8tw4

TCR in nanodisc ND-I

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

T cell receptor beta variable 6-5, T cell receptor beta chain MC.7.G5, MCHERRY fusion protein

Escherichia coli str. K-12 substr. MG1655

UniProt A0A0K0K1A5

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 8 其他Polymer 3 TCR alpha × 1 T-cell surface glycoprotein CD3 epsilon chain × 2 (P07766) T-cell surface glycoprotein CD3 delta chain × 1 (P04234) T-cell surface glycoprotein CD3 gamma chain × 1 (P09693) T-cell surface glycoprotein CD3 zeta chain,RNA-directed RNA polymerase L × 2 (A0A5P9VSM8,P20963) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 2 beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 CHOLESTEROL × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TVB65_HUMAN
Isoform —
PDB entities 2
Chains and sequence ranges Author chain B; PDBConstruct 1–114; UniProt 1–114

T cell receptor beta variable 6-5, T cell receptor beta chain MC.7.G5, MCHERRY fusion protein

Escherichia coli str. K-12 substr. MG1655

UniProt A0A4D6FVK6

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 8 其他Polymer 3 TCR alpha × 1 T-cell surface glycoprotein CD3 epsilon chain × 2 (P07766) T-cell surface glycoprotein CD3 delta chain × 1 (P04234) T-cell surface glycoprotein CD3 gamma chain × 1 (P09693) T-cell surface glycoprotein CD3 zeta chain,RNA-directed RNA polymerase L × 2 (A0A5P9VSM8,P20963) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 2 beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 CHOLESTEROL × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A4D6FVK6_ECOLI
Isoform —
PDB entities 2
Chains and sequence ranges Author chain B; PDBConstruct 322–556; UniProt 2–236

T cell receptor beta variable 6-5, T cell receptor beta chain MC.7.G5, MCHERRY fusion protein

Escherichia coli str. K-12 substr. MG1655

UniProt P0DTU4

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 8 其他Polymer 3 TCR alpha × 1 T-cell surface glycoprotein CD3 epsilon chain × 2 (P07766) T-cell surface glycoprotein CD3 delta chain × 1 (P04234) T-cell surface glycoprotein CD3 gamma chain × 1 (P09693) T-cell surface glycoprotein CD3 zeta chain,RNA-directed RNA polymerase L × 2 (A0A5P9VSM8,P20963) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 2 beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 CHOLESTEROL × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TRBR2_HUMAN
Isoform —
PDB entities 2
Chains and sequence ranges Author chain B; PDBConstruct 128–311; UniProt 132–315

T-cell surface glycoprotein CD3 epsilon chain

Homo sapiens

UniProt P07766

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 8 其他Polymer 3 TCR alpha × 1 T cell receptor beta variable 6-5, T cell receptor beta chain MC.7.G5, MCHERRY fusion protein × 1 (A0A0K0K1A5,A0A4D6FVK6,P0DTU4) T-cell surface glycoprotein CD3 delta chain × 1 (P04234) T-cell surface glycoprotein CD3 gamma chain × 1 (P09693) T-cell surface glycoprotein CD3 zeta chain,RNA-directed RNA polymerase L × 2 (A0A5P9VSM8,P20963) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 2 beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 CHOLESTEROL × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CD3E_HUMAN
Isoform —
PDB entities 3
Chains and sequence ranges Author chain E; PDBConstruct 1–207; UniProt 1–207 Author chain F; PDBConstruct 1–207; UniProt 1–207

T-cell surface glycoprotein CD3 delta chain

Homo sapiens

UniProt P04234

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 8 其他Polymer 3 TCR alpha × 1 T cell receptor beta variable 6-5, T cell receptor beta chain MC.7.G5, MCHERRY fusion protein × 1 (A0A0K0K1A5,A0A4D6FVK6,P0DTU4) T-cell surface glycoprotein CD3 epsilon chain × 2 (P07766) T-cell surface glycoprotein CD3 gamma chain × 1 (P09693) T-cell surface glycoprotein CD3 zeta chain,RNA-directed RNA polymerase L × 2 (A0A5P9VSM8,P20963) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 2 beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 CHOLESTEROL × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CD3D_HUMAN
Isoform —
PDB entities 4
Chains and sequence ranges Author chain D; PDBConstruct 1–171; UniProt 1–171

T-cell surface glycoprotein CD3 gamma chain

Homo sapiens

UniProt P09693

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 8 其他Polymer 3 TCR alpha × 1 T cell receptor beta variable 6-5, T cell receptor beta chain MC.7.G5, MCHERRY fusion protein × 1 (A0A0K0K1A5,A0A4D6FVK6,P0DTU4) T-cell surface glycoprotein CD3 epsilon chain × 2 (P07766) T-cell surface glycoprotein CD3 delta chain × 1 (P04234) T-cell surface glycoprotein CD3 zeta chain,RNA-directed RNA polymerase L × 2 (A0A5P9VSM8,P20963) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 2 beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 CHOLESTEROL × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CD3G_HUMAN
Isoform —
PDB entities 5
Chains and sequence ranges Author chain G; PDBConstruct 1–182; UniProt 1–182

T-cell surface glycoprotein CD3 zeta chain,RNA-directed RNA polymerase L

human respiratory syncytial virus

UniProt A0A5P9VSM8

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 8 其他Polymer 3 TCR alpha × 1 T cell receptor beta variable 6-5, T cell receptor beta chain MC.7.G5, MCHERRY fusion protein × 1 (A0A0K0K1A5,A0A4D6FVK6,P0DTU4) T-cell surface glycoprotein CD3 epsilon chain × 2 (P07766) T-cell surface glycoprotein CD3 delta chain × 1 (P04234) T-cell surface glycoprotein CD3 gamma chain × 1 (P09693) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 2 beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 CHOLESTEROL × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A5P9VSM8_HRSV
Isoform —
PDB entities 6
Chains and sequence ranges Author chain X; PDBConstruct 175–412; UniProt 1743–1980 Author chain Y; PDBConstruct 175–412; UniProt 1743–1980

T-cell surface glycoprotein CD3 zeta chain,RNA-directed RNA polymerase L

human respiratory syncytial virus

UniProt P20963

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 8 其他Polymer 3 TCR alpha × 1 T cell receptor beta variable 6-5, T cell receptor beta chain MC.7.G5, MCHERRY fusion protein × 1 (A0A0K0K1A5,A0A4D6FVK6,P0DTU4) T-cell surface glycoprotein CD3 epsilon chain × 2 (P07766) T-cell surface glycoprotein CD3 delta chain × 1 (P04234) T-cell surface glycoprotein CD3 gamma chain × 1 (P09693) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 2 beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 CHOLESTEROL × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CD3Z_HUMAN
Isoform —
PDB entities 6
Chains and sequence ranges Author chain X; PDBConstruct 1–164; UniProt 1–164 Author chain Y; PDBConstruct 1–164; UniProt 1–164

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id8tw4
Deposition date deposition_date2023-08-20
Structure title titleTCR in nanodisc ND-I
Keywords keywordsT-cell receptor, TCR, 1G4, nanodisc, CD3, IMMUNE SYSTEM; IMMUNE SYSTEM
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

8tw4__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

8tw4__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

8tw4__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)29.78 Å
Rg (electron density)29.10 Å
Total Rg29.94 Å
Atom count6401
Residues828
Excluded volume113680 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 8tw4__assembly_1__model_1 octameric (8) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (10)

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7. Citations (1)