当前蛋白身份:Q13356 重新检索
本组结构的主要差异维度
构建体不同 突变/修饰不同 组装状态不同 配体/离子不同 实验方法不同 实验环境不同 结构质量指标不同

差异标签只比较当前检索结果;所有PDB和assembly原始记录仍分别保留。

相关结构差异明细

一行代表一个 PDB 条目中的一个 biological assembly;同一蛋白的多个单体会分别列出。

PDB 条目 Assembly / 聚集状态 构建体 突变与修饰 配体、离子与非聚合物 实验方法 实验环境 结构质量
1ZKC Crystal Structure of the cyclophiln_RING domain of human peptidylprolyl isomerase (cyclophilin)-like 2 isoform b 提交 2005-05-02 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 280–457(178 aa) 片段:sequence databank residues 20-197
未记录 BME BETA-MERCAPTOETHANOL × 1 X-RAY DIFFRACTION
X-ray结晶条件 pH 7.5;298 K;0.8M Potassium Sodium Tartrate tetrahydrate, 0.1M Hepes, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K, pH 7.50
分辨率 1.65 Å R-free 0.194
1ZKC Crystal Structure of the cyclophiln_RING domain of human peptidylprolyl isomerase (cyclophilin)-like 2 isoform b 提交 2005-05-02 Assembly 2 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 B 280–457(178 aa) 片段:sequence databank residues 20-197
未记录 BME BETA-MERCAPTOETHANOL × 1 X-RAY DIFFRACTION
X-ray结晶条件 pH 7.5;298 K;0.8M Potassium Sodium Tartrate tetrahydrate, 0.1M Hepes, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K, pH 7.50
分辨率 1.65 Å R-free 0.194
7ABI Human pre-Bact-2 spliceosome 提交 2020-09-07 Assembly 1 蛋白–RNA 异源复合物;蛋白 × 52 PDB 声明:56-meric(56) 与全部聚合物一致
链 t 1–520(520 aa)
未记录 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 IHP INOSITOL HEXAKISPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.9
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 8.00 Å
7DVQ Cryo-EM Structure of the Activated Human Minor Spliceosome (minor Bact Complex) 提交 2021-01-14 Assembly 1 蛋白–RNA 异源复合物;蛋白 × 45 PDB 声明:49-meric(49) 与全部聚合物一致
链 9 1–520(520 aa)
未记录 IHP INOSITOL HEXAKISPHOSPHATE × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 5 K POTASSIUM ION × 2 G5J 5'-O-[(S)-hydroxy{[(R)-hydroxy{[(S)-hydroxy(methoxy)phosphoryl]oxy}phosphoryl]oxy}phosphoryl]guanosine × 1 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.9
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 2.89 Å
7QTT Structural organization of a late activated human spliceosome (Baqr, core region) 提交 2022-01-15 Assembly 1 蛋白–RNA 异源复合物;蛋白 × 33 PDB 声明:37-meric(37) 与全部聚合物一致
链 u 1–520(520 aa)
未记录 ZN ZINC ION × 12 IHP INOSITOL HEXAKISPHOSPHATE × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 7 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.9;All solutions were sterile filtered using a 0.22um vacuum filtration unit.
cryo-EM玻璃化条件 冷冻剂 ETHANE;Volumes of 4 ul of the concentrated sample were applied to one side of glow-discharged UltrAuFoil 200 2/2 grids (Quantifoil) in a Vitrobot Mark IV (FEI) operating at 4 degrees Celsius and 100% humidity. The grids were blotted for 2s with blotting force 5 and immediately frozen by plunging into liquid ethane.
分辨率 3.10 Å
8CH6 Structure of a late-stage activated spliceosome (BAqr) arrested with a dominant-negative Aquarius mutant (state B complex). 提交 2023-02-07 Assembly 1 蛋白–RNA 异源复合物;蛋白 × 55 PDB 声明:59-meric(59) 与全部聚合物一致
链 u 1–520(520 aa)
未记录 ZN ZINC ION × 12 IHP INOSITOL HEXAKISPHOSPHATE × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 7 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.9;All solutions were sterile-filtered using a 0.22um vacuum filtration unit.
cryo-EM玻璃化条件 冷冻剂 ETHANE;Volumes of 4 ul of the concentrated sample were applied to one side of glow-discharged UltrAuFoil 200 2/2 grids (Quantifoil) in a Vitrobot Mark IV (FEI), operated at 4 degrees Celsius and 100% humidity. The grids were blotted for 2s with blotting force 5 and immediately frozen by plunging into liquid ethane.
分辨率 5.90 Å
8I0P The cryo-EM structure of human pre-Bact complex 提交 2023-01-11 Assembly 1 蛋白–RNA 异源复合物;蛋白 × 47 PDB 声明:51-meric(51) 与全部聚合物一致
链 9 1–520(520 aa)
未记录 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ZN ZINC ION × 4 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.9
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 3.40 Å
8I0R The cryo-EM structure of human Bact-I complex 提交 2023-01-11 Assembly 1 蛋白–RNA 异源复合物;蛋白 × 51 PDB 声明:55-meric(55) 与全部聚合物一致
链 9 1–520(520 aa)
未记录 IHP INOSITOL HEXAKISPHOSPHATE × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 6 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.9
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 3.00 Å
8I0S The cryo-EM structure of human Bact-II complex 提交 2023-01-11 Assembly 1 蛋白–RNA 异源复合物;蛋白 × 46 PDB 声明:50-meric(50) 与全部聚合物一致
链 9 1–520(520 aa)
未记录 IHP INOSITOL HEXAKISPHOSPHATE × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 7 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.9
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 4.20 Å
8I0T The cryo-EM structure of human Bact-III complex 提交 2023-01-11 Assembly 1 蛋白–RNA 异源复合物;蛋白 × 52 PDB 声明:56-meric(56) 与全部聚合物一致
链 9 1–520(520 aa)
未记录 IHP INOSITOL HEXAKISPHOSPHATE × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 7 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.9
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 3.00 Å
9R3D Cryo-EM structure of the human pre-Bact-OTS complex (whole map) 提交 2025-05-04 Assembly 1 蛋白–RNA 异源复合物;蛋白 × 14 PDB 声明:17-meric(17) 与全部聚合物一致
链 t 1–520(520 aa)
未记录 IHP INOSITOL HEXAKISPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.9
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 3.12 Å
9R8V Cryo-EM structure of the human pre-Bact-OTS complex (whole map) 提交 2025-05-17 Assembly 1 蛋白–RNA 异源复合物;蛋白 × 59 PDB 声明:63-meric(63) 与全部聚合物一致
链 t 1–520(520 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.9
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 8.50 Å