Capsid protein,Immunoglobulin G-binding protein A
Hepatitis B virus genotype C subtype adr (strain Japan/adr4/1983)
State in the Current Structure
| Assembly | Oligomeric State | Construct | Mutations and Modifications | Ligands, Ions and Associated Components | Method and Experimental Conditions | Structure Quality |
|---|---|---|---|---|---|---|
| 1 | Insufficient information Homooligomer Protein × 240 PDB declaration: 240-meric（240） Consistent with protein copy count | Chain A； UniProt 212–269 Chain A； UniProt 212–269 Chain B； UniProt 212–269 Chain B； UniProt 212–269 Chain C； UniProt 212–269 Chain C； UniProt 212–269 Chain D； UniProt 212–269 Chain D； UniProt 212–269 | Not recorded | No other associated polymer | ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE | Resolution 4.40 Å |
| 2 | Insufficient information Homooligomer Protein × 4 PDB declaration: tetrameric（4） Consistent with protein copy count | Chain A； UniProt 212–269 Chain A； UniProt 212–269 Chain B； UniProt 212–269 Chain B； UniProt 212–269 Chain C； UniProt 212–269 Chain C； UniProt 212–269 Chain D； UniProt 212–269 Chain D； UniProt 212–269 | Not recorded | No other associated polymer | ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE | Resolution 4.40 Å |
| 3 | Insufficient information Homooligomer Protein × 20 PDB declaration: eicosameric（20） Consistent with protein copy count | Chain A； UniProt 212–269 Chain A； UniProt 212–269 Chain B； UniProt 212–269 Chain B； UniProt 212–269 Chain C； UniProt 212–269 Chain C； UniProt 212–269 Chain D； UniProt 212–269 Chain D； UniProt 212–269 | Not recorded | No other associated polymer | ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE | Resolution 4.40 Å |
| 4 | Insufficient information Homooligomer Protein × 24 PDB declaration: 24-meric（24） Consistent with protein copy count | Chain A； UniProt 212–269 Chain A； UniProt 212–269 Chain B； UniProt 212–269 Chain B； UniProt 212–269 Chain C； UniProt 212–269 Chain C； UniProt 212–269 Chain D； UniProt 212–269 Chain D； UniProt 212–269 | Not recorded | No other associated polymer | ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE | Resolution 4.40 Å |
| 5 | Insufficient information Homooligomer Protein × 4 PDB declaration: tetrameric（4） Consistent with protein copy count | Chain A； UniProt 212–269 Chain A； UniProt 212–269 Chain B； UniProt 212–269 Chain B； UniProt 212–269 Chain C； UniProt 212–269 Chain C； UniProt 212–269 Chain D； UniProt 212–269 Chain D； UniProt 212–269 | Not recorded | No other associated polymer | ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE | Resolution 4.40 Å |
Other States of the Same Protein in the Database
Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.
| Other PDB | Difference from Current Entry 7FDJ | Assembly / Oligomeric State | Construct | Mutations and Modifications | Ligands, Ions and Non-polymers | Method and Experimental Conditions | Structure Quality |
|---|---|---|---|---|---|---|---|
| 1BDC STAPHYLOCOCCUS AUREUS PROTEIN A, IMMUNOGLOBULIN-BINDING B DOMAIN, NMR, 10 STRUCTURES Deposited 1996-06-28 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
212–270（59 aa）
Fragment：B DOMAIN
|
Not recorded | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 5；303 K
|
Resolution not provided |
| 1BDD STAPHYLOCOCCUS AUREUS PROTEIN A, IMMUNOGLOBULIN-BINDING B DOMAIN, NMR, MINIMIZED AVERAGE STRUCTURE Deposited 1996-06-28 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
212–270（59 aa）
Fragment：B DOMAIN
|
Not recorded | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 5；303 K
|
Resolution not provided |
| 1EDI STAPHYLOCOCCAL PROTEIN A E-DOMAIN (180), NMR, MINIMIZED AVERAGE STRUCTURE Deposited 1996-10-07 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
37–92（56 aa）
Fragment：E-DOMAIN
|
Not recorded | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 5.7；298 K
|
Resolution not provided |
| 1EDJ STAPHYLOCOCCAL PROTEIN A E-DOMAIN (180), NMR, 20 STRUCTURES Deposited 1996-10-07 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
37–92（56 aa）
Fragment：E-DOMAIN (180)
|
Not recorded | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 5.7；298 K
|
Resolution not provided |
| 1EDK STAPHYLOCOCCAL PROTEIN A E-DOMAIN (-60), NMR, MINIMIZED AVERAGE STRUCTURE Deposited 1996-07-22 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
37–92（56 aa）
Fragment：E-DOMAIN
|
Not recorded | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 5.7；298 K
|
Resolution not provided |
| 1EDL STAPHYLOCOCCAL PROTEIN A E-DOMAIN (-60), NMR, 22 STRUCTURES Deposited 1996-07-22 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
37–92（56 aa）
Fragment：E-DOMAIN
|
Not recorded | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 5.7；298 K
|
Resolution not provided |
| 1LP1 Protein Z in complex with an in vitro selected affibody Deposited 2002-05-07 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain B
212–269（58 aa）
Fragment：RESIDUES 2-58
|
Mutation：A1V, G29A | SO4 SULFATE ION × 4 MG MAGNESIUM ION × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6.5；298 K；MgSO4, MES, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
|
Resolution 2.30 Å R-free 0.256 |
| 1LP1 Protein Z in complex with an in vitro selected affibody Deposited 2002-05-07 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein heterocomplex Heteromer；Protein × 4 PDB declaration: tetrameric |
Chain B
212–269（58 aa）
Fragment：RESIDUES 2-58
|
Mutation：A1V, G29A | SO4 SULFATE ION × 8 MG MAGNESIUM ION × 2 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6.5；298 K；MgSO4, MES, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
|
Resolution 2.30 Å R-free 0.256 |
| 1Q2N REFINED Solution NMR structure of the Z domain of STAPHYLOCOCCAL PROTEIN A Deposited 2003-07-25 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
212–269（58 aa）
Fragment：residues 212-269
|
Not recorded | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 6.5；303 K；Ionic strength (raw mmCIF value) 20 mM NH4OAc；Pressure 1
NMR sample composition
1mM Z domain U-15N,13C; 20mM NH4OAc buffer; 95% H2O, 5% D2O. | 95% H2O/5% D2O
|
Resolution not provided |
| 1SS1 STAPHYLOCOCCAL PROTEIN A, B-DOMAIN, Y15W MUTANT, NMR, 25 STRUCTURES Deposited 2004-03-23 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
212–270（59 aa）
Fragment：B DOMAIN
|
Mutation：Y15W | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 5.5；298 K；Ionic strength (raw mmCIF value) 100 mM NaCl / 50 mM acetate；Pressure ambient
NMR sample composition
2mM sample, U-13C, U-15N; 50 mM D-acetate buffer, 100 mM NaCl, pH 5.5; 90% H2O, 10% D2O | 90% H20, 10% D20
|
Resolution not provided |
| 2JWD protein A Deposited 2007-10-09 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
213–269（57 aa）
Fragment：B domain
|
Mutation：Y15W | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 5；298 K；Ionic strength (raw mmCIF value) 100；Pressure ambient
NMR sample composition
20mM sodium acetate, 100mM sodium chloride, 90% H2O/10% D2O | 90% H2O/10% D2O
|
Resolution not provided |
| 2M5A Protein A binding by an engineered Affibody molecule Deposited 2013-02-19 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
213–269（57 aa）
|
Not recorded | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 5.6；298 K；Ionic strength (raw mmCIF value) 0.095；Pressure ambient
NMR sample composition
0.5 to 1 mM [U-99% 13C; U-99% 15N] Z domain, 25% molar excess mM ZpA963, 93% H2O/7% D2O | 93% H2O/7% D2O
NMR sample composition
0.5 to 1.0 mM [U-99% 13C; U-99% 15N] ZpA963, 25 5 molar excess mM Z domain, 93% H2O/7% D2O | 93% H2O/7% D2O
|
Resolution not provided |
| 2SPZ STAPHYLOCOCCAL PROTEIN A, Z-DOMAIN, NMR, 10 STRUCTURES Deposited 1998-07-29 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
212–269（58 aa）
Fragment：Z DOMAIN
|
Mutation：A1V, G29A | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 6.5；303 K；Ionic strength (raw mmCIF value) 10 MILLIMOLAR K2HPO4；Pressure 1
|
Resolution not provided |
| 3MZW HER2 extracelluar region with affinity matured 3-helix affibody ZHER2:342 Deposited 2010-05-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Other combination Heteromer；Protein × 2 PDB declaration: dimeric |
Chain B
212–269（58 aa）
Fragment：B 4 repeat domain residues 212-269
|
Mutation：A212V, Q220M, Q221R, F224Y, Y225W, L228A, H229L, E235N, E236Q, R238K, N239R, G240A, Q243R, K246Y | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 5；279 K；0.05M sodium chloride, 7.5% PEG3350, 0.1M ammonium acetate, VAPOR DIFFUSION, HANGING DROP, temperature 279K
|
Resolution 2.90 Å R-free 0.278 |
| 4NPD High-resolution structure of C domain of staphylococcal protein A at cryogenic temperature Deposited 2013-11-21 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
270–327（58 aa）
Fragment：UNP residues 270-327
|
Not recorded | ZN ZINC ION × 2 SCN THIOCYANATE ION × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7；298 K；Na Thiocyanate, PEG 3350, Glycerol, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 298K
|
Resolution 0.90 Å R-free 0.130 |
| 4NPE High-resolution structure of C domain of staphylococcal protein A at room temperature Deposited 2013-11-21 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
270–327（58 aa）
Fragment：UNP residues 270-327
|
Not recorded | ZN ZINC ION × 1 SCN THIOCYANATE ION × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7；298 K；Na Thiocyanate, PEG 3350, Glycerol, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 298K
|
Resolution 1.42 Å R-free 0.143 |
| 4NPF High-resolution structure of two tandem B domains of staphylococcal protein A connected by the conserved linker Deposited 2013-11-21 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain Y
154–269（116 aa）
Fragment：UNP residues 212-323
|
Mutation：W13F, W113F | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6；298 K；Ammonium Sulfate, MES, pH 6, vapor diffusion, sitting drop, temperature 298K
|
Resolution 1.49 Å R-free 0.185 |
| 4NPF High-resolution structure of two tandem B domains of staphylococcal protein A connected by the conserved linker Deposited 2013-11-21 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain X
154–269（116 aa）
Fragment：UNP residues 212-323
|
Mutation：W13F, W113F | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6；298 K；Ammonium Sulfate, MES, pH 6, vapor diffusion, sitting drop, temperature 298K
|
Resolution 1.49 Å R-free 0.185 |
| 4WWI Crystal structure of the C domain of staphylococcal protein A in complex with the Fc fragment of human IgG at 2.3 Angstrom resolution Deposited 2014-11-11 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
270–327（58 aa）
Fragment：UNP residues 270-327
|
Not recorded | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8；298 K；NaOAc, ammonium sulfate, PEG 5K MME, glycerol
|
Resolution 2.31 Å R-free 0.251 |
| 4WWI Crystal structure of the C domain of staphylococcal protein A in complex with the Fc fragment of human IgG at 2.3 Angstrom resolution Deposited 2014-11-11 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain B
270–327（58 aa）
Fragment：UNP residues 270-327
|
Not recorded | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8；298 K；NaOAc, ammonium sulfate, PEG 5K MME, glycerol
|
Resolution 2.31 Å R-free 0.251 |
| 4WWI Crystal structure of the C domain of staphylococcal protein A in complex with the Fc fragment of human IgG at 2.3 Angstrom resolution Deposited 2014-11-11 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 3 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain C
270–327（58 aa）
Fragment：UNP residues 270-327
|
Not recorded | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8；298 K；NaOAc, ammonium sulfate, PEG 5K MME, glycerol
|
Resolution 2.31 Å R-free 0.251 |
| 4ZMD C domain of staphylococcal protein A mutant - Q9W Deposited 2015-05-03 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
270–327（58 aa）
Fragment：UNP residues 270-327
|
Mutation：Q9W | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；298 K；PEG 3350, sodium thiocyanate
|
Resolution 1.87 Å R-free 0.256 |
| 4ZMD C domain of staphylococcal protein A mutant - Q9W Deposited 2015-05-03 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain B
270–327（58 aa）
Fragment：UNP residues 270-327
|
Mutation：Q9W | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；298 K；PEG 3350, sodium thiocyanate
|
Resolution 1.87 Å R-free 0.256 |
| 4ZNC Fc fragment of human IgG in complex with the C domain of staphylococcal protein A mutant - Q9W Deposited 2015-05-04 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
270–327（58 aa）
Fragment：UNP residues 270-327
|
Mutation：Q9W | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 5.6；298 K；PEG 5000 MME, ammonium sulfate, sodium acetate
|
Resolution 2.28 Å R-free 0.242 |
| 4ZNC Fc fragment of human IgG in complex with the C domain of staphylococcal protein A mutant - Q9W Deposited 2015-05-04 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain B
270–327（58 aa）
Fragment：UNP residues 270-327
|
Mutation：Q9W | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 5.6；298 K；PEG 5000 MME, ammonium sulfate, sodium acetate
|
Resolution 2.28 Å R-free 0.242 |
| 4ZNC Fc fragment of human IgG in complex with the C domain of staphylococcal protein A mutant - Q9W Deposited 2015-05-04 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 3 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain C
270–327（58 aa）
Fragment：UNP residues 270-327
|
Mutation：Q9W | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 5.6；298 K；PEG 5000 MME, ammonium sulfate, sodium acetate
|
Resolution 2.28 Å R-free 0.242 |
| 5CBN Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus with chemical cross-linker EY-CBS Deposited 2015-07-01 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
218–269（52 aa）
Fragment：B4 domain (UNP RESIDUES 218-269)
|
Mutation：E126A, N129A, E133C, G147A | EYC 2,2'-ethyne-1,2-diylbis{5-[(chloroacetyl)amino]benzenesulfonic acid} × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 6.5；277 K；36% w/v PEG 2000, 0.2M magnesium chloride hexahydrate
|
Resolution 2.30 Å R-free 0.260 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 10 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain J
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 11 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain K
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 12 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain L
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain B
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 3 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain C
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 4 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain D
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 5 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain E
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 6 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain F
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 7 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain G
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 8 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain H
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5CBO Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-01 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 9 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain I
102–153（52 aa）
Fragment：B4 domain (UNP RESIDUES 102-153)
|
Mutation：D1219A, S1222A, E1226C, N1229H, E1236A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 5.5；298 K；34% w/v PPG P-400
10mM Hexaamine cobalt(III) chloride
|
Resolution 2.80 Å R-free 0.254 |
| 5COC Fusion protein of human calmodulin and B4 domain of protein A from staphylococcal aureus Deposited 2015-07-20 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
213–267（55 aa）
Fragment：B4 domain (UNP RESIDUES 213-267),N-terminal (UNP RESIDUES 5-78)
|
Mutation：G240A, K261C, L1005A, T1006A, Q1009C | CA CALCIUM ION × 2 |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；298 K；10% w/v PEG 1000, 10% w/v PEG 8000
|
Resolution 2.67 Å R-free 0.259 |
| 5EWX Fusion protein of T4 lysozyme and B4 domain of protein A from staphylococcal aureus with chemical cross-linker EY-CBS Deposited 2015-11-22 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
212–266（55 aa）
Fragment：UNP RESIDUES 1-35, 219-266, 38-164
|
Mutation：A1212V, G1240A, E1258C, K1261A, L1262A, N40C, C54T, C97A, K162A | EYC 2,2'-ethyne-1,2-diylbis{5-[(chloroacetyl)amino]benzenesulfonic acid} × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 7.5；277 K；1.84M Na/K Phosphate, pH 7.5
|
Resolution 2.60 Å R-free 0.253 |
| 5EWX Fusion protein of T4 lysozyme and B4 domain of protein A from staphylococcal aureus with chemical cross-linker EY-CBS Deposited 2015-11-22 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric |
Chain B
212–266（55 aa）
Fragment：UNP RESIDUES 1-35, 219-266, 38-164
|
Mutation：A1212V, G1240A, E1258C, K1261A, L1262A, N40C, C54T, C97A, K162A | EYC 2,2'-ethyne-1,2-diylbis{5-[(chloroacetyl)amino]benzenesulfonic acid} × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION；pH 7.5；277 K；1.84M Na/K Phosphate, pH 7.5
|
Resolution 2.60 Å R-free 0.253 |
| 5H75 Crystal structure of the MrsD-Protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Homooligomer；Protein × 12 PDB declaration: dodecameric |
Chain A
223–269（47 aa）
Fragment：UNP RESIDUES 1-184,223-269
Chain B
223–269（47 aa）
Fragment：UNP RESIDUES 1-184,223-269
Chain C
223–269（47 aa）
Fragment：UNP RESIDUES 1-184,223-269
Chain D
223–269（47 aa）
Fragment：UNP RESIDUES 1-184,223-269
|
Mutation：K182Q,G240A Mutation：K182Q,G240A Mutation：K182Q,G240A Mutation：K182Q,G240A | FAD FLAVIN-ADENINE DINUCLEOTIDE × 12 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 5.5；277 K；0.94M sodium citrate pH 5.5
|
Resolution 2.74 Å R-free 0.243 |
| 5H76 Crystal structure of the DARPin-Protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
235–267（33 aa）
Fragment：RESIDUES 9-176,177-209 (UNP RESIDUES 235-267)
|
Mutation：G182A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 9.5；296 K；0.63M sodium potassium phosphate pH 9.5
|
Resolution 2.60 Å R-free 0.250 |
| 5H76 Crystal structure of the DARPin-Protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain B
235–267（33 aa）
Fragment：RESIDUES 9-176,177-209 (UNP RESIDUES 235-267)
|
Mutation：G182A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 9.5；296 K；0.63M sodium potassium phosphate pH 9.5
|
Resolution 2.60 Å R-free 0.250 |
| 5H76 Crystal structure of the DARPin-Protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 3 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain C
235–267（33 aa）
Fragment：RESIDUES 9-176,177-209 (UNP RESIDUES 235-267)
|
Mutation：G182A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 9.5；296 K；0.63M sodium potassium phosphate pH 9.5
|
Resolution 2.60 Å R-free 0.250 |
| 5H77 Crystal structure of the PKA-protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Homooligomer；Protein × 2 PDB declaration: dimeric |
Chain A
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain B
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation：G222A, G240A Mutation：G222A, G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å R-free 0.284 |
| 5H77 Crystal structure of the PKA-protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Insufficient information Homooligomer；Protein × 2 PDB declaration: dimeric |
Chain C
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain D
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation：G222A, G240A Mutation：G222A, G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å R-free 0.284 |
| 5H77 Crystal structure of the PKA-protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 3 Insufficient information Homooligomer；Protein × 2 PDB declaration: dimeric |
Chain E
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain F
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation：G222A, G240A Mutation：G222A, G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å R-free 0.284 |
| 5H77 Crystal structure of the PKA-protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 4 Insufficient information Homooligomer；Protein × 2 PDB declaration: dimeric |
Chain G
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain H
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation：G222A, G240A Mutation：G222A, G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å R-free 0.284 |
| 5H77 Crystal structure of the PKA-protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 5 Insufficient information Homooligomer；Protein × 2 PDB declaration: dimeric |
Chain I
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain J
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation：G222A, G240A Mutation：G222A, G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å R-free 0.284 |
| 5H77 Crystal structure of the PKA-protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 6 Insufficient information Homooligomer；Protein × 2 PDB declaration: dimeric |
Chain K
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain L
220–268（49 aa）
Fragment：UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation：G222A, G240A Mutation：G222A, G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å R-free 0.284 |
| 5H79 Crystal structure of a repeat protein with three Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain D
217–263（47 aa）
Fragment：UNP RESIDUES 217-263,UNP RESIDUES 219-263,UNP RESIDUES 219-268
Chain D
219–263（45 aa）
Fragment：UNP RESIDUES 217-263,UNP RESIDUES 219-263,UNP RESIDUES 219-268
Chain D
219–268（50 aa）
Fragment：UNP RESIDUES 217-263,UNP RESIDUES 219-263,UNP RESIDUES 219-268
|
Mutation：G59A, N131A, G149A Mutation：G59A, N131A, G149A Mutation：G59A, N131A, G149A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 13.5%(w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.278 |
| 5H79 Crystal structure of a repeat protein with three Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain C
217–263（47 aa）
Fragment：UNP RESIDUES 217-263,UNP RESIDUES 219-263,UNP RESIDUES 219-268
Chain C
219–263（45 aa）
Fragment：UNP RESIDUES 217-263,UNP RESIDUES 219-263,UNP RESIDUES 219-268
Chain C
219–268（50 aa）
Fragment：UNP RESIDUES 217-263,UNP RESIDUES 219-263,UNP RESIDUES 219-268
|
Mutation：G59A, N131A, G149A Mutation：G59A, N131A, G149A Mutation：G59A, N131A, G149A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 13.5%(w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.278 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain C
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain C
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain C
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 10 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain J
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain J
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain J
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 11 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain K
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain K
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain K
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 12 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain L
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain L
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain L
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain A
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain A
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 3 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain D
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain D
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain D
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 4 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain B
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain B
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain B
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 5 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain E
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain E
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain E
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 6 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain F
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain F
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain F
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 7 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain G
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain G
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain G
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 8 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain H
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain H
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain H
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7A Crystal structure of a repeat protein with four Protein A repeat module Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 9 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain I
215–263（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain I
219–263（45 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
Chain I
219–267（49 aa）
Fragment：UNP RESIDUES 215-263, 219-263, 219-263, 219-267
|
Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A Mutation：G59A, G104A, G149A, G194A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 43.2% (w/v) PEG 1000
|
Resolution 2.70 Å R-free 0.285 |
| 5H7B Crystal structure of a repeat protein with five Protein A repeat modules Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
215–263（49 aa）
Fragment：UNP RESIDUES 215-263,219-263,219-263,219-263,219-267
Chain A
219–263（45 aa）
Fragment：UNP RESIDUES 215-263,219-263,219-263,219-263,219-267
Chain A
219–267（49 aa）
Fragment：UNP RESIDUES 215-263,219-263,219-263,219-263,219-267
|
Mutation：G59A, G104A, G149A, 1G94A, G239A Mutation：G59A, G104A, G149A, 1G94A, G239A Mutation：G59A, G104A, G149A, 1G94A, G239A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 27.3% PEG MME 2000
|
Resolution 3.10 Å R-free 0.315 |
| 5H7B Crystal structure of a repeat protein with five Protein A repeat modules Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain B
215–263（49 aa）
Fragment：UNP RESIDUES 215-263,219-263,219-263,219-263,219-267
Chain B
219–263（45 aa）
Fragment：UNP RESIDUES 215-263,219-263,219-263,219-263,219-267
Chain B
219–267（49 aa）
Fragment：UNP RESIDUES 215-263,219-263,219-263,219-263,219-267
|
Mutation：G59A, G104A, G149A, 1G94A, G239A Mutation：G59A, G104A, G149A, 1G94A, G239A Mutation：G59A, G104A, G149A, 1G94A, G239A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 4.5；296 K；0.1M sodium acetate pH 4.5, 27.3% PEG MME 2000
|
Resolution 3.10 Å R-free 0.315 |
| 5H7C Crystal structure of a repeat protein with two Protein A-DHR14 repeat modules Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
215–267（53 aa）
Fragment：UNP RESIDUES 215-267,219-267
Chain A
219–267（49 aa）
Fragment：UNP RESIDUES 215-267,219-267
|
Mutation：10 mutations Mutation：10 mutations | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 8；296 K；0.1M Tris pH 8.0, 33.75%(w/v) PEG MME 2000
|
Resolution 2.70 Å R-free 0.262 |
| 5H7C Crystal structure of a repeat protein with two Protein A-DHR14 repeat modules Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric |
Chain C
215–267（53 aa）
Fragment：UNP RESIDUES 215-267,219-267
Chain C
219–267（49 aa）
Fragment：UNP RESIDUES 215-267,219-267
|
Mutation：10 mutations Mutation：10 mutations | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 8；296 K；0.1M Tris pH 8.0, 33.75%(w/v) PEG MME 2000
|
Resolution 2.70 Å R-free 0.262 |
| 5H7D Crystal structure of the YgjG-protein A-Zpa963-calmodulin complex Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 8 PDB declaration: octameric |
Chain A
220–267（48 aa）
Fragment：UNP RESIDUES 7-453,UNP RESIDUES 220-267
Chain B
220–267（48 aa）
Fragment：UNP RESIDUES 7-453,UNP RESIDUES 220-267
Chain C
220–267（48 aa）
Fragment：UNP RESIDUES 7-453,UNP RESIDUES 220-267
Chain D
220–267（48 aa）
Fragment：UNP RESIDUES 7-453,UNP RESIDUES 220-267
|
Mutation：N222V, G240A Mutation：N222V, G240A Mutation：N222V, G240A Mutation：N222V, G240A | CA CALCIUM ION × 8 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 7.5；296 K；0.1M HEPES pH 7.5, 20.7% PEG 300, 99mM calcium chloride
|
Resolution 2.57 Å R-free 0.241 |
| 5H7D Crystal structure of the YgjG-protein A-Zpa963-calmodulin complex Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Insufficient information Heteromer；Protein × 8 PDB declaration: octameric |
Chain I
220–267（48 aa）
Fragment：UNP RESIDUES 7-453,UNP RESIDUES 220-267
Chain J
220–267（48 aa）
Fragment：UNP RESIDUES 7-453,UNP RESIDUES 220-267
Chain M
220–267（48 aa）
Fragment：UNP RESIDUES 7-453,UNP RESIDUES 220-267
Chain N
220–267（48 aa）
Fragment：UNP RESIDUES 7-453,UNP RESIDUES 220-267
|
Mutation：N222V, G240A Mutation：N222V, G240A Mutation：N222V, G240A Mutation：N222V, G240A | CA CALCIUM ION × 8 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 7.5；296 K；0.1M HEPES pH 7.5, 20.7% PEG 300, 99mM calcium chloride
|
Resolution 2.57 Å R-free 0.241 |
| 5X3F Crystal structure of the YgjG-Protein A-Zpa963-PKA catalytic domain Deposited 2017-02-05 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 8 PDB declaration: octameric |
Chain A
220–269（50 aa）
Fragment：UNP RESIDUES 7-453,220-269
|
Mutation：N222V, G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 5.5；296 K；91mM MES pH 5.5, 2.33M Na formate
|
Resolution 3.38 Å R-free 0.227 |
| 5XBY Crystal structure of the PKA-Protein A fusion protein (end-to-end fusion) Deposited 2017-03-21 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Homooligomer；Protein × 2 PDB declaration: dimeric |
Chain A
217–269（53 aa）
Fragment：UNP RESIDUES 5-44,UNP RESIDUES 217-269
Chain B
217–269（53 aa）
Fragment：UNP RESIDUES 5-44,UNP RESIDUES 217-269
|
Mutation：G240A Mutation：G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 8.5；296 K；100mM Tris pH 8.5, 2.16M Sodium formate
|
Resolution 3.25 Å R-free 0.307 |
| 5XBY Crystal structure of the PKA-Protein A fusion protein (end-to-end fusion) Deposited 2017-03-21 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Insufficient information Homooligomer；Protein × 2 PDB declaration: dimeric |
Chain C
217–269（53 aa）
Fragment：UNP RESIDUES 5-44,UNP RESIDUES 217-269
Chain D
217–269（53 aa）
Fragment：UNP RESIDUES 5-44,UNP RESIDUES 217-269
|
Mutation：G240A Mutation：G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION；pH 8.5；296 K；100mM Tris pH 8.5, 2.16M Sodium formate
|
Resolution 3.25 Å R-free 0.307 |
| 6KRV Crystal structure of mouse IgG2b Fc complexed with B domain of Protein A Deposited 2019-08-22 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Other combination Heteromer；Protein × 3 PDB declaration: trimeric |
Chain D
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；293 K；60% (v/v) Tacsimate (pH 7.0)
|
Resolution 3.30 Å R-free 0.250 |
| 6KRV Crystal structure of mouse IgG2b Fc complexed with B domain of Protein A Deposited 2019-08-22 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Other combination Heteromer；Protein × 3 PDB declaration: trimeric |
Chain D
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；293 K；60% (v/v) Tacsimate (pH 7.0)
|
Resolution 3.30 Å R-free 0.250 |
| 7EOY Engineered Hepatitis B virus core antigen T=3 Deposited 2021-04-24 | Different construct Different mutation/modification Different oligomeric state Different structure-quality metrics | Assembly 1 Insufficient information Homooligomer；Protein × 180 PDB declaration: 180-meric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.60 Å |
| 7EOY Engineered Hepatitis B virus core antigen T=3 Deposited 2021-04-24 | Different construct Different mutation/modification Different oligomeric state Different structure-quality metrics | Assembly 2 Insufficient information Homooligomer；Protein × 3 PDB declaration: trimeric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.60 Å |
| 7EOY Engineered Hepatitis B virus core antigen T=3 Deposited 2021-04-24 | Different construct Different mutation/modification Different oligomeric state Different structure-quality metrics | Assembly 3 Insufficient information Homooligomer；Protein × 15 PDB declaration: pentadecameric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.60 Å |
| 7EOY Engineered Hepatitis B virus core antigen T=3 Deposited 2021-04-24 | Different construct Different mutation/modification Different oligomeric state Different structure-quality metrics | Assembly 4 Insufficient information Homooligomer；Protein × 18 PDB declaration: octadecameric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.60 Å |
| 7EOY Engineered Hepatitis B virus core antigen T=3 Deposited 2021-04-24 | Different construct Different mutation/modification Different oligomeric state Different structure-quality metrics | Assembly 5 Insufficient information Homooligomer；Protein × 3 PDB declaration: trimeric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.60 Å |
| 7EP6 Engineered Hepatitis B virus core antigen T=4 Deposited 2021-04-26 | Different structure-quality metrics | Assembly 1 Insufficient information Homooligomer；Protein × 240 PDB declaration: 240-meric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
Chain D
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.86 Å |
| 7EP6 Engineered Hepatitis B virus core antigen T=4 Deposited 2021-04-26 | Different structure-quality metrics | Assembly 2 Insufficient information Homooligomer；Protein × 4 PDB declaration: tetrameric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
Chain D
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.86 Å |
| 7EP6 Engineered Hepatitis B virus core antigen T=4 Deposited 2021-04-26 | Different structure-quality metrics | Assembly 3 Insufficient information Homooligomer；Protein × 20 PDB declaration: eicosameric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
Chain D
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.86 Å |
| 7EP6 Engineered Hepatitis B virus core antigen T=4 Deposited 2021-04-26 | Different structure-quality metrics | Assembly 4 Insufficient information Homooligomer；Protein × 24 PDB declaration: 24-meric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
Chain D
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.86 Å |
| 7EP6 Engineered Hepatitis B virus core antigen T=4 Deposited 2021-04-26 | Different structure-quality metrics | Assembly 5 Insufficient information Homooligomer；Protein × 4 PDB declaration: tetrameric |
Chain A
212–269（58 aa）
Chain B
212–269（58 aa）
Chain C
212–269（58 aa）
Chain D
212–269（58 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.86 Å |
| 7NHA 1918 H1N1 Viral influenza polymerase heterotrimer - Endonuclease and priming loop ordered (Class2a) Deposited 2021-02-10 | Different construct Different mutation/modification Different oligomeric state Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 3 PDB declaration: pentameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE；3.5 second blot and 3 microlitres sample.
|
Resolution 2.91 Å |
| 7NHC 1918 H1N1 Viral influenza polymerase heterotrimer - Endonuclease ordered (Class2b) Deposited 2021-02-10 | Different construct Different mutation/modification Different oligomeric state Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 3 PDB declaration: pentameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE；3.5 second blot and 3 microlitres sample.
|
Resolution 2.87 Å |
| 7NHX 1918 H1N1 Viral influenza polymerase heterotrimer - full transcriptase (Class1) Deposited 2021-02-11 | Different construct Different mutation/modification Different oligomeric state Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 3 PDB declaration: pentameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE；3.5 second blot and 3 microlitres sample.
|
Resolution 3.23 Å |
| 7NI0 1918 H1N1 Viral influenza polymerase heterotrimer - Replicase (class 3) Deposited 2021-02-11 | Different construct Different mutation/modification Different oligomeric state Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 3 PDB declaration: pentameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE；3.5 second blot and 3 microlitres sample.
|
Resolution 3.32 Å |
| 7NIK 1918 H1N1 Viral influenza polymerase heterotrimer with Nb8189 core Deposited 2021-02-12 | Different construct Different mutation/modification Different oligomeric state Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 4 PDB declaration: hexameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 6.20 Å |
| 7NIL 1918 H1N1 Viral influenza polymerase heterotrimer with Nb8190 core Deposited 2021-02-12 | Different construct Different mutation/modification Different oligomeric state Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 4 PDB declaration: hexameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 5.01 Å |
| 7NIR 1918 H1N1 Viral influenza polymerase heterotrimer with Nb8191 core Deposited 2021-02-13 | Different construct Different mutation/modification Different oligomeric state Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 4 PDB declaration: hexameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 6.70 Å |
| 7NIS 1918 H1N1 Viral influenza polymerase heterotrimer with Nb8192 core Deposited 2021-02-13 | Different construct Different mutation/modification Different oligomeric state Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 4 PDB declaration: hexameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 5.96 Å |
| 7NJ3 1918 H1N1 Viral influenza polymerase heterotrimer with Nb8196 core Deposited 2021-02-15 | Different construct Different mutation/modification Different oligomeric state Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 4 PDB declaration: hexameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.48 Å |
| 7NJ4 1918 H1N1 Viral influenza polymerase heterotrimer with Nb8198 core Deposited 2021-02-16 | Different construct Different mutation/modification Different oligomeric state Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 4 PDB declaration: hexameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 5.84 Å |
| 7NJ5 1918 H1N1 Viral influenza polymerase heterotrimer with Nb8199 core Deposited 2021-02-16 | Different construct Different mutation/modification Different oligomeric state Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 4 PDB declaration: hexameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.63 Å |
| 7NJ7 1918 H1N1 Viral influenza polymerase heterotrimer with Nb8200 core Deposited 2021-02-16 | Different construct Different mutation/modification Different oligomeric state Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 4 PDB declaration: hexameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.82 Å |
| 7NK1 1918 Influenza virus polymerase heterotirmer in complex with vRNA promoters and Nb8201 Deposited 2021-02-17 | Different construct Different mutation/modification Different oligomeric state Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 4 PDB declaration: hexameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.22 Å |
| 7NK2 1918 H1N1 Viral influenza polymerase heterotrimer with Nb8202 core Deposited 2021-02-17 | Different construct Different mutation/modification Different oligomeric state Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 4 PDB declaration: hexameric |
Chain C
158–271（114 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.84 Å |
| 8CPL YZw2 a scaffold for cryo-EM of small proteins of interest Deposited 2023-03-03 | Different construct Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Homooligomer；Protein × 4 PDB declaration: tetrameric |
Chain A
220–269（50 aa）
Chain B
220–269（50 aa）
Chain C
220–269（50 aa）
Chain D
220–269（50 aa）
|
Not recorded | PLP PYRIDOXAL-5'-PHOSPHATE × 4 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；16.6% w/v PEG3350, 0.2M NaF and 0.1M Bis-Tris Propane pH 5.5
|
Resolution 1.60 Å R-free 0.210 |
| 8DA3 Coevolved affibody-Z domain pair LL1.c1 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
213–269（57 aa）
|
Mutation：Q9L, F13I, L17F, G29A, I31F Non-standard monomer：Yes (specific site not provided by mmCIF) | SO4 SULFATE ION × 1 MLI MALONATE ION × 2 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 9；295 K；2.4 M Ammonium Sulfate
0.1 M bicine pH 9.0
Cryoprotected with sodium malonate
|
Resolution 1.06 Å R-free 0.168 |
| 8DA4 Coevolved affibody-Z domain pair LL1.c2 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
213–269（57 aa）
|
Mutation：Q9L, F13I, G29A, I31F Non-standard monomer：Yes (specific site not provided by mmCIF) | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 4.6；295 K；2.5 M AmmSO4, 0.1 M NaOAc pH 4.6
cryoprotected with Na malonate
|
Resolution 1.92 Å R-free 0.247 |
| 8DA4 Coevolved affibody-Z domain pair LL1.c2 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain C
213–269（57 aa）
|
Mutation：Q9L, F13I, G29A, I31F Non-standard monomer：Yes (specific site not provided by mmCIF) | SO4 SULFATE ION × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 4.6；295 K；2.5 M AmmSO4, 0.1 M NaOAc pH 4.6
cryoprotected with Na malonate
|
Resolution 1.92 Å R-free 0.247 |
| 8DA4 Coevolved affibody-Z domain pair LL1.c2 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 3 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain E
213–269（57 aa）
|
Mutation：Q9L, F13I, G29A, I31F Non-standard monomer：Yes (specific site not provided by mmCIF) | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 4.6；295 K；2.5 M AmmSO4, 0.1 M NaOAc pH 4.6
cryoprotected with Na malonate
|
Resolution 1.92 Å R-free 0.247 |
| 8DA5 Coevolved affibody-Z domain pair LL1.c4 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
212–269（58 aa）
|
Mutation：Q9F, F13I, G29A, I31F Non-standard monomer：Yes (specific site not provided by mmCIF) | GOL GLYCEROL × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8.5；295 K；2.3 M AmmPO4, 100 mM Tris pH 8.5
cryoprotected with 30% glycerol
|
Resolution 1.00 Å R-free 0.191 |
| 8DA5 Coevolved affibody-Z domain pair LL1.c4 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain C
212–269（58 aa）
|
Mutation：Q9F, F13I, G29A, I31F Non-standard monomer：Yes (specific site not provided by mmCIF) | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8.5；295 K；2.3 M AmmPO4, 100 mM Tris pH 8.5
cryoprotected with 30% glycerol
|
Resolution 1.00 Å R-free 0.191 |
| 8DA6 Coevolved affibody-Z domain pair LL1.c5 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
213–269（57 aa）
|
Mutation：Q9F, F13I, G29A, I31F Non-standard monomer：Yes (specific site not provided by mmCIF) | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 5；295 K；2.4 M ammonium Sulfate
0.1 M citric acid pH 5.0
cryoprotected with sodium malonate
|
Resolution 1.50 Å R-free 0.251 |
| 8DA6 Coevolved affibody-Z domain pair LL1.c5 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain C
213–269（57 aa）
|
Mutation：Q9F, F13I, G29A, I31F | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 5；295 K；2.4 M ammonium Sulfate
0.1 M citric acid pH 5.0
cryoprotected with sodium malonate
|
Resolution 1.50 Å R-free 0.251 |
| 8DA7 Coevolved affibody-Z domain pair LL1.c6 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
213–269（57 aa）
|
Mutation：Q9L, F13I, G29A, I31F Non-standard monomer：Yes (specific site not provided by mmCIF) | MLI MALONATE ION × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8.5；295 K；2.5 M AmmSO4, 100 mM tris pH 8.5
cryoprotected with Na malonate
|
Resolution 1.02 Å R-free 0.183 |
| 8DA8 Coevolved affibody-Z domain pair LL2.c1 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
213–269（57 aa）
|
Mutation：Q9L F13V, G29A, I31F | GOL GLYCEROL × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7；295 K；2.5 M ammonium sulfate
100 mM HEPES pH 7.0
Cryoprotected with 30% glycerol
|
Resolution 1.29 Å R-free 0.235 |
| 8DA9 Coevolved affibody-Z domain pair LL2.c3 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
213–269（57 aa）
|
Mutation：Q9L, F13V, G29A, I31F Non-standard monomer：Yes (specific site not provided by mmCIF) | GOL GLYCEROL × 1 SO4 SULFATE ION × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7；295 K；2.4 M Ammonium sulfate
0.1M HEPES pH 7.0
Cryoprotected with 30% glycerol
|
Resolution 1.35 Å R-free 0.198 |
| 8DA9 Coevolved affibody-Z domain pair LL2.c3 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain C
213–269（57 aa）
|
Mutation：Q9L, F13V, G29A, I31F Non-standard monomer：Yes (specific site not provided by mmCIF) | GOL GLYCEROL × 1 SO4 SULFATE ION × 2 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7；295 K；2.4 M Ammonium sulfate
0.1M HEPES pH 7.0
Cryoprotected with 30% glycerol
|
Resolution 1.35 Å R-free 0.198 |
| 8DAA Coevolved affibody-Z domain pair LL2.c7 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
213–269（57 aa）
|
Mutation：Q9L, F13V, G29A, I31F | MLI MALONATE ION × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7；295 K；3.0 M Ammonium sulfate,
100 mM HEPES pH 7.0
cryoprotected with sodium malonate
|
Resolution 1.75 Å R-free 0.298 |
| 8DAA Coevolved affibody-Z domain pair LL2.c7 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain C
213–269（57 aa）
|
Mutation：Q9L, F13V, G29A, I31F | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7；295 K；3.0 M Ammonium sulfate,
100 mM HEPES pH 7.0
cryoprotected with sodium malonate
|
Resolution 1.75 Å R-free 0.298 |
| 8DAB Coevolved affibody-Z domain pair LL2.c17 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
213–269（57 aa）
|
Mutation：Q9V, G29A, I31V Non-standard monomer：Yes (specific site not provided by mmCIF) | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8.2；295 K；2.3 M Amm2HPO4, 100 mM Tris pH 8.2
cryoprotected in 30% glycerol
|
Resolution 1.13 Å R-free 0.200 |
| 8DAC Coevolved affibody-Z domain pair LL2.c22 Deposited 2022-06-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric |
Chain A
213–269（57 aa）
|
Mutation：Q9I, F13V, L17F, G29A, I31F Non-standard monomer：Yes (specific site not provided by mmCIF) | GOL GLYCEROL × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8.2；295 K；2.5 M AmmSO4, 100 mM Tris pH 8.2
Cryoprotected with 30% glycerol
|
Resolution 1.19 Å R-free 0.196 |
| 8JXR Structure of nanobody-bound DRD1_LSD complex Deposited 2023-07-01 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 5 PDB declaration: pentameric |
Chain C
289–327（39 aa）
|
Mutation：E360Q,K363A,D364F,T367I,R368L | 7LD (8alpha)-N,N-diethyl-6-methyl-9,10-didehydroergoline-8-carboxamide × 1 |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.57 Å |
| 8JXS Structure of nanobody-bound DRD1_PF-6142 complex Deposited 2023-07-01 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 5 PDB declaration: pentameric |
Chain C
289–327（39 aa）
|
Mutation：E360Q,K363A,D364F,T367I,R368L,D404E,A405H | V6X 4-[3-methyl-4-(6-methylimidazo[1,2-a]pyrazin-5-yl)phenoxy]furo[3,2-c]pyridine × 1 |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.00 Å |
| 8R2P YZwIdeal x16 a scaffold for cryo-EM of small proteins of interest crystallizing in space group 19 (P 21 21 21) Deposited 2023-11-07 | Different construct Different mutation/modification Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Homooligomer；Protein × 4 PDB declaration: tetrameric |
Chain A
218–269（52 aa）
Chain B
218–269（52 aa）
Chain C
218–269（52 aa）
Chain D
218–269（52 aa）
|
Mutation：G487A Mutation：G487A Mutation：G487A Mutation：G487A | PLP PYRIDOXAL-5'-PHOSPHATE × 4 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6.5；277 K；50% w/v PEG200, 0.2M MgCl2 and 0.1M Sodium Cacodylate buffer pH 6.5
|
Resolution 2.22 Å R-free 0.230 |
| 9QU4 Cryo-EM structure of the inward-open choline-bound state of choline/ethanolamine transporter FLVCR2 Deposited 2025-04-10 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics | Assembly 1 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric |
Chain A
159–321（163 aa）
|
Not recorded | CHT CHOLINE ION × 1 |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.39 Å |
| 9W3K GPR151-Legobody complex Deposited 2025-07-29 | Different construct Different mutation/modification Different oligomeric state Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Heteromer；Protein × 5 PDB declaration: pentameric |
Chain C
289–327（39 aa）
|
Not recorded | No recorded non-water small molecule |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.08 Å |
66 other PDB entries and 123 assemblies. Open the comparison page and filter oligomeric states
View Construct and Data Evidence
| UniProt name | SPA_STAAU |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A； PDBConstruct 130–187； UniProt 212–269 Author chain A； PDBConstruct 190–247； UniProt 212–269 Author chain B； PDBConstruct 130–187； UniProt 212–269 Author chain B； PDBConstruct 190–247； UniProt 212–269 Author chain C； PDBConstruct 130–187； UniProt 212–269 Author chain C； PDBConstruct 190–247； UniProt 212–269 Author chain D； PDBConstruct 130–187； UniProt 212–269 Author chain D； PDBConstruct 190–247； UniProt 212–269 |
