5fmg

Structure and function based design of Plasmodium-selective proteasome inhibitors

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

PROTEASOME SUBUNIT ALPHA, PUTATIVE

OrganismNot specified

UniProt Q8IAR3

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 28 PROTEASOME SUBUNIT ALPHA TYPE 2, PUTATIVE × 2 (C6KST3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG2) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IBI3) PROTEOSOME SUBUNIT ALPHA TYPE 1, PUTATIVE × 2 (Q8IK90) PROTEASOME COMPONENT C8, PUTATIVE × 2 (O77396) PROTEASOME, PUTATIVE × 2 (Q8I0U7) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8I6T3) BETA3 PROTEASOME SUBUNIT, PUTATIVE × 2 (Q8I261) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IKC9) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IJT1) PROTEASOME SUBUNIT BETA TYPE × 2 (C0H4E8) PROTEASOME SUBUNIT BETA TYPE × 2 (Q7K6A9) ;(2S)-N-[(E,2S)-1-(1H-indol-3-yl)-4-methylsulfonyl-but-3-en-2-yl]-2-[[(2S)-3-(1H-indol-3-yl)-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]-4-methyl-pentanamide ; × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name Q8IAR3_PLAF7
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–260; UniProt 1–260 Author chain O; PDBConstruct 1–260; UniProt 1–260

PROTEASOME SUBUNIT ALPHA TYPE 2, PUTATIVE

OrganismNot specified

UniProt C6KST3

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 28 PROTEASOME SUBUNIT ALPHA, PUTATIVE × 2 (Q8IAR3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG2) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IBI3) PROTEOSOME SUBUNIT ALPHA TYPE 1, PUTATIVE × 2 (Q8IK90) PROTEASOME COMPONENT C8, PUTATIVE × 2 (O77396) PROTEASOME, PUTATIVE × 2 (Q8I0U7) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8I6T3) BETA3 PROTEASOME SUBUNIT, PUTATIVE × 2 (Q8I261) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IKC9) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IJT1) PROTEASOME SUBUNIT BETA TYPE × 2 (C0H4E8) PROTEASOME SUBUNIT BETA TYPE × 2 (Q7K6A9) ;(2S)-N-[(E,2S)-1-(1H-indol-3-yl)-4-methylsulfonyl-but-3-en-2-yl]-2-[[(2S)-3-(1H-indol-3-yl)-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]-4-methyl-pentanamide ; × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name C6KST3_PLAF7
Isoform —
PDB entities 2
Chains and sequence ranges Author chain B; PDBConstruct 1–235; UniProt 1–235 Author chain P; PDBConstruct 1–235; UniProt 1–235

PROTEASOME SUBUNIT ALPHA TYPE

OrganismNot specified

UniProt Q8IDG3

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 28 PROTEASOME SUBUNIT ALPHA, PUTATIVE × 2 (Q8IAR3) PROTEASOME SUBUNIT ALPHA TYPE 2, PUTATIVE × 2 (C6KST3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG2) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IBI3) PROTEOSOME SUBUNIT ALPHA TYPE 1, PUTATIVE × 2 (Q8IK90) PROTEASOME COMPONENT C8, PUTATIVE × 2 (O77396) PROTEASOME, PUTATIVE × 2 (Q8I0U7) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8I6T3) BETA3 PROTEASOME SUBUNIT, PUTATIVE × 2 (Q8I261) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IKC9) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IJT1) PROTEASOME SUBUNIT BETA TYPE × 2 (C0H4E8) PROTEASOME SUBUNIT BETA TYPE × 2 (Q7K6A9) ;(2S)-N-[(E,2S)-1-(1H-indol-3-yl)-4-methylsulfonyl-but-3-en-2-yl]-2-[[(2S)-3-(1H-indol-3-yl)-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]-4-methyl-pentanamide ; × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name Q8IDG3_PLAF7
Isoform —
PDB entities 3
Chains and sequence ranges Author chain C; PDBConstruct 1–246; UniProt 1–246 Author chain Q; PDBConstruct 1–246; UniProt 1–246

PROTEASOME SUBUNIT ALPHA TYPE

OrganismNot specified

UniProt Q8IDG2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 28 PROTEASOME SUBUNIT ALPHA, PUTATIVE × 2 (Q8IAR3) PROTEASOME SUBUNIT ALPHA TYPE 2, PUTATIVE × 2 (C6KST3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IBI3) PROTEOSOME SUBUNIT ALPHA TYPE 1, PUTATIVE × 2 (Q8IK90) PROTEASOME COMPONENT C8, PUTATIVE × 2 (O77396) PROTEASOME, PUTATIVE × 2 (Q8I0U7) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8I6T3) BETA3 PROTEASOME SUBUNIT, PUTATIVE × 2 (Q8I261) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IKC9) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IJT1) PROTEASOME SUBUNIT BETA TYPE × 2 (C0H4E8) PROTEASOME SUBUNIT BETA TYPE × 2 (Q7K6A9) ;(2S)-N-[(E,2S)-1-(1H-indol-3-yl)-4-methylsulfonyl-but-3-en-2-yl]-2-[[(2S)-3-(1H-indol-3-yl)-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]-4-methyl-pentanamide ; × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name Q8IDG2_PLAF7
Isoform —
PDB entities 4
Chains and sequence ranges Author chain D; PDBConstruct 1–241; UniProt 1–241 Author chain R; PDBConstruct 1–241; UniProt 1–241

PROTEASOME SUBUNIT ALPHA TYPE

OrganismNot specified

UniProt Q8IBI3

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 28 PROTEASOME SUBUNIT ALPHA, PUTATIVE × 2 (Q8IAR3) PROTEASOME SUBUNIT ALPHA TYPE 2, PUTATIVE × 2 (C6KST3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG2) PROTEOSOME SUBUNIT ALPHA TYPE 1, PUTATIVE × 2 (Q8IK90) PROTEASOME COMPONENT C8, PUTATIVE × 2 (O77396) PROTEASOME, PUTATIVE × 2 (Q8I0U7) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8I6T3) BETA3 PROTEASOME SUBUNIT, PUTATIVE × 2 (Q8I261) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IKC9) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IJT1) PROTEASOME SUBUNIT BETA TYPE × 2 (C0H4E8) PROTEASOME SUBUNIT BETA TYPE × 2 (Q7K6A9) ;(2S)-N-[(E,2S)-1-(1H-indol-3-yl)-4-methylsulfonyl-but-3-en-2-yl]-2-[[(2S)-3-(1H-indol-3-yl)-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]-4-methyl-pentanamide ; × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name Q8IBI3_PLAF7
Isoform —
PDB entities 5
Chains and sequence ranges Author chain E; PDBConstruct 1–256; UniProt 1–256 Author chain S; PDBConstruct 1–256; UniProt 1–256

PROTEOSOME SUBUNIT ALPHA TYPE 1, PUTATIVE

OrganismNot specified

UniProt Q8IK90

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 28 PROTEASOME SUBUNIT ALPHA, PUTATIVE × 2 (Q8IAR3) PROTEASOME SUBUNIT ALPHA TYPE 2, PUTATIVE × 2 (C6KST3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG2) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IBI3) PROTEASOME COMPONENT C8, PUTATIVE × 2 (O77396) PROTEASOME, PUTATIVE × 2 (Q8I0U7) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8I6T3) BETA3 PROTEASOME SUBUNIT, PUTATIVE × 2 (Q8I261) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IKC9) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IJT1) PROTEASOME SUBUNIT BETA TYPE × 2 (C0H4E8) PROTEASOME SUBUNIT BETA TYPE × 2 (Q7K6A9) ;(2S)-N-[(E,2S)-1-(1H-indol-3-yl)-4-methylsulfonyl-but-3-en-2-yl]-2-[[(2S)-3-(1H-indol-3-yl)-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]-4-methyl-pentanamide ; × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name Q8IK90_PLAF7
Isoform —
PDB entities 6
Chains and sequence ranges Author chain F; PDBConstruct 1–254; UniProt 1–254 Author chain T; PDBConstruct 1–254; UniProt 1–254

PROTEASOME COMPONENT C8, PUTATIVE

OrganismNot specified

UniProt O77396

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 28 PROTEASOME SUBUNIT ALPHA, PUTATIVE × 2 (Q8IAR3) PROTEASOME SUBUNIT ALPHA TYPE 2, PUTATIVE × 2 (C6KST3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG2) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IBI3) PROTEOSOME SUBUNIT ALPHA TYPE 1, PUTATIVE × 2 (Q8IK90) PROTEASOME, PUTATIVE × 2 (Q8I0U7) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8I6T3) BETA3 PROTEASOME SUBUNIT, PUTATIVE × 2 (Q8I261) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IKC9) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IJT1) PROTEASOME SUBUNIT BETA TYPE × 2 (C0H4E8) PROTEASOME SUBUNIT BETA TYPE × 2 (Q7K6A9) ;(2S)-N-[(E,2S)-1-(1H-indol-3-yl)-4-methylsulfonyl-but-3-en-2-yl]-2-[[(2S)-3-(1H-indol-3-yl)-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]-4-methyl-pentanamide ; × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name O77396_PLAF7
Isoform —
PDB entities 7
Chains and sequence ranges Author chain G; PDBConstruct 1–252; UniProt 1–252 Author chain U; PDBConstruct 1–252; UniProt 1–252

PROTEASOME, PUTATIVE

OrganismNot specified

UniProt Q8I0U7

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 28 PROTEASOME SUBUNIT ALPHA, PUTATIVE × 2 (Q8IAR3) PROTEASOME SUBUNIT ALPHA TYPE 2, PUTATIVE × 2 (C6KST3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG2) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IBI3) PROTEOSOME SUBUNIT ALPHA TYPE 1, PUTATIVE × 2 (Q8IK90) PROTEASOME COMPONENT C8, PUTATIVE × 2 (O77396) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8I6T3) BETA3 PROTEASOME SUBUNIT, PUTATIVE × 2 (Q8I261) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IKC9) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IJT1) PROTEASOME SUBUNIT BETA TYPE × 2 (C0H4E8) PROTEASOME SUBUNIT BETA TYPE × 2 (Q7K6A9) ;(2S)-N-[(E,2S)-1-(1H-indol-3-yl)-4-methylsulfonyl-but-3-en-2-yl]-2-[[(2S)-3-(1H-indol-3-yl)-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]-4-methyl-pentanamide ; × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name Q8I0U7_PLAF7
Isoform —
PDB entities 8
Chains and sequence ranges Author chain H; PDBConstruct 1–252; UniProt 31–282 Author chain V; PDBConstruct 1–252; UniProt 31–282

PROTEASOME SUBUNIT BETA TYPE

OrganismNot specified

UniProt Q8I6T3

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 28 PROTEASOME SUBUNIT ALPHA, PUTATIVE × 2 (Q8IAR3) PROTEASOME SUBUNIT ALPHA TYPE 2, PUTATIVE × 2 (C6KST3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG2) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IBI3) PROTEOSOME SUBUNIT ALPHA TYPE 1, PUTATIVE × 2 (Q8IK90) PROTEASOME COMPONENT C8, PUTATIVE × 2 (O77396) PROTEASOME, PUTATIVE × 2 (Q8I0U7) BETA3 PROTEASOME SUBUNIT, PUTATIVE × 2 (Q8I261) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IKC9) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IJT1) PROTEASOME SUBUNIT BETA TYPE × 2 (C0H4E8) PROTEASOME SUBUNIT BETA TYPE × 2 (Q7K6A9) ;(2S)-N-[(E,2S)-1-(1H-indol-3-yl)-4-methylsulfonyl-but-3-en-2-yl]-2-[[(2S)-3-(1H-indol-3-yl)-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]-4-methyl-pentanamide ; × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name Q8I6T3_PLAF7
Isoform —
PDB entities 9
Chains and sequence ranges Author chain I; PDBConstruct 1–229; UniProt 42–270 Author chain W; PDBConstruct 1–229; UniProt 42–270

BETA3 PROTEASOME SUBUNIT, PUTATIVE

OrganismNot specified

UniProt Q8I261

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 28 PROTEASOME SUBUNIT ALPHA, PUTATIVE × 2 (Q8IAR3) PROTEASOME SUBUNIT ALPHA TYPE 2, PUTATIVE × 2 (C6KST3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG2) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IBI3) PROTEOSOME SUBUNIT ALPHA TYPE 1, PUTATIVE × 2 (Q8IK90) PROTEASOME COMPONENT C8, PUTATIVE × 2 (O77396) PROTEASOME, PUTATIVE × 2 (Q8I0U7) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8I6T3) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IKC9) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IJT1) PROTEASOME SUBUNIT BETA TYPE × 2 (C0H4E8) PROTEASOME SUBUNIT BETA TYPE × 2 (Q7K6A9) ;(2S)-N-[(E,2S)-1-(1H-indol-3-yl)-4-methylsulfonyl-but-3-en-2-yl]-2-[[(2S)-3-(1H-indol-3-yl)-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]-4-methyl-pentanamide ; × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name Q8I261_PLAF7
Isoform —
PDB entities 10
Chains and sequence ranges Author chain J; PDBConstruct 15–218; UniProt 1–204 Author chain X; PDBConstruct 15–218; UniProt 1–204

PROTEASOME SUBUNIT BETA TYPE

OrganismNot specified

UniProt Q8IKC9

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 28 PROTEASOME SUBUNIT ALPHA, PUTATIVE × 2 (Q8IAR3) PROTEASOME SUBUNIT ALPHA TYPE 2, PUTATIVE × 2 (C6KST3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG2) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IBI3) PROTEOSOME SUBUNIT ALPHA TYPE 1, PUTATIVE × 2 (Q8IK90) PROTEASOME COMPONENT C8, PUTATIVE × 2 (O77396) PROTEASOME, PUTATIVE × 2 (Q8I0U7) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8I6T3) BETA3 PROTEASOME SUBUNIT, PUTATIVE × 2 (Q8I261) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IJT1) PROTEASOME SUBUNIT BETA TYPE × 2 (C0H4E8) PROTEASOME SUBUNIT BETA TYPE × 2 (Q7K6A9) ;(2S)-N-[(E,2S)-1-(1H-indol-3-yl)-4-methylsulfonyl-but-3-en-2-yl]-2-[[(2S)-3-(1H-indol-3-yl)-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]-4-methyl-pentanamide ; × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name Q8IKC9_PLAF7
Isoform —
PDB entities 11
Chains and sequence ranges Author chain K; PDBConstruct 1–195; UniProt 1–195 Author chain Y; PDBConstruct 1–195; UniProt 1–195

PROTEASOME SUBUNIT BETA TYPE

OrganismNot specified

UniProt Q8IJT1

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 28 PROTEASOME SUBUNIT ALPHA, PUTATIVE × 2 (Q8IAR3) PROTEASOME SUBUNIT ALPHA TYPE 2, PUTATIVE × 2 (C6KST3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG2) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IBI3) PROTEOSOME SUBUNIT ALPHA TYPE 1, PUTATIVE × 2 (Q8IK90) PROTEASOME COMPONENT C8, PUTATIVE × 2 (O77396) PROTEASOME, PUTATIVE × 2 (Q8I0U7) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8I6T3) BETA3 PROTEASOME SUBUNIT, PUTATIVE × 2 (Q8I261) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IKC9) PROTEASOME SUBUNIT BETA TYPE × 2 (C0H4E8) PROTEASOME SUBUNIT BETA TYPE × 2 (Q7K6A9) ;(2S)-N-[(E,2S)-1-(1H-indol-3-yl)-4-methylsulfonyl-but-3-en-2-yl]-2-[[(2S)-3-(1H-indol-3-yl)-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]-4-methyl-pentanamide ; × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name Q8IJT1_PLAF7
Isoform —
PDB entities 12
Chains and sequence ranges Author chain L; PDBConstruct 1–211; UniProt 61–271 Author chain Z; PDBConstruct 1–211; UniProt 61–271

PROTEASOME SUBUNIT BETA TYPE

OrganismNot specified

UniProt C0H4E8

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 28 PROTEASOME SUBUNIT ALPHA, PUTATIVE × 2 (Q8IAR3) PROTEASOME SUBUNIT ALPHA TYPE 2, PUTATIVE × 2 (C6KST3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG2) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IBI3) PROTEOSOME SUBUNIT ALPHA TYPE 1, PUTATIVE × 2 (Q8IK90) PROTEASOME COMPONENT C8, PUTATIVE × 2 (O77396) PROTEASOME, PUTATIVE × 2 (Q8I0U7) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8I6T3) BETA3 PROTEASOME SUBUNIT, PUTATIVE × 2 (Q8I261) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IKC9) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IJT1) PROTEASOME SUBUNIT BETA TYPE × 2 (Q7K6A9) ;(2S)-N-[(E,2S)-1-(1H-indol-3-yl)-4-methylsulfonyl-but-3-en-2-yl]-2-[[(2S)-3-(1H-indol-3-yl)-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]-4-methyl-pentanamide ; × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name C0H4E8_PLAF7
Isoform —
PDB entities 13
Chains and sequence ranges Author chain M; PDBConstruct 1–240; UniProt 1–240 Author chain a; PDBConstruct 1–240; UniProt 1–240

PROTEASOME SUBUNIT BETA TYPE

OrganismNot specified

UniProt Q7K6A9

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 28 PROTEASOME SUBUNIT ALPHA, PUTATIVE × 2 (Q8IAR3) PROTEASOME SUBUNIT ALPHA TYPE 2, PUTATIVE × 2 (C6KST3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG3) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IDG2) PROTEASOME SUBUNIT ALPHA TYPE × 2 (Q8IBI3) PROTEOSOME SUBUNIT ALPHA TYPE 1, PUTATIVE × 2 (Q8IK90) PROTEASOME COMPONENT C8, PUTATIVE × 2 (O77396) PROTEASOME, PUTATIVE × 2 (Q8I0U7) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8I6T3) BETA3 PROTEASOME SUBUNIT, PUTATIVE × 2 (Q8I261) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IKC9) PROTEASOME SUBUNIT BETA TYPE × 2 (Q8IJT1) PROTEASOME SUBUNIT BETA TYPE × 2 (C0H4E8) ;(2S)-N-[(E,2S)-1-(1H-indol-3-yl)-4-methylsulfonyl-but-3-en-2-yl]-2-[[(2S)-3-(1H-indol-3-yl)-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]-4-methyl-pentanamide ; × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name Q7K6A9_PLAF7
Isoform —
PDB entities 14
Chains and sequence ranges Author chain N; PDBConstruct 1–265; UniProt 1–265 Author chain b; PDBConstruct 1–265; UniProt 1–265

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id5fmg
Deposition date deposition_date2015-11-04
Structure title titleStructure and function based design of Plasmodium-selective proteasome inhibitors
Keywords keywordsHYDROLASE, PROTEASOME, 20S, PLASMODIUM, MALARIA, INHIBITOR, DRUG DESIGN, CRYO-EM; HYDROLASE
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

5fmg__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

5fmg__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

5fmg__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)58.96 Å
Rg (electron density)58.60 Å
Total Rg58.67 Å
Atom count39334
Residues5716
Excluded volume697090 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 5fmg__assembly_1__model_1 28-meric (28) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (15)

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6. Fold Classification (SCOP + CATH) 28 domains

CATH v4.4 (28 domains)

Domain ID domain_id5fmgA00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgB00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgC00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgD00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgE00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgF00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgG00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgH00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgI00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgJ00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgK00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgL00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgM00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgN00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgO00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgP00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgQ00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgR00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgS00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgT00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgU00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgV00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgW00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgX00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgY00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgZ00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmga00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id5fmgb00
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
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7. Citations (1)