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9r3d

Cryo-EM structure of the human pre-Bact-OTS complex (whole map)

Method: ELECTRON MICROSCOPY Dmax: 220.8 Å Quality: GOOD

SAXS Profile

SAXS profile for 9r3d

P(r) Distribution

P(r) distribution for 9r3d
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1. Structure Basics

entry_id9r3d
deposition_date2025-05-04
titleCryo-EM structure of the human pre-Bact-OTS complex (whole map)
keywordsspliceosome, SPLICING; SPLICING
methodELECTRON MICROSCOPY
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Download Data

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2. SAXS Parameters (CRYSOL)

rg_guinier65.15 Å
rg_electron65.21 Å
i06046710000.00
molecular_weight596740.0 kDa
excluded_volume720810 ų
envelope_volume1202300 ų
shell_volume149380 ų
envelope_diameter240.5 Å
shell_rg67.28 Å
envelope_rg66.60 Å
shape_rg65.39 Å
total_rg64.67 Å
total_atoms41855
n_residues5336
n_harmonics20
q_range— – 0.5000 Å−1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3
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3. P(r) Analysis (GNOM)

dmax220.8 Å
rg_real65.34 Å
rg_real_error2.90 Å
i0_real6.0470e+09
i0_real_error1.4210e+08
rg_reciprocal64.95 Å
i0_reciprocal6042000000.0000
total_estimate0.8540
solution_quality GOOD a GOOD solution
n_peaks2
r_peak_primary73.6 Å
skewness0.433
kurtosis-0.195
angular_range— – 0.1200 Å−1
current_alpha0.0000
highest_alpha813100000.0000
n_real_points25
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.845; Stabil: 0.998; Sysdev: 1.000; Positv: 1.000; Valcen: 0.998; Smooth: 0.573
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4. Crystallography & Experiment

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5. Entities & Polymer Info (18)

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6. Citations (1)

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7. Files & Curves (10)