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9rtu

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)

Method: ELECTRON MICROSCOPY Dmax: 292.2 Å Quality: EXCELLENT

SAXS Profile

SAXS profile for 9rtu

P(r) Distribution

P(r) distribution for 9rtu
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1. Structure Basics

entry_id9rtu
deposition_date2025-07-03
titleStructure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)
keywordsEF-G, robosome, 70S, apramycin, translocation, RIBOSOME, mutation; RIBOSOME
methodELECTRON MICROSCOPY
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Download Data

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2. SAXS Parameters (CRYSOL)

rg_guinier82.92 Å
rg_electron83.64 Å
i0165556000000.00
molecular_weight2276400.0 kDa
excluded_volume2353500 ų
envelope_volume4010800 ų
shell_volume364840 ų
envelope_diameter271.4 Å
shell_rg99.62 Å
envelope_rg81.93 Å
shape_rg83.72 Å
total_rg83.56 Å
total_atoms256907
n_residues11337
n_harmonics20
q_range— – 0.5000 Å−1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3
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3. P(r) Analysis (GNOM)

dmax292.2 Å
rg_real84.96 Å
rg_real_error1.65 Å
i0_real1.6400e+11
i0_real_error3.4440e+09
rg_reciprocal84.43 Å
i0_reciprocal166300000000.0000
total_estimate0.9058
solution_quality EXCELLENT a EXCELLENT solution
n_peaks2
r_peak_primary107.7 Å
skewness0.363
kurtosis0.089
angular_range— – 0.0950 Å−1
current_alpha1.1810
highest_alpha11250000000.0000
n_real_points20
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.744; Stabil: 0.915; Sysdev: 1.000; Positv: 1.000; Valcen: 0.955; Smooth: 0.854
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4. Crystallography & Experiment

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5. Entities & Polymer Info (65)

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6. Citations (1)

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7. Files & Curves (10)