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 3 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain C
270–327（58 aa）
Fragment：UNP residues 270-327
|
Mutation：Q9W | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 5.6；298 K；PEG 5000 MME, ammonium sulfate, sodium acetate
|
Resolution 2.28 Å R-free 0.242 |
| 5CBN Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus with chemical cross-linker EY-CBS Deposited 2015-07-01 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
218–269（52 aa）
Fragment：B4 domain (UNP RESIDUES 218-269)
|
Mutation：E126A, N129A, E133C, G147A | EYC 2,2'-ethyne-1,2-diylbis{5-[(chloroacetyl)amino]benzenesulfonic acid} × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 6.5；277 K；36% w/v PEG 2000, 0.2M magnesium chloride hexahydrate
|
Resolution 2.30 Å R-free 0.260 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 10 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain J
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 11 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain K
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 12 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain L
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain B
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 3 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain C
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 4 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain D
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 5 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain E
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 6 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain F
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 7 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain G
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 8 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain H
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 9 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain I
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5COC Fusion protein of human calmodulin and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-20 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
213–267（55 aa）
Fragment：B4 domain (UNP RESIDUES 213-267),N-terminal (UNP RESIDUES 5-78)
|
Mutation：G240A, K261C, L1005A, T1006A, Q1009C | CA CALCIUM ION × 2 |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；298 K；10% w/v PEG 1000, 10% w/v PEG 8000
|
Resolution 2.67 Å R-free 0.259 |
| 5EWX Fusion protein of T4 lysozyme and B4 domain of protein A from staphylococcal aureus with chemical cross-linker EY-CBS Deposited 2015-11-22 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
212–266（55 aa）
Fragment：UNP RESIDUES 1-35, 219-266, 38-164
|
Mutation：A1212V, G1240A, E1258C, K1261A, L1262A, N40C, C54T, C97A, K162A | EYC 2,2'-ethyne-1,2-diylbis{5-[(chloroacetyl)amino]benzenesulfonic acid} × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 7.5；277 K；1.84M Na/K Phosphate, pH 7.5
|
Resolution 2.60 Å R-free 0.253 |
| 5EWX Fusion protein of T4 lysozyme and B4 domain of protein A from staphylococcal aureus with chemical cross-linker EY-CBS Deposited 2015-11-22 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric |
Chain B
212–266（55 aa）
Fragment：UNP RESIDUES 1-35, 219-266, 38-164
|
Mutation：A1212V, G1240A, E1258C, K1261A, L1262A, N40C, C54T, C97A, K162A | EYC 2,2'-ethyne-1,2-diylbis{5-[(chloroacetyl)amino]benzenesulfonic acid} × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 7.5；277 K；1.84M Na/K Phosphate, pH 7.5
|
Resolution 2.60 Å R-free 0.253 |
| 5H75 Crystal structure of the MrsD-Protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Homooligomer；Protein × 12 PDB declaration: dodecameric |
Chain A
223–269（47 aa）
Fragment：UNP RESIDUES 1-184,223-269
Chain B
223–269（47 aa）
Fragment：UNP RESIDUES 1-184,223-269
Chain C
223–269（47 aa）
Fragment：UNP RESIDUES 1-184,223-269
Chain D
223–269（47 aa）
Fragment：UNP RESIDUES 1-184,223-269
|
Mutation：K182Q,G240A Mutation：K182Q,G240A Mutation：K182Q,G240A Mutation：K182Q,G240A | FAD FLAVIN-ADENINE DINUCLEOTIDE × 12 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 5.5；277 K；0.94M sodium citrate pH 5.5
|
Resolution 2.74 Å R-free 0.243 |
| 5H76 Crystal structure of the DARPin-Protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
235–267（33 aa）
Fragment：RESIDUES 9-176,177-209 (UNP RESIDUES 235-267)
|
Mutation：G182A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 9.5；296 K；0.63M sodium potassium phosphate pH 9.5
|
Resolution 2.60 Å R-free 0.250 |
| 5H76 Crystal structure of the DARPin-Protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain B
235–267（33 aa）
Fragment：RESIDUES 9-176,177-209 (UNP RESIDUES 235-267)
|
Mutation：G182A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 9.5；296 K；0.63M sodium potassium phosphate pH 9.5
|
Resolution 2.60 Å R-free 0.250 |
| 5H76 Crystal structure of the DARPin-Protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 3 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain C
235–267（33 aa）
Fragment：RESIDUES 9-176,177-209 (UNP RESIDUES 235-267)
|
Mutation：G182A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 9.5；296 K；0.63M sodium potassium phosphate pH 9.5
|
Resolution 2.60 Å R-free 0.250 |
| 5H77 Crystal structure of the PKA-protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Homooligomer；Protein × 2 PDB declaration: dimeric |
Chain A
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain B
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation：G222A, G240A Mutation：G222A, G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å R-free 0.284 |
| 5H77 Crystal structure of the PKA-protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Insufficient information Homooligomer；Protein × 2 PDB declaration: dimeric |
Chain C
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain D
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation：G222A, G240A Mutation：G222A, G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å R-free 0.284 |
| 5H77 Crystal structure of the PKA-protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 3 Insufficient information Homooligomer；Protein × 2 PDB declaration: dimeric |
Chain E
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain F
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation：G222A, G240A Mutation：G222A, G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å R-free 0.284 |
| 5H77 Crystal structure of the PKA-protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 4 Insufficient information Homooligomer；Protein × 2 PDB declaration: dimeric |
Chain G
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain H
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation：G222A, G240A Mutation：G222A, G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å R-free 0.284 |
| 5H77 Crystal structure of the PKA-protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 5 Insufficient information Homooligomer；Protein × 2 PDB declaration: dimeric |
Chain I
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain J
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation：G222A, G240A Mutation：G222A, G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å R-free 0.284 |
| 5H77 Crystal structure of the PKA-protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 6 Insufficient information Homooligomer；Protein × 2 PDB declaration: dimeric |
Chain K
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain L
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation：G222A, G240A Mutation：G222A, G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å R-free 0.284 |
| 5H79 Crystal structure of a repeat protein with three Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain D
217–263（47 aa）
Fragment：UNP RESIDUES 217-263,UNP RESIDUES 219-263,UNP RESIDUES 219-268
Chain D
219–263（45 aa）
Fragment：UNP RESIDUES 217-263,UNP RESIDUES 219-263,UNP RESIDUES 219-268
Chain D
219–268（50 aa）
Fragment：UNP RESIDUES 217-263,UNP RESIDUES 219-263,UNP RESIDUES 219-268
|
Mutation：G59A, N131A, G149A Mutation：G59A, N131A, G149A Mutation：G59A, N131A, G149A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 13.5%(w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.278 |
| 5H79 Crystal structure of a repeat protein with three Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain C
217–263（47 aa）
Fragment：UNP RESIDUES 217-263,UNP RESIDUES 219-263,UNP RESIDUES 219-268
Chain C
219–263（45 aa）
Fragment：UNP RESIDUES 217-263,UNP RESIDUES 219-263,UNP RESIDUES 219-268
Chain C
219–268（50 aa）
Fragment：UNP RESIDUES 217-263,UNP RESIDUES 219-263,UNP RESIDUES 219-268
|
Mutation：G59A, N131A, G149A Mutation：G59A, N131A, G149A Mutation：G59A, N131A, G149A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 13.5%(w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.278 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain C
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain C
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain C
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 10 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain J
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain J
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain J
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 11 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain K
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain K
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain K
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 12 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain L
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain L
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain L
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain A
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain A
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 3 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain D
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain D
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain D
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 4 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain B
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain B
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain B
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 5 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain E
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain E
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain E
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 6 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain F
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain F
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain F
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 7 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain G
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain G
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain G
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 8 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain H
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain H
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain H
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 9 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain I
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain I
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain I
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7B Crystal structure of a repeat protein with five Protein A repeat modules Deposited 2016-11-17 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
215–263（49 aa）
Fragment：UNP RESIDUES 215-263,219-263,219-263,219-263,219-267
Chain A
219–263（45 aa）
Fragment：UNP RESIDUES 215-263,219-263,219-263,219-263,219-267
Chain A
219–267（49 aa）
Fragment：UNP RESIDUES 215-263,219-263,219-263,219-263,219-267
|
Mutation：G59A, G104A, G149A, 1G94A, G239A Mutation：G59A, G104A, G149A, 1G94A, G239A Mutation：G59A, G104A, G149A, 1G94A, G239A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 27.3% PEG MME 2000
|
Resolution 3.10 Å R-free 0.315 |
| 5H7B Crystal structure of a repeat protein with five Protein A repeat modules Deposited 2016-11-17 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain B
215–263（49 aa）
Fragment：UNP RESIDUES 215-263,219-263,219-263,219-263,219-267
Chain B
219–263（45 aa）
Fragment：UNP RESIDUES 215-263,219-263,219-263,219-263,219-267
Chain B
219–267（49 aa）
Fragment：UNP RESIDUES 215-263,219-263,219-263,219-263,219-267
|
Mutation：G59A, G104A, G149A, 1G94A, G239A Mutation：G59A, G104A, G149A, 1G94A, G239A Mutation：G59A, G104A, G149A, 1G94A, G239A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 27.3% PEG MME 2000
|
Resolution 3.10 Å R-free 0.315 |
| 5H7C Crystal structure of a repeat protein with two Protein A-DHR14 repeat modules Deposited 2016-11-17 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
215–267（53 aa）
Fragment：UNP RESIDUES 215-267,219-267
Chain A
219–267（49 aa）
Fragment：UNP RESIDUES 215-267,219-267
|
Mutation：10 mutations Mutation：10 mutations | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 8；296 K；0.1M Tris pH 8.0, 33.75%(w/v) PEG MME 2000
|
Resolution 2.70 Å R-free 0.262 |
| 5H7C Crystal structure of a repeat protein with two Protein A-DHR14 repeat modules Deposited 2016-11-17 | Different construct Different mutation/modification Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain C
215–267（53 aa）
Fragment：UNP RESIDUES 215-267,219-267
Chain C
219–267（49 aa）
Fragment：UNP RESIDUES 215-267,219-267
|
Mutation：10 mutations Mutation：10 mutations | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 8；296 K；0.1M Tris pH 8.0, 33.75%(w/v) PEG MME 2000
|
Resolution 2.70 Å R-free 0.262 |
| 5H7D Crystal structure of the YgjG-protein A-Zpa963-calmodulin complex Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 8 PDB declaration: octameric |
Chain A
220–267（48 aa）
Fragment：UNP RESIDUES 7-453,UNP RESIDUES 220-267
Chain B
220–267（48 aa）
Fragment：UNP RESIDUES 7-453,UNP RESIDUES 220-267
Chain C
220–267（48 aa）
Fragment：UNP RESIDUES 7-453,UNP RESIDUES 220-267
Chain D
220–267（48 aa）
Fragment：UNP RESIDUES 7-453,UNP RESIDUES 220-267
|
Mutation：N222V, G240A Mutation：N222V, G240A Mutation：N222V, G240A Mutation：N222V, G240A | CA CALCIUM ION × 8 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 7.5；296 K；0.1M HEPES pH 7.5, 20.7% PEG 300, 99mM calcium chloride
|
Resolution 2.57 Å R-free 0.241 |
| 5H7D Crystal structure of the YgjG-protein A-Zpa963-calmodulin complex Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Insufficient information Heteromer；Protein × 8 PDB declaration: octameric |
Chain I
220–267（48 aa）
Fragment：UNP RESIDUES 7-453,UNP RESIDUES 220-267
Chain J
220–267（48 aa）
Fragment：UNP RESIDUES 7-453,UNP RESIDUES 220-267
Chain M
220–267（48 aa）
Fragment：UNP RESIDUES 7-453,UNP RESIDUES 220-267
Chain N
220–267（48 aa）
Fragment：UNP RESIDUES 7-453,UNP RESIDUES 220-267
|
Mutation：N222V, G240A Mutation：N222V, G240A Mutation：N222V, G240A Mutation：N222V, G240A | CA CALCIUM ION × 8 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 7.5；296 K；0.1M HEPES pH 7.5, 20.7% PEG 300, 99mM calcium chloride
|
Resolution 2.57 Å R-free 0.241 |
| 5X3F Crystal structure of the YgjG-Protein A-Zpa963-PKA catalytic domain Deposited 2017-02-05 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 8 PDB declaration: octameric |
Chain A
220–269（50 aa）
Fragment：UNP RESIDUES 7-453,220-269
|
Mutation：N222V, G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 5.5；296 K；91mM MES pH 5.5, 2.33M Na formate
|
Resolution 3.38 Å R-free 0.227 |
| 5XBY Crystal structure of the PKA-Protein A fusion protein (end-to-end fusion) Deposited 2017-03-21 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Homooligomer；Protein × 2 PDB declaration: dimeric |
Chain A
217–269（53 aa）
Fragment：UNP RESIDUES 5-44,UNP RESIDUES 217-269
Chain B
217–269（53 aa）
Fragment：UNP RESIDUES 5-44,UNP RESIDUES 217-269
|
Mutation：G240A Mutation：G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 8.5；296 K；100mM Tris pH 8.5, 2.16M Sodium formate
|
Resolution 3.25 Å R-free 0.307 |
| 5XBY Crystal structure of the PKA-Protein A fusion protein (end-to-end fusion) Deposited 2017-03-21 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Insufficient information Homooligomer；Protein × 2 PDB declaration: dimeric |
Chain C
217–269（53 aa）
Fragment：UNP RESIDUES 5-44,UNP RESIDUES 217-269
Chain D
217–269（53 aa）
Fragment：UNP RESIDUES 5-44,UNP RESIDUES 217-269
|
Mutation：G240A Mutation：G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 8.5；296 K；100mM Tris pH 8.5, 2.16M Sodium formate
|
Resolution 3.25 Å R-free 0.307 |
| 6KRV Crystal structure of mouse IgG2b Fc complexed with B domain of Protein A Deposited 2019-08-22 | Different construct Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Other combination Heteromer；Protein × 3 PDB declaration: trimeric |
Chain D
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；293 K；60% (v/v) Tacsimate (pH 7.0)
|
Resolution 3.30 Å R-free 0.250 |
| 6KRV Crystal structure of mouse IgG2b Fc complexed with B domain of Protein A Deposited 2019-08-22 | Different construct Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Other combination Heteromer；Protein × 3 PDB declaration: trimeric |
Chain D
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；293 K；60% (v/v) Tacsimate (pH 7.0)
|
Resolution 3.30 Å R-free 0.250 |
| 7EOY Engineered Hepatitis B virus core antigen T=3 Deposited 2021-04-24 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Homooligomer；Protein × 180 PDB declaration: 180-meric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.60 Å |
| 7EOY Engineered Hepatitis B virus core antigen T=3 Deposited 2021-04-24 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Insufficient information Homooligomer；Protein × 3 PDB declaration: trimeric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.60 Å |
| 7EOY Engineered Hepatitis B virus core antigen T=3 Deposited 2021-04-24 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 3 Insufficient information Homooligomer；Protein × 15 PDB declaration: pentadecameric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.60 Å |
| 7EOY Engineered Hepatitis B virus core antigen T=3 Deposited 2021-04-24 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 4 Insufficient information Homooligomer；Protein × 18 PDB declaration: octadecameric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.60 Å |
| 7EOY Engineered Hepatitis B virus core antigen T=3 Deposited 2021-04-24 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 5 Insufficient information Homooligomer；Protein × 3 PDB declaration: trimeric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.60 Å |
| 7EP6 Engineered Hepatitis B virus core antigen T=4 Deposited 2021-04-26 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Homooligomer；Protein × 240 PDB declaration: 240-meric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
Chain D
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.86 Å |
| 7EP6 Engineered Hepatitis B virus core antigen T=4 Deposited 2021-04-26 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Insufficient information Homooligomer；Protein × 4 PDB declaration: tetrameric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
Chain D
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.86 Å |
| 7EP6 Engineered Hepatitis B virus core antigen T=4 Deposited 2021-04-26 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 3 Insufficient information Homooligomer；Protein × 20 PDB declaration: eicosameric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
Chain D
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.86 Å |
| 7EP6 Engineered Hepatitis B virus core antigen T=4 Deposited 2021-04-26 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 4 Insufficient information Homooligomer；Protein × 24 PDB declaration: 24-meric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
Chain D
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.86 Å |
| 7EP6 Engineered Hepatitis B virus core antigen T=4 Deposited 2021-04-26 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 5 Insufficient information Homooligomer；Protein × 4 PDB declaration: tetrameric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
Chain D
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.86 Å |
| 7FDJ Engineered Hepatitis B virus core antigen with short linker T=4 Deposited 2021-07-16 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Homooligomer；Protein × 240 PDB declaration: 240-meric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
Chain D
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.40 Å |
| 7FDJ Engineered Hepatitis B virus core antigen with short linker T=4 Deposited 2021-07-16 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Insufficient information Homooligomer；Protein × 4 PDB declaration: tetrameric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
Chain D
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.40 Å |
| 7FDJ Engineered Hepatitis B virus core antigen with short linker T=4 Deposited 2021-07-16 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 3 Insufficient information Homooligomer；Protein × 20 PDB declaration: eicosameric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
Chain D
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.40 Å |
| 7FDJ Engineered Hepatitis B virus core antigen with short linker T=4 Deposited 2021-07-16 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 4 Insufficient information Homooligomer；Protein × 24 PDB declaration: 24-meric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
Chain D
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.40 Å |
| 7FDJ Engineered Hepatitis B virus core antigen with short linker T=4 Deposited 2021-07-16 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 5 Insufficient information Homooligomer；Protein × 4 PDB declaration: tetrameric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
Chain D
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.40 Å |
| 7NHA 1918 H1N1 Viral influenza polymerase heterotrimer - Endonuclease and priming loop ordered (Class2a) Deposited 2021-02-10 | Different construct Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 3 PDB declaration: pentameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE；3.5 second blot and 3 microlitres sample.
|
Resolution 2.91 Å |
| 7NHC 1918 H1N1 Viral influenza polymerase heterotrimer - Endonuclease ordered (Class2b) Deposited 2021-02-10 | Different construct Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 3 PDB declaration: pentameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE；3.5 second blot and 3 microlitres sample.
|
Resolution 2.87 Å |
| 7NHX 1918 H1N1 Viral influenza polymerase heterotrimer - full transcriptase (Class1) Deposited 2021-02-11 | Different construct Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 3 PDB declaration: pentameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE；3.5 second blot and 3 microlitres sample.
|
Resolution 3.23 Å |
| 7NI0 1918 H1N1 Viral influenza polymerase heterotrimer - Replicase (class 3) Deposited 2021-02-11 | Different construct Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 3 PDB declaration: pentameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE；3.5 second blot and 3 microlitres sample.
|
Resolution 3.32 Å |
| 7NIK 1918 H1N1 Viral influenza polymerase heterotrimer with Nb8189 core Deposited 2021-02-12 | Different construct Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 4 PDB declaration: hexameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 6.20 Å |
| 7NIL 1918 H1N1 Viral influenza polymerase heterotrimer with Nb8190 core Deposited 2021-02-12 | Different construct Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 4 PDB declaration: hexameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 5.01 Å |
| 7NIR 1918 H1N1 Viral influenza polymerase heterotrimer with Nb8191 core Deposited 2021-02-13 | Different construct Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 4 PDB declaration: hexameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 6.70 Å |
| 7NIS 1918 H1N1 Viral influenza polymerase heterotrimer with Nb8192 core Deposited 2021-02-13 | Different construct Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 4 PDB declaration: hexameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 5.96 Å |
| 7NJ3 1918 H1N1 Viral influenza polymerase heterotrimer with Nb8196 core Deposited 2021-02-15 | Different construct Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 4 PDB declaration: hexameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.48 Å |
| 7NJ4 1918 H1N1 Viral influenza polymerase heterotrimer with Nb8198 core Deposited 2021-02-16 | Different construct Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 4 PDB declaration: hexameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 5.84 Å |
| 7NJ5 1918 H1N1 Viral influenza polymerase heterotrimer with Nb8199 core Deposited 2021-02-16 | Different construct Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 4 PDB declaration: hexameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.63 Å |
| 7NJ7 1918 H1N1 Viral influenza polymerase heterotrimer with Nb8200 core Deposited 2021-02-16 | Different construct Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 4 PDB declaration: hexameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.82 Å |
| 7NK1 1918 Influenza virus polymerase heterotirmer in complex with vRNA promoters and Nb8201 Deposited 2021-02-17 | Different construct Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 4 PDB declaration: hexameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.22 Å |
| 7NK2 1918 H1N1 Viral influenza polymerase heterotrimer with Nb8202 core Deposited 2021-02-17 | Different construct Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 4 PDB declaration: hexameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.84 Å |
| 8CPL YZw2 a scaffold for cryo-EM of small proteins of interest Deposited 2023-03-03 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Homooligomer；Protein × 4 PDB declaration: tetrameric |
Chain A
220–269（50 aa）
Chain B
220–269（50 aa）
Chain C
220–269（50 aa）
Chain D
220–269（50 aa）
|
Not recorded | PLP PYRIDOXAL-5'-PHOSPHATE × 4 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；16.6% w/v PEG3350, 0.2M NaF and 0.1M Bis-Tris Propane pH 5.5
|
Resolution 1.60 Å R-free 0.210 |
| 8DA3 Coevolved affibody-Z domain pair LL1.c1 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
213–269（57 aa）
|
Mutation：Q9L, F13I, L17F, G29A, I31F Non-standard monomer：Yes (specific site not provided by mmCIF) | SO4 SULFATE ION × 1 MLI MALONATE ION × 2 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 9；295 K；2.4 M Ammonium Sulfate
0.1 M bicine pH 9.0
Cryoprotected with sodium malonate
|
Resolution 1.06 Å R-free 0.168 |
| 8DA4 Coevolved affibody-Z domain pair LL1.c2 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
213–269（57 aa）
|
Mutation：Q9L, F13I, G29A, I31F Non-standard monomer：Yes (specific site not provided by mmCIF) | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 4.6；295 K；2.5 M AmmSO4, 0.1 M NaOAc pH 4.6
cryoprotected with Na malonate
|
Resolution 1.92 Å R-free 0.247 |
| 8DA4 Coevolved affibody-Z domain pair LL1.c2 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain C
213–269（57 aa）
|
Mutation：Q9L, F13I, G29A, I31F Non-standard monomer：Yes (specific site not provided by mmCIF) | SO4 SULFATE ION × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 4.6；295 K；2.5 M AmmSO4, 0.1 M NaOAc pH 4.6
cryoprotected with Na malonate
|
Resolution 1.92 Å R-free 0.247 |
| 8DA4 Coevolved affibody-Z domain pair LL1.c2 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 3 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain E
213–269（57 aa）
|
Mutation：Q9L, F13I, G29A, I31F Non-standard monomer：Yes (specific site not provided by mmCIF) | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 4.6；295 K；2.5 M AmmSO4, 0.1 M NaOAc pH 4.6
cryoprotected with Na malonate
|
Resolution 1.92 Å R-free 0.247 |
| 8DA5 Coevolved affibody-Z domain pair LL1.c4 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
212–269（58 aa）
|
Mutation：Q9F, F13I, G29A, I31F Non-standard monomer：Yes (specific site not provided by mmCIF) | GOL GLYCEROL × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8.5；295 K；2.3 M AmmPO4, 100 mM Tris pH 8.5
cryoprotected with 30% glycerol
|
Resolution 1.00 Å R-free 0.191 |
| 8DA5 Coevolved affibody-Z domain pair LL1.c4 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain C
212–269（58 aa）
|
Mutation：Q9F, F13I, G29A, I31F Non-standard monomer：Yes (specific site not provided by mmCIF) | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8.5；295 K；2.3 M AmmPO4, 100 mM Tris pH 8.5
cryoprotected with 30% glycerol
|
Resolution 1.00 Å R-free 0.191 |
| 8DA6 Coevolved affibody-Z domain pair LL1.c5 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
213–269（57 aa）
|
Mutation：Q9F, F13I, G29A, I31F Non-standard monomer：Yes (specific site not provided by mmCIF) | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 5；295 K；2.4 M ammonium Sulfate
0.1 M citric acid pH 5.0
cryoprotected with sodium malonate
|
Resolution 1.50 Å R-free 0.251 |
| 8DA6 Coevolved affibody-Z domain pair LL1.c5 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain C
213–269（57 aa）
|
Mutation：Q9F, F13I, G29A, I31F | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 5；295 K；2.4 M ammonium Sulfate
0.1 M citric acid pH 5.0
cryoprotected with sodium malonate
|
Resolution 1.50 Å R-free 0.251 |
| 8DA7 Coevolved affibody-Z domain pair LL1.c6 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
213–269（57 aa）
|
Mutation：Q9L, F13I, G29A, I31F Non-standard monomer：Yes (specific site not provided by mmCIF) | MLI MALONATE ION × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8.5；295 K；2.5 M AmmSO4, 100 mM tris pH 8.5
cryoprotected with Na malonate
|
Resolution 1.02 Å R-free 0.183 |
| 8DA8 Coevolved affibody-Z domain pair LL2.c1 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
213–269（57 aa）
|
Mutation：Q9L F13V, G29A, I31F | GOL GLYCEROL × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7；295 K；2.5 M ammonium sulfate
100 mM HEPES pH 7.0
Cryoprotected with 30% glycerol
|
Resolution 1.29 Å R-free 0.235 |
| 8DA9 Coevolved affibody-Z domain pair LL2.c3 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
213–269（57 aa）
|
Mutation：Q9L, F13V, G29A, I31F Non-standard monomer：Yes (specific site not provided by mmCIF) | GOL GLYCEROL × 1 SO4 SULFATE ION × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7；295 K；2.4 M Ammonium sulfate
0.1M HEPES pH 7.0
Cryoprotected with 30% glycerol
|
Resolution 1.35 Å R-free 0.198 |
| 8DA9 Coevolved affibody-Z domain pair LL2.c3 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain C
213–269（57 aa）
|
Mutation：Q9L, F13V, G29A, I31F Non-standard monomer：Yes (specific site not provided by mmCIF) | GOL GLYCEROL × 1 SO4 SULFATE ION × 2 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7；295 K；2.4 M Ammonium sulfate
0.1M HEPES pH 7.0
Cryoprotected with 30% glycerol
|
Resolution 1.35 Å R-free 0.198 |
| 8DAA Coevolved affibody-Z domain pair LL2.c7 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
213–269（57 aa）
|
Mutation：Q9L, F13V, G29A, I31F | MLI MALONATE ION × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7；295 K；3.0 M Ammonium sulfate,
100 mM HEPES pH 7.0
cryoprotected with sodium malonate
|
Resolution 1.75 Å R-free 0.298 |
| 8DAA Coevolved affibody-Z domain pair LL2.c7 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain C
213–269（57 aa）
|
Mutation：Q9L, F13V, G29A, I31F | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7；295 K；3.0 M Ammonium sulfate,
100 mM HEPES pH 7.0
cryoprotected with sodium malonate
|
Resolution 1.75 Å R-free 0.298 |
| 8DAB Coevolved affibody-Z domain pair LL2.c17 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
213–269（57 aa）
|
Mutation：Q9V, G29A, I31V Non-standard monomer：Yes (specific site not provided by mmCIF) | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8.2；295 K；2.3 M Amm2HPO4, 100 mM Tris pH 8.2
cryoprotected in 30% glycerol
|
Resolution 1.13 Å R-free 0.200 |
| 8DAC Coevolved affibody-Z domain pair LL2.c22 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
213–269（57 aa）
|
Mutation：Q9I, F13V, L17F, G29A, I31F Non-standard monomer：Yes (specific site not provided by mmCIF) | GOL GLYCEROL × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8.2；295 K；2.5 M AmmSO4, 100 mM Tris pH 8.2
Cryoprotected with 30% glycerol
|
Resolution 1.19 Å R-free 0.196 |
| 8JXR Structure of nanobody-bound DRD1_LSD complex Deposited 2023-07-01 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 5 PDB declaration: pentameric |
Chain C
289–327（39 aa）
|
Mutation：E360Q,K363A,D364F,T367I,R368L | 7LD (8alpha)-N,N-diethyl-6-methyl-9,10-didehydroergoline-8-carboxamide × 1 |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.57 Å |
| 8JXS Structure of nanobody-bound DRD1_PF-6142 complex Deposited 2023-07-01 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 5 PDB declaration: pentameric |
Chain C
289–327（39 aa）
|
Mutation：E360Q,K363A,D364F,T367I,R368L,D404E,A405H | V6X 4-[3-methyl-4-(6-methylimidazo[1,2-a]pyrazin-5-yl)phenoxy]furo[3,2-c]pyridine × 1 |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.00 Å |
| 8R2P YZwIdeal x16 a scaffold for cryo-EM of small proteins of interest crystallizing in space group 19 (P 21 21 21) Deposited 2023-11-07 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Homooligomer；Protein × 4 PDB declaration: tetrameric |
Chain A
218–269（52 aa）
Chain B
218–269（52 aa）
Chain C
218–269（52 aa）
Chain D
218–269（52 aa）
|
Mutation：G487A Mutation：G487A Mutation：G487A Mutation：G487A | PLP PYRIDOXAL-5'-PHOSPHATE × 4 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6.5；277 K；50% w/v PEG200, 0.2M MgCl2 and 0.1M Sodium Cacodylate buffer pH 6.5
|
Resolution 2.22 Å R-free 0.230 |
| 9QU4 Cryo-EM structure of the inward-open choline-bound state of choline/ethanolamine transporter FLVCR2 Deposited 2025-04-10 | Different construct Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
159–321（163 aa）
|
Not recorded | CHT CHOLINE ION × 1 |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.39 Å |
| 9W3K GPR151-Legobody complex Deposited 2025-07-29 | Different construct Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 5 PDB declaration: pentameric |
Chain C
289–327（39 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.08 Å |
66 other PDB entries and 127 assemblies. Open the comparison page and filter oligomeric states
View Construct and Data Evidence
| UniProt name | SPA2_STAAU |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A； PDBConstruct 1–56； UniProt 37–92 |
