← Back to search
8oo0

Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome

Method: ELECTRON MICROSCOPY Dmax: 246.8 Å Quality: EXCELLENT
▼

1. Protein Identity and Related Structures Protein Identity & Related Structures

Putative guanine nucleotide-binding protein

OrganismNot specified

UniProt G0S9U0

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain A； UniProt 1–316 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain A 1–316（316 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain A 1–316（316 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain A 1–316（316 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain A 1–316（316 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

4 other PDB entries and 4 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S9U0_CHATD
Isoform —
PDB entities 5
Chains and sequence ranges Author chain A； PDBConstruct 1–316； UniProt 1–316

Hyaluronan/mRNA-binding protein domain-containing protein

OrganismNot specified

UniProt G0S428

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain B； UniProt 1–302 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain B 1–302（302 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain B 1–302（302 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain B 1–302（302 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain B 1–302（302 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

4 other PDB entries and 4 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S428_CHATD
Isoform —
PDB entities 6
Chains and sequence ranges Author chain B； PDBConstruct 1–302； UniProt 1–302

Ribosome-associated molecular chaperone SSB1

OrganismNot specified

UniProt G0SCU5

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain C； UniProt 1–614 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
5TKY Crystal structure of the co-translational Hsp70 chaperone Ssb in the ATP-bound, open conformation Deposited 2016-10-10 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain A 4–624（621 aa）
Chain B 4–624（621 aa）
Not recorded ATP ADENOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；291 K；20% PEG3350, 0.2 M ammonium phosphate
Resolution 2.60 Å R-free 0.264
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain C 1–614（614 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å

2 other PDB entries and 2 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name SSB1_CHATD
Isoform —
PDB entities 7
Chains and sequence ranges Author chain C； PDBConstruct 1–614； UniProt 1–614

60S ribosomal protein L2-like protein

OrganismNot specified

UniProt G0S4P8

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LA； UniProt 1–254 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LA 1–254（254 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LA 1–254（254 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LA 1–254（254 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LA 1–254（254 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain LA 1–254（254 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LA 1–254（254 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain LA 1–254（254 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LA 1–254（254 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain LA 1–254（254 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain LA 1–254（254 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain LA 1–254（254 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LA 1–254（254 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain LA 1–254（254 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain LA 1–254（254 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain LA 1–254（254 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LA 1–254（254 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LA 1–254（254 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

17 other PDB entries and 17 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S4P8_CHATD
Isoform —
PDB entities 8
Chains and sequence ranges Author chain LA； PDBConstruct 1–254； UniProt 1–254

60S ribosomal protein L3-like protein

OrganismNot specified

UniProt G0RXW1

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LB； UniProt 1–388 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LB 1–392（392 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LB 1–392（392 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LB 1–392（392 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LB 1–392（392 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9R Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 46 PDB declaration: 49-meric
Chain LB 1–392（392 aa）
Not recorded ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9T Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 55-meric
Chain LB 1–392（392 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain LB 1–392（392 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain LB 1–392（392 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LB 1–392（392 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain LB 1–392（392 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LB 1–392（392 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain LB 1–392（392 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LB 1–392（392 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain LB 1–392（392 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LB 1–392（392 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain LB 1–392（392 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain LB 1–392（392 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain LB 1–392（392 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LB 1–392（392 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain LB 1–392（392 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain LB 1–392（392 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain LB 1–392（392 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LB 1–392（392 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LB 1–392（392 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

24 other PDB entries and 24 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0RXW1_CHATD
Isoform —
PDB entities 9
Chains and sequence ranges Author chain LB； PDBConstruct 1–388； UniProt 1–388

60S ribosomal protein L4-like protein

OrganismNot specified

UniProt G0SFC3

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LC； UniProt 1–365 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
5TQB Crystal structure of assembly chaperone of ribosomal protein L4 (Acl4) in complex with ribosomal protein L4 (RpL4) Deposited 2016-10-23 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain A 1–277（277 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) EDO 1,2-ETHANEDIOL × 8 PEG DI(HYDROXYETHYL)ETHER × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 5.5；294 K；0.1 M BIS-TRIS (pH 5.5) 2 % (v/v) Tacsminate (pH 5.5) 13 % (w/v) PEG 3350
Resolution 2.40 Å R-free 0.225
5TQC Crystal structure of transport factor karyopherin-beta 2 in complex with the PY-NLS of ribosomal protein L4 (RpL4) Deposited 2016-10-23 Different construct Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain B 308–332（25 aa）
Not recorded No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；294 K；0.5 M Sodium citrate tribasic 0.1 M BIS-TRIS-propane pH 7.0
Resolution 3.00 Å R-free 0.238
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LC 1–365（365 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LC 1–365（365 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LC 1–365（365 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LC 1–365（365 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9P Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Mak16 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 31 PDB declaration: 33-meric
Chain LC 1–365（365 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8I9R Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 46 PDB declaration: 49-meric
Chain LC 1–365（365 aa）
Not recorded ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9T Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 55-meric
Chain LC 1–365（365 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain LC 1–365（365 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain LC 1–365（365 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LC 1–365（365 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain LC 1–365（365 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LC 1–365（365 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain LC 1–365（365 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LC 1–365（365 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain LC 1–365（365 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LC 1–365（365 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain LC 1–365（365 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain LC 1–365（365 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain LC 1–365（365 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LC 1–365（365 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain LC 1–365（365 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain LC 1–365（365 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain LC 1–365（365 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LC 1–365（365 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LC 1–365（365 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

27 other PDB entries and 27 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SFC3_CHATD
Isoform —
PDB entities 10
Chains and sequence ranges Author chain LC； PDBConstruct 1–365； UniProt 1–365

60S ribosomal protein l5-like protein

OrganismNot specified

UniProt G0SEG2

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LD； UniProt 1–304 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
4GMN Structural basis of Rpl5 recognition by Syo1 Deposited 2012-08-16 Different construct Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain B 1–45（45 aa）
Not recorded No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 7；291 K；0.1 M succinic acid pH 7.0, 20% (v/v) PEG 3350, VAPOR DIFFUSION, SITTING DROP, temperature 291K
Resolution 2.95 Å R-free 0.259
5AFF Symportin 1 chaperones 5S RNP assembly during ribosome biogenesis by occupying an essential rRNA binding site Deposited 2015-01-21 Different construct Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 3 PDB declaration: trimeric
Chain B 1–41（41 aa） Fragment：N-TERMINUS LINEAR MOTIF, UNP RESIDUES 1-41
Not recorded No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions 0.1 M SODIUM ACETATE, 8% (V/V) PEG 4000
Resolution 3.40 Å R-free 0.300
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LD 1–304（304 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LD 1–304（304 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7OZS Structure of the hexameric 5S RNP from C. thermophilum Deposited 2021-06-28 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 6 PDB declaration: heptameric
Chain A 1–304（304 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LD 1–304（304 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LD 1–304（304 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9R Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 46 PDB declaration: 49-meric
Chain LD 1–304（304 aa）
Not recorded ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LD 1–304（304 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain LD 1–304（304 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LD 1–304（304 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain LD 1–304（304 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain LD 1–304（304 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain LD 1–304（304 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LD 1–304（304 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain LD 1–304（304 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain LD 1–304（304 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain LD 1–304（304 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LD 1–304（304 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LD 1–304（304 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

20 other PDB entries and 20 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SEG2_CHATD
Isoform —
PDB entities 11
Chains and sequence ranges Author chain LD； PDBConstruct 1–304； UniProt 1–304

60S ribosomal protein L6

OrganismNot specified

UniProt G0S0D6

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LE； UniProt 1–200 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LE 1–200（200 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LE 1–200（200 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LE 1–200（200 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LE 1–200（200 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9P Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Mak16 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 31 PDB declaration: 33-meric
Chain LE 1–200（200 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8I9R Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 46 PDB declaration: 49-meric
Chain LE 1–200（200 aa）
Not recorded ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9T Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 55-meric
Chain LE 1–200（200 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain LE 1–200（200 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain LE 1–200（200 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LE 1–200（200 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain LE 1–200（200 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LE 1–200（200 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain LE 1–200（200 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LE 1–200（200 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain LE 1–200（200 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LE 1–200（200 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain LE 1–200（200 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain LE 1–200（200 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain LE 1–200（200 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LE 1–200（200 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain LE 1–200（200 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain LE 1–200（200 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain LE 1–200（200 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LE 1–200（200 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LE 1–200（200 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

25 other PDB entries and 25 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S0D6_CHATD
Isoform —
PDB entities 12
Chains and sequence ranges Author chain LE； PDBConstruct 1–200； UniProt 1–200

60S ribosomal protein l7-like protein

OrganismNot specified

UniProt G0SFL0

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LF； UniProt 1–249 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LF 1–249（249 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LF 1–249（249 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LF 1–249（249 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LF 1–249（249 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9P Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Mak16 Deposited 2023-02-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 31 PDB declaration: 33-meric
Chain CM 1–249（249 aa）
Chain LF 1–249（249 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8I9R Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP Deposited 2023-02-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 46 PDB declaration: 49-meric
Chain CM 1–249（249 aa）
Chain LF 1–249（249 aa）
Not recorded ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9T Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1 Deposited 2023-02-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 55-meric
Chain CM 1–249（249 aa）
Chain LF 1–249（249 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain CM 1–249（249 aa）
Chain LF 1–249（249 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain CM 1–249（249 aa）
Chain LF 1–249（249 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain CM 1–249（249 aa）
Chain LF 1–249（249 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain CM 1–249（249 aa）
Chain LF 1–249（249 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain CM 1–249（249 aa）
Chain LF 1–249（249 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain CM 1–249（249 aa）
Chain LF 1–249（249 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain CM 1–249（249 aa）
Chain LF 1–249（249 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain CM 1–249（249 aa）
Chain LF 1–249（249 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain CM 1–249（249 aa）
Chain LF 1–249（249 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain CM 1–249（249 aa）
Chain LF 1–249（249 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain LF 1–249（249 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain CM 1–249（249 aa）
Chain LF 1–249（249 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain CM 1–249（249 aa）
Chain LF 1–249（249 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain LF 1–249（249 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain CM 1–249（249 aa）
Chain LF 1–249（249 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain CM 1–249（249 aa）
Chain LF 1–249（249 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LF 1–249（249 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LF 1–249（249 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

25 other PDB entries and 25 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SFL0_CHATD
Isoform —
PDB entities 13
Chains and sequence ranges Author chain LF； PDBConstruct 1–249； UniProt 1–249

60S ribosomal protein L8

OrganismNot specified

UniProt G0SAJ9

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LG； UniProt 1–262 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LG 1–262（262 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LG 1–262（262 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LG 1–262（262 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LG 1–262（262 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9P Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Mak16 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 31 PDB declaration: 33-meric
Chain LG 1–262（262 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8I9R Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 46 PDB declaration: 49-meric
Chain LG 1–262（262 aa）
Not recorded ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9T Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 55-meric
Chain LG 1–262（262 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain LG 1–262（262 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain LG 1–262（262 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LG 1–262（262 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain LG 1–262（262 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LG 1–262（262 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain LG 1–262（262 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LG 1–262（262 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain LG 1–262（262 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LG 1–262（262 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain LG 1–262（262 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain LG 1–262（262 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain LG 1–262（262 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LG 1–262（262 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain LG 1–262（262 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain LG 1–262（262 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain LG 1–262（262 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LG 1–262（262 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LG 1–262（262 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

25 other PDB entries and 25 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SAJ9_CHATD
Isoform —
PDB entities 14
Chains and sequence ranges Author chain LG； PDBConstruct 1–262； UniProt 1–262

60S ribosomal protein l9-like protein

OrganismNot specified

UniProt G0S0E5

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LH； UniProt 1–15 Chain LH； UniProt 53–229 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LH 1–229（229 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LH 1–229（229 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8I9T Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1 Deposited 2023-02-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 55-meric
Chain LH 1–229（229 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain LH 1–229（229 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain LH 1–229（229 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LH 1–229（229 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain LH 1–229（229 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LH 1–229（229 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain LH 1–229（229 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LH 1–229（229 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LH 1–229（229 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

11 other PDB entries and 11 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S0E5_CHATD
Isoform —
PDB entities 15
Chains and sequence ranges Author chain LH； PDBConstruct 1–15； UniProt 1–15 Author chain LH； PDBConstruct 16–192； UniProt 53–229

60S ribosomal protein L10-like protein

OrganismNot specified

UniProt G0SEI1

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LI； UniProt 1–219 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
4ZOZ Crystal structure of the Chaetomium thermophilum Sqt1 bound to the N-terminus of the ribosomal protein L10 Deposited 2015-05-07 Different construct Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain Y 1–20（20 aa）
Not recorded No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；291 K；0.2 M sodium chloride, 0.1 M Na/K-phosphate pH 6.2, 40% PEG400
Resolution 1.70 Å R-free 0.216
4ZOZ Crystal structure of the Chaetomium thermophilum Sqt1 bound to the N-terminus of the ribosomal protein L10 Deposited 2015-05-07 Different construct Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain C 1–20（20 aa）
Not recorded No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；291 K；0.2 M sodium chloride, 0.1 M Na/K-phosphate pH 6.2, 40% PEG400
Resolution 1.70 Å R-free 0.216
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LI 1–219（219 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LI 1–219（219 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LI 1–219（219 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LI 1–219（219 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LI 1–219（219 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LI 1–219（219 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

7 other PDB entries and 8 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SEI1_CHATD
Isoform —
PDB entities 16
Chains and sequence ranges Author chain LI； PDBConstruct 1–219； UniProt 1–219

Putative ribosomal protein

OrganismNot specified

UniProt G0SHQ2

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LJ； UniProt 1–173 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
5AFF Symportin 1 chaperones 5S RNP assembly during ribosome biogenesis by occupying an essential rRNA binding site Deposited 2015-01-21 Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 3 PDB declaration: trimeric
Chain C 1–173（173 aa）
Not recorded No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions 0.1 M SODIUM ACETATE, 8% (V/V) PEG 4000
Resolution 3.40 Å R-free 0.300
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LJ 1–173（173 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LJ 1–173（173 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7OZS Structure of the hexameric 5S RNP from C. thermophilum Deposited 2021-06-28 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 6 PDB declaration: heptameric
Chain B 1–173（173 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LJ 1–173（173 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LJ 1–173（173 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9R Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 46 PDB declaration: 49-meric
Chain LJ 1–173（173 aa）
Not recorded ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LJ 1–173（173 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain LJ 1–173（173 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LJ 1–173（173 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain LJ 1–173（173 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain LJ 1–173（173 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain LJ 1–173（173 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LJ 1–173（173 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain LJ 1–173（173 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain LJ 1–173（173 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain LJ 1–173（173 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LJ 1–173（173 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LJ 1–173（173 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

19 other PDB entries and 19 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SHQ2_CHATD
Isoform —
PDB entities 17
Chains and sequence ranges Author chain LJ； PDBConstruct 1–173； UniProt 1–173

60S ribosomal protein L12-like protein

OrganismNot specified

UniProt G0SGH8

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LK； UniProt 1–165 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LK 1–165（165 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LK 1–165（165 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LK 1–165（165 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LK 1–165（165 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9T Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 55-meric
Chain LK 1–165（165 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain LK 1–165（165 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain LK 1–165（165 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LK 1–165（165 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain LK 1–165（165 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LK 1–165（165 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain LK 1–165（165 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LK 1–165（165 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain LK 1–165（165 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LK 1–165（165 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain LK 1–165（165 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain LK 1–165（165 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain LK 1–165（165 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LK 1–165（165 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain LK 1–165（165 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain LK 1–165（165 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain LK 1–165（165 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LK 1–165（165 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å

22 other PDB entries and 22 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SGH8_CHATD
Isoform —
PDB entities 18
Chains and sequence ranges Author chain LK； PDBConstruct 1–165； UniProt 1–165

60S ribosomal protein L13

OrganismNot specified

UniProt G0S992

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LL； UniProt 1–213 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LL 1–213（213 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LL 1–213（213 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LL 1–213（213 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LL 1–213（213 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9P Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Mak16 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 31 PDB declaration: 33-meric
Chain LL 1–213（213 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8I9R Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 46 PDB declaration: 49-meric
Chain LL 1–213（213 aa）
Not recorded ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9T Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 55-meric
Chain LL 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain LL 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain LL 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LL 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain LL 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LL 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain LL 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LL 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain LL 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LL 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain LL 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain LL 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain LL 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LL 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain LL 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain LL 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain LL 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LL 1–213（213 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LL 1–213（213 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

25 other PDB entries and 25 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S992_CHATD
Isoform —
PDB entities 19
Chains and sequence ranges Author chain LL； PDBConstruct 1–213； UniProt 1–213

60S ribosomal protein L14-like protein

OrganismNot specified

UniProt G0S1R0

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LM； UniProt 1–142 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LM 1–142（142 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LM 1–142（142 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LM 1–142（142 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LM 1–142（142 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9P Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Mak16 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 31 PDB declaration: 33-meric
Chain LM 1–142（142 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8I9R Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 46 PDB declaration: 49-meric
Chain LM 1–142（142 aa）
Not recorded ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9T Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 55-meric
Chain LM 1–142（142 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain LM 1–142（142 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain LM 1–142（142 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LM 1–142（142 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain LM 1–142（142 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LM 1–142（142 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain LM 1–142（142 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LM 1–142（142 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain LM 1–142（142 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LM 1–142（142 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain LM 1–142（142 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain LM 1–142（142 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain LM 1–142（142 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LM 1–142（142 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain LM 1–142（142 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain LM 1–142（142 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain LM 1–142（142 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LM 1–142（142 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LM 1–142（142 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

25 other PDB entries and 25 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S1R0_CHATD
Isoform —
PDB entities 20
Chains and sequence ranges Author chain LM； PDBConstruct 1–142； UniProt 1–142

Ribosomal protein L15

OrganismNot specified

UniProt G0RZ88

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LN； UniProt 1–203 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LN 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LN 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LN 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LN 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9P Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Mak16 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 31 PDB declaration: 33-meric
Chain LN 1–203（203 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8I9R Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 46 PDB declaration: 49-meric
Chain LN 1–203（203 aa）
Not recorded ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9T Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 55-meric
Chain LN 1–203（203 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain LN 1–203（203 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain LN 1–203（203 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LN 1–203（203 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain LN 1–203（203 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LN 1–203（203 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain LN 1–203（203 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LN 1–203（203 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain LN 1–203（203 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LN 1–203（203 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain LN 1–203（203 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain LN 1–203（203 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain LN 1–203（203 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LN 1–203（203 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain LN 1–203（203 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain LN 1–203（203 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain LN 1–203（203 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LN 1–203（203 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LN 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

25 other PDB entries and 25 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0RZ88_CHATD
Isoform —
PDB entities 21
Chains and sequence ranges Author chain LN； PDBConstruct 1–203； UniProt 1–203

60S ribosomal protein L16-like protein

OrganismNot specified

UniProt G0SH61

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LO； UniProt 1–204 Non-standard monomer：Yes (specific site not provided by mmCIF) 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LO 1–204（204 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LO 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LO 1–204（204 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LO 1–204（204 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9P Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Mak16 Deposited 2023-02-07 Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 31 PDB declaration: 33-meric
Chain LO 1–204（204 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8I9R Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP Deposited 2023-02-07 Different mutation/modification Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 46 PDB declaration: 49-meric
Chain LO 1–204（204 aa）
Not recorded ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9T Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1 Deposited 2023-02-07 Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 55-meric
Chain LO 1–204（204 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different mutation/modification Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain LO 1–204（204 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different mutation/modification Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain LO 1–204（204 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LO 1–204（204 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different mutation/modification Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain LO 1–204（204 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LO 1–204（204 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain LO 1–204（204 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LO 1–204（204 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain LO 1–204（204 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LO 1–204（204 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain LO 1–204（204 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain LO 1–204（204 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain LO 1–204（204 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LO 1–204（204 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain LO 1–204（204 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain LO 1–204（204 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain LO 1–204（204 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LO 2–204（203 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LO 2–204（203 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

25 other PDB entries and 25 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SH61_CHATD
Isoform —
PDB entities 22
Chains and sequence ranges Author chain LO； PDBConstruct 1–204； UniProt 1–204

60S ribosomal protein l17-like protein

OrganismNot specified

UniProt G0SGY1

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LP； UniProt 2–187 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LP 1–187（187 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LP 1–187（187 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LP 1–187（187 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LP 1–187（187 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9P Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Mak16 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 31 PDB declaration: 33-meric
Chain LP 1–187（187 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8I9R Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 46 PDB declaration: 49-meric
Chain LP 1–187（187 aa）
Not recorded ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9T Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 55-meric
Chain LP 1–187（187 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain LP 1–187（187 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain LP 1–187（187 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LP 1–187（187 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain LP 1–187（187 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LP 1–187（187 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain LP 1–187（187 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LP 1–187（187 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain LP 1–187（187 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LP 1–187（187 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain LP 1–187（187 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain LP 1–187（187 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain LP 1–187（187 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LP 1–187（187 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain LP 1–187（187 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain LP 1–187（187 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain LP 1–187（187 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LP 1–187（187 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LP 1–187（187 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

25 other PDB entries and 25 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SGY1_CHATD
Isoform —
PDB entities 23
Chains and sequence ranges Author chain LP； PDBConstruct 1–186； UniProt 2–187

Ribosomal protein L18-like protein

OrganismNot specified

UniProt G0S9B5

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LQ； UniProt 1–213 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LQ 1–213（213 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LQ 1–213（213 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LQ 1–213（213 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LQ 1–213（213 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9P Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Mak16 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 31 PDB declaration: 33-meric
Chain LQ 1–213（213 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8I9R Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 46 PDB declaration: 49-meric
Chain LQ 1–213（213 aa）
Not recorded ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9T Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 55-meric
Chain LQ 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain LQ 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain LQ 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LQ 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain LQ 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LQ 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain LQ 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LQ 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain LQ 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LQ 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain LQ 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain LQ 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain LQ 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LQ 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain LQ 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain LQ 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain LQ 1–213（213 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LQ 1–213（213 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LQ 1–213（213 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

25 other PDB entries and 25 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S9B5_CHATD
Isoform —
PDB entities 24
Chains and sequence ranges Author chain LQ； PDBConstruct 1–213； UniProt 1–213

Ribosomal protein L19

OrganismNot specified

UniProt G0S9T3

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LR； UniProt 2707–2898 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LR 2707–2898（192 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LR 2707–2898（192 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LR 2707–2898（192 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LR 2707–2898（192 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LR 1–2898（2898 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain LR 1–2898（2898 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LR 1–2898（2898 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain LR 1–2898（2898 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8ONZ Chaetomium thermophilum Methionine Aminopeptidase 2 at the 80S ribosome Deposited 2023-04-04 Different construct Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 6 PDB declaration: octameric
Chain LR 1–2898（2898 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LR 1–2898（2898 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain LR 1–2898（2898 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LR 1–2898（2898 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain LR 1–2898（2898 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain LR 1–2898（2898 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain LR 1–2898（2898 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LR 1–2898（2898 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain LR 1–2898（2898 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain LR 1–2898（2898 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain LR 1–2898（2898 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LR 2707–2898（192 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LR 2707–2898（192 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

21 other PDB entries and 21 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S9T3_CHATD
Isoform —
PDB entities 25
Chains and sequence ranges Author chain LR； PDBConstruct 1–192； UniProt 2707–2898

60S ribosomal protein L20

OrganismNot specified

UniProt G0SCE2

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LS； UniProt 1–174 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LS 1–174（174 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LS 1–174（174 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LS 1–174（174 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LS 1–174（174 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9P Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Mak16 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 31 PDB declaration: 33-meric
Chain LS 1–174（174 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8I9R Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 46 PDB declaration: 49-meric
Chain LS 1–174（174 aa）
Not recorded ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9T Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 55-meric
Chain LS 1–174（174 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain LS 1–174（174 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain LS 1–174（174 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LS 1–174（174 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain LS 1–174（174 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LS 1–174（174 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain LS 1–174（174 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LS 1–174（174 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain LS 1–174（174 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LS 1–174（174 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain LS 1–174（174 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain LS 1–174（174 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain LS 1–174（174 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LS 1–174（174 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain LS 1–174（174 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain LS 1–174（174 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain LS 1–174（174 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LS 1–174（174 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LS 1–174（174 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

25 other PDB entries and 25 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SCE2_CHATD
Isoform —
PDB entities 26
Chains and sequence ranges Author chain LS； PDBConstruct 1–174； UniProt 1–174

60S ribosomal protein l21-like protein

OrganismNot specified

UniProt G0S0Z3

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LT； UniProt 1–160 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LT 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LT 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LT 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LT 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9P Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Mak16 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 31 PDB declaration: 33-meric
Chain LT 1–160（160 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8I9R Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 46 PDB declaration: 49-meric
Chain LT 1–160（160 aa）
Not recorded ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9T Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 55-meric
Chain LT 1–160（160 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain LT 1–160（160 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain LT 1–160（160 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LT 1–160（160 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain LT 1–160（160 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LT 1–160（160 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain LT 1–160（160 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LT 1–160（160 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain LT 1–160（160 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LT 1–160（160 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain LT 1–160（160 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain LT 1–160（160 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain LT 1–160（160 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LT 1–160（160 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain LT 1–160（160 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain LT 1–160（160 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain LT 1–160（160 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LT 1–160（160 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LT 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

25 other PDB entries and 25 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S0Z3_CHATD
Isoform —
PDB entities 27
Chains and sequence ranges Author chain LT； PDBConstruct 1–160； UniProt 1–160

60S ribosomal protein L22-like protein

OrganismNot specified

UniProt G0SDS8

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LU； UniProt 1–127 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LU 1–127（127 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LU 1–127（127 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LU 1–127（127 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LU 1–127（127 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LU 1–127（127 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain LU 1–127（127 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LU 1–127（127 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain LU 1–127（127 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LU 1–127（127 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain LU 1–127（127 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LU 1–127（127 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain LU 1–127（127 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain LU 1–127（127 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain LU 1–127（127 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LU 1–127（127 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain LU 1–127（127 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain LU 1–127（127 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain LU 1–127（127 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LU 1–127（127 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LU 1–127（127 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

20 other PDB entries and 20 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SDS8_CHATD
Isoform —
PDB entities 28
Chains and sequence ranges Author chain LU； PDBConstruct 1–127； UniProt 1–127

60S ribosomal protein l23-like protein

OrganismNot specified

UniProt G0SI44

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LV； UniProt 1–139 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LV 1–139（139 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LV 1–139（139 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LV 1–139（139 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LV 1–139（139 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9R Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 46 PDB declaration: 49-meric
Chain LV 1–139（139 aa）
Not recorded ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9T Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 55-meric
Chain LV 1–139（139 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain LV 1–139（139 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain LV 1–139（139 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LV 1–139（139 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain LV 1–139（139 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LV 1–139（139 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain LV 1–139（139 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LV 1–139（139 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain LV 1–139（139 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LV 1–139（139 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain LV 1–139（139 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain LV 1–139（139 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain LV 1–139（139 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LV 1–139（139 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain LV 1–139（139 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain LV 1–139（139 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain LV 1–139（139 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LV 1–139（139 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LV 1–139（139 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

24 other PDB entries and 24 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SI44_CHATD
Isoform —
PDB entities 29
Chains and sequence ranges Author chain LV； PDBConstruct 1–139； UniProt 1–139

60S ribosomal protein L24

OrganismNot specified

UniProt G2Q623

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LW； UniProt 1–161 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name G2Q623_MYCTT
Isoform —
PDB entities 30
Chains and sequence ranges Author chain LW； PDBConstruct 1–161； UniProt 1–161

60S ribosomal protein L25-like protein

OrganismNot specified

UniProt G0S507

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LX； UniProt 1–156 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LX 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LX 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LX 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LX 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9P Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Mak16 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 31 PDB declaration: 33-meric
Chain LX 1–156（156 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8I9T Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 55-meric
Chain LX 1–156（156 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain LX 1–156（156 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain LX 1–156（156 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LX 1–156（156 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain LX 1–156（156 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LX 1–156（156 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain LX 1–156（156 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8ONZ Chaetomium thermophilum Methionine Aminopeptidase 2 at the 80S ribosome Deposited 2023-04-04 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 6 PDB declaration: octameric
Chain LX 1–156（156 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LX 1–156（156 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain LX 1–156（156 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LX 1–156（156 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain LX 1–156（156 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain LX 1–156（156 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain LX 1–156（156 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LX 1–156（156 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain LX 1–156（156 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain LX 1–156（156 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain LX 1–156（156 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LX 1–156（156 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LX 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

25 other PDB entries and 25 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S507_CHATD
Isoform —
PDB entities 31
Chains and sequence ranges Author chain LX； PDBConstruct 1–156； UniProt 1–156

60S ribosomal protein L26-like protein

OrganismNot specified

UniProt G0RYN9

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LY； UniProt 1–138 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LY 1–138（138 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LY 1–138（138 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LY 1–138（138 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LY 1–138（138 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9P Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Mak16 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 31 PDB declaration: 33-meric
Chain LY 1–138（138 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8I9R Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 46 PDB declaration: 49-meric
Chain LY 1–138（138 aa）
Not recorded ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9T Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 55-meric
Chain LY 1–138（138 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain LY 1–138（138 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain LY 1–138（138 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LY 1–138（138 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain LY 1–138（138 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LY 1–138（138 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain LY 1–138（138 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8ONZ Chaetomium thermophilum Methionine Aminopeptidase 2 at the 80S ribosome Deposited 2023-04-04 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 6 PDB declaration: octameric
Chain LY 1–138（138 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LY 1–138（138 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain LY 1–138（138 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LY 1–138（138 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain LY 1–138（138 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain LY 1–138（138 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain LY 1–138（138 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LY 1–138（138 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain LY 1–138（138 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain LY 1–138（138 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain LY 1–138（138 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LY 1–138（138 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LY 1–138（138 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

26 other PDB entries and 26 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0RYN9_CHATD
Isoform —
PDB entities 32
Chains and sequence ranges Author chain LY； PDBConstruct 1–138； UniProt 1–138

60S ribosomal protein L27

OrganismNot specified

UniProt G0RZE9

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain LZ； UniProt 1–135 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain LZ 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain LZ 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LZ 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain LZ 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LZ 1–135（135 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain LZ 1–135（135 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain LZ 1–135（135 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain LZ 1–135（135 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LZ 1–135（135 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain LZ 1–135（135 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LZ 1–135（135 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain LZ 1–135（135 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain LZ 1–135（135 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain LZ 1–135（135 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain LZ 1–135（135 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain LZ 1–135（135 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain LZ 1–135（135 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain LZ 1–135（135 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain LZ 1–135（135 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain LZ 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

20 other PDB entries and 20 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0RZE9_CHATD
Isoform —
PDB entities 33
Chains and sequence ranges Author chain LZ； PDBConstruct 1–135； UniProt 1–135

Ribosomal protein L18e/L15P domain-containing protein

OrganismNot specified

UniProt G2QB77

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain La； UniProt 1–149 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name G2QB77_MYCTT
Isoform —
PDB entities 34
Chains and sequence ranges Author chain La； PDBConstruct 1–149； UniProt 1–149

60S ribosomal protein L29

OrganismNot specified

UniProt Q2H9W4

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain Lb； UniProt 1–65 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain Lb 1–65（65 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Lb 1–65（65 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain Lb 1–65（65 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain Lb 1–65（65 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain Lb 1–65（65 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

5 other PDB entries and 5 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name Q2H9W4_CHAGB
Isoform —
PDB entities 35
Chains and sequence ranges Author chain Lb； PDBConstruct 1–65； UniProt 1–65

60S ribosomal protein l30-like protein

OrganismNot specified

UniProt G0SEI0

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain Lc； UniProt 1–108 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain Lc 1–108（108 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Lc 1–108（108 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Lc 1–108（108 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Lc 1–108（108 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain Lc 1–108（108 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain Lc 1–108（108 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain Lc 1–108（108 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain Lc 1–108（108 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Lc 1–108（108 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain Lc 1–108（108 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Lc 1–108（108 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain Lc 1–108（108 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain Lc 1–108（108 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain Lc 1–108（108 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Lc 1–108（108 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain Lc 1–108（108 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain Lc 1–108（108 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain Lc 1–108（108 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain Lc 1–108（108 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain Lc 1–108（108 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

20 other PDB entries and 20 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SEI0_CHATD
Isoform —
PDB entities 36
Chains and sequence ranges Author chain Lc； PDBConstruct 1–108； UniProt 1–108

Putative 60S ribosomal protein

OrganismNot specified

UniProt G0SD68

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain Ld； UniProt 1–120 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain Ld 1–120（120 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Ld 1–120（120 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Ld 1–120（120 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Ld 1–120（120 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain Ld 1–120（120 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain Ld 1–120（120 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain Ld 1–120（120 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain Ld 1–120（120 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain Ld 1–120（120 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain Ld 1–120（120 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Ld 1–120（120 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain Ld 1–120（120 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Ld 1–120（120 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain Ld 1–120（120 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain Ld 1–120（120 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain Ld 1–120（120 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Ld 1–120（120 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain Ld 1–120（120 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain Ld 1–120（120 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain Ld 1–120（120 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain Ld 1–120（120 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain Ld 1–120（120 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

22 other PDB entries and 22 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SD68_CHATD
Isoform —
PDB entities 37
Chains and sequence ranges Author chain Ld； PDBConstruct 1–120； UniProt 1–120

60S ribosomal protein L32-like protein

OrganismNot specified

UniProt G0S6V4

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain Le； UniProt 1–131 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain Le 1–131（131 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Le 1–131（131 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Le 1–131（131 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Le 1–131（131 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9P Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Mak16 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 31 PDB declaration: 33-meric
Chain Le 1–131（131 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8I9R Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 46 PDB declaration: 49-meric
Chain Le 1–131（131 aa）
Not recorded ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9T Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 55-meric
Chain Le 1–131（131 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain Le 1–131（131 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain Le 1–131（131 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain Le 1–131（131 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain Le 1–131（131 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain Le 1–131（131 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain Le 1–131（131 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Le 1–131（131 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain Le 1–131（131 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Le 1–131（131 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain Le 1–131（131 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain Le 1–131（131 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain Le 1–131（131 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Le 1–131（131 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain Le 1–131（131 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain Le 1–131（131 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain Le 1–131（131 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain Le 1–131（131 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain Le 1–131（131 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

25 other PDB entries and 25 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S6V4_CHATD
Isoform —
PDB entities 38
Chains and sequence ranges Author chain Le； PDBConstruct 1–131； UniProt 1–131

60S ribosomal protein l33-like protein

OrganismNot specified

UniProt G0SCL3

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain Lf； UniProt 1–109 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain Lf 1–109（109 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Lf 1–109（109 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Lf 1–109（109 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Lf 1–109（109 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9P Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Mak16 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 31 PDB declaration: 33-meric
Chain Lf 1–109（109 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8I9R Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 46 PDB declaration: 49-meric
Chain Lf 1–109（109 aa）
Not recorded ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9T Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 55-meric
Chain Lf 1–109（109 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain Lf 1–109（109 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain Lf 1–109（109 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain Lf 1–109（109 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain Lf 1–109（109 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain Lf 1–109（109 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain Lf 1–109（109 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Lf 1–109（109 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain Lf 1–109（109 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Lf 1–109（109 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain Lf 1–109（109 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain Lf 1–109（109 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain Lf 1–109（109 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Lf 1–109（109 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain Lf 1–109（109 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain Lf 1–109（109 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain Lf 1–109（109 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain Lf 1–109（109 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain Lf 1–109（109 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

25 other PDB entries and 25 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SCL3_CHATD
Isoform —
PDB entities 39
Chains and sequence ranges Author chain Lf； PDBConstruct 1–109； UniProt 1–109

Ribosomal protein l34-like protein

OrganismNot specified

UniProt G0SFN0

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain Lg； UniProt 1–119 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain Lg 1–119（119 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Lg 1–119（119 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Lg 1–119（119 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Lg 1–119（119 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain Lg 1–119（119 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain Lg 1–119（119 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain Lg 1–119（119 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain Lg 1–119（119 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Lg 1–119（119 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain Lg 1–119（119 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Lg 1–119（119 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain Lg 1–119（119 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain Lg 1–119（119 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain Lg 1–119（119 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Lg 1–119（119 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain Lg 1–119（119 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain Lg 1–119（119 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain Lg 1–119（119 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain Lg 1–119（119 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain Lg 1–119（119 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

20 other PDB entries and 20 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SFN0_CHATD
Isoform —
PDB entities 40
Chains and sequence ranges Author chain Lg； PDBConstruct 1–119； UniProt 1–119

dolichyl-diphosphooligosaccharide--protein glycotransferase

OrganismNot specified

UniProt G0S0D7

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain Lh； UniProt 1–126 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain Lh 1–126（126 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Lh 1–126（126 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Lh 1–126（126 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Lh 1–126（126 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9P Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Mak16 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 31 PDB declaration: 33-meric
Chain Lh 1–935（935 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8I9R Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 46 PDB declaration: 49-meric
Chain Lh 1–935（935 aa）
Not recorded ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9T Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 55-meric
Chain Lh 1–935（935 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain Lh 1–935（935 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain Lh 1–935（935 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain Lh 1–935（935 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain Lh 1–935（935 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain Lh 1–935（935 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different construct Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain Lh 1–935（935 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8ONZ Chaetomium thermophilum Methionine Aminopeptidase 2 at the 80S ribosome Deposited 2023-04-04 Different construct Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 6 PDB declaration: octameric
Chain Lh 1–935（935 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Lh 1–935（935 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain Lh 1–935（935 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Lh 1–935（935 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain Lh 1–935（935 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain Lh 1–935（935 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain Lh 1–935（935 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Lh 1–935（935 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain Lh 1–935（935 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain Lh 1–935（935 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain Lh 1–935（935 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain Lh 1–126（126 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain Lh 1–126（126 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

26 other PDB entries and 26 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S0D7_CHATD
Isoform —
PDB entities 41
Chains and sequence ranges Author chain Lh； PDBConstruct 1–126； UniProt 1–126

60S ribosomal protein L36

OrganismNot specified

UniProt G0SBN1

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain Li； UniProt 1–110 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain Li 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Li 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Li 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Li 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9P Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Mak16 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 31 PDB declaration: 33-meric
Chain Li 1–110（110 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8I9R Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 46 PDB declaration: 49-meric
Chain Li 1–110（110 aa）
Not recorded ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9T Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 55-meric
Chain Li 1–110（110 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain Li 1–110（110 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain Li 1–110（110 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain Li 1–110（110 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain Li 1–110（110 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain Li 1–110（110 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain Li 1–110（110 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Li 1–110（110 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain Li 1–110（110 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Li 1–110（110 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain Li 1–110（110 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain Li 1–110（110 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain Li 1–110（110 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Li 1–110（110 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain Li 1–110（110 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain Li 1–110（110 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain Li 1–110（110 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain Li 1–110（110 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain Li 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

25 other PDB entries and 25 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SBN1_CHATD
Isoform —
PDB entities 42
Chains and sequence ranges Author chain Li； PDBConstruct 1–110； UniProt 1–110

Ribosomal protein L37

OrganismNot specified

UniProt G0S101

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain Lj； UniProt 1–95 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain Lj 1–95（95 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Lj 1–95（95 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Lj 1–95（95 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Lj 1–95（95 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9P Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Mak16 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 31 PDB declaration: 33-meric
Chain Lj 1–95（95 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8I9R Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 46 PDB declaration: 49-meric
Chain Lj 1–95（95 aa）
Not recorded ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9T Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 55-meric
Chain Lj 1–95（95 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8I9V Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 56-meric
Chain Lj 1–95（95 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain Lj 1–95（95 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain Lj 1–95（95 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain Lj 1–95（95 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain Lj 1–95（95 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain Lj 1–95（95 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Lj 1–95（95 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain Lj 1–95（95 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Lj 1–95（95 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain Lj 1–95（95 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain Lj 1–95（95 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain Lj 1–95（95 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Lj 1–95（95 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain Lj 1–95（95 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain Lj 1–95（95 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain Lj 1–95（95 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain Lj 1–95（95 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain Lj 1–95（95 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

25 other PDB entries and 25 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S101_CHATD
Isoform —
PDB entities 43
Chains and sequence ranges Author chain Lj； PDBConstruct 1–95； UniProt 1–95

60S ribosomal protein L38

OrganismNot specified

UniProt G2Q8J4

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain Lk； UniProt 1–80 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name G2Q8J4_MYCTT
Isoform —
PDB entities 44
Chains and sequence ranges Author chain Lk； PDBConstruct 1–80； UniProt 1–80

60S ribosomal protein L39

OrganismNot specified

UniProt Q2H9R2

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain Ll； UniProt 1–51 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain Ll 1–51（51 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Ll 1–51（51 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain Ll 1–51（51 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain Ll 1–51（51 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain Ll 1–51（51 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain Ll 1–51（51 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Ll 1–51（51 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain Ll 1–51（51 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Ll 1–51（51 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain Ll 1–51（51 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain Ll 1–51（51 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain Ll 1–51（51 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Ll 1–51（51 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain Ll 1–51（51 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain Ll 1–51（51 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain Ll 1–51（51 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain Ll 1–51（51 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

17 other PDB entries and 17 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name Q2H9R2_CHAGB
Isoform —
PDB entities 45
Chains and sequence ranges Author chain Ll； PDBConstruct 1–51； UniProt 1–51

Ubiquitin-like domain-containing protein

OrganismNot specified

UniProt A0A2A9PNA8

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain Lm； UniProt 51–178 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name A0A2A9PNA8_OPHUN
Isoform —
PDB entities 46
Chains and sequence ranges Author chain Lm； PDBConstruct 1–128； UniProt 51–178

60S ribosomal protein L41-A

OrganismNot specified

UniProt P0CX86

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain Ln； UniProt 1–25 Chain Lr； UniProt 1–25 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
3J6X S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 5 degree rotation (Class II) Deposited 2014-04-16 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 80-meric
Chain 81 1–25（25 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer 45 mM HEPES/KOH, 10 mM MgCl2, 100 mM KCl, 2.5 mM spermine, 2 mM BME, 0.5 U/uL RNasin；pH 7.5；45 mM HEPES/KOH, 10 mM MgCl2, 100 mM KCl, 2.5 mM spermine, 2 mM BME, 0.5 U/uL RNasin
cryo-EM vitrification conditions Fresh glow discharge, 7 second blot；Cryogen ETHANE；Fresh glow discharge, 7 second blot before plunging into liquid ehtane (FEI VITROBOT MARK II).
Resolution 6.10 Å
3J6Y S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 2 degree rotation (Class I) Deposited 2014-04-16 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 80-meric
Chain 81 1–25（25 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer 45 mM HEPES/KOH, 10 mM MgCl2, 100 mM KCl, 2.5 mM spermine, 2 mM BME, 0.5 U/uL RNasin；pH 7.5；45 mM HEPES/KOH, 10 mM MgCl2, 100 mM KCl, 2.5 mM spermine, 2 mM BME, 0.5 U/uL RNasin
cryo-EM vitrification conditions Fresh glow discharge, 7 second blot；Cryogen ETHANE；Fresh glow discharge, 7 second blot before plunging into liquid ehtane (FEI VITROBOT MARK II).
Resolution 6.10 Å
3J77 Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA) Deposited 2014-05-29 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain 91 1–25（25 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer 20 mM Tris-HCl, 50 mM NH4Cl, 20 mM MgCl2；pH 7.5；20 mM Tris-HCl, 50 mM NH4Cl, 20 mM MgCl2
cryo-EM vitrification conditions Cryogen ETHANE；Plunged into liquid ethane (FEI VITROBOT MARK II)
Resolution 6.20 Å
3J78 Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs) Deposited 2014-05-29 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 84-meric
Chain 91 1–25（25 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer 20 mM Tris-HCl, 50 mM NH4Cl, 20 mM MgCl2；pH 7.5；20 mM Tris-HCl, 50 mM NH4Cl, 20 mM MgCl2
cryo-EM vitrification conditions Cryogen ETHANE；Plunged into liquid ethane (FEI VITROBOT MARK II)
Resolution 6.30 Å
3J80 CryoEM structure of 40S-eIF1-eIF1A preinitiation complex Deposited 2014-08-28 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 36 PDB declaration: 37-meric
Chain h 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 67 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer 20 mM MES-KOH, 40 mM potassium acetate, 10 mM ammonium acetate, 8 mM magnesium acetate, 2 mM DTT；pH 6.5；20 mM MES-KOH, 40 mM potassium acetate, 10 mM ammonium acetate, 8 mM magnesium acetate, 2 mM DTT
cryo-EM vitrification conditions Blot for 2.5 seconds before plunging；120 K；Cryogen ETHANE；Blot for 2.5 seconds before plunging into liquid ethane (FEI VITROBOT MARK I)
Resolution 3.75 Å
3J81 CryoEM structure of a partial yeast 48S preinitiation complex Deposited 2014-08-29 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 39 PDB declaration: 42-meric
Chain h 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 81 ZN ZINC ION × 3 MET METHIONINE × 1 ELECTRON MICROSCOPY
cryo-EM buffer 20 mM MES-KOH, 40 mM potassium acetate, 10 mM ammonium acetate, 8 mM magnesium acetate, 2 mM DTT；pH 6.5；20 mM MES-KOH, 40 mM potassium acetate, 10 mM ammonium acetate, 8 mM magnesium acetate, 2 mM DTT
cryo-EM vitrification conditions Blot for 2.5 seconds before plunging；120 K；Cryogen ETHANE；Blot for 2.5 seconds before plunging into liquid ethane (FEI VITROBOT MARK I)
Resolution 4.00 Å
3JAM CryoEM structure of 40S-eIF1A-eIF1 complex from yeast Deposited 2015-06-17 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 36 PDB declaration: 37-meric
Chain h 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 80 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer 20 mM MES-KOH, 40 mM potassium acetate, 10 mM ammonium acetate, 8 mM magnesium acetate, 2 mM DTT；pH 6.5；20 mM MES-KOH, 40 mM potassium acetate, 10 mM ammonium acetate, 8 mM magnesium acetate, 2 mM DTT
cryo-EM vitrification conditions Blot for 2.5 to 3 seconds before plunging；120 K；Cryogen ETHANE；Blot for 2.5 to 3 seconds before plunging into liquid ethane (FEI VITROBOT MARK I).
Resolution 3.46 Å
3JAP Structure of a partial yeast 48S preinitiation complex in closed conformation Deposited 2015-06-18 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 44 PDB declaration: 47-meric
Chain h 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 81 ZN ZINC ION × 4 MET METHIONINE × 1 GCP PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER × 1 ELECTRON MICROSCOPY
cryo-EM buffer 20 mM MES-KOH, 40 mM potassium acetate, 10 mM ammonium acetate, 8 mM magnesium acetate, 2 mM DTT；pH 6.5；20 mM MES-KOH, 40 mM potassium acetate, 10 mM ammonium acetate, 8 mM magnesium acetate, 2 mM DTT
cryo-EM vitrification conditions Blot for 2.5 to 3 seconds before plunging；120 K；Cryogen ETHANE；Blot for 2.5 to 3 seconds before plunging into liquid ethane (FEI VITROBOT MARK I).
Resolution 4.90 Å
4U3M Crystal structure of Anisomycin bound to the yeast 80S ribosome Deposited 2014-07-22 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-meric
Chain Q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 678 OHX osmium (III) hexammine × 558 ZN ZINC ION × 8 ANM ANISOMYCIN × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.00 Å R-free 0.245
4U3M Crystal structure of Anisomycin bound to the yeast 80S ribosome Deposited 2014-07-22 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 79 PDB declaration: 83-meric
Chain q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 732 OHX osmium (III) hexammine × 575 ZN ZINC ION × 8 ANM ANISOMYCIN × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.00 Å R-free 0.245
4U3N Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome Deposited 2014-07-22 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 80-meric
Chain Q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 677 OHX osmium (III) hexammine × 558 ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.20 Å R-free 0.237
4U3N Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome Deposited 2014-07-22 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 79 PDB declaration: 84-meric
Chain q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 731 OHX osmium (III) hexammine × 575 ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.20 Å R-free 0.237
4U3U Crystal structure of Cycloheximide bound to the yeast 80S ribosome Deposited 2014-07-22 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-meric
Chain Q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 678 OHX osmium (III) hexammine × 558 ZN ZINC ION × 8 3HE 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 2.90 Å R-free 0.245
4U3U Crystal structure of Cycloheximide bound to the yeast 80S ribosome Deposited 2014-07-22 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 79 PDB declaration: 83-meric
Chain q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 730 OHX osmium (III) hexammine × 575 ZN ZINC ION × 8 3HE 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 2.90 Å R-free 0.245
4U4N Crystal structure of Edeine bound to the yeast 80S ribosome Deposited 2014-07-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-meric
Chain Q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 676 OHX osmium (III) hexammine × 557 EDE EDEINE B × 1 ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.10 Å R-free 0.252
4U4N Crystal structure of Edeine bound to the yeast 80S ribosome Deposited 2014-07-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 79 PDB declaration: 83-meric
Chain q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 730 OHX osmium (III) hexammine × 574 EDE EDEINE B × 1 ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.10 Å R-free 0.252
4U4O Crystal structure of Geneticin bound to the yeast 80S ribosome Deposited 2014-07-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-meric
Chain Q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 678 OHX osmium (III) hexammine × 556 GET GENETICIN × 1 ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.60 Å R-free 0.267
4U4O Crystal structure of Geneticin bound to the yeast 80S ribosome Deposited 2014-07-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 79 PDB declaration: 83-meric
Chain q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 732 OHX osmium (III) hexammine × 575 ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.60 Å R-free 0.267
4U4Q Crystal structure of Homoharringtonine bound to the yeast 80S ribosome Deposited 2014-07-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-meric
Chain Q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 678 OHX osmium (III) hexammine × 558 ZN ZINC ION × 8 HMT (3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.00 Å R-free 0.255
4U4Q Crystal structure of Homoharringtonine bound to the yeast 80S ribosome Deposited 2014-07-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 79 PDB declaration: 83-meric
Chain q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 733 OHX osmium (III) hexammine × 575 ZN ZINC ION × 8 HMT (3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.00 Å R-free 0.255
4U4R Crystal structure of Lactimidomycin bound to the yeast 80S ribosome Deposited 2014-07-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-meric
Chain Q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 678 OHX osmium (III) hexammine × 558 ZN ZINC ION × 8 3H3 4-{(2R,5S,6E)-2-hydroxy-5-methyl-7-[(2R,3S,4E,6Z,10E)-3-methyl-12-oxooxacyclododeca-4,6,10-trien-2-yl]-4-oxooct-6-en-1-yl}piperidine-2,6-dione × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 2.80 Å R-free 0.246
4U4R Crystal structure of Lactimidomycin bound to the yeast 80S ribosome Deposited 2014-07-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 79 PDB declaration: 83-meric
Chain q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 730 OHX osmium (III) hexammine × 575 ZN ZINC ION × 8 3H3 4-{(2R,5S,6E)-2-hydroxy-5-methyl-7-[(2R,3S,4E,6Z,10E)-3-methyl-12-oxooxacyclododeca-4,6,10-trien-2-yl]-4-oxooct-6-en-1-yl}piperidine-2,6-dione × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 2.80 Å R-free 0.246
4U4U Crystal structure of Lycorine bound to the yeast 80S ribosome Deposited 2014-07-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-MERIC
Chain Q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 679 OHX osmium (III) hexammine × 557 ZN ZINC ION × 8 3KD (1S,2S,12bS,12cS)-2,4,5,7,12b,12c-hexahydro-1H-[1,3]dioxolo[4,5-j]pyrrolo[3,2,1-de]phenanthridine-1,2-diol × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.00 Å R-free 0.259
4U4U Crystal structure of Lycorine bound to the yeast 80S ribosome Deposited 2014-07-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 79 PDB declaration: 83-MERIC
Chain q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 733 OHX osmium (III) hexammine × 576 ZN ZINC ION × 8 3KD (1S,2S,12bS,12cS)-2,4,5,7,12b,12c-hexahydro-1H-[1,3]dioxolo[4,5-j]pyrrolo[3,2,1-de]phenanthridine-1,2-diol × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.00 Å R-free 0.259
4U4Y Crystal structure of Pactamycin bound to the yeast 80S ribosome Deposited 2014-07-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-meric
Chain Q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 678 OHX osmium (III) hexammine × 556 PCY Pactamycin × 1 ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.20 Å R-free 0.245
4U4Y Crystal structure of Pactamycin bound to the yeast 80S ribosome Deposited 2014-07-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 79 PDB declaration: 85-meric
Chain q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 732 OHX osmium (III) hexammine × 574 PCY Pactamycin × 1 ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.20 Å R-free 0.245
4U4Z Crystal structure of Phyllanthoside bound to the yeast 80S ribosome Deposited 2014-07-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 80-meric
Chain Q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 677 OHX osmium (III) hexammine × 558 ZN ZINC ION × 8 3K5 3-O-acetyl-2-O-(3-O-acetyl-6-deoxy-beta-D-glucopyranosyl)-6-deoxy-1-O-{[(2R,2'S,3a'R,4''S,5''R,6'S,7a'S)-5''-methyl-4''-{[(2E)-3-phenylprop-2-enoyl]oxy}decahydrodispiro[oxirane-2,3'-[1]benzofuran-2',2''-pyran]-6'-yl]carbonyl}-beta-D-glucopyranose × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.10 Å R-free 0.252
4U4Z Crystal structure of Phyllanthoside bound to the yeast 80S ribosome Deposited 2014-07-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 79 PDB declaration: 95-meric
Chain q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 731 OHX osmium (III) hexammine × 575 ZN ZINC ION × 8 3K5 3-O-acetyl-2-O-(3-O-acetyl-6-deoxy-beta-D-glucopyranosyl)-6-deoxy-1-O-{[(2R,2'S,3a'R,4''S,5''R,6'S,7a'S)-5''-methyl-4''-{[(2E)-3-phenylprop-2-enoyl]oxy}decahydrodispiro[oxirane-2,3'-[1]benzofuran-2',2''-pyran]-6'-yl]carbonyl}-beta-D-glucopyranose × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.10 Å R-free 0.252
4U53 Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome Deposited 2014-07-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-meric
Chain Q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 676 OHX osmium (III) hexammine × 556 ZN ZINC ION × 8 3J6 (3beta,7alpha)-3,7,15-trihydroxy-12,13-epoxytrichothec-9-en-8-one × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.30 Å R-free 0.255
4U53 Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome Deposited 2014-07-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 79 PDB declaration: 83-meric
Chain q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 730 OHX osmium (III) hexammine × 574 ZN ZINC ION × 8 3J6 (3beta,7alpha)-3,7,15-trihydroxy-12,13-epoxytrichothec-9-en-8-one × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.30 Å R-free 0.255
4U55 Crystal structure of Cryptopleurine bound to the yeast 80S ribosome Deposited 2014-07-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-MERIC
Chain Q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 678 OHX osmium (III) hexammine × 557 3K8 (14aR)-2,3,6-trimethoxy-11,12,13,14,14a,15-hexahydro-9H-dibenzo[f,h]pyrido[1,2-b]isoquinoline × 1 ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.20 Å R-free 0.246
4U55 Crystal structure of Cryptopleurine bound to the yeast 80S ribosome Deposited 2014-07-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 79 PDB declaration: 83-MERIC
Chain q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 732 OHX osmium (III) hexammine × 574 3K8 (14aR)-2,3,6-trimethoxy-11,12,13,14,14a,15-hexahydro-9H-dibenzo[f,h]pyrido[1,2-b]isoquinoline × 1 ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.20 Å R-free 0.246
4U56 Crystal structure of Blasticidin S bound to the yeast 80S ribosome Deposited 2014-07-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 80-meric
Chain Q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 675 OHX osmium (III) hexammine × 558 ZN ZINC ION × 8 BLS BLASTICIDIN S × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.45 Å R-free 0.260
4U56 Crystal structure of Blasticidin S bound to the yeast 80S ribosome Deposited 2014-07-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 79 PDB declaration: 85-meric
Chain q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 732 OHX osmium (III) hexammine × 574 ZN ZINC ION × 8 BLS BLASTICIDIN S × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.45 Å R-free 0.260
4V88 The structure of the eukaryotic ribosome at 3.0 A resolution. Deposited 2011-10-11 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-meric
Chain Bn 1–25（25 aa）
Not recorded OHX osmium (III) hexammine × 657 MG MAGNESIUM ION × 1035 ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Resolution 3.00 Å R-free 0.229
4V88 The structure of the eukaryotic ribosome at 3.0 A resolution. Deposited 2011-10-11 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 79 PDB declaration: 83-meric
Chain Dn 1–25（25 aa）
Not recorded OHX osmium (III) hexammine × 688 MG MAGNESIUM ION × 1170 ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Resolution 3.00 Å R-free 0.229
4V8T Cryo-EM Structure of the 60S Ribosomal Subunit in Complex with Arx1 and Rei1 Deposited 2012-08-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 46 PDB declaration: 50-meric
Chain n 1–25（25 aa）
Not recorded ZN ZINC ION × 4 ELECTRON MICROSCOPY
cryo-EM buffer 20 MM HEPES-NAOH PH 8.0, 50 MM NACL, 5 MM BETA- MERCAPTOETHANOL, 5 MM MGCL2；pH 8；20 MM HEPES-NAOH PH 8.0, 50 MM NACL, 5 MM BETA- MERCAPTOETHANOL, 5 MM MGCL2
cryo-EM vitrification conditions Cryogen ETHANE；PLUNGE FREEZING IN LIQUID ETHANE AFTER MANUAL BLOTTING USING A MANUAL PLUNGE FREEZING DEVICE
Resolution 8.10 Å
5DAT Complex of yeast 80S ribosome with hypusine-containing eIF5A Deposited 2015-08-20 Different construct Different mutation/modification Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 81 PDB declaration: 86-MERIC
Chain q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 580 OHX osmium (III) hexammine × 601 ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；277.15 K；Tris-acetate pH7.0, potassium thiocyanate, magnesium acetate, glycerol, spermidine, PEG 20000
Resolution 3.15 Å R-free 0.252
5DAT Complex of yeast 80S ribosome with hypusine-containing eIF5A Deposited 2015-08-20 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 75 PDB declaration: 86-MERIC
Chain Q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 528 OHX osmium (III) hexammine × 565 ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；277.15 K；Tris-acetate pH7.0, potassium thiocyanate, magnesium acetate, glycerol, spermidine, PEG 20000
Resolution 3.15 Å R-free 0.252
5DC3 Complex of yeast 80S ribosome with non-modified eIF5A Deposited 2015-08-23 Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 81-meric
Chain Q1 1–25（25 aa）
Not recorded ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；277.15 K；Tris-acetate pH7.0, potassium thiocyanate, magnesium acetate, glycerol, spermidine, PEG 20000
Resolution 3.25 Å R-free 0.301
5DC3 Complex of yeast 80S ribosome with non-modified eIF5A Deposited 2015-08-23 Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 80 PDB declaration: 81-meric
Chain q1 1–25（25 aa）
Not recorded ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；277.15 K；Tris-acetate pH7.0, potassium thiocyanate, magnesium acetate, glycerol, spermidine, PEG 20000
Resolution 3.25 Å R-free 0.301
5DGE Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome Deposited 2015-08-27 Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 155 PDB declaration: 165-meric
Chain Q1 1–25（25 aa）
Chain q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 1093 OHX osmium (III) hexammine × 1169 ZN ZINC ION × 16 SPS SPARSOMYCIN × 2 PRO PROLINE × 4 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；277.15 K；Tris-acetate pH7.0, potassium thiocyanate, magnesium acetate, glycerol, spermidine, PEG 20000
Resolution 3.45 Å R-free 0.263
5DGF Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog Deposited 2015-08-27 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: TRIMERIC
Chain Q1 1–25（25 aa）
Not recorded ZN ZINC ION × 8 SPS SPARSOMYCIN × 1 MG MAGNESIUM ION × 4 OHX osmium (III) hexammine × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；277.15 K；Tris-acetate pH7.0, potassium thiocyanate, magnesium acetate, glycerol, spermidine, PEG 20000
Resolution 3.30 Å R-free 0.310
5DGF Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog Deposited 2015-08-27 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 80 PDB declaration: TRIMERIC
Chain q1 1–25（25 aa）
Not recorded ZN ZINC ION × 8 SPS SPARSOMYCIN × 1 MG MAGNESIUM ION × 8 OHX osmium (III) hexammine × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；277.15 K；Tris-acetate pH7.0, potassium thiocyanate, magnesium acetate, glycerol, spermidine, PEG 20000
Resolution 3.30 Å R-free 0.310
5DGV Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog Deposited 2015-08-28 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 79 PDB declaration: 81-MERIC
Chain q1 1–25（25 aa）
Not recorded ZN ZINC ION × 8 SPS SPARSOMYCIN × 1 MG MAGNESIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；277.15 K；Tris-acetate pH7.0, potassium thiocyanate, magnesium acetate, glycerol, spermidine, PEG 20000
Resolution 3.10 Å R-free 0.284
5DGV Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog Deposited 2015-08-28 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 75 PDB declaration: 81-MERIC
Chain Q1 1–25（25 aa）
Not recorded ZN ZINC ION × 8 SPS SPARSOMYCIN × 1 MG MAGNESIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；277.15 K；Tris-acetate pH7.0, potassium thiocyanate, magnesium acetate, glycerol, spermidine, PEG 20000
Resolution 3.10 Å R-free 0.284
5FCI Structure of the vacant uL3 W255C mutant 80S yeast ribosome Deposited 2015-12-15 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-meric
Chain Q1 1–25（25 aa）
Not recorded OHX osmium (III) hexammine × 874 MG MAGNESIUM ION × 994 ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；277.15 K；Tris-Acetate pH 7.0, KSCN, Mg-Acetate, Glycerol, Spermidine, PEG20000
Resolution 3.40 Å R-free 0.284
5FCI Structure of the vacant uL3 W255C mutant 80S yeast ribosome Deposited 2015-12-15 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 79 PDB declaration: 83-meric
Chain q1 1–25（25 aa）
Not recorded OHX osmium (III) hexammine × 561 MG MAGNESIUM ION × 626 ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；277.15 K；Tris-Acetate pH 7.0, KSCN, Mg-Acetate, Glycerol, Spermidine, PEG20000
Resolution 3.40 Å R-free 0.284
5FCJ Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome Deposited 2015-12-15 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 79 PDB declaration: 82-meric
Chain q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 517 OHX osmium (III) hexammine × 534 ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；277.15 K；Tris-Acetate pH7.0, KSCN, Mg-Acetate, Glycerol, Spermidine, PEG20000
Resolution 3.10 Å R-free 0.291
5FCJ Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome Deposited 2015-12-15 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-meric
Chain Q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 462 OHX osmium (III) hexammine × 500 ZN ZINC ION × 8 ANM ANISOMYCIN × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；277.15 K；Tris-Acetate pH7.0, KSCN, Mg-Acetate, Glycerol, Spermidine, PEG20000
Resolution 3.10 Å R-free 0.291
5GAK Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5A Deposited 2015-12-09 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 44 PDB declaration: 49-meric
Chain p 1–25（25 aa）
Not recorded 3HE 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；Details can be retrieved from EMD-3227
Resolution 3.88 Å
5I4L Crystal structure of Amicoumacin A bound to the yeast 80S ribosome Deposited 2016-02-12 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-meric
Chain Q1 1–25（25 aa）
Not recorded OHX osmium (III) hexammine × 481 MG MAGNESIUM ION × 493 ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.10 Å R-free 0.251
5I4L Crystal structure of Amicoumacin A bound to the yeast 80S ribosome Deposited 2016-02-12 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 79 PDB declaration: 83-meric
Chain q1 1–25（25 aa）
Not recorded OHX osmium (III) hexammine × 512 MG MAGNESIUM ION × 526 ZN ZINC ION × 8 UAM Amicoumacin A × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.10 Å R-free 0.251
5IT7 Structure of the Kluyveromyces lactis 80S ribosome in complex with the cricket paralysis virus IRES and eEF2 Deposited 2016-03-16 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Other combination Heteromer；Protein × 78 PDB declaration: 83-meric
Chain nn 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 80 ZN ZINC ION × 6 GCP PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER × 1 6EM (2S)-1-amino-N,N,N-trimethyl-1-oxobutan-2-aminium × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
5JUO Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit) Deposited 2016-05-10 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 78 PDB declaration: 83-meric
Chain SA 1–25（25 aa）
Not recorded GDP GUANOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 SO1 [1R-(1.ALPHA.,3A.BETA.,4.BETA.,4A.BETA.,7.BETA.,7A.ALPHA.,8A.BETA.)]8A-[(6-DEOXY-4-O-METHYL-BETA-D-ALTROPYRANOSYLOXY)METHYL]-4-FORMYL-4,4A,5,6,7,7A,8,8A-OCTAHYDRO-7-METHYL-3-(1-METHYLETHYL)-1,4-METHANO-S-INDACENE-3A(1H)-CARBOXYLIC ACID × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.00 Å
5JUP Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit) Deposited 2016-05-10 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 78 PDB declaration: 83-meric
Chain SA 1–25（25 aa）
Not recorded GDP GUANOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 SO1 [1R-(1.ALPHA.,3A.BETA.,4.BETA.,4A.BETA.,7.BETA.,7A.ALPHA.,8A.BETA.)]8A-[(6-DEOXY-4-O-METHYL-BETA-D-ALTROPYRANOSYLOXY)METHYL]-4-FORMYL-4,4A,5,6,7,7A,8,8A-OCTAHYDRO-7-METHYL-3-(1-METHYLETHYL)-1,4-METHANO-S-INDACENE-3A(1H)-CARBOXYLIC ACID × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å
5JUS Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure III (mid-rotated 40S subunit) Deposited 2016-05-10 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 78 PDB declaration: 83-meric
Chain SA 1–25（25 aa）
Not recorded GDP GUANOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 SO1 [1R-(1.ALPHA.,3A.BETA.,4.BETA.,4A.BETA.,7.BETA.,7A.ALPHA.,8A.BETA.)]8A-[(6-DEOXY-4-O-METHYL-BETA-D-ALTROPYRANOSYLOXY)METHYL]-4-FORMYL-4,4A,5,6,7,7A,8,8A-OCTAHYDRO-7-METHYL-3-(1-METHYLETHYL)-1,4-METHANO-S-INDACENE-3A(1H)-CARBOXYLIC ACID × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
Resolution 4.20 Å
5JUT Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit) Deposited 2016-05-10 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 78 PDB declaration: 83-meric
Chain SA 1–25（25 aa）
Not recorded GDP GUANOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 SO1 [1R-(1.ALPHA.,3A.BETA.,4.BETA.,4A.BETA.,7.BETA.,7A.ALPHA.,8A.BETA.)]8A-[(6-DEOXY-4-O-METHYL-BETA-D-ALTROPYRANOSYLOXY)METHYL]-4-FORMYL-4,4A,5,6,7,7A,8,8A-OCTAHYDRO-7-METHYL-3-(1-METHYLETHYL)-1,4-METHANO-S-INDACENE-3A(1H)-CARBOXYLIC ACID × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.00 Å
5JUU Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit) Deposited 2016-05-10 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 78 PDB declaration: 83-meric
Chain SA 1–25（25 aa）
Not recorded GDP GUANOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 SO1 [1R-(1.ALPHA.,3A.BETA.,4.BETA.,4A.BETA.,7.BETA.,7A.ALPHA.,8A.BETA.)]8A-[(6-DEOXY-4-O-METHYL-BETA-D-ALTROPYRANOSYLOXY)METHYL]-4-FORMYL-4,4A,5,6,7,7A,8,8A-OCTAHYDRO-7-METHYL-3-(1-METHYLETHYL)-1,4-METHANO-S-INDACENE-3A(1H)-CARBOXYLIC ACID × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.00 Å
5LYB Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn Deposited 2016-09-26 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 80-meric
Chain Q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 1026 OHX osmium (III) hexammine × 659 ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION；pH 7；277 K；Tris-Acetate pH 7.0, KSCN, MgOAc2, glycerol, spermidine, PEG20K
Resolution 3.25 Å R-free 0.249
5LYB Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn Deposited 2016-09-26 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 79 PDB declaration: 84-meric
Chain q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 1166 OHX osmium (III) hexammine × 686 ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION；pH 7；277 K；Tris-Acetate pH 7.0, KSCN, MgOAc2, glycerol, spermidine, PEG20K
Resolution 3.25 Å R-free 0.249
5MC6 Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiae Deposited 2016-11-09 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 87-meric
Chain AS 1–25（25 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.80 Å
5NDG Crystal structure of geneticin (G418) bound to the yeast 80S ribosome Deposited 2017-03-08 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-meric
Chain Q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 597 GET GENETICIN × 9 ZN ZINC ION × 9 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.70 Å R-free 0.253
5NDG Crystal structure of geneticin (G418) bound to the yeast 80S ribosome Deposited 2017-03-08 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 76 PDB declaration: 80-meric
Chain q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 624 GET GENETICIN × 12 ZN ZINC ION × 9 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.70 Å R-free 0.253
5NDW Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome Deposited 2017-03-09 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-meric
Chain q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 671 8UZ TC007 × 10 ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.70 Å R-free 0.235
5NDW Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome Deposited 2017-03-09 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-meric
Chain Q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 694 8UZ TC007 × 15 ZN ZINC ION × 9 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.70 Å R-free 0.235
5OBM Crystal structure of Gentamicin bound to the yeast 80S ribosome Deposited 2017-06-28 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-MERIC
Chain Q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 855 LLL (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL × 22 ZN ZINC ION × 9 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.40 Å R-free 0.238
5OBM Crystal structure of Gentamicin bound to the yeast 80S ribosome Deposited 2017-06-28 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 78 PDB declaration: 82-MERIC
Chain q1 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 1211 LLL (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL × 47 ZN ZINC ION × 9 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG 20K, KSCN, Mg Acetate, Tris-Acetate, Glycerol, Spermidine
Resolution 3.40 Å R-free 0.238
5TBW Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome Deposited 2016-09-13 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-meric
Chain AO 1–25（25 aa）
Not recorded OHX osmium (III) hexammine × 518 MG MAGNESIUM ION × 666 7AL Chlorolissoclimide × 1 ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；277.15 K；Tris-acetate pH7.0, potassium thiocyanate, magnesium acetate, glycerol, spermidine, PEG 20000
Resolution 3.00 Å R-free 0.227
5TBW Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome Deposited 2016-09-13 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 76 PDB declaration: 80-meric
Chain DP 1–25（25 aa）
Not recorded OHX osmium (III) hexammine × 556 MG MAGNESIUM ION × 728 7AL Chlorolissoclimide × 1 ZN ZINC ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；277.15 K；Tris-acetate pH7.0, potassium thiocyanate, magnesium acetate, glycerol, spermidine, PEG 20000
Resolution 3.00 Å R-free 0.227
5TGM Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro Deposited 2016-09-28 Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 154 PDB declaration: 164-meric
Chain Q1 1–25（25 aa）
Chain q1 1–25（25 aa）
Not recorded OHX osmium (III) hexammine × 1095 MG MAGNESIUM ION × 1191 ZN ZINC ION × 16 PHE PHENYLALANINE × 2 LEU LEUCINE × 2 SPS SPARSOMYCIN × 2 8AN 3'-amino-3'-deoxyadenosine 5'-(dihydrogen phosphate) × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG20000
Resolution 3.50 Å R-free 0.312
6FYX Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C1) Deposited 2018-03-12 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 44 PDB declaration: 47-meric
Chain h 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 5 MET METHIONINE × 1 GCP PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å
6FYY Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2) Deposited 2018-03-12 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 44 PDB declaration: 47-meric
Chain h 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 5 MET METHIONINE × 1 GCP PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.02 Å
6GSM Structure of a partial yeast 48S preinitiation complex in open conformation. Deposited 2018-06-14 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 44 PDB declaration: 47-meric
Chain h 1–25（25 aa）
Not recorded 7NO [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-2-(phosphonooxymethyl)oxolan-3-yl] (2~{S})-2-azanyl-4-methylsulfanyl-butanoate × 1 MG MAGNESIUM ION × 82 ZN ZINC ION × 4 GCP PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 5.15 Å
6GSN Structure of a partial yeast 48S preinitiation complex in closed conformation Deposited 2018-06-14 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 44 PDB declaration: 47-meric
Chain h 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 81 ZN ZINC ION × 4 GCP PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER × 1 MET METHIONINE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 5.75 Å
6Z6K Cryo-EM structure of yeast reconstituted Lso2 bound to 80S ribosomes Deposited 2020-05-28 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-meric
Chain Ln 1–25（25 aa）
Not recorded ZN ZINC ION × 9 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
7MPI Stm1 bound vacant 80S structure isolated from cbf5-D95A Deposited 2021-05-04 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-meric
Chain An 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 366 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.05 Å
7MPJ Stm1 bound vacant 80S structure isolated from wild-type Deposited 2021-05-04 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-meric
Chain An 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 745 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
7N8B Cycloheximide bound vacant 80S structure isolated from cbf5-D95A Deposited 2021-06-14 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-meric
Chain An 1–25（25 aa）
Not recorded 3HE 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione × 1 MG MAGNESIUM ION × 374 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.05 Å
7NRC Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A Deposited 2021-03-03 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 79 PDB declaration: 86-meric
Chain Lp 1–25（25 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE-PROPANE
Resolution 3.90 Å
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain Ln 1–25（25 aa）
Chain Lr 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Ln 1–25（25 aa）
Chain Lr 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7RR5 Structure of ribosomal complex bound with Rbg1/Tma46 Deposited 2021-08-09 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 87-meric
Chain Ln 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 286 ASP ASPARTIC ACID × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.23 Å
7TOO Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20 Deposited 2022-01-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 44 PDB declaration: 48-meric
Chain AL41 1–25（25 aa）
Not recorded ZN ZINC ION × 4 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
7TOP Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20 Deposited 2022-01-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 44 PDB declaration: 48-meric
Chain AL41 1–25（25 aa）
Not recorded ZN ZINC ION × 4 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.40 Å
7ZUX Collided ribosome in a disome unit from S. cerevisiae Deposited 2022-05-13 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Em 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 86 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.50 Å
7ZW0 FAP-80S Complex - Rotated state Deposited 2022-05-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 79 PDB declaration: 86-meric
Chain Lq 1–25（25 aa）
Chain Lt 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 324 SPD SPERMIDINE × 1 ZN ZINC ION × 34 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.40 Å
8AAF Yeast RQC complex in state G Deposited 2022-07-01 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 49 PDB declaration: 54-meric
Chain d 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 13 ZN ZINC ION × 7 SPD SPERMIDINE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.8
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.50 Å
8AGT Yeast RQC complex in state F Deposited 2022-07-20 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 49 PDB declaration: 54-meric
Chain d 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 13 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.8
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
8AGV Yeast RQC complex in state H Deposited 2022-07-20 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 49 PDB declaration: 54-meric
Chain d 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 13 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.8
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
8AGW Yeast RQC complex in state D Deposited 2022-07-20 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 48 PDB declaration: 53-meric
Chain d 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 13 ZN ZINC ION × 7 SPD SPERMIDINE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.8
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
8AGX Yeast RQC complex in state with the RING domain of Ltn1 in the IN position Deposited 2022-07-20 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 48 PDB declaration: 52-meric
Chain d 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 13 ZN ZINC ION × 7 SPD SPERMIDINE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.8
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.40 Å
8AGZ Yeast RQC complex in state with the RING domain of Ltn1 in the OUT position Deposited 2022-07-20 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 49 PDB declaration: 54-meric
Chain d 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 13 ZN ZINC ION × 7 SPD SPERMIDINE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.8
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
8BIP Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex Deposited 2022-11-02 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Assembly 1 Protein–RNA Heteromer；Protein × 44 PDB declaration: 47-meric
Chain Ln 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 206 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8BJQ Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex Deposited 2022-11-05 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 45 PDB declaration: 48-meric
Chain Ln 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 206 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.80 Å
8BQX Yeast 80S ribosome in complex with Map1 (conformation 2) Deposited 2022-11-21 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 80-meric
Chain AS 1–25（25 aa）
Not recorded ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.80 Å
8CAH Cryo-EM structure of native Otu2-bound ubiquitinated 43S pre-initiation complex Deposited 2023-01-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 48-meric
Chain n 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 80 ZN ZINC ION × 2 SF4 IRON/SULFUR CLUSTER × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8CAS Cryo-EM structure of native Otu2-bound ubiquitinated 48S initiation complex (partial) Deposited 2023-01-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain n 1–25（25 aa）
Not recorded ZN ZINC ION × 4 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 5 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 SF4 IRON/SULFUR CLUSTER × 2 MET METHIONINE × 1 GCP PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8CCS 80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complex Deposited 2023-01-27 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain Z 1–25（25 aa）
Not recorded ZN ZINC ION × 8 MG MAGNESIUM ION × 281 K POTASSIUM ION × 22 SPD SPERMIDINE × 4 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 1.97 Å
8CDL 80S S. cerevisiae ribosome with ligands in hybrid-2 pre-translocation (PRE-H2) complex Deposited 2023-01-31 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain Z 1–25（25 aa）
Not recorded ZN ZINC ION × 8 MG MAGNESIUM ION × 258 K POTASSIUM ION × 21 SPD SPERMIDINE × 4 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.72 Å
8CDR Translocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin Deposited 2023-01-31 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 84-meric
Chain Z 1–25（25 aa）
Not recorded ZN ZINC ION × 8 MG MAGNESIUM ION × 267 SPD SPERMIDINE × 4 K POTASSIUM ION × 21 GDP GUANOSINE-5'-DIPHOSPHATE × 1 SO1 [1R-(1.ALPHA.,3A.BETA.,4.BETA.,4A.BETA.,7.BETA.,7A.ALPHA.,8A.BETA.)]8A-[(6-DEOXY-4-O-METHYL-BETA-D-ALTROPYRANOSYLOXY)METHYL]-4-FORMYL-4,4A,5,6,7,7A,8,8A-OCTAHYDRO-7-METHYL-3-(1-METHYLETHYL)-1,4-METHANO-S-INDACENE-3A(1H)-CARBOXYLIC ACID × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.04 Å
8EUB Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure I Deposited 2022-10-18 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 82-meric
Chain An 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 255 ZN ZINC ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.52 Å
8EVP Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure I Deposited 2022-10-20 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 80-meric
Chain An 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 256 ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
8EVQ Hypopseudouridylated Ribosome bound with TSV IRES, eEF2, GDP, and sordarin, Structure I Deposited 2022-10-20 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 82-meric
Chain An 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 241 ZN ZINC ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 SO1 [1R-(1.ALPHA.,3A.BETA.,4.BETA.,4A.BETA.,7.BETA.,7A.ALPHA.,8A.BETA.)]8A-[(6-DEOXY-4-O-METHYL-BETA-D-ALTROPYRANOSYLOXY)METHYL]-4-FORMYL-4,4A,5,6,7,7A,8,8A-OCTAHYDRO-7-METHYL-3-(1-METHYLETHYL)-1,4-METHANO-S-INDACENE-3A(1H)-CARBOXYLIC ACID × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.72 Å
8EVR Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II Deposited 2022-10-20 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 82-meric
Chain An 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 217 ZN ZINC ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 W9C (1S,3S,3aR,4S,4aR,7R,7aR,8aS)-8a-{[(6-deoxy-4-O-methyl-alpha-D-altropyranosyl)oxy]methyl}-4-formyl-7-methyl-3-(propan-2-yl)decahydro-1,4-methano-s-indacene-3a(1H)-carboxylate × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.87 Å
8EVS Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure II Deposited 2022-10-20 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 82-meric
Chain An 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 254 ZN ZINC ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.62 Å
8EVT Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) refined against a composite map Deposited 2022-10-20 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 80-meric
Chain An 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 272 ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.20 Å
8EWB Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure III Deposited 2022-10-22 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 82-meric
Chain An 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 242 ZN ZINC ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.87 Å
8EWC Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure II Deposited 2022-10-22 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 80-meric
Chain An 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.45 Å
8I7J Yeast 40S-eIF4B - partially open conformation of the 40S head Deposited 2023-01-31 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 34 PDB declaration: 35-meric
Chain h 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 2 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4；20 mM HEPES pH7.4, 100 mM potassium acetate pH7.6, 2.5 mM Magnesium acetate, 2 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE；Vitrification was carried out in nitrogen atmosphere.
Resolution 4.60 Å
8K2D Cryo-EM structure of the yeast 80S ribosome with tigecycline, eEF2, Stm1 and eIF5A Deposited 2023-07-12 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain Ln 1–25（25 aa）
Not recorded ZN ZINC ION × 9 T1C TIGECYCLINE × 6 MG MAGNESIUM ION × 4 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
8K82 Cryo-EM structure of the yeast 80S ribosome with tigecycline, Not5 and P-site tRNA Deposited 2023-07-28 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 79 PDB declaration: 85-meric
Chain L2 1–25（25 aa）
Chain Ln 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 316 T1C TIGECYCLINE × 6 SPD SPERMIDINE × 1 ZN ZINC ION × 9 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
8P4V 80S yeast ribosome in complex with HaterumaimideQ Deposited 2023-05-23 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 79-meric
Chain AO 1–25（25 aa）
Not recorded OHX osmium (III) hexammine × 461 MG MAGNESIUM ION × 711 K POTASSIUM ION × 2 SPD SPERMIDINE × 1 X1K (3~{R})-3-[(1~{S})-2-[(1~{R},3~{S},4~{a}~{S},8~{a}~{S})-5,5,8~{a}-trimethyl-2-methylidene-3-oxidanyl-3,4,4~{a},6,7,8-hexahydro-1~{H}-naphthalen-1-yl]-1-oxidanyl-ethyl]pyrrolidine-2,5-dione × 1 ZN ZINC ION × 8 OS OSMIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；277.15 K；ll lissoclimides/80S complexes were formed in 5.5 mM Tris-acetate at pH 7.0, 3 mM K(OAc) at pH 7.2, 5.5 mM NH4(OAc), 2 mM Mg(OAc)2, 1.3 mM DTT by incubation of 80S ribosomes (1.5 uM) with 30-fold molar excess of lissoclimide congeners for 15 min at 30 C. Crystals were grown at 4 C by hanging-drop vapor diffusion
Resolution 3.16 Å R-free 0.251
8P4V 80S yeast ribosome in complex with HaterumaimideQ Deposited 2023-05-23 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Protein–RNA Heteromer；Protein × 76 PDB declaration: 80-meric
Chain DP 1–25（25 aa）
Not recorded OHX osmium (III) hexammine × 492 MG MAGNESIUM ION × 766 K POTASSIUM ION × 5 SPD SPERMIDINE × 1 X1K (3~{R})-3-[(1~{S})-2-[(1~{R},3~{S},4~{a}~{S},8~{a}~{S})-5,5,8~{a}-trimethyl-2-methylidene-3-oxidanyl-3,4,4~{a},6,7,8-hexahydro-1~{H}-naphthalen-1-yl]-1-oxidanyl-ethyl]pyrrolidine-2,5-dione × 1 ZN ZINC ION × 7 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；277.15 K；ll lissoclimides/80S complexes were formed in 5.5 mM Tris-acetate at pH 7.0, 3 mM K(OAc) at pH 7.2, 5.5 mM NH4(OAc), 2 mM Mg(OAc)2, 1.3 mM DTT by incubation of 80S ribosomes (1.5 uM) with 30-fold molar excess of lissoclimide congeners for 15 min at 30 C. Crystals were grown at 4 C by hanging-drop vapor diffusion
Resolution 3.16 Å R-free 0.251
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain Lr 1–25（25 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8S8K Structure of a yeast 48S-AUC preinitiation complex in swivelled conformation (model py48S-AUC-swiv-eIF1) Deposited 2024-03-06 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 40 PDB declaration: 43-meric
Chain h 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 96 ZN ZINC ION × 4 GCP PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER × 1 MET METHIONINE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.00 Å
8T2X Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, A-site tRNA, messenger RNA and eIF5A, PRE Deposited 2023-06-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain An 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 181 K POTASSIUM ION × 23 SPD SPERMIDINE × 1 3HE 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione × 1 ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.46 Å
8T2Y Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, PRE Deposited 2023-06-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain An 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 197 SPD SPERMIDINE × 1 3HE 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione × 1 ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.20 Å
8T2Z Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, POST Deposited 2023-06-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain An 1–25（25 aa）
Not recorded SPD SPERMIDINE × 1 3HE 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione × 1 ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.40 Å
8T30 Hypomethylated yeast 80S bound with cycloheximide, unmodified U2921, mid rotated Deposited 2023-06-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 78-meric
Chain An 1–25（25 aa）
Not recorded SPD SPERMIDINE × 1 3HE 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione × 1 ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.88 Å
8T3A Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, sordarin, and hibernating factor Los2 Deposited 2023-06-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 82-meric
Chain An 1–25（25 aa）
Not recorded ZN ZINC ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 SO1 [1R-(1.ALPHA.,3A.BETA.,4.BETA.,4A.BETA.,7.BETA.,7A.ALPHA.,8A.BETA.)]8A-[(6-DEOXY-4-O-METHYL-BETA-D-ALTROPYRANOSYLOXY)METHYL]-4-FORMYL-4,4A,5,6,7,7A,8,8A-OCTAHYDRO-7-METHYL-3-(1-METHYLETHYL)-1,4-METHANO-S-INDACENE-3A(1H)-CARBOXYLIC ACID × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8T3B Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure I Deposited 2023-06-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 81-meric
Chain An 1–25（25 aa）
Not recorded ZN ZINC ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 SO1 [1R-(1.ALPHA.,3A.BETA.,4.BETA.,4A.BETA.,7.BETA.,7A.ALPHA.,8A.BETA.)]8A-[(6-DEOXY-4-O-METHYL-BETA-D-ALTROPYRANOSYLOXY)METHYL]-4-FORMYL-4,4A,5,6,7,7A,8,8A-OCTAHYDRO-7-METHYL-3-(1-METHYLETHYL)-1,4-METHANO-S-INDACENE-3A(1H)-CARBOXYLIC ACID × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.08 Å
8T3C Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II Deposited 2023-06-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 81-meric
Chain An 1–25（25 aa）
Not recorded ZN ZINC ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 SO1 [1R-(1.ALPHA.,3A.BETA.,4.BETA.,4A.BETA.,7.BETA.,7A.ALPHA.,8A.BETA.)]8A-[(6-DEOXY-4-O-METHYL-BETA-D-ALTROPYRANOSYLOXY)METHYL]-4-FORMYL-4,4A,5,6,7,7A,8,8A-OCTAHYDRO-7-METHYL-3-(1-METHYLETHYL)-1,4-METHANO-S-INDACENE-3A(1H)-CARBOXYLIC ACID × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.86 Å
8T3D Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure III Deposited 2023-06-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 81-meric
Chain An 1–25（25 aa）
Not recorded ZN ZINC ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 SO1 [1R-(1.ALPHA.,3A.BETA.,4.BETA.,4A.BETA.,7.BETA.,7A.ALPHA.,8A.BETA.)]8A-[(6-DEOXY-4-O-METHYL-BETA-D-ALTROPYRANOSYLOXY)METHYL]-4-FORMYL-4,4A,5,6,7,7A,8,8A-OCTAHYDRO-7-METHYL-3-(1-METHYLETHYL)-1,4-METHANO-S-INDACENE-3A(1H)-CARBOXYLIC ACID × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.95 Å
8T3E Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure IV Deposited 2023-06-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 81-meric
Chain An 1–25（25 aa）
Not recorded ZN ZINC ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 SO1 [1R-(1.ALPHA.,3A.BETA.,4.BETA.,4A.BETA.,7.BETA.,7A.ALPHA.,8A.BETA.)]8A-[(6-DEOXY-4-O-METHYL-BETA-D-ALTROPYRANOSYLOXY)METHYL]-4-FORMYL-4,4A,5,6,7,7A,8,8A-OCTAHYDRO-7-METHYL-3-(1-METHYLETHYL)-1,4-METHANO-S-INDACENE-3A(1H)-CARBOXYLIC ACID × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.04 Å
8T3F Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure V Deposited 2023-06-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 81-meric
Chain An 1–25（25 aa）
Not recorded ZN ZINC ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 SO1 [1R-(1.ALPHA.,3A.BETA.,4.BETA.,4A.BETA.,7.BETA.,7A.ALPHA.,8A.BETA.)]8A-[(6-DEOXY-4-O-METHYL-BETA-D-ALTROPYRANOSYLOXY)METHYL]-4-FORMYL-4,4A,5,6,7,7A,8,8A-OCTAHYDRO-7-METHYL-3-(1-METHYLETHYL)-1,4-METHANO-S-INDACENE-3A(1H)-CARBOXYLIC ACID × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
8UT0 Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA Deposited 2023-10-30 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 84-meric
Chain Lp 1–25（25 aa）
Not recorded 3HE 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.22 Å
8UTI Eukaryotic 80S ribosome with Reh1 and A/P site tRNA Deposited 2023-10-31 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Lp 1–25（25 aa）
Not recorded 3HE 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.13 Å
8XU8 State 2c(S2c) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transferation Deposited 2024-01-12 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 81-meric
Chain p 1–25（25 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 4.5；YPD
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
8Y0U dormant ribosome with STM1 Deposited 2024-01-23 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 77-meric
Chain Ln 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 281 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4；50mM HEPES, pH7.5, 100mM KOAc, 5mM Mg(OAc)2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.59 Å
8YLD State 4a (S4a) of yeast 80S ribosome bound to 2 tRNAs and open eEF3 and eEF2 during translocation Deposited 2024-03-06 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 82-meric
Chain p 1–25（25 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 4.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.90 Å
8YLR State 6 (S6) of yeast 80S ribosome bound to 2 tRNAs and eEF2 and eEF3 during tranlocation Deposited 2024-03-06 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 82-meric
Chain p 1–25（25 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 4.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.90 Å
8Z70 State 1 (S1) of yeast 80S ribosome bound to 2 tRNAs during mRNA decoding Deposited 2024-04-19 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 81-meric
Chain p 1–25（25 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 4.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
8Z71 State 1a (S1a) of yeast 80S ribosome bound to open eEF3 and 2 tRNAs and eEF1A during mRNA decoding Deposited 2024-04-19 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 82-meric
Chain p 1–25（25 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 4.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
8ZGR 80S ribosome with A/A tRNA and mRNA of WNV Deposited 2024-05-09 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 79-meric
Chain Lp 1–25（25 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8ZGY 80S ribosome with P/E tRNA and mRNA of WNV Deposited 2024-05-10 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Lp 1–25（25 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8ZH3 80S ribosome with A/P-P/E tRNA and mRNA of WNV Deposited 2024-05-10 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lp 1–25（25 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8ZHB 80S ribosome with A/A P/E tRNA and mRNA of WNV Deposited 2024-05-10 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lp 1–25（25 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
8ZHC pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV Deposited 2024-05-10 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 82-meric
Chain Lp 1–25（25 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.30 Å
9DOV Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) and hygromycin B Deposited 2024-09-19 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 80-meric
Chain An 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 257 HYG HYGROMYCIN B × 1 ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.49 Å
9DP7 Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) and hygromycin B, Class II Deposited 2024-09-20 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 80-meric
Chain An 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 247 HYG HYGROMYCIN B × 1 ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9F9S Yeast SDD1 Disome with Mbf1 Deposited 2024-05-08 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 152 PDB declaration: 164-meric
Chain Ld 1–25（25 aa）
Chain Md 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 295 ZN ZINC ION × 13 K POTASSIUM ION × 16 SPD SPERMIDINE × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain Ln 1–25（25 aa）
Chain Lr 1–25（25 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain Ln 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å
9OFV Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex Deposited 2025-04-30 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 59 PDB declaration: 64-meric
Chain d 1–25（25 aa）
Not recorded ATP ADENOSINE-5'-TRIPHOSPHATE × 9 ADP ADENOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 7 MG MAGNESIUM ION × 12 SPD SPERMIDINE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.16 Å
9PN5 Composite map of hypomethylated 80S ribosome treated with hygromycin B Deposited 2025-07-19 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 78-meric
Chain An 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 174 K POTASSIUM ION × 27 ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 1.75 Å

119 other PDB entries and 146 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL41A_YEAST
Isoform —
PDB entities 47
Chains and sequence ranges Author chain Ln； PDBConstruct 1–25； UniProt 1–25 Author chain Lr； PDBConstruct 1–25； UniProt 1–25

60S ribosomal protein L44-like protein

OrganismNot specified

UniProt G0SBZ6

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain Lo； UniProt 1–106 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain Lo 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Lo 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Lo 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Lo 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain Lo 1–106（106 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain Lo 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

6 other PDB entries and 6 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SBZ6_CHATD
Isoform —
PDB entities 48
Chains and sequence ranges Author chain Lo； PDBConstruct 1–106； UniProt 1–106

60S ribosomal protein L43-like protein

OrganismNot specified

UniProt G0S6B0

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain Lp； UniProt 1–92 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain Lp 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Lp 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Lp 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Lp 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain Lp 1–92（92 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Lp 1–92（92 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain Lp 1–92（92 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Lp 1–92（92 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain Lp 1–92（92 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain Lp 1–92（92 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain Lp 1–92（92 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Lp 1–92（92 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain Lp 1–92（92 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain Lp 1–92（92 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain Lp 1–92（92 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain Lp 1–92（92 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain Lp 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

17 other PDB entries and 17 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S6B0_CHATD
Isoform —
PDB entities 49
Chains and sequence ranges Author chain Lp； PDBConstruct 1–92； UniProt 1–92

Putative 60S ribosomal protein

OrganismNot specified

UniProt G0SHJ6

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain Lq； UniProt 1–147 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain Lq 1–147（147 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Lq 1–147（147 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Lq 1–147（147 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Lq 1–147（147 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
8I9W Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 52-meric
Chain CV 1–147（147 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9X Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain CV 1–147（147 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8I9Y Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain CV 1–147（147 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
8I9Z Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 58 PDB declaration: 60-meric
Chain CV 1–147（147 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8IA0 Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 Deposited 2023-02-07 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 64-meric
Chain CV 1–147（147 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
8PV1 Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Lq 1–147（147 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.56 Å
8PV2 Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 57-meric
Chain Lq 1–147（147 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8PV3 Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Lq 1–147（147 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
8PV4 Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 62 PDB declaration: 66-meric
Chain Lq 1–147（147 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
8PV5 Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain Lq 1–147（147 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.86 Å
8PV6 Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 60 PDB declaration: 64-meric
Chain Lq 1–147（147 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å
8PV7 Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 59-meric
Chain Lq 1–147（147 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.12 Å
8PV8 Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 60-meric
Chain Lq 1–147（147 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.91 Å
8PVK Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 56 PDB declaration: 60-meric
Chain Lq 1–147（147 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.55 Å
8PVL Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure Deposited 2023-07-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 54 PDB declaration: 58-meric
Chain Lq 1–147（147 aa）
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 3 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.19 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain Lq 1–147（147 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å
9I78 Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon Deposited 2025-01-31 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 50-meric
Chain Lq 1–147（147 aa）
Not recorded MG MAGNESIUM ION × 379 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE；waiting time: 15 s blot force: 0
Resolution 2.20 Å

21 other PDB entries and 21 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SHJ6_CHATD
Isoform —
PDB entities 50
Chains and sequence ranges Author chain Lq； PDBConstruct 1–147； UniProt 1–147

60S acidic ribosomal protein P0

OrganismNot specified

UniProt G0SGP3

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain Ls； UniProt 1–312 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain Ls 1–312（312 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Ls 1–312（312 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Ls 1–312（312 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Ls 1–312（312 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å
9I1W High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum Deposited 2025-01-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 47 PDB declaration: 51-meric
Chain Ls 1–312（312 aa）
Not recorded SPD SPERMIDINE × 2 SPM SPERMINE × 2 MG MAGNESIUM ION × 239 K POTASSIUM ION × 188 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.38 Å

5 other PDB entries and 5 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SGP3_CHATD
Isoform —
PDB entities 51
Chains and sequence ranges Author chain Ls； PDBConstruct 1–312； UniProt 1–312

40S ribosomal protein S0

OrganismNot specified

UniProt G0RYF9

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SA； UniProt 1–285 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SA 1–285（285 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SA 1–285（285 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SA 1–285（285 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SA 1–285（285 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

4 other PDB entries and 4 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0RYF9_CHATD
Isoform —
PDB entities 52
Chains and sequence ranges Author chain SA； PDBConstruct 1–285； UniProt 1–285

40S ribosomal protein S1

OrganismNot specified

UniProt G0S7T8

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SB； UniProt 1–255 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
5OQL Cryo-EM structure of the 90S pre-ribosome from Chaetomium thermophilum Deposited 2017-08-12 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 55-meric
Chain l 1–255（255 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
6RXT Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state A Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 57-meric
Chain Ca 1–255（255 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.00 Å
6RXU Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 64 PDB declaration: 66-meric
Chain Ca 1–255（255 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å
6RXV Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B2 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Ca 1–255（255 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.00 Å
6RXX Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state C, Poly-Ala Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Ca 1–255（255 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.10 Å
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SB 1–255（255 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SB 1–255（255 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SB 1–255（255 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SB 1–255（255 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

9 other PDB entries and 9 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S7T8_CHATD
Isoform —
PDB entities 53
Chains and sequence ranges Author chain SB； PDBConstruct 1–255； UniProt 1–255

40S ribosomal protein S2-like protein

OrganismNot specified

UniProt G0SAV4

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SC； UniProt 1–263 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SC 1–263（263 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SC 1–263（263 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SC 1–263（263 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SC 1–263（263 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

4 other PDB entries and 4 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SAV4_CHATD
Isoform —
PDB entities 54
Chains and sequence ranges Author chain SC； PDBConstruct 1–263； UniProt 1–263

40S ribosomal protein S3-like protein

OrganismNot specified

UniProt G0S6I7

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SD； UniProt 1–254 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SD 1–254（254 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SD 1–254（254 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SD 1–254（254 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SD 1–254（254 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

4 other PDB entries and 4 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S6I7_CHATD
Isoform —
PDB entities 55
Chains and sequence ranges Author chain SD； PDBConstruct 1–254； UniProt 1–254

40S ribosomal protein S4

OrganismNot specified

UniProt G0S1A6

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SE； UniProt 1–264 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
5OQL Cryo-EM structure of the 90S pre-ribosome from Chaetomium thermophilum Deposited 2017-08-12 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 55-meric
Chain m 1–264（264 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
6RXU Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 64 PDB declaration: 66-meric
Chain Cb 1–264（264 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å
6RXV Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B2 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cb 1–264（264 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.00 Å
6RXX Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state C, Poly-Ala Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cb 1–264（264 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.10 Å
6RXZ Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state b Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cb 1–264（264 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.40 Å
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SE 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SE 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SE 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SE 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

9 other PDB entries and 9 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S1A6_CHATD
Isoform —
PDB entities 56
Chains and sequence ranges Author chain SE； PDBConstruct 1–264； UniProt 1–264

40S ribosomal protein s5-like protein

OrganismNot specified

UniProt G0S1Z0

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SF； UniProt 1–212 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
5OQL Cryo-EM structure of the 90S pre-ribosome from Chaetomium thermophilum Deposited 2017-08-12 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 55-meric
Chain n 1–212（212 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
6RXT Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state A Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 57-meric
Chain Cc 1–212（212 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.00 Å
6RXU Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 64 PDB declaration: 66-meric
Chain Cc 1–212（212 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å
6RXV Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B2 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cc 1–212（212 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.00 Å
6RXX Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state C, Poly-Ala Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cc 1–212（212 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.10 Å
6RXY Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state a Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain Cc 1–212（212 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.70 Å
6RXZ Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state b Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cc 1–212（212 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.40 Å
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SF 1–212（212 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SF 1–212（212 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SF 1–212（212 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SF 1–212（212 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

11 other PDB entries and 11 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S1Z0_CHATD
Isoform —
PDB entities 57
Chains and sequence ranges Author chain SF； PDBConstruct 1–212； UniProt 1–212

40S ribosomal protein S6

OrganismNot specified

UniProt G0RY43

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SG； UniProt 1–239 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
5OQL Cryo-EM structure of the 90S pre-ribosome from Chaetomium thermophilum Deposited 2017-08-12 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 55-meric
Chain o 1–239（239 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
6RXU Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 64 PDB declaration: 66-meric
Chain Cd 1–239（239 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å
6RXV Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B2 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cd 1–239（239 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.00 Å
6RXX Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state C, Poly-Ala Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cd 1–239（239 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.10 Å
6RXZ Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state b Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cd 1–239（239 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.40 Å
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SG 1–239（239 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SG 1–239（239 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SG 1–239（239 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SG 1–239（239 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

9 other PDB entries and 9 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0RY43_CHATD
Isoform —
PDB entities 58
Chains and sequence ranges Author chain SG； PDBConstruct 1–239； UniProt 1–239

40S ribosomal protein S7

OrganismNot specified

UniProt G0S8C4

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SH； UniProt 1–203 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
5OQL Cryo-EM structure of the 90S pre-ribosome from Chaetomium thermophilum Deposited 2017-08-12 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 55-meric
Chain p 1–203（203 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
6RXT Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state A Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 57-meric
Chain Ce 1–203（203 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.00 Å
6RXU Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 64 PDB declaration: 66-meric
Chain Ce 1–203（203 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å
6RXV Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B2 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Ce 1–203（203 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.00 Å
6RXX Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state C, Poly-Ala Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Ce 1–203（203 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.10 Å
6RXY Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state a Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain Ce 1–203（203 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.70 Å
6RXZ Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state b Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Ce 1–203（203 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.40 Å
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SH 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SH 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SH 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SH 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

11 other PDB entries and 11 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S8C4_CHATD
Isoform —
PDB entities 59
Chains and sequence ranges Author chain SH； PDBConstruct 1–203； UniProt 1–203

40S ribosomal protein S8

OrganismNot specified

UniProt G0RY45

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SI； UniProt 1–202 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
5OQL Cryo-EM structure of the 90S pre-ribosome from Chaetomium thermophilum Deposited 2017-08-12 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 55-meric
Chain q 1–202（202 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
6RXU Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 64 PDB declaration: 66-meric
Chain Cf 1–202（202 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å
6RXV Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B2 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cf 1–202（202 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.00 Å
6RXX Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state C, Poly-Ala Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cf 1–202（202 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.10 Å
6RXZ Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state b Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cf 1–202（202 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.40 Å
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SI 1–202（202 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SI 1–202（202 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SI 1–202（202 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SI 1–202（202 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

9 other PDB entries and 9 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0RY45_CHATD
Isoform —
PDB entities 60
Chains and sequence ranges Author chain SI； PDBConstruct 1–202； UniProt 1–202

40S ribosomal protein s9-like protein

OrganismNot specified

UniProt G0S0Z4

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SJ； UniProt 1–190 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
5OQL Cryo-EM structure of the 90S pre-ribosome from Chaetomium thermophilum Deposited 2017-08-12 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 55-meric
Chain r 1–190（190 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
6RXT Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state A Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 57-meric
Chain Cg 1–190（190 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.00 Å
6RXU Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 64 PDB declaration: 66-meric
Chain Cg 1–190（190 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å
6RXV Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B2 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cg 1–190（190 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.00 Å
6RXX Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state C, Poly-Ala Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cg 1–190（190 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.10 Å
6RXY Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state a Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain Cg 1–190（190 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.70 Å
6RXZ Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state b Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cg 1–190（190 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.40 Å
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SJ 1–190（190 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SJ 1–190（190 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SJ 1–190（190 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SJ 1–190（190 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

11 other PDB entries and 11 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S0Z4_CHATD
Isoform —
PDB entities 61
Chains and sequence ranges Author chain SJ； PDBConstruct 1–190； UniProt 1–190

40S ribosomal protein s10-like protein

OrganismNot specified

UniProt G0RZD8

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SK； UniProt 1–159 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SK 1–159（159 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SK 1–159（159 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SK 1–159（159 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SK 1–159（159 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

4 other PDB entries and 4 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0RZD8_CHATD
Isoform —
PDB entities 62
Chains and sequence ranges Author chain SK； PDBConstruct 1–159； UniProt 1–159

40S ribosomal protein S11-like protein

OrganismNot specified

UniProt G0SF00

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SL； UniProt 1–161 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
5OQL Cryo-EM structure of the 90S pre-ribosome from Chaetomium thermophilum Deposited 2017-08-12 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 55-meric
Chain v 1–161（161 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
6RXU Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 64 PDB declaration: 66-meric
Chain Ck 1–161（161 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å
6RXV Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B2 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Ck 1–161（161 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.00 Å
6RXX Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state C, Poly-Ala Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Ck 1–161（161 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.10 Å
6RXZ Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state b Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Ck 1–161（161 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.40 Å
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SL 1–161（161 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SL 1–161（161 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SL 1–161（161 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SL 1–161（161 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

9 other PDB entries and 9 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SF00_CHATD
Isoform —
PDB entities 63
Chains and sequence ranges Author chain SL； PDBConstruct 1–161； UniProt 1–161

40S ribosomal protein S12

OrganismNot specified

UniProt G0SHH9

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SM； UniProt 1–144 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SM 1–144（144 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SM 1–144（144 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SM 1–144（144 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SM 1–144（144 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

4 other PDB entries and 4 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SHH9_CHATD
Isoform —
PDB entities 64
Chains and sequence ranges Author chain SM； PDBConstruct 1–144； UniProt 1–144

40S ribosomal protein S13-like protein

OrganismNot specified

UniProt G0RZM9

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SN； UniProt 1–151 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
5OQL Cryo-EM structure of the 90S pre-ribosome from Chaetomium thermophilum Deposited 2017-08-12 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 55-meric
Chain s 1–151（151 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
6RXT Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state A Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 57-meric
Chain Ch 1–151（151 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.00 Å
6RXU Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 64 PDB declaration: 66-meric
Chain Ch 1–151（151 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å
6RXV Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B2 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Ch 1–151（151 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.00 Å
6RXX Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state C, Poly-Ala Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Ch 1–151（151 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.10 Å
6RXY Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state a Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain Ch 1–151（151 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.70 Å
6RXZ Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state b Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Ch 1–151（151 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.40 Å
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SN 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SN 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SN 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SN 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

11 other PDB entries and 11 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0RZM9_CHATD
Isoform —
PDB entities 65
Chains and sequence ranges Author chain SN； PDBConstruct 1–151； UniProt 1–151

40S ribosomal protein S14-like protein

OrganismNot specified

UniProt G0SFL1

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SO； UniProt 1–150 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
5OQL Cryo-EM structure of the 90S pre-ribosome from Chaetomium thermophilum Deposited 2017-08-12 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 55-meric
Chain t 1–150（150 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
6RXT Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state A Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 57-meric
Chain Ci 1–150（150 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.00 Å
6RXU Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 64 PDB declaration: 66-meric
Chain Ci 1–150（150 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å
6RXV Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B2 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Ci 1–150（150 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.00 Å
6RXX Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state C, Poly-Ala Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Ci 1–150（150 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.10 Å
6RXY Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state a Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain Ci 1–150（150 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.70 Å
6RXZ Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state b Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Ci 1–150（150 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.40 Å
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SO 1–150（150 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SO 1–150（150 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SO 1–150（150 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SO 1–150（150 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

11 other PDB entries and 11 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SFL1_CHATD
Isoform —
PDB entities 66
Chains and sequence ranges Author chain SO； PDBConstruct 1–150； UniProt 1–150

40S ribosomal protein s15-like protein

OrganismNot specified

UniProt G0S084

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SP； UniProt 1–153 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SP 1–153（153 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SP 1–153（153 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SP 1–153（153 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SP 1–153（153 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

4 other PDB entries and 4 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S084_CHATD
Isoform —
PDB entities 67
Chains and sequence ranges Author chain SP； PDBConstruct 1–153； UniProt 1–153

40S ribosomal protein S16-like protein

OrganismNot specified

UniProt G0SBR7

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SQ； UniProt 1–143 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
5OQL Cryo-EM structure of the 90S pre-ribosome from Chaetomium thermophilum Deposited 2017-08-12 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 55-meric
Chain u 1–143（143 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
6RXT Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state A Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 57-meric
Chain Cj 1–143（143 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.00 Å
6RXU Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 64 PDB declaration: 66-meric
Chain Cj 1–143（143 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å
6RXV Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B2 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cj 1–143（143 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.00 Å
6RXX Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state C, Poly-Ala Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cj 1–143（143 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.10 Å
6RXY Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state a Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain Cj 1–143（143 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.70 Å
6RXZ Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state b Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cj 1–143（143 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.40 Å
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SQ 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SQ 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SQ 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SQ 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

11 other PDB entries and 11 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SBR7_CHATD
Isoform —
PDB entities 68
Chains and sequence ranges Author chain SQ； PDBConstruct 1–143； UniProt 1–143

40S ribosomal protein S17-like protein

OrganismNot specified

UniProt G0S871

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SR； UniProt 1–143 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SR 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SR 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SR 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SR 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

4 other PDB entries and 4 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S871_CHATD
Isoform —
PDB entities 69
Chains and sequence ranges Author chain SR； PDBConstruct 1–143； UniProt 1–143

Putative ribosomal protein

OrganismNot specified

UniProt G0S6J7

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SS； UniProt 1–156 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6RXT Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state A Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 57-meric
Chain Cl 1–156（156 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.00 Å
6RXU Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 64 PDB declaration: 66-meric
Chain Cl 1–156（156 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å
6RXV Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B2 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cl 1–156（156 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.00 Å
6RXX Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state C, Poly-Ala Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cl 1–156（156 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.10 Å
6RXY Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state a Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain Cl 1–156（156 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.70 Å
6RXZ Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state b Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cl 1–156（156 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.40 Å
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SS 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SS 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SS 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SS 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

10 other PDB entries and 10 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S6J7_CHATD
Isoform —
PDB entities 70
Chains and sequence ranges Author chain SS； PDBConstruct 1–156； UniProt 1–156

40S ribosomal protein S19-like protein

OrganismNot specified

UniProt G0SFK8

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain ST； UniProt 1–153 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6RXX Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state C, Poly-Ala Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cr 1–153（153 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.10 Å
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain ST 1–153（153 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain ST 1–153（153 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain ST 1–153（153 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain ST 1–153（153 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

5 other PDB entries and 5 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SFK8_CHATD
Isoform —
PDB entities 71
Chains and sequence ranges Author chain ST； PDBConstruct 1–153； UniProt 1–153

40S ribosomal protein S20-like protein

OrganismNot specified

UniProt G0S379

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SU； UniProt 1–116 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SU 1–116（116 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SU 1–116（116 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SU 1–116（116 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SU 1–116（116 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

4 other PDB entries and 4 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S379_CHATD
Isoform —
PDB entities 72
Chains and sequence ranges Author chain SU； PDBConstruct 1–116； UniProt 1–116

40S ribosomal protein S21-like protein

OrganismNot specified

UniProt G0SI21

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SV； UniProt 1–98 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SV 1–98（98 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SV 1–98（98 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SV 1–98（98 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SV 1–98（98 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

4 other PDB entries and 4 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SI21_CHATD
Isoform —
PDB entities 73
Chains and sequence ranges Author chain SV； PDBConstruct 1–98； UniProt 1–98

40S ribosomal protein S22-like protein

OrganismNot specified

UniProt G0SHI0

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SW； UniProt 1–130 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
5OQL Cryo-EM structure of the 90S pre-ribosome from Chaetomium thermophilum Deposited 2017-08-12 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 55-meric
Chain w 1–130（130 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
6RXT Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state A Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 57-meric
Chain Cm 1–130（130 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.00 Å
6RXU Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 64 PDB declaration: 66-meric
Chain Cm 1–130（130 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å
6RXV Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B2 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cm 1–130（130 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.00 Å
6RXX Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state C, Poly-Ala Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cm 1–130（130 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.10 Å
6RXY Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state a Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain Cm 1–130（130 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.70 Å
6RXZ Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state b Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cm 1–130（130 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.40 Å
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SW 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SW 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SW 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SW 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

11 other PDB entries and 11 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SHI0_CHATD
Isoform —
PDB entities 74
Chains and sequence ranges Author chain SW； PDBConstruct 1–130； UniProt 1–130

40S ribosomal protein s23-like protein

OrganismNot specified

UniProt G0RY17

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SX； UniProt 1–145 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
5OQL Cryo-EM structure of the 90S pre-ribosome from Chaetomium thermophilum Deposited 2017-08-12 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 55-meric
Chain x 1–145（145 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
6RXT Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state A Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 57-meric
Chain Cn 1–145（145 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.00 Å
6RXU Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 64 PDB declaration: 66-meric
Chain Cn 1–145（145 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å
6RXV Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B2 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cn 1–145（145 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.00 Å
6RXX Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state C, Poly-Ala Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cn 1–145（145 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.10 Å
6RXY Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state a Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain Cn 1–145（145 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.70 Å
6RXZ Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state b Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cn 1–145（145 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.40 Å
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SX 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SX 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SX 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SX 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

11 other PDB entries and 11 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0RY17_CHATD
Isoform —
PDB entities 75
Chains and sequence ranges Author chain SX； PDBConstruct 1–145； UniProt 1–145

40S ribosomal protein S24

OrganismNot specified

UniProt P0CU28

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SY； UniProt 1–136 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
5OQL Cryo-EM structure of the 90S pre-ribosome from Chaetomium thermophilum Deposited 2017-08-12 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 55-meric
Chain y 1–136（136 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
6RXU Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 64 PDB declaration: 66-meric
Chain Co 1–136（136 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å
6RXV Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B2 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Co 1–136（136 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.00 Å
6RXX Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state C, Poly-Ala Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Co 1–136（136 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.10 Å
6RXZ Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state b Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Co 1–136（136 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.40 Å
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SY 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SY 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SY 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SY 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

9 other PDB entries and 9 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS24_CHATD
Isoform —
PDB entities 76
Chains and sequence ranges Author chain SY； PDBConstruct 1–136； UniProt 1–136

40S ribosomal protein S25

OrganismNot specified

UniProt G0S1Y9

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain SZ； UniProt 1–99 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain SZ 1–99（99 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain SZ 1–99（99 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SZ 1–99（99 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain SZ 1–99（99 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

4 other PDB entries and 4 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S1Y9_CHATD
Isoform —
PDB entities 77
Chains and sequence ranges Author chain SZ； PDBConstruct 1–99； UniProt 1–99

40S ribosomal protein S26

OrganismNot specified

UniProt G0S2X4

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain Sa； UniProt 1–119 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain Sa 1–119（119 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Sa 1–119（119 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Sa 1–119（119 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Sa 1–119（119 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

4 other PDB entries and 4 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S2X4_CHATD
Isoform —
PDB entities 78
Chains and sequence ranges Author chain Sa； PDBConstruct 1–119； UniProt 1–119

Ribosomal protein s27-like protein

OrganismNot specified

UniProt G0S1S4

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain Sb； UniProt 1–82 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6RXX Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state C, Poly-Ala Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cq 1–82（82 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.10 Å
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain Sb 1–82（82 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Sb 1–82（82 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Sb 1–82（82 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Sb 1–82（82 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

5 other PDB entries and 5 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S1S4_CHATD
Isoform —
PDB entities 79
Chains and sequence ranges Author chain Sb； PDBConstruct 1–82； UniProt 1–82

40S ribosomal protein S28-like protein

OrganismNot specified

UniProt G0S9M9

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain Sc； UniProt 1–68 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
5OQL Cryo-EM structure of the 90S pre-ribosome from Chaetomium thermophilum Deposited 2017-08-12 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 53 PDB declaration: 55-meric
Chain z 1–68（68 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
6RXT Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state A Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 55 PDB declaration: 57-meric
Chain Cp 1–68（68 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.00 Å
6RXU Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 64 PDB declaration: 66-meric
Chain Cp 1–68（68 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å
6RXV Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B2 Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cp 1–68（68 aa）
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.00 Å
6RXX Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state C, Poly-Ala Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cp 1–68（68 aa）
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.10 Å
6RXY Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state a Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 57 PDB declaration: 59-meric
Chain Cp 1–68（68 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.70 Å
6RXZ Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state b Deposited 2019-06-10 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 66 PDB declaration: 68-meric
Chain Cp 1–68（68 aa）
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.40 Å
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain Sc 1–68（68 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Sc 1–68（68 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Sc 1–68（68 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Sc 1–68（68 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

11 other PDB entries and 11 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S9M9_CHATD
Isoform —
PDB entities 80
Chains and sequence ranges Author chain Sc； PDBConstruct 1–68； UniProt 1–68

40S ribosomal protein S29

OrganismNot specified

UniProt Q2HB68

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain Sd； UniProt 1–56 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain Sd 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Sd 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å

2 other PDB entries and 2 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name Q2HB68_CHAGB
Isoform —
PDB entities 81
Chains and sequence ranges Author chain Sd； PDBConstruct 1–56； UniProt 1–56

40S ribosomal protein S30

OrganismNot specified

UniProt Q2H4C5

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain Se； UniProt 3–62 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain Se 1–62（62 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Se 1–62（62 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å

2 other PDB entries and 2 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name Q2H4C5_CHAGB
Isoform —
PDB entities 82
Chains and sequence ranges Author chain Se； PDBConstruct 1–61； UniProt 3–62

40S ribosomal protein S27a-like protein

OrganismNot specified

UniProt G0S2X5

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain Sf； UniProt 1–154 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） Methionine aminopeptidase 2 × 1 （G0SEA9） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7OLC Thermophilic eukaryotic 80S ribosome at idle POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 84-meric
Chain Sf 1–154（154 aa）
Not recorded MG MAGNESIUM ION × 571 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.90 Å
7OLD Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state Deposited 2021-05-19 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Sf 1–154（154 aa）
Not recorded MG MAGNESIUM ION × 3 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
7Z3N Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Sf 1–154（154 aa）
Not recorded MG MAGNESIUM ION × 455 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7Z3O Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation Deposited 2022-03-02 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 82 PDB declaration: 86-meric
Chain Sf 1–154（154 aa）
Not recorded MG MAGNESIUM ION × 472 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.30 Å

4 other PDB entries and 4 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0S2X5_CHATD
Isoform —
PDB entities 83
Chains and sequence ranges Author chain Sf； PDBConstruct 1–154； UniProt 1–154

Methionine aminopeptidase 2

Thermochaetoides thermophila

UniProt G0SEA9

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 81 RNA 4 PDB declaration: 85-meric（85） Consistent with all polymer counts Chain D； UniProt 74–444 Not recorded 28S rRNA × 1 18S rRNA × 1 5S rRNA × 1 5.8S rRNA × 1 Putative guanine nucleotide-binding protein × 1 （G0S9U0） Hyaluronan/mRNA-binding protein domain-containing protein × 1 （G0S428） Ribosome-associated molecular chaperone SSB1 × 1 （G0SCU5） 60S ribosomal protein L2-like protein × 1 （G0S4P8） 60S ribosomal protein L3-like protein × 1 （G0RXW1） 60S ribosomal protein L4-like protein × 1 （G0SFC3） 60S ribosomal protein l5-like protein × 1 （G0SEG2） 60S ribosomal protein L6 × 1 （G0S0D6） 60S ribosomal protein l7-like protein × 1 （G0SFL0） 60S ribosomal protein L8 × 1 （G0SAJ9） 60S ribosomal protein l9-like protein × 1 （G0S0E5） 60S ribosomal protein L10-like protein × 1 （G0SEI1） Putative ribosomal protein × 1 （G0SHQ2） 60S ribosomal protein L12-like protein × 1 （G0SGH8） 60S ribosomal protein L13 × 1 （G0S992） 60S ribosomal protein L14-like protein × 1 （G0S1R0） Ribosomal protein L15 × 1 （G0RZ88） 60S ribosomal protein L16-like protein × 1 （G0SH61） 60S ribosomal protein l17-like protein × 1 （G0SGY1） Ribosomal protein L18-like protein × 1 （G0S9B5） Ribosomal protein L19 × 1 （G0S9T3） 60S ribosomal protein L20 × 1 （G0SCE2） 60S ribosomal protein l21-like protein × 1 （G0S0Z3） 60S ribosomal protein L22-like protein × 1 （G0SDS8） 60S ribosomal protein l23-like protein × 1 （G0SI44） 60S ribosomal protein L24 × 1 （G2Q623） 60S ribosomal protein L25-like protein × 1 （G0S507） 60S ribosomal protein L26-like protein × 1 （G0RYN9） 60S ribosomal protein L27 × 1 （G0RZE9） Ribosomal protein L18e/L15P domain-containing protein × 1 （G2QB77） 60S ribosomal protein L29 × 1 （Q2H9W4） 60S ribosomal protein l30-like protein × 1 （G0SEI0） Putative 60S ribosomal protein × 1 （G0SD68） 60S ribosomal protein L32-like protein × 1 （G0S6V4） 60S ribosomal protein l33-like protein × 1 （G0SCL3） Ribosomal protein l34-like protein × 1 （G0SFN0） dolichyl-diphosphooligosaccharide--protein glycotransferase × 1 （G0S0D7） 60S ribosomal protein L36 × 1 （G0SBN1） Ribosomal protein L37 × 1 （G0S101） 60S ribosomal protein L38 × 1 （G2Q8J4） 60S ribosomal protein L39 × 1 （Q2H9R2） Ubiquitin-like domain-containing protein × 1 （A0A2A9PNA8） 60S ribosomal protein L41-A × 2 （P0CX86） 60S ribosomal protein L44-like protein × 1 （G0SBZ6） 60S ribosomal protein L43-like protein × 1 （G0S6B0） Putative 60S ribosomal protein × 1 （G0SHJ6） 60S acidic ribosomal protein P0 × 1 （G0SGP3） 40S ribosomal protein S0 × 1 （G0RYF9） 40S ribosomal protein S1 × 1 （G0S7T8） 40S ribosomal protein S2-like protein × 1 （G0SAV4） 40S ribosomal protein S3-like protein × 1 （G0S6I7） 40S ribosomal protein S4 × 1 （G0S1A6） 40S ribosomal protein s5-like protein × 1 （G0S1Z0） 40S ribosomal protein S6 × 1 （G0RY43） 40S ribosomal protein S7 × 1 （G0S8C4） 40S ribosomal protein S8 × 1 （G0RY45） 40S ribosomal protein s9-like protein × 1 （G0S0Z4） 40S ribosomal protein s10-like protein × 1 （G0RZD8） 40S ribosomal protein S11-like protein × 1 （G0SF00） 40S ribosomal protein S12 × 1 （G0SHH9） 40S ribosomal protein S13-like protein × 1 （G0RZM9） 40S ribosomal protein S14-like protein × 1 （G0SFL1） 40S ribosomal protein s15-like protein × 1 （G0S084） 40S ribosomal protein S16-like protein × 1 （G0SBR7） 40S ribosomal protein S17-like protein × 1 （G0S871） Putative ribosomal protein × 1 （G0S6J7） 40S ribosomal protein S19-like protein × 1 （G0SFK8） 40S ribosomal protein S20-like protein × 1 （G0S379） 40S ribosomal protein S21-like protein × 1 （G0SI21） 40S ribosomal protein S22-like protein × 1 （G0SHI0） 40S ribosomal protein s23-like protein × 1 （G0RY17） 40S ribosomal protein S24 × 1 （P0CU28） 40S ribosomal protein S25 × 1 （G0S1Y9） 40S ribosomal protein S26 × 1 （G0S2X4） Ribosomal protein s27-like protein × 1 （G0S1S4） 40S ribosomal protein S28-like protein × 1 （G0S9M9） 40S ribosomal protein S29 × 1 （Q2HB68） 40S ribosomal protein S30 × 1 （Q2H4C5） 40S ribosomal protein S27a-like protein × 1 （G0S2X5） ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 3.10 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 8OO0 Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
8ONX High resolution structure of Chaetomium thermophilum MAP2 Deposited 2023-04-04 Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 74–444（371 aa）
Not recorded MN MANGANESE (II) ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；291 K；PEG3350
Resolution 1.30 Å R-free 0.177
8ONZ Chaetomium thermophilum Methionine Aminopeptidase 2 at the 80S ribosome Deposited 2023-04-04 Different construct Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 6 PDB declaration: octameric
Chain A 1–444（444 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.94 Å

2 other PDB entries and 2 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name G0SEA9_CHATD
Isoform —
PDB entities 84
Chains and sequence ranges Author chain D； PDBConstruct 1–371； UniProt 74–444

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 8oo0

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 8oo0
Download Download
▼

2. Structure Basics 2. Structure Basics

Entry ID entry_id8oo0
Deposition date deposition_date2023-04-04
最后修订 last_revision2024-02-21
Structure title titleChaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome
Keywords keywords;Ribosome Associated Factor, Protease, A-site, Factor binding site, Decoding center, Protein Maturation, Proteostasis, NME, p67, p26, Autoproteolysis, MAP, MetAP, MAP2, MetAP2, METAL BINDING PROTEIN ;; METAL BINDING PROTEIN
Experimental Method methodELECTRON MICROSCOPY
▼

3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier96.67 Å
Radius of gyration Rg (electron density) rg_electron98.07 Å
Forward intensity I(0) i0260417000000.00
Molecular weight molecular_weight3073200.0 kDa
Excluded volume excluded_volume3316100 ų
Envelope volume envelope_volume6134300 ų
Hydration-shell volume shell_volume476340 ų
Envelope diameter envelope_diameter323.3 Å
Shell Rg shell_rg114.30 Å
Envelope Rg envelope_rg96.17 Å
Shape Rg shape_rg98.17 Å
Total Rg total_rg97.92 Å
Total atoms total_atoms208770
Residues n_residues17465
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 Å−1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3
▼

4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax246.8 Å
Rg (real space) rg_real94.00 Å
Rg uncertainty (real space) rg_real_error0.37 Å
I(0) (real space) i0_real2.4940e+11
I(0) uncertainty (real space) i0_real_error4.3110e+09
Rg (reciprocal space) rg_reciprocal98.69 Å
I(0) (reciprocal space) i0_reciprocal262200000000.0000
Solution quality estimate total_estimate0.9112
Solution quality rating solution_quality EXCELLENT a EXCELLENT solution
P(r) peaks n_peaks1
Primary peak position r_peak_primary123.4 Å
Skewness Skewness skewness0.083
Kurtosis Kurtosis kurtosis-0.632
Angular range angular_range— – 0.0800 Å−1
Current regularization parameter α current_alpha0.9431
Highest regularization parameter α highest_alpha16730000000.0000
Real-space data points n_real_points17
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 1.000; Stabil: 0.950; Sysdev: 1.000; Positv: 1.000; Valcen: 0.997; Smooth: 0.000
▶

5. Crystallography and Experiment 5. Crystallography & Experiment

▶

6. Entities and Polymers Entities & Polymers (85)

▶

8. Citations (1)

▶

9. Files and Curves (10)