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6C95
The Human NatA (Naa10/Naa15) amino-terminal acetyltransferase complex bound to HYPK
Deposited 2018-01-25
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Different oligomeric state
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–235(235 aa)
|
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
IHP INOSITOL HEXAKISPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;19.5% PEG3350, 11% Tascimate, pH 6.5
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Resolution 3.15 Å
R-free 0.255
|
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6PPL
Cryo-EM structure of human NatE complex (NatA/Naa50)
Deposited 2019-07-08
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Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain C
1–235(235 aa)
|
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
ACO ACETYL COENZYME *A × 2
IHP INOSITOL HEXAKISPHOSPHATE × 1
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ELECTRON MICROSCOPY
cryo-EM buffer
pH 7
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.02 Å
|
|
6PW9
Cryo-EM structure of human NatE/HYPK complex
Deposited 2019-07-22
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Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 4
PDB declaration: tetrameric
|
Chain C
1–235(235 aa)
|
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
IHP INOSITOL HEXAKISPHOSPHATE × 1
ACO ACETYL COENZYME *A × 1
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ELECTRON MICROSCOPY
cryo-EM buffer
pH 7
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.03 Å
|
|
9F1B
Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
Deposited 2024-04-18
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Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 83
PDB declaration: 89-meric
|
Chain DC
1–235(235 aa)
|
Mutation:E24Q, Y26F
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MG MAGNESIUM ION × 420
ZN ZINC ION × 8
UNX UNKNOWN LIGAND × 306
IHP INOSITOL HEXAKISPHOSPHATE × 1
SPD SPERMIDINE × 30
SPM SPERMINE × 3
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
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ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE-PROPANE
|
Resolution 3.01 Å
|
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9F1C
Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E
Deposited 2024-04-18
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Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Insufficient information
Heteromer;Protein × 84
PDB declaration: 90-meric
|
Chain DC
1–235(235 aa)
|
Mutation:E24Q, Y26F
|
UNX UNKNOWN LIGAND × 277
MG MAGNESIUM ION × 420
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
SPD SPERMIDINE × 30
SPM SPERMINE × 3
ZN ZINC ION × 8
IHP INOSITOL HEXAKISPHOSPHATE × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE-PROPANE
|
Resolution 3.78 Å
|
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9F1D
Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK
Deposited 2024-04-18
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Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein–RNA
Heteromer;Protein × 85
PDB declaration: 91-meric
|
Chain DC
1–235(235 aa)
|
Mutation:E24Q, Y26F
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UNX UNKNOWN LIGAND × 295
SPD SPERMIDINE × 30
MG MAGNESIUM ION × 420
SPM SPERMINE × 3
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
IHP INOSITOL HEXAKISPHOSPHATE × 1
ZN ZINC ION × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE-PROPANE
|
Resolution 3.26 Å
|
|
9FPZ
Human NatA-MAP2 80S ribosome complex
Deposited 2024-06-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein–RNA
Heteromer;Protein × 11
PDB declaration: 13-meric
|
Chain 2
2–170(169 aa)
|
Not recorded
|
CO COBALT (II) ION × 2
IHP INOSITOL HEXAKISPHOSPHATE × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.69 Å
|
|
9FQ0
Human NatA-NAC-MAP1 80S ribosome complex
Deposited 2024-06-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein–RNA
Heteromer;Protein × 14
PDB declaration: hexadecameric
|
Chain 2
2–170(169 aa)
|
Not recorded
|
IHP INOSITOL HEXAKISPHOSPHATE × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.67 Å
|
|
9GJ5
Human 80S ribosome in complex with NatA in distal position and Ebp1
Deposited 2024-08-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein–RNA
Heteromer;Protein × 11
PDB declaration: 13-meric
|
Chain 2
2–170(169 aa)
|
Not recorded
|
KGN D-chiro inositol hexakisphosphate × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.61 Å
|
|
9GJ6
Human 80S ribosome in complex with NatA in proximal and distal position
Deposited 2024-08-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein–RNA
Heteromer;Protein × 15
PDB declaration: 17-meric
|
Chain A
1–235(235 aa)
Chain C
1–235(235 aa)
|
Not recorded
|
IHP INOSITOL HEXAKISPHOSPHATE × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.91 Å
|
|
9QQB
Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
Deposited 2025-03-31
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Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein–RNA
Heteromer;Protein × 84
PDB declaration: 89-meric
|
Chain XB
1–235(235 aa)
|
Not recorded
|
SPD SPERMIDINE × 30
SPM SPERMINE × 3
MG MAGNESIUM ION × 412
UNX UNKNOWN LIGAND × 168
ZN ZINC ION × 8
IHP INOSITOL HEXAKISPHOSPHATE × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.6
cryo-EM vitrification conditions
Cryogen ETHANE-PROPANE
|
Resolution 3.43 Å
|