|
1BDC
STAPHYLOCOCCUS AUREUS PROTEIN A, IMMUNOGLOBULIN-BINDING B DOMAIN, NMR, 10 STRUCTURES
Deposited 1996-06-28
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
212–270(59 aa)
Fragment:B DOMAIN
|
Not recorded
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 5;303 K
|
Resolution not provided
|
|
1BDD
STAPHYLOCOCCUS AUREUS PROTEIN A, IMMUNOGLOBULIN-BINDING B DOMAIN, NMR, MINIMIZED AVERAGE STRUCTURE
Deposited 1996-06-28
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
212–270(59 aa)
Fragment:B DOMAIN
|
Not recorded
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 5;303 K
|
Resolution not provided
|
|
1EDI
STAPHYLOCOCCAL PROTEIN A E-DOMAIN (180), NMR, MINIMIZED AVERAGE STRUCTURE
Deposited 1996-10-07
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
37–92(56 aa)
Fragment:E-DOMAIN
|
Not recorded
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 5.7;298 K
|
Resolution not provided
|
|
1EDJ
STAPHYLOCOCCAL PROTEIN A E-DOMAIN (180), NMR, 20 STRUCTURES
Deposited 1996-10-07
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
37–92(56 aa)
Fragment:E-DOMAIN (180)
|
Not recorded
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 5.7;298 K
|
Resolution not provided
|
|
1EDK
STAPHYLOCOCCAL PROTEIN A E-DOMAIN (-60), NMR, MINIMIZED AVERAGE STRUCTURE
Deposited 1996-07-22
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
37–92(56 aa)
Fragment:E-DOMAIN
|
Not recorded
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 5.7;298 K
|
Resolution not provided
|
|
1EDL
STAPHYLOCOCCAL PROTEIN A E-DOMAIN (-60), NMR, 22 STRUCTURES
Deposited 1996-07-22
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
37–92(56 aa)
Fragment:E-DOMAIN
|
Not recorded
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 5.7;298 K
|
Resolution not provided
|
|
1LP1
Protein Z in complex with an in vitro selected affibody
Deposited 2002-05-07
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B
212–269(58 aa)
Fragment:RESIDUES 2-58
|
Mutation:A1V, G29A
|
SO4 SULFATE ION × 4
MG MAGNESIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;298 K;MgSO4, MES, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
|
Resolution 2.30 Å
R-free 0.256
|
|
1LP1
Protein Z in complex with an in vitro selected affibody
Deposited 2002-05-07
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 4
PDB declaration: tetrameric
|
Chain B
212–269(58 aa)
Fragment:RESIDUES 2-58
|
Mutation:A1V, G29A
|
SO4 SULFATE ION × 8
MG MAGNESIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;298 K;MgSO4, MES, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
|
Resolution 2.30 Å
R-free 0.256
|
|
1Q2N
REFINED Solution NMR structure of the Z domain of STAPHYLOCOCCAL PROTEIN A
Deposited 2003-07-25
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
212–269(58 aa)
Fragment:residues 212-269
|
Not recorded
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 6.5;303 K;Ionic strength (raw mmCIF value) 20 mM NH4OAc;Pressure 1
NMR sample composition
1mM Z domain U-15N,13C; 20mM NH4OAc buffer; 95% H2O, 5% D2O. | 95% H2O/5% D2O
|
Resolution not provided
|
|
1SS1
STAPHYLOCOCCAL PROTEIN A, B-DOMAIN, Y15W MUTANT, NMR, 25 STRUCTURES
Deposited 2004-03-23
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
212–270(59 aa)
Fragment:B DOMAIN
|
Mutation:Y15W
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 5.5;298 K;Ionic strength (raw mmCIF value) 100 mM NaCl / 50 mM acetate;Pressure ambient
NMR sample composition
2mM sample, U-13C, U-15N; 50 mM D-acetate buffer, 100 mM NaCl, pH 5.5; 90% H2O, 10% D2O | 90% H20, 10% D20
|
Resolution not provided
|
|
2JWD
protein A
Deposited 2007-10-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
213–269(57 aa)
Fragment:B domain
|
Mutation:Y15W
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 5;298 K;Ionic strength (raw mmCIF value) 100;Pressure ambient
NMR sample composition
20mM sodium acetate, 100mM sodium chloride, 90% H2O/10% D2O | 90% H2O/10% D2O
|
Resolution not provided
|
|
2M5A
Protein A binding by an engineered Affibody molecule
Deposited 2013-02-19
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
213–269(57 aa)
|
Not recorded
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 5.6;298 K;Ionic strength (raw mmCIF value) 0.095;Pressure ambient
NMR sample composition
0.5 to 1 mM [U-99% 13C; U-99% 15N] Z domain, 25% molar excess mM ZpA963, 93% H2O/7% D2O | 93% H2O/7% D2O
NMR sample composition
0.5 to 1.0 mM [U-99% 13C; U-99% 15N] ZpA963, 25 5 molar excess mM Z domain, 93% H2O/7% D2O | 93% H2O/7% D2O
|
Resolution not provided
|
|
2SPZ
STAPHYLOCOCCAL PROTEIN A, Z-DOMAIN, NMR, 10 STRUCTURES
Deposited 1998-07-29
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
212–269(58 aa)
Fragment:Z DOMAIN
|
Mutation:A1V, G29A
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 6.5;303 K;Ionic strength (raw mmCIF value) 10 MILLIMOLAR K2HPO4;Pressure 1
|
Resolution not provided
|
|
3MZW
HER2 extracelluar region with affinity matured 3-helix affibody ZHER2:342
Deposited 2010-05-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Other combination
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B
212–269(58 aa)
Fragment:B 4 repeat domain residues 212-269
|
Mutation:A212V, Q220M, Q221R, F224Y, Y225W, L228A, H229L, E235N, E236Q, R238K, N239R, G240A, Q243R, K246Y
|
NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 5;279 K;0.05M sodium chloride, 7.5% PEG3350, 0.1M ammonium acetate, VAPOR DIFFUSION, HANGING DROP, temperature 279K
|
Resolution 2.90 Å
R-free 0.278
|
|
4NPD
High-resolution structure of C domain of staphylococcal protein A at cryogenic temperature
Deposited 2013-11-21
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
270–327(58 aa)
Fragment:UNP residues 270-327
|
Not recorded
|
ZN ZINC ION × 2
SCN THIOCYANATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7;298 K;Na Thiocyanate, PEG 3350, Glycerol, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 298K
|
Resolution 0.90 Å
R-free 0.130
|
|
4NPE
High-resolution structure of C domain of staphylococcal protein A at room temperature
Deposited 2013-11-21
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
270–327(58 aa)
Fragment:UNP residues 270-327
|
Not recorded
|
ZN ZINC ION × 1
SCN THIOCYANATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7;298 K;Na Thiocyanate, PEG 3350, Glycerol, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 298K
|
Resolution 1.42 Å
R-free 0.143
|
|
4NPF
High-resolution structure of two tandem B domains of staphylococcal protein A connected by the conserved linker
Deposited 2013-11-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain Y
154–269(116 aa)
Fragment:UNP residues 212-323
|
Mutation:W13F, W113F
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6;298 K;Ammonium Sulfate, MES, pH 6, vapor diffusion, sitting drop, temperature 298K
|
Resolution 1.49 Å
R-free 0.185
|
|
4NPF
High-resolution structure of two tandem B domains of staphylococcal protein A connected by the conserved linker
Deposited 2013-11-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain X
154–269(116 aa)
Fragment:UNP residues 212-323
|
Mutation:W13F, W113F
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6;298 K;Ammonium Sulfate, MES, pH 6, vapor diffusion, sitting drop, temperature 298K
|
Resolution 1.49 Å
R-free 0.185
|
|
4WWI
Crystal structure of the C domain of staphylococcal protein A in complex with the Fc fragment of human IgG at 2.3 Angstrom resolution
Deposited 2014-11-11
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
270–327(58 aa)
Fragment:UNP residues 270-327
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8;298 K;NaOAc, ammonium sulfate, PEG 5K MME, glycerol
|
Resolution 2.31 Å
R-free 0.251
|
|
4WWI
Crystal structure of the C domain of staphylococcal protein A in complex with the Fc fragment of human IgG at 2.3 Angstrom resolution
Deposited 2014-11-11
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B
270–327(58 aa)
Fragment:UNP residues 270-327
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8;298 K;NaOAc, ammonium sulfate, PEG 5K MME, glycerol
|
Resolution 2.31 Å
R-free 0.251
|
|
4WWI
Crystal structure of the C domain of staphylococcal protein A in complex with the Fc fragment of human IgG at 2.3 Angstrom resolution
Deposited 2014-11-11
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
270–327(58 aa)
Fragment:UNP residues 270-327
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8;298 K;NaOAc, ammonium sulfate, PEG 5K MME, glycerol
|
Resolution 2.31 Å
R-free 0.251
|
|
4ZMD
C domain of staphylococcal protein A mutant - Q9W
Deposited 2015-05-03
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
270–327(58 aa)
Fragment:UNP residues 270-327
|
Mutation:Q9W
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;298 K;PEG 3350, sodium thiocyanate
|
Resolution 1.87 Å
R-free 0.256
|
|
4ZMD
C domain of staphylococcal protein A mutant - Q9W
Deposited 2015-05-03
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
270–327(58 aa)
Fragment:UNP residues 270-327
|
Mutation:Q9W
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;298 K;PEG 3350, sodium thiocyanate
|
Resolution 1.87 Å
R-free 0.256
|
|
4ZNC
Fc fragment of human IgG in complex with the C domain of staphylococcal protein A mutant - Q9W
Deposited 2015-05-04
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
270–327(58 aa)
Fragment:UNP residues 270-327
|
Mutation:Q9W
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 5.6;298 K;PEG 5000 MME, ammonium sulfate, sodium acetate
|
Resolution 2.28 Å
R-free 0.242
|
|
4ZNC
Fc fragment of human IgG in complex with the C domain of staphylococcal protein A mutant - Q9W
Deposited 2015-05-04
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B
270–327(58 aa)
Fragment:UNP residues 270-327
|
Mutation:Q9W
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 5.6;298 K;PEG 5000 MME, ammonium sulfate, sodium acetate
|
Resolution 2.28 Å
R-free 0.242
|
|
4ZNC
Fc fragment of human IgG in complex with the C domain of staphylococcal protein A mutant - Q9W
Deposited 2015-05-04
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
270–327(58 aa)
Fragment:UNP residues 270-327
|
Mutation:Q9W
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 5.6;298 K;PEG 5000 MME, ammonium sulfate, sodium acetate
|
Resolution 2.28 Å
R-free 0.242
|
|
5CBN
Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus with chemical cross-linker EY-CBS
Deposited 2015-07-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
218–269(52 aa)
Fragment:B4 domain (UNP RESIDUES 218-269)
|
Mutation:E126A, N129A, E133C, G147A
|
EYC 2,2'-ethyne-1,2-diylbis{5-[(chloroacetyl)amino]benzenesulfonic acid} × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION;pH 6.5;277 K;36% w/v PEG 2000, 0.2M magnesium chloride hexahydrate
|
Resolution 2.30 Å
R-free 0.260
|
|
5CBO
Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus
Deposited 2015-07-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
102–153(52 aa)
Fragment:B4 domain (UNP RESIDUES 102-153)
|
Mutation:D1219A, S1222A, E1226C, N1229H, E1236A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION;pH 5.5;298 K;34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å
R-free 0.254
|
|
5CBO
Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus
Deposited 2015-07-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 10
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain J
102–153(52 aa)
Fragment:B4 domain (UNP RESIDUES 102-153)
|
Mutation:D1219A, S1222A, E1226C, N1229H, E1236A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION;pH 5.5;298 K;34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å
R-free 0.254
|
|
5CBO
Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus
Deposited 2015-07-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 11
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain K
102–153(52 aa)
Fragment:B4 domain (UNP RESIDUES 102-153)
|
Mutation:D1219A, S1222A, E1226C, N1229H, E1236A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION;pH 5.5;298 K;34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å
R-free 0.254
|
|
5CBO
Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus
Deposited 2015-07-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 12
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain L
102–153(52 aa)
Fragment:B4 domain (UNP RESIDUES 102-153)
|
Mutation:D1219A, S1222A, E1226C, N1229H, E1236A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION;pH 5.5;298 K;34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å
R-free 0.254
|
|
5CBO
Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus
Deposited 2015-07-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
102–153(52 aa)
Fragment:B4 domain (UNP RESIDUES 102-153)
|
Mutation:D1219A, S1222A, E1226C, N1229H, E1236A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION;pH 5.5;298 K;34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å
R-free 0.254
|
|
5CBO
Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus
Deposited 2015-07-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain C
102–153(52 aa)
Fragment:B4 domain (UNP RESIDUES 102-153)
|
Mutation:D1219A, S1222A, E1226C, N1229H, E1236A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION;pH 5.5;298 K;34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å
R-free 0.254
|
|
5CBO
Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus
Deposited 2015-07-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain D
102–153(52 aa)
Fragment:B4 domain (UNP RESIDUES 102-153)
|
Mutation:D1219A, S1222A, E1226C, N1229H, E1236A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION;pH 5.5;298 K;34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å
R-free 0.254
|
|
5CBO
Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus
Deposited 2015-07-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 5
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain E
102–153(52 aa)
Fragment:B4 domain (UNP RESIDUES 102-153)
|
Mutation:D1219A, S1222A, E1226C, N1229H, E1236A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION;pH 5.5;298 K;34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å
R-free 0.254
|
|
5CBO
Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus
Deposited 2015-07-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 6
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain F
102–153(52 aa)
Fragment:B4 domain (UNP RESIDUES 102-153)
|
Mutation:D1219A, S1222A, E1226C, N1229H, E1236A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION;pH 5.5;298 K;34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å
R-free 0.254
|
|
5CBO
Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus
Deposited 2015-07-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 7
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain G
102–153(52 aa)
Fragment:B4 domain (UNP RESIDUES 102-153)
|
Mutation:D1219A, S1222A, E1226C, N1229H, E1236A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION;pH 5.5;298 K;34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å
R-free 0.254
|
|
5CBO
Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus
Deposited 2015-07-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 8
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain H
102–153(52 aa)
Fragment:B4 domain (UNP RESIDUES 102-153)
|
Mutation:D1219A, S1222A, E1226C, N1229H, E1236A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION;pH 5.5;298 K;34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å
R-free 0.254
|
|
5CBO
Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus
Deposited 2015-07-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 9
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain I
102–153(52 aa)
Fragment:B4 domain (UNP RESIDUES 102-153)
|
Mutation:D1219A, S1222A, E1226C, N1229H, E1236A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION;pH 5.5;298 K;34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å
R-free 0.254
|
|
5COC
Fusion protein of human calmodulin and B4 domain of protein A from staphylococcal aureus
Deposited 2015-07-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
213–267(55 aa)
Fragment:B4 domain (UNP RESIDUES 213-267),N-terminal (UNP RESIDUES 5-78)
|
Mutation:G240A, K261C, L1005A, T1006A, Q1009C
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION;298 K;10% w/v PEG 1000, 10% w/v PEG 8000
|
Resolution 2.67 Å
R-free 0.259
|
|
5EWX
Fusion protein of T4 lysozyme and B4 domain of protein A from staphylococcal aureus with chemical cross-linker EY-CBS
Deposited 2015-11-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
212–266(55 aa)
Fragment:UNP RESIDUES 1-35, 219-266, 38-164
|
Mutation:A1212V, G1240A, E1258C, K1261A, L1262A, N40C, C54T, C97A, K162A
|
EYC 2,2'-ethyne-1,2-diylbis{5-[(chloroacetyl)amino]benzenesulfonic acid} × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION;pH 7.5;277 K;1.84M Na/K Phosphate, pH 7.5
|
Resolution 2.60 Å
R-free 0.253
|
|
5EWX
Fusion protein of T4 lysozyme and B4 domain of protein A from staphylococcal aureus with chemical cross-linker EY-CBS
Deposited 2015-11-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Insufficient information
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
212–266(55 aa)
Fragment:UNP RESIDUES 1-35, 219-266, 38-164
|
Mutation:A1212V, G1240A, E1258C, K1261A, L1262A, N40C, C54T, C97A, K162A
|
EYC 2,2'-ethyne-1,2-diylbis{5-[(chloroacetyl)amino]benzenesulfonic acid} × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION;pH 7.5;277 K;1.84M Na/K Phosphate, pH 7.5
|
Resolution 2.60 Å
R-free 0.253
|
|
5H75
Crystal structure of the MrsD-Protein A fusion protein
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Homooligomer;Protein × 12
PDB declaration: dodecameric
|
Chain A
223–269(47 aa)
Fragment:UNP RESIDUES 1-184,223-269
Chain B
223–269(47 aa)
Fragment:UNP RESIDUES 1-184,223-269
Chain C
223–269(47 aa)
Fragment:UNP RESIDUES 1-184,223-269
Chain D
223–269(47 aa)
Fragment:UNP RESIDUES 1-184,223-269
|
Mutation:K182Q,G240A
Mutation:K182Q,G240A
Mutation:K182Q,G240A
Mutation:K182Q,G240A
|
FAD FLAVIN-ADENINE DINUCLEOTIDE × 12
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 5.5;277 K;0.94M sodium citrate pH 5.5
|
Resolution 2.74 Å
R-free 0.243
|
|
5H76
Crystal structure of the DARPin-Protein A fusion protein
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
235–267(33 aa)
Fragment:RESIDUES 9-176,177-209 (UNP RESIDUES 235-267)
|
Mutation:G182A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 9.5;296 K;0.63M sodium potassium phosphate pH 9.5
|
Resolution 2.60 Å
R-free 0.250
|
|
5H76
Crystal structure of the DARPin-Protein A fusion protein
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
235–267(33 aa)
Fragment:RESIDUES 9-176,177-209 (UNP RESIDUES 235-267)
|
Mutation:G182A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 9.5;296 K;0.63M sodium potassium phosphate pH 9.5
|
Resolution 2.60 Å
R-free 0.250
|
|
5H76
Crystal structure of the DARPin-Protein A fusion protein
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain C
235–267(33 aa)
Fragment:RESIDUES 9-176,177-209 (UNP RESIDUES 235-267)
|
Mutation:G182A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 9.5;296 K;0.63M sodium potassium phosphate pH 9.5
|
Resolution 2.60 Å
R-free 0.250
|
|
5H77
Crystal structure of the PKA-protein A fusion protein
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
220–268(49 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain B
220–268(49 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation:G222A, G240A
Mutation:G222A, G240A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å
R-free 0.284
|
|
5H77
Crystal structure of the PKA-protein A fusion protein
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Insufficient information
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain C
220–268(49 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain D
220–268(49 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation:G222A, G240A
Mutation:G222A, G240A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å
R-free 0.284
|
|
5H77
Crystal structure of the PKA-protein A fusion protein
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Insufficient information
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain E
220–268(49 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain F
220–268(49 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation:G222A, G240A
Mutation:G222A, G240A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å
R-free 0.284
|
|
5H77
Crystal structure of the PKA-protein A fusion protein
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Insufficient information
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain G
220–268(49 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain H
220–268(49 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation:G222A, G240A
Mutation:G222A, G240A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å
R-free 0.284
|
|
5H77
Crystal structure of the PKA-protein A fusion protein
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 5
Insufficient information
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain I
220–268(49 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain J
220–268(49 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation:G222A, G240A
Mutation:G222A, G240A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å
R-free 0.284
|
|
5H77
Crystal structure of the PKA-protein A fusion protein
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 6
Insufficient information
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain K
220–268(49 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain L
220–268(49 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation:G222A, G240A
Mutation:G222A, G240A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å
R-free 0.284
|
|
5H79
Crystal structure of a repeat protein with three Protein A repeat module
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain D
217–263(47 aa)
Fragment:UNP RESIDUES 217-263,UNP RESIDUES 219-263,UNP RESIDUES 219-268
Chain D
219–263(45 aa)
Fragment:UNP RESIDUES 217-263,UNP RESIDUES 219-263,UNP RESIDUES 219-268
Chain D
219–268(50 aa)
Fragment:UNP RESIDUES 217-263,UNP RESIDUES 219-263,UNP RESIDUES 219-268
|
Mutation:G59A, N131A, G149A
Mutation:G59A, N131A, G149A
Mutation:G59A, N131A, G149A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 13.5%(w/v) PEG 1000
|
Resolution 2.70 Å
R-free 0.278
|
|
5H79
Crystal structure of a repeat protein with three Protein A repeat module
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain C
217–263(47 aa)
Fragment:UNP RESIDUES 217-263,UNP RESIDUES 219-263,UNP RESIDUES 219-268
Chain C
219–263(45 aa)
Fragment:UNP RESIDUES 217-263,UNP RESIDUES 219-263,UNP RESIDUES 219-268
Chain C
219–268(50 aa)
Fragment:UNP RESIDUES 217-263,UNP RESIDUES 219-263,UNP RESIDUES 219-268
|
Mutation:G59A, N131A, G149A
Mutation:G59A, N131A, G149A
Mutation:G59A, N131A, G149A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 13.5%(w/v) PEG 1000
|
Resolution 2.70 Å
R-free 0.278
|
|
5H7A
Crystal structure of a repeat protein with four Protein A repeat module
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain C
215–263(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain C
219–263(45 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain C
219–267(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å
R-free 0.285
|
|
5H7A
Crystal structure of a repeat protein with four Protein A repeat module
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 10
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain J
215–263(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain J
219–263(45 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain J
219–267(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å
R-free 0.285
|
|
5H7A
Crystal structure of a repeat protein with four Protein A repeat module
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 11
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain K
215–263(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain K
219–263(45 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain K
219–267(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å
R-free 0.285
|
|
5H7A
Crystal structure of a repeat protein with four Protein A repeat module
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 12
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain L
215–263(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain L
219–263(45 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain L
219–267(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å
R-free 0.285
|
|
5H7A
Crystal structure of a repeat protein with four Protein A repeat module
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
215–263(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain A
219–263(45 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain A
219–267(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å
R-free 0.285
|
|
5H7A
Crystal structure of a repeat protein with four Protein A repeat module
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain D
215–263(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain D
219–263(45 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain D
219–267(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å
R-free 0.285
|
|
5H7A
Crystal structure of a repeat protein with four Protein A repeat module
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
215–263(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain B
219–263(45 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain B
219–267(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å
R-free 0.285
|
|
5H7A
Crystal structure of a repeat protein with four Protein A repeat module
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 5
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain E
215–263(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain E
219–263(45 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain E
219–267(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å
R-free 0.285
|
|
5H7A
Crystal structure of a repeat protein with four Protein A repeat module
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 6
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain F
215–263(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain F
219–263(45 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain F
219–267(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å
R-free 0.285
|
|
5H7A
Crystal structure of a repeat protein with four Protein A repeat module
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 7
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain G
215–263(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain G
219–263(45 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain G
219–267(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å
R-free 0.285
|
|
5H7A
Crystal structure of a repeat protein with four Protein A repeat module
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 8
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain H
215–263(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain H
219–263(45 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain H
219–267(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å
R-free 0.285
|
|
5H7A
Crystal structure of a repeat protein with four Protein A repeat module
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 9
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain I
215–263(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain I
219–263(45 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain I
219–267(49 aa)
Fragment:UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
Mutation:G59A, G104A, G149A, G194A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å
R-free 0.285
|
|
5H7B
Crystal structure of a repeat protein with five Protein A repeat modules
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
215–263(49 aa)
Fragment:UNP RESIDUES 215-263,219-263,219-263,219-263,219-267
Chain A
219–263(45 aa)
Fragment:UNP RESIDUES 215-263,219-263,219-263,219-263,219-267
Chain A
219–267(49 aa)
Fragment:UNP RESIDUES 215-263,219-263,219-263,219-263,219-267
|
Mutation:G59A, G104A, G149A, 1G94A, G239A
Mutation:G59A, G104A, G149A, 1G94A, G239A
Mutation:G59A, G104A, G149A, 1G94A, G239A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 27.3% PEG MME 2000
|
Resolution 3.10 Å
R-free 0.315
|
|
5H7B
Crystal structure of a repeat protein with five Protein A repeat modules
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
215–263(49 aa)
Fragment:UNP RESIDUES 215-263,219-263,219-263,219-263,219-267
Chain B
219–263(45 aa)
Fragment:UNP RESIDUES 215-263,219-263,219-263,219-263,219-267
Chain B
219–267(49 aa)
Fragment:UNP RESIDUES 215-263,219-263,219-263,219-263,219-267
|
Mutation:G59A, G104A, G149A, 1G94A, G239A
Mutation:G59A, G104A, G149A, 1G94A, G239A
Mutation:G59A, G104A, G149A, 1G94A, G239A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 27.3% PEG MME 2000
|
Resolution 3.10 Å
R-free 0.315
|
|
5H7C
Crystal structure of a repeat protein with two Protein A-DHR14 repeat modules
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
215–267(53 aa)
Fragment:UNP RESIDUES 215-267,219-267
Chain A
219–267(49 aa)
Fragment:UNP RESIDUES 215-267,219-267
|
Mutation:10 mutations
Mutation:10 mutations
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 8;296 K;0.1M Tris pH 8.0, 33.75%(w/v) PEG MME 2000
|
Resolution 2.70 Å
R-free 0.262
|
|
5H7C
Crystal structure of a repeat protein with two Protein A-DHR14 repeat modules
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain C
215–267(53 aa)
Fragment:UNP RESIDUES 215-267,219-267
Chain C
219–267(49 aa)
Fragment:UNP RESIDUES 215-267,219-267
|
Mutation:10 mutations
Mutation:10 mutations
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 8;296 K;0.1M Tris pH 8.0, 33.75%(w/v) PEG MME 2000
|
Resolution 2.70 Å
R-free 0.262
|
|
5H7D
Crystal structure of the YgjG-protein A-Zpa963-calmodulin complex
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain A
220–267(48 aa)
Fragment:UNP RESIDUES 7-453,UNP RESIDUES 220-267
Chain B
220–267(48 aa)
Fragment:UNP RESIDUES 7-453,UNP RESIDUES 220-267
Chain C
220–267(48 aa)
Fragment:UNP RESIDUES 7-453,UNP RESIDUES 220-267
Chain D
220–267(48 aa)
Fragment:UNP RESIDUES 7-453,UNP RESIDUES 220-267
|
Mutation:N222V, G240A
Mutation:N222V, G240A
Mutation:N222V, G240A
Mutation:N222V, G240A
|
CA CALCIUM ION × 8
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 7.5;296 K;0.1M HEPES pH 7.5, 20.7% PEG 300, 99mM calcium chloride
|
Resolution 2.57 Å
R-free 0.241
|
|
5H7D
Crystal structure of the YgjG-protein A-Zpa963-calmodulin complex
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Insufficient information
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain I
220–267(48 aa)
Fragment:UNP RESIDUES 7-453,UNP RESIDUES 220-267
Chain J
220–267(48 aa)
Fragment:UNP RESIDUES 7-453,UNP RESIDUES 220-267
Chain M
220–267(48 aa)
Fragment:UNP RESIDUES 7-453,UNP RESIDUES 220-267
Chain N
220–267(48 aa)
Fragment:UNP RESIDUES 7-453,UNP RESIDUES 220-267
|
Mutation:N222V, G240A
Mutation:N222V, G240A
Mutation:N222V, G240A
Mutation:N222V, G240A
|
CA CALCIUM ION × 8
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 7.5;296 K;0.1M HEPES pH 7.5, 20.7% PEG 300, 99mM calcium chloride
|
Resolution 2.57 Å
R-free 0.241
|
|
5X3F
Crystal structure of the YgjG-Protein A-Zpa963-PKA catalytic domain
Deposited 2017-02-05
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain A
220–269(50 aa)
Fragment:UNP RESIDUES 7-453,220-269
|
Mutation:N222V, G240A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 5.5;296 K;91mM MES pH 5.5, 2.33M Na formate
|
Resolution 3.38 Å
R-free 0.227
|
|
5XBY
Crystal structure of the PKA-Protein A fusion protein (end-to-end fusion)
Deposited 2017-03-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
217–269(53 aa)
Fragment:UNP RESIDUES 5-44,UNP RESIDUES 217-269
Chain B
217–269(53 aa)
Fragment:UNP RESIDUES 5-44,UNP RESIDUES 217-269
|
Mutation:G240A
Mutation:G240A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 8.5;296 K;100mM Tris pH 8.5, 2.16M Sodium formate
|
Resolution 3.25 Å
R-free 0.307
|
|
5XBY
Crystal structure of the PKA-Protein A fusion protein (end-to-end fusion)
Deposited 2017-03-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Insufficient information
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain C
217–269(53 aa)
Fragment:UNP RESIDUES 5-44,UNP RESIDUES 217-269
Chain D
217–269(53 aa)
Fragment:UNP RESIDUES 5-44,UNP RESIDUES 217-269
|
Mutation:G240A
Mutation:G240A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 8.5;296 K;100mM Tris pH 8.5, 2.16M Sodium formate
|
Resolution 3.25 Å
R-free 0.307
|
|
6KRV
Crystal structure of mouse IgG2b Fc complexed with B domain of Protein A
Deposited 2019-08-22
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Other combination
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain D
212–269(58 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;60% (v/v) Tacsimate (pH 7.0)
|
Resolution 3.30 Å
R-free 0.250
|
|
6KRV
Crystal structure of mouse IgG2b Fc complexed with B domain of Protein A
Deposited 2019-08-22
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Other combination
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain D
212–269(58 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;60% (v/v) Tacsimate (pH 7.0)
|
Resolution 3.30 Å
R-free 0.250
|
|
7EOY
Engineered Hepatitis B virus core antigen T=3
Deposited 2021-04-24
|
Different construct
Different mutation/modification
Different oligomeric state
Different structure-quality metrics
|
Assembly 1
Insufficient information
Homooligomer;Protein × 180
PDB declaration: 180-meric
|
Chain A
212–269(58 aa)
Chain B
212–269(58 aa)
Chain C
212–269(58 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.60 Å
|
|
7EOY
Engineered Hepatitis B virus core antigen T=3
Deposited 2021-04-24
|
Different construct
Different mutation/modification
Different oligomeric state
Different structure-quality metrics
|
Assembly 2
Insufficient information
Homooligomer;Protein × 3
PDB declaration: trimeric
|
Chain A
212–269(58 aa)
Chain B
212–269(58 aa)
Chain C
212–269(58 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.60 Å
|
|
7EOY
Engineered Hepatitis B virus core antigen T=3
Deposited 2021-04-24
|
Different construct
Different mutation/modification
Different oligomeric state
Different structure-quality metrics
|
Assembly 3
Insufficient information
Homooligomer;Protein × 15
PDB declaration: pentadecameric
|
Chain A
212–269(58 aa)
Chain B
212–269(58 aa)
Chain C
212–269(58 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.60 Å
|
|
7EOY
Engineered Hepatitis B virus core antigen T=3
Deposited 2021-04-24
|
Different construct
Different mutation/modification
Different oligomeric state
Different structure-quality metrics
|
Assembly 4
Insufficient information
Homooligomer;Protein × 18
PDB declaration: octadecameric
|
Chain A
212–269(58 aa)
Chain B
212–269(58 aa)
Chain C
212–269(58 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.60 Å
|
|
7EOY
Engineered Hepatitis B virus core antigen T=3
Deposited 2021-04-24
|
Different construct
Different mutation/modification
Different oligomeric state
Different structure-quality metrics
|
Assembly 5
Insufficient information
Homooligomer;Protein × 3
PDB declaration: trimeric
|
Chain A
212–269(58 aa)
Chain B
212–269(58 aa)
Chain C
212–269(58 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.60 Å
|
|
7EP6
Engineered Hepatitis B virus core antigen T=4
Deposited 2021-04-26
|
Different construct
Different mutation/modification
Different oligomeric state
Different structure-quality metrics
|
Assembly 1
Insufficient information
Homooligomer;Protein × 240
PDB declaration: 240-meric
|
Chain A
212–269(58 aa)
Chain B
212–269(58 aa)
Chain C
212–269(58 aa)
Chain D
212–269(58 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.86 Å
|
|
7EP6
Engineered Hepatitis B virus core antigen T=4
Deposited 2021-04-26
|
Different construct
Different mutation/modification
Different oligomeric state
Different structure-quality metrics
|
Assembly 2
Insufficient information
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain A
212–269(58 aa)
Chain B
212–269(58 aa)
Chain C
212–269(58 aa)
Chain D
212–269(58 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.86 Å
|
|
7EP6
Engineered Hepatitis B virus core antigen T=4
Deposited 2021-04-26
|
Different construct
Different mutation/modification
Different oligomeric state
Different structure-quality metrics
|
Assembly 3
Insufficient information
Homooligomer;Protein × 20
PDB declaration: eicosameric
|
Chain A
212–269(58 aa)
Chain B
212–269(58 aa)
Chain C
212–269(58 aa)
Chain D
212–269(58 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.86 Å
|
|
7EP6
Engineered Hepatitis B virus core antigen T=4
Deposited 2021-04-26
|
Different construct
Different mutation/modification
Different oligomeric state
Different structure-quality metrics
|
Assembly 4
Insufficient information
Homooligomer;Protein × 24
PDB declaration: 24-meric
|
Chain A
212–269(58 aa)
Chain B
212–269(58 aa)
Chain C
212–269(58 aa)
Chain D
212–269(58 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.86 Å
|
|
7EP6
Engineered Hepatitis B virus core antigen T=4
Deposited 2021-04-26
|
Different construct
Different mutation/modification
Different oligomeric state
Different structure-quality metrics
|
Assembly 5
Insufficient information
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain A
212–269(58 aa)
Chain B
212–269(58 aa)
Chain C
212–269(58 aa)
Chain D
212–269(58 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.86 Å
|
|
7FDJ
Engineered Hepatitis B virus core antigen with short linker T=4
Deposited 2021-07-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different structure-quality metrics
|
Assembly 1
Insufficient information
Homooligomer;Protein × 240
PDB declaration: 240-meric
|
Chain A
212–269(58 aa)
Chain B
212–269(58 aa)
Chain C
212–269(58 aa)
Chain D
212–269(58 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.40 Å
|
|
7FDJ
Engineered Hepatitis B virus core antigen with short linker T=4
Deposited 2021-07-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different structure-quality metrics
|
Assembly 2
Insufficient information
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain A
212–269(58 aa)
Chain B
212–269(58 aa)
Chain C
212–269(58 aa)
Chain D
212–269(58 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.40 Å
|
|
7FDJ
Engineered Hepatitis B virus core antigen with short linker T=4
Deposited 2021-07-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different structure-quality metrics
|
Assembly 3
Insufficient information
Homooligomer;Protein × 20
PDB declaration: eicosameric
|
Chain A
212–269(58 aa)
Chain B
212–269(58 aa)
Chain C
212–269(58 aa)
Chain D
212–269(58 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.40 Å
|
|
7FDJ
Engineered Hepatitis B virus core antigen with short linker T=4
Deposited 2021-07-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different structure-quality metrics
|
Assembly 4
Insufficient information
Homooligomer;Protein × 24
PDB declaration: 24-meric
|
Chain A
212–269(58 aa)
Chain B
212–269(58 aa)
Chain C
212–269(58 aa)
Chain D
212–269(58 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.40 Å
|
|
7FDJ
Engineered Hepatitis B virus core antigen with short linker T=4
Deposited 2021-07-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different structure-quality metrics
|
Assembly 5
Insufficient information
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain A
212–269(58 aa)
Chain B
212–269(58 aa)
Chain C
212–269(58 aa)
Chain D
212–269(58 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.40 Å
|
|
7NHA
1918 H1N1 Viral influenza polymerase heterotrimer - Endonuclease and priming loop ordered (Class2a)
Deposited 2021-02-10
|
Different oligomeric state
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 3
PDB declaration: pentameric
|
Chain C
158–271(114 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE;3.5 second blot and 3 microlitres sample.
|
Resolution 2.91 Å
|
|
7NHC
1918 H1N1 Viral influenza polymerase heterotrimer - Endonuclease ordered (Class2b)
Deposited 2021-02-10
|
Different oligomeric state
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 3
PDB declaration: pentameric
|
Chain C
158–271(114 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE;3.5 second blot and 3 microlitres sample.
|
Resolution 2.87 Å
|
|
7NHX
1918 H1N1 Viral influenza polymerase heterotrimer - full transcriptase (Class1)
Deposited 2021-02-11
|
Different oligomeric state
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 3
PDB declaration: pentameric
|
Chain C
158–271(114 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE;3.5 second blot and 3 microlitres sample.
|
Resolution 3.23 Å
|
|
7NI0
1918 H1N1 Viral influenza polymerase heterotrimer - Replicase (class 3)
Deposited 2021-02-11
|
Different oligomeric state
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 3
PDB declaration: pentameric
|
Chain C
158–271(114 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE;3.5 second blot and 3 microlitres sample.
|
Resolution 3.32 Å
|
|
7NIK
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8189 core
Deposited 2021-02-12
|
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 4
PDB declaration: hexameric
|
Chain C
158–271(114 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 6.20 Å
|
|
7NIL
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8190 core
Deposited 2021-02-12
|
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 4
PDB declaration: hexameric
|
Chain C
158–271(114 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 5.01 Å
|
|
7NIR
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8191 core
Deposited 2021-02-13
|
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 4
PDB declaration: hexameric
|
Chain C
158–271(114 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 6.70 Å
|
|
7NIS
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8192 core
Deposited 2021-02-13
|
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 4
PDB declaration: hexameric
|
Chain C
158–271(114 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 5.96 Å
|
|
7NJ3
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8196 core
Deposited 2021-02-15
|
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 4
PDB declaration: hexameric
|
Chain C
158–271(114 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.48 Å
|
|
7NJ4
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8198 core
Deposited 2021-02-16
|
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 4
PDB declaration: hexameric
|
Chain C
158–271(114 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 5.84 Å
|
|
7NJ5
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8199 core
Deposited 2021-02-16
|
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 4
PDB declaration: hexameric
|
Chain C
158–271(114 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.63 Å
|
|
7NK1
1918 Influenza virus polymerase heterotirmer in complex with vRNA promoters and Nb8201
Deposited 2021-02-17
|
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 4
PDB declaration: hexameric
|
Chain C
158–271(114 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.22 Å
|
|
7NK2
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8202 core
Deposited 2021-02-17
|
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 4
PDB declaration: hexameric
|
Chain C
158–271(114 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.84 Å
|
|
8CPL
YZw2 a scaffold for cryo-EM of small proteins of interest
Deposited 2023-03-03
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain A
220–269(50 aa)
Chain B
220–269(50 aa)
Chain C
220–269(50 aa)
Chain D
220–269(50 aa)
|
Not recorded
|
PLP PYRIDOXAL-5'-PHOSPHATE × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;16.6% w/v PEG3350, 0.2M NaF and 0.1M Bis-Tris Propane pH 5.5
|
Resolution 1.60 Å
R-free 0.210
|
|
8DA3
Coevolved affibody-Z domain pair LL1.c1
Deposited 2022-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
213–269(57 aa)
|
Mutation:Q9L, F13I, L17F, G29A, I31F
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
SO4 SULFATE ION × 1
MLI MALONATE ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 9;295 K;2.4 M Ammonium Sulfate
0.1 M bicine pH 9.0
Cryoprotected with sodium malonate
|
Resolution 1.06 Å
R-free 0.168
|
|
8DA4
Coevolved affibody-Z domain pair LL1.c2
Deposited 2022-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
213–269(57 aa)
|
Mutation:Q9L, F13I, G29A, I31F
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 4.6;295 K;2.5 M AmmSO4, 0.1 M NaOAc pH 4.6
cryoprotected with Na malonate
|
Resolution 1.92 Å
R-free 0.247
|
|
8DA4
Coevolved affibody-Z domain pair LL1.c2
Deposited 2022-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
213–269(57 aa)
|
Mutation:Q9L, F13I, G29A, I31F
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
SO4 SULFATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 4.6;295 K;2.5 M AmmSO4, 0.1 M NaOAc pH 4.6
cryoprotected with Na malonate
|
Resolution 1.92 Å
R-free 0.247
|
|
8DA4
Coevolved affibody-Z domain pair LL1.c2
Deposited 2022-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain E
213–269(57 aa)
|
Mutation:Q9L, F13I, G29A, I31F
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 4.6;295 K;2.5 M AmmSO4, 0.1 M NaOAc pH 4.6
cryoprotected with Na malonate
|
Resolution 1.92 Å
R-free 0.247
|
|
8DA5
Coevolved affibody-Z domain pair LL1.c4
Deposited 2022-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
212–269(58 aa)
|
Mutation:Q9F, F13I, G29A, I31F
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8.5;295 K;2.3 M AmmPO4, 100 mM Tris pH 8.5
cryoprotected with 30% glycerol
|
Resolution 1.00 Å
R-free 0.191
|
|
8DA5
Coevolved affibody-Z domain pair LL1.c4
Deposited 2022-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
212–269(58 aa)
|
Mutation:Q9F, F13I, G29A, I31F
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8.5;295 K;2.3 M AmmPO4, 100 mM Tris pH 8.5
cryoprotected with 30% glycerol
|
Resolution 1.00 Å
R-free 0.191
|
|
8DA6
Coevolved affibody-Z domain pair LL1.c5
Deposited 2022-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
213–269(57 aa)
|
Mutation:Q9F, F13I, G29A, I31F
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 5;295 K;2.4 M ammonium Sulfate
0.1 M citric acid pH 5.0
cryoprotected with sodium malonate
|
Resolution 1.50 Å
R-free 0.251
|
|
8DA6
Coevolved affibody-Z domain pair LL1.c5
Deposited 2022-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
213–269(57 aa)
|
Mutation:Q9F, F13I, G29A, I31F
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 5;295 K;2.4 M ammonium Sulfate
0.1 M citric acid pH 5.0
cryoprotected with sodium malonate
|
Resolution 1.50 Å
R-free 0.251
|
|
8DA7
Coevolved affibody-Z domain pair LL1.c6
Deposited 2022-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
213–269(57 aa)
|
Mutation:Q9L, F13I, G29A, I31F
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
MLI MALONATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8.5;295 K;2.5 M AmmSO4, 100 mM tris pH 8.5
cryoprotected with Na malonate
|
Resolution 1.02 Å
R-free 0.183
|
|
8DA8
Coevolved affibody-Z domain pair LL2.c1
Deposited 2022-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
213–269(57 aa)
|
Mutation:Q9L F13V, G29A, I31F
|
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7;295 K;2.5 M ammonium sulfate
100 mM HEPES pH 7.0
Cryoprotected with 30% glycerol
|
Resolution 1.29 Å
R-free 0.235
|
|
8DA9
Coevolved affibody-Z domain pair LL2.c3
Deposited 2022-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
213–269(57 aa)
|
Mutation:Q9L, F13V, G29A, I31F
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
GOL GLYCEROL × 1
SO4 SULFATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7;295 K;2.4 M Ammonium sulfate
0.1M HEPES pH 7.0
Cryoprotected with 30% glycerol
|
Resolution 1.35 Å
R-free 0.198
|
|
8DA9
Coevolved affibody-Z domain pair LL2.c3
Deposited 2022-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
213–269(57 aa)
|
Mutation:Q9L, F13V, G29A, I31F
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
GOL GLYCEROL × 1
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7;295 K;2.4 M Ammonium sulfate
0.1M HEPES pH 7.0
Cryoprotected with 30% glycerol
|
Resolution 1.35 Å
R-free 0.198
|
|
8DAA
Coevolved affibody-Z domain pair LL2.c7
Deposited 2022-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
213–269(57 aa)
|
Mutation:Q9L, F13V, G29A, I31F
|
MLI MALONATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7;295 K;3.0 M Ammonium sulfate,
100 mM HEPES pH 7.0
cryoprotected with sodium malonate
|
Resolution 1.75 Å
R-free 0.298
|
|
8DAA
Coevolved affibody-Z domain pair LL2.c7
Deposited 2022-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
213–269(57 aa)
|
Mutation:Q9L, F13V, G29A, I31F
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7;295 K;3.0 M Ammonium sulfate,
100 mM HEPES pH 7.0
cryoprotected with sodium malonate
|
Resolution 1.75 Å
R-free 0.298
|
|
8DAB
Coevolved affibody-Z domain pair LL2.c17
Deposited 2022-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
213–269(57 aa)
|
Mutation:Q9V, G29A, I31V
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8.2;295 K;2.3 M Amm2HPO4, 100 mM Tris pH 8.2
cryoprotected in 30% glycerol
|
Resolution 1.13 Å
R-free 0.200
|
|
8DAC
Coevolved affibody-Z domain pair LL2.c22
Deposited 2022-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
213–269(57 aa)
|
Mutation:Q9I, F13V, L17F, G29A, I31F
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8.2;295 K;2.5 M AmmSO4, 100 mM Tris pH 8.2
Cryoprotected with 30% glycerol
|
Resolution 1.19 Å
R-free 0.196
|
|
8JXR
Structure of nanobody-bound DRD1_LSD complex
Deposited 2023-07-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain C
289–327(39 aa)
|
Mutation:E360Q,K363A,D364F,T367I,R368L
|
7LD (8alpha)-N,N-diethyl-6-methyl-9,10-didehydroergoline-8-carboxamide × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.57 Å
|
|
8JXS
Structure of nanobody-bound DRD1_PF-6142 complex
Deposited 2023-07-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain C
289–327(39 aa)
|
Mutation:E360Q,K363A,D364F,T367I,R368L,D404E,A405H
|
V6X 4-[3-methyl-4-(6-methylimidazo[1,2-a]pyrazin-5-yl)phenoxy]furo[3,2-c]pyridine × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.00 Å
|
|
8R2P
YZwIdeal x16 a scaffold for cryo-EM of small proteins of interest crystallizing in space group 19 (P 21 21 21)
Deposited 2023-11-07
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain A
218–269(52 aa)
Chain B
218–269(52 aa)
Chain C
218–269(52 aa)
Chain D
218–269(52 aa)
|
Mutation:G487A
Mutation:G487A
Mutation:G487A
Mutation:G487A
|
PLP PYRIDOXAL-5'-PHOSPHATE × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;277 K;50% w/v PEG200, 0.2M MgCl2 and 0.1M Sodium Cacodylate buffer pH 6.5
|
Resolution 2.22 Å
R-free 0.230
|
|
9QU4
Cryo-EM structure of the inward-open choline-bound state of choline/ethanolamine transporter FLVCR2
Deposited 2025-04-10
|
Different construct
Different oligomeric state
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Insufficient information
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
159–321(163 aa)
|
Not recorded
|
CHT CHOLINE ION × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.39 Å
|
|
9W3K
GPR151-Legobody complex
Deposited 2025-07-29
|
Different construct
Different oligomeric state
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain C
289–327(39 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.08 Å
|