4rku

Crystal structure of plant Photosystem I at 3 Angstrom resolution

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Photosystem I P700 chlorophyll a apoprotein A1

OrganismNot specified

UniProt P05310

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 17 Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P05311) Photosystem I iron-sulfur center × 1 (P10793) Photosystem I reaction center subunit II, chloroplastic × 1 Photosystem I reaction center subunit IV B, chloroplastic × 1 Photosystem I reaction center subunit III, chloroplastic × 1 Photosystem I reaction center subunit V, chloroplastic × 1 Photosystem I reaction center subunit VI, chloroplastic × 1 Photosystem I reaction center subunit VIII × 1 (P17227) Photosystem I reaction center subunit IX × 1 (D5MAL3) Photosystem I reaction center subunit X psaK × 1 (E1C9L3) Photosystem I reaction center subunit XI, chloroplastic × 1 Photosystem I-N subunit × 1 (E1C9K7) Chlorophyll a-b binding protein 6A, chloroplastic × 1 Type II chlorophyll a/b binding protein from photosystem I × 1 (Q41038) Chlorophyll a-b binding protein 3, chloroplastic × 1 (Q32904) Chlorophyll a-b binding protein P4, chloroplastic × 1 (Q9SQL2) PHYLLOQUINONE × 2 BETA-CAROTENE × 21 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 5 CHLOROPHYLL A × 157 IRON/SULFUR CLUSTER × 3 CHLOROPHYLL A ISOMER × 1 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 1 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 2 (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL × 6 ;(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL ; × 1 SN-GLYCEROL-3-PHOSPHATE × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSAA_PEA
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–721; UniProt 38–758

Photosystem I P700 chlorophyll a apoprotein A2

OrganismNot specified

UniProt P05311

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 17 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P05310) Photosystem I iron-sulfur center × 1 (P10793) Photosystem I reaction center subunit II, chloroplastic × 1 Photosystem I reaction center subunit IV B, chloroplastic × 1 Photosystem I reaction center subunit III, chloroplastic × 1 Photosystem I reaction center subunit V, chloroplastic × 1 Photosystem I reaction center subunit VI, chloroplastic × 1 Photosystem I reaction center subunit VIII × 1 (P17227) Photosystem I reaction center subunit IX × 1 (D5MAL3) Photosystem I reaction center subunit X psaK × 1 (E1C9L3) Photosystem I reaction center subunit XI, chloroplastic × 1 Photosystem I-N subunit × 1 (E1C9K7) Chlorophyll a-b binding protein 6A, chloroplastic × 1 Type II chlorophyll a/b binding protein from photosystem I × 1 (Q41038) Chlorophyll a-b binding protein 3, chloroplastic × 1 (Q32904) Chlorophyll a-b binding protein P4, chloroplastic × 1 (Q9SQL2) PHYLLOQUINONE × 2 BETA-CAROTENE × 21 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 5 CHLOROPHYLL A × 157 IRON/SULFUR CLUSTER × 3 CHLOROPHYLL A ISOMER × 1 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 1 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 2 (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL × 6 ;(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL ; × 1 SN-GLYCEROL-3-PHOSPHATE × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSAB_PEA
Isoform —
PDB entities 2
Chains and sequence ranges Author chain B; PDBConstruct 1–731; UniProt 3–733

Photosystem I iron-sulfur center

OrganismNot specified

UniProt P10793

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 17 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P05310) Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P05311) Photosystem I reaction center subunit II, chloroplastic × 1 Photosystem I reaction center subunit IV B, chloroplastic × 1 Photosystem I reaction center subunit III, chloroplastic × 1 Photosystem I reaction center subunit V, chloroplastic × 1 Photosystem I reaction center subunit VI, chloroplastic × 1 Photosystem I reaction center subunit VIII × 1 (P17227) Photosystem I reaction center subunit IX × 1 (D5MAL3) Photosystem I reaction center subunit X psaK × 1 (E1C9L3) Photosystem I reaction center subunit XI, chloroplastic × 1 Photosystem I-N subunit × 1 (E1C9K7) Chlorophyll a-b binding protein 6A, chloroplastic × 1 Type II chlorophyll a/b binding protein from photosystem I × 1 (Q41038) Chlorophyll a-b binding protein 3, chloroplastic × 1 (Q32904) Chlorophyll a-b binding protein P4, chloroplastic × 1 (Q9SQL2) PHYLLOQUINONE × 2 BETA-CAROTENE × 21 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 5 CHLOROPHYLL A × 157 IRON/SULFUR CLUSTER × 3 CHLOROPHYLL A ISOMER × 1 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 1 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 2 (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL × 6 ;(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL ; × 1 SN-GLYCEROL-3-PHOSPHATE × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSAC_PEA
Isoform —
PDB entities 3
Chains and sequence ranges Author chain C; PDBConstruct 1–80; UniProt 2–81

Photosystem I reaction center subunit VIII

OrganismNot specified

UniProt P17227

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 17 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P05310) Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P05311) Photosystem I iron-sulfur center × 1 (P10793) Photosystem I reaction center subunit II, chloroplastic × 1 Photosystem I reaction center subunit IV B, chloroplastic × 1 Photosystem I reaction center subunit III, chloroplastic × 1 Photosystem I reaction center subunit V, chloroplastic × 1 Photosystem I reaction center subunit VI, chloroplastic × 1 Photosystem I reaction center subunit IX × 1 (D5MAL3) Photosystem I reaction center subunit X psaK × 1 (E1C9L3) Photosystem I reaction center subunit XI, chloroplastic × 1 Photosystem I-N subunit × 1 (E1C9K7) Chlorophyll a-b binding protein 6A, chloroplastic × 1 Type II chlorophyll a/b binding protein from photosystem I × 1 (Q41038) Chlorophyll a-b binding protein 3, chloroplastic × 1 (Q32904) Chlorophyll a-b binding protein P4, chloroplastic × 1 (Q9SQL2) PHYLLOQUINONE × 2 BETA-CAROTENE × 21 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 5 CHLOROPHYLL A × 157 IRON/SULFUR CLUSTER × 3 CHLOROPHYLL A ISOMER × 1 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 1 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 2 (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL × 6 ;(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL ; × 1 SN-GLYCEROL-3-PHOSPHATE × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSAI_PEA
Isoform —
PDB entities 9
Chains and sequence ranges Author chain I; PDBConstruct 1–26; UniProt 5–30

Photosystem I reaction center subunit IX

OrganismNot specified

UniProt D5MAL3

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 17 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P05310) Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P05311) Photosystem I iron-sulfur center × 1 (P10793) Photosystem I reaction center subunit II, chloroplastic × 1 Photosystem I reaction center subunit IV B, chloroplastic × 1 Photosystem I reaction center subunit III, chloroplastic × 1 Photosystem I reaction center subunit V, chloroplastic × 1 Photosystem I reaction center subunit VI, chloroplastic × 1 Photosystem I reaction center subunit VIII × 1 (P17227) Photosystem I reaction center subunit X psaK × 1 (E1C9L3) Photosystem I reaction center subunit XI, chloroplastic × 1 Photosystem I-N subunit × 1 (E1C9K7) Chlorophyll a-b binding protein 6A, chloroplastic × 1 Type II chlorophyll a/b binding protein from photosystem I × 1 (Q41038) Chlorophyll a-b binding protein 3, chloroplastic × 1 (Q32904) Chlorophyll a-b binding protein P4, chloroplastic × 1 (Q9SQL2) PHYLLOQUINONE × 2 BETA-CAROTENE × 21 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 5 CHLOROPHYLL A × 157 IRON/SULFUR CLUSTER × 3 CHLOROPHYLL A ISOMER × 1 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 1 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 2 (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL × 6 ;(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL ; × 1 SN-GLYCEROL-3-PHOSPHATE × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name D5MAL3_PEA
Isoform —
PDB entities 10
Chains and sequence ranges Author chain J; PDBConstruct 1–40; UniProt 2–41

Photosystem I reaction center subunit X psaK

OrganismNot specified

UniProt E1C9L3

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 17 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P05310) Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P05311) Photosystem I iron-sulfur center × 1 (P10793) Photosystem I reaction center subunit II, chloroplastic × 1 Photosystem I reaction center subunit IV B, chloroplastic × 1 Photosystem I reaction center subunit III, chloroplastic × 1 Photosystem I reaction center subunit V, chloroplastic × 1 Photosystem I reaction center subunit VI, chloroplastic × 1 Photosystem I reaction center subunit VIII × 1 (P17227) Photosystem I reaction center subunit IX × 1 (D5MAL3) Photosystem I reaction center subunit XI, chloroplastic × 1 Photosystem I-N subunit × 1 (E1C9K7) Chlorophyll a-b binding protein 6A, chloroplastic × 1 Type II chlorophyll a/b binding protein from photosystem I × 1 (Q41038) Chlorophyll a-b binding protein 3, chloroplastic × 1 (Q32904) Chlorophyll a-b binding protein P4, chloroplastic × 1 (Q9SQL2) PHYLLOQUINONE × 2 BETA-CAROTENE × 21 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 5 CHLOROPHYLL A × 157 IRON/SULFUR CLUSTER × 3 CHLOROPHYLL A ISOMER × 1 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 1 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 2 (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL × 6 ;(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL ; × 1 SN-GLYCEROL-3-PHOSPHATE × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name E1C9L3_PEA
Isoform —
PDB entities 11
Chains and sequence ranges Author chain K; PDBConstruct 1–72; UniProt 1–72

Photosystem I-N subunit

OrganismNot specified

UniProt E1C9K7

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 17 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P05310) Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P05311) Photosystem I iron-sulfur center × 1 (P10793) Photosystem I reaction center subunit II, chloroplastic × 1 Photosystem I reaction center subunit IV B, chloroplastic × 1 Photosystem I reaction center subunit III, chloroplastic × 1 Photosystem I reaction center subunit V, chloroplastic × 1 Photosystem I reaction center subunit VI, chloroplastic × 1 Photosystem I reaction center subunit VIII × 1 (P17227) Photosystem I reaction center subunit IX × 1 (D5MAL3) Photosystem I reaction center subunit X psaK × 1 (E1C9L3) Photosystem I reaction center subunit XI, chloroplastic × 1 Chlorophyll a-b binding protein 6A, chloroplastic × 1 Type II chlorophyll a/b binding protein from photosystem I × 1 (Q41038) Chlorophyll a-b binding protein 3, chloroplastic × 1 (Q32904) Chlorophyll a-b binding protein P4, chloroplastic × 1 (Q9SQL2) PHYLLOQUINONE × 2 BETA-CAROTENE × 21 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 5 CHLOROPHYLL A × 157 IRON/SULFUR CLUSTER × 3 CHLOROPHYLL A ISOMER × 1 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 1 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 2 (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL × 6 ;(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL ; × 1 SN-GLYCEROL-3-PHOSPHATE × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name E1C9K7_PEA
Isoform —
PDB entities 13
Chains and sequence ranges Author chain N; PDBConstruct 1–85; UniProt 1–85

Type II chlorophyll a/b binding protein from photosystem I

OrganismNot specified

UniProt Q41038

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 17 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P05310) Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P05311) Photosystem I iron-sulfur center × 1 (P10793) Photosystem I reaction center subunit II, chloroplastic × 1 Photosystem I reaction center subunit IV B, chloroplastic × 1 Photosystem I reaction center subunit III, chloroplastic × 1 Photosystem I reaction center subunit V, chloroplastic × 1 Photosystem I reaction center subunit VI, chloroplastic × 1 Photosystem I reaction center subunit VIII × 1 (P17227) Photosystem I reaction center subunit IX × 1 (D5MAL3) Photosystem I reaction center subunit X psaK × 1 (E1C9L3) Photosystem I reaction center subunit XI, chloroplastic × 1 Photosystem I-N subunit × 1 (E1C9K7) Chlorophyll a-b binding protein 6A, chloroplastic × 1 Chlorophyll a-b binding protein 3, chloroplastic × 1 (Q32904) Chlorophyll a-b binding protein P4, chloroplastic × 1 (Q9SQL2) PHYLLOQUINONE × 2 BETA-CAROTENE × 21 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 5 CHLOROPHYLL A × 157 IRON/SULFUR CLUSTER × 3 CHLOROPHYLL A ISOMER × 1 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 1 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 2 (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL × 6 ;(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL ; × 1 SN-GLYCEROL-3-PHOSPHATE × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name Q41038_PEA
Isoform —
PDB entities 15
Chains and sequence ranges Author chain 2; PDBConstruct 1–199; UniProt 59–257

Chlorophyll a-b binding protein 3, chloroplastic

OrganismNot specified

UniProt Q32904

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 17 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P05310) Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P05311) Photosystem I iron-sulfur center × 1 (P10793) Photosystem I reaction center subunit II, chloroplastic × 1 Photosystem I reaction center subunit IV B, chloroplastic × 1 Photosystem I reaction center subunit III, chloroplastic × 1 Photosystem I reaction center subunit V, chloroplastic × 1 Photosystem I reaction center subunit VI, chloroplastic × 1 Photosystem I reaction center subunit VIII × 1 (P17227) Photosystem I reaction center subunit IX × 1 (D5MAL3) Photosystem I reaction center subunit X psaK × 1 (E1C9L3) Photosystem I reaction center subunit XI, chloroplastic × 1 Photosystem I-N subunit × 1 (E1C9K7) Chlorophyll a-b binding protein 6A, chloroplastic × 1 Type II chlorophyll a/b binding protein from photosystem I × 1 (Q41038) Chlorophyll a-b binding protein P4, chloroplastic × 1 (Q9SQL2) PHYLLOQUINONE × 2 BETA-CAROTENE × 21 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 5 CHLOROPHYLL A × 157 IRON/SULFUR CLUSTER × 3 CHLOROPHYLL A ISOMER × 1 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 1 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 2 (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL × 6 ;(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL ; × 1 SN-GLYCEROL-3-PHOSPHATE × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CB23_PEA
Isoform —
PDB entities 16
Chains and sequence ranges Author chain 3; PDBConstruct 1–275; UniProt 1–275

Chlorophyll a-b binding protein P4, chloroplastic

OrganismNot specified

UniProt Q9SQL2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 17 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P05310) Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P05311) Photosystem I iron-sulfur center × 1 (P10793) Photosystem I reaction center subunit II, chloroplastic × 1 Photosystem I reaction center subunit IV B, chloroplastic × 1 Photosystem I reaction center subunit III, chloroplastic × 1 Photosystem I reaction center subunit V, chloroplastic × 1 Photosystem I reaction center subunit VI, chloroplastic × 1 Photosystem I reaction center subunit VIII × 1 (P17227) Photosystem I reaction center subunit IX × 1 (D5MAL3) Photosystem I reaction center subunit X psaK × 1 (E1C9L3) Photosystem I reaction center subunit XI, chloroplastic × 1 Photosystem I-N subunit × 1 (E1C9K7) Chlorophyll a-b binding protein 6A, chloroplastic × 1 Type II chlorophyll a/b binding protein from photosystem I × 1 (Q41038) Chlorophyll a-b binding protein 3, chloroplastic × 1 (Q32904) PHYLLOQUINONE × 2 BETA-CAROTENE × 21 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 5 CHLOROPHYLL A × 157 IRON/SULFUR CLUSTER × 3 CHLOROPHYLL A ISOMER × 1 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 1 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 2 (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL × 6 ;(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL ; × 1 SN-GLYCEROL-3-PHOSPHATE × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CB24_PEA
Isoform —
PDB entities 17
Chains and sequence ranges Author chain 4; PDBConstruct 1–196; UniProt 53–248

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id4rku
Deposition date deposition_date2014-10-14
Structure title titleCrystal structure of plant Photosystem I at 3 Angstrom resolution
Keywords keywordslight harvesting, membrane complex, plastocyanin, ferredoxin, chloroplast membrane, PHOTOSYNTHESIS; PHOTOSYNTHESIS
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

4rku__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

4rku__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

4rku__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)52.27 Å
Rg (electron density)51.56 Å
Total Rg51.74 Å
Atom count34540
Residues3094
Excluded volume644480 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 4rku__assembly_1__model_1 heptadecameric (17) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (28)

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6. Fold Classification (SCOP + CATH) 19 domains

SCOP 2.08 (11 domains)

Domain ID domain_idd4rku1_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.43 — Chlorophyll a-b binding protein
Superfamily Superfamily superfamilyf.43.1 — Chlorophyll a-b binding protein
Family Family familyf.43.1.0 — automated matches
Domain ID domain_idd4rku3_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.43 — Chlorophyll a-b binding protein
Superfamily Superfamily superfamilyf.43.1 — Chlorophyll a-b binding protein
Family Family familyf.43.1.0 — automated matches
Domain ID domain_idd4rku4_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.43 — Chlorophyll a-b binding protein
Superfamily Superfamily superfamilyf.43.1 — Chlorophyll a-b binding protein
Family Family familyf.43.1.0 — automated matches
Domain ID domain_idd4rkua_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.29 — Photosystem I subunits PsaA/PsaB
Superfamily Superfamily superfamilyf.29.1 — Photosystem I subunits PsaA/PsaB
Family Family familyf.29.1.0 — automated matches
Domain ID domain_idd4rkub_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.29 — Photosystem I subunits PsaA/PsaB
Superfamily Superfamily superfamilyf.29.1 — Photosystem I subunits PsaA/PsaB
Family Family familyf.29.1.1 — Photosystem I subunits PsaA/PsaB
Domain ID domain_idd4rkuc_
Class classd — Alpha and beta proteins (a+b)
Fold Fold foldd.58 — Ferredoxin-like
Superfamily Superfamily superfamilyd.58.1 — 4Fe-4S ferredoxins
Family Family familyd.58.1.2 — 7-Fe ferredoxin
Domain ID domain_idd4rkud_
Class classd — Alpha and beta proteins (a+b)
Fold Fold foldd.187 — Photosystem I subunit PsaD
Superfamily Superfamily superfamilyd.187.1 — Photosystem I subunit PsaD
Family Family familyd.187.1.1 — Photosystem I subunit PsaD
Domain ID domain_idd4rkue_
Class classb — All beta proteins
Fold Fold foldb.34 — SH3-like barrel
Superfamily Superfamily superfamilyb.34.4 — Electron transport accessory proteins
Family Family familyb.34.4.0 — automated matches
Domain ID domain_idd4rkuf_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.23 — Single transmembrane helix
Superfamily Superfamily superfamilyf.23.16 — Subunit III of photosystem I reaction centre, PsaF
Family Family familyf.23.16.0 — automated matches
Domain ID domain_idd4rkuj_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.23 — Single transmembrane helix
Superfamily Superfamily superfamilyf.23.18 — Subunit IX of photosystem I reaction centre, PsaJ
Family Family familyf.23.18.0 — automated matches
Domain ID domain_idd4rkul_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.31 — Photosystem I reaction center subunit XI, PsaL
Superfamily Superfamily superfamilyf.31.1 — Photosystem I reaction center subunit XI, PsaL
Family Family familyf.31.1.0 — automated matches

CATH v4.4 (8 domains)

Domain ID domain_id4rkuA00
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology1130 — Photosystem I p700 chlorophyll A apoprotein A1
Homologous superfamily homologous superfamily10 — Photosystem I PsaA/PsaB
Domain ID domain_id4rkuB00
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology1130 — Photosystem I p700 chlorophyll A apoprotein A1
Homologous superfamily homologous superfamily10 — Photosystem I PsaA/PsaB
Domain ID domain_id4rkuC00
Class class3 — Alpha Beta
Architecture architecture30 — 2-Layer Sandwich
Topology topology70 — Alpha-Beta Plaits
Homologous superfamily homologous superfamily20 —
Domain ID domain_id4rkuD00
Class class3 — Alpha Beta
Architecture architecture30 — 2-Layer Sandwich
Topology topology1470 — Photosystem 1 Reaction Centre Subunit Ii; Chain: D;
Homologous superfamily homologous superfamily10 — Photosystem I PsaD, reaction center subunit II
Domain ID domain_id4rkuE00
Class class2 — Mainly Beta
Architecture architecture30 — Roll
Topology topology30 — SH3 type barrels.
Homologous superfamily homologous superfamily50 —
Domain ID domain_id4rkuF00
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology8 — Helicase, Ruva Protein; domain 3
Homologous superfamily homologous superfamily110 — Photosystem I, reaction centre, subunit PsaF
Domain ID domain_id4rkuJ00
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology5 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces
Homologous superfamily homologous superfamily510 — Single helix bin
Domain ID domain_id4rkuL00
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology1240 — Photosystem 1 Reaction Centre Subunit Xi; Chain: L;
Homologous superfamily homologous superfamily10 — Photosystem I PsaL, reaction centre subunit XI
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7. Citations (1)