当前蛋白身份:Q13356
重新检索
差异标签只比较当前检索结果;所有PDB和assembly原始记录仍分别保留。
相关结构差异明细
一行代表一个 PDB 条目中的一个 biological assembly;同一蛋白的多个单体会分别列出。
| PDB 条目 | Assembly / 聚集状态 | 构建体 | 突变与修饰 | 配体、离子与非聚合物 | 实验方法 | 实验环境 | 结构质量 |
|---|---|---|---|---|---|---|---|
| 1ZKC Crystal Structure of the cyclophiln_RING domain of human peptidylprolyl isomerase (cyclophilin)-like 2 isoform b 提交 2005-05-02 | Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 A
280–457(178 aa)
片段:sequence databank residues 20-197
|
未记录 | BME BETA-MERCAPTOETHANOL × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
pH 7.5;298 K;0.8M Potassium Sodium Tartrate tetrahydrate, 0.1M Hepes, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K, pH 7.50
|
分辨率 1.65 Å R-free 0.194 |
| 1ZKC Crystal Structure of the cyclophiln_RING domain of human peptidylprolyl isomerase (cyclophilin)-like 2 isoform b 提交 2005-05-02 | Assembly 2 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 B
280–457(178 aa)
片段:sequence databank residues 20-197
|
未记录 | BME BETA-MERCAPTOETHANOL × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
pH 7.5;298 K;0.8M Potassium Sodium Tartrate tetrahydrate, 0.1M Hepes, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K, pH 7.50
|
分辨率 1.65 Å R-free 0.194 |
| 7ABI Human pre-Bact-2 spliceosome 提交 2020-09-07 | Assembly 1 蛋白–RNA 异源复合物;蛋白 × 52 PDB 声明:56-meric(56) 与全部聚合物一致 |
链 t
1–520(520 aa)
|
未记录 | GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 IHP INOSITOL HEXAKISPHOSPHATE × 1 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.9
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 8.00 Å |
| 7DVQ Cryo-EM Structure of the Activated Human Minor Spliceosome (minor Bact Complex) 提交 2021-01-14 | Assembly 1 蛋白–RNA 异源复合物;蛋白 × 45 PDB 声明:49-meric(49) 与全部聚合物一致 |
链 9
1–520(520 aa)
|
未记录 | IHP INOSITOL HEXAKISPHOSPHATE × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 5 K POTASSIUM ION × 2 G5J 5'-O-[(S)-hydroxy{[(R)-hydroxy{[(S)-hydroxy(methoxy)phosphoryl]oxy}phosphoryl]oxy}phosphoryl]guanosine × 1 ZN ZINC ION × 7 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.9
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 2.89 Å |
| 7QTT Structural organization of a late activated human spliceosome (Baqr, core region) 提交 2022-01-15 | Assembly 1 蛋白–RNA 异源复合物;蛋白 × 33 PDB 声明:37-meric(37) 与全部聚合物一致 |
链 u
1–520(520 aa)
|
未记录 | ZN ZINC ION × 12 IHP INOSITOL HEXAKISPHOSPHATE × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 7 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.9;All solutions were sterile filtered using a 0.22um vacuum filtration unit.
cryo-EM玻璃化条件
冷冻剂 ETHANE;Volumes of 4 ul of the concentrated sample were applied to one side of glow-discharged UltrAuFoil 200 2/2 grids (Quantifoil) in a Vitrobot Mark IV (FEI) operating at 4 degrees Celsius and 100% humidity. The grids were blotted for 2s with blotting force 5 and immediately frozen by plunging into liquid ethane.
|
分辨率 3.10 Å |
| 8CH6 Structure of a late-stage activated spliceosome (BAqr) arrested with a dominant-negative Aquarius mutant (state B complex). 提交 2023-02-07 | Assembly 1 蛋白–RNA 异源复合物;蛋白 × 55 PDB 声明:59-meric(59) 与全部聚合物一致 |
链 u
1–520(520 aa)
|
未记录 | ZN ZINC ION × 12 IHP INOSITOL HEXAKISPHOSPHATE × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 7 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.9;All solutions were sterile-filtered using a 0.22um vacuum filtration unit.
cryo-EM玻璃化条件
冷冻剂 ETHANE;Volumes of 4 ul of the concentrated sample were applied to one side of glow-discharged UltrAuFoil 200 2/2 grids (Quantifoil) in a Vitrobot Mark IV (FEI), operated at 4 degrees Celsius and 100% humidity. The grids were blotted for 2s with blotting force 5 and immediately frozen by plunging into liquid ethane.
|
分辨率 5.90 Å |
| 8I0P The cryo-EM structure of human pre-Bact complex 提交 2023-01-11 | Assembly 1 蛋白–RNA 异源复合物;蛋白 × 47 PDB 声明:51-meric(51) 与全部聚合物一致 |
链 9
1–520(520 aa)
|
未记录 | GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ZN ZINC ION × 4 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.9
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.40 Å |
| 8I0R The cryo-EM structure of human Bact-I complex 提交 2023-01-11 | Assembly 1 蛋白–RNA 异源复合物;蛋白 × 51 PDB 声明:55-meric(55) 与全部聚合物一致 |
链 9
1–520(520 aa)
|
未记录 | IHP INOSITOL HEXAKISPHOSPHATE × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 6 ZN ZINC ION × 7 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.9
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.00 Å |
| 8I0S The cryo-EM structure of human Bact-II complex 提交 2023-01-11 | Assembly 1 蛋白–RNA 异源复合物;蛋白 × 46 PDB 声明:50-meric(50) 与全部聚合物一致 |
链 9
1–520(520 aa)
|
未记录 | IHP INOSITOL HEXAKISPHOSPHATE × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 7 ZN ZINC ION × 7 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.9
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 4.20 Å |
| 8I0T The cryo-EM structure of human Bact-III complex 提交 2023-01-11 | Assembly 1 蛋白–RNA 异源复合物;蛋白 × 52 PDB 声明:56-meric(56) 与全部聚合物一致 |
链 9
1–520(520 aa)
|
未记录 | IHP INOSITOL HEXAKISPHOSPHATE × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 7 ZN ZINC ION × 7 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.9
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.00 Å |
| 9R3D Cryo-EM structure of the human pre-Bact-OTS complex (whole map) 提交 2025-05-04 | Assembly 1 蛋白–RNA 异源复合物;蛋白 × 14 PDB 声明:17-meric(17) 与全部聚合物一致 |
链 t
1–520(520 aa)
|
未记录 | IHP INOSITOL HEXAKISPHOSPHATE × 1 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.9
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.12 Å |
| 9R8V Cryo-EM structure of the human pre-Bact-OTS complex (whole map) 提交 2025-05-17 | Assembly 1 蛋白–RNA 异源复合物;蛋白 × 59 PDB 声明:63-meric(63) 与全部聚合物一致 |
链 t
1–520(520 aa)
|
未记录 | 未记录非水小分子 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.9
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 8.50 Å |