5iv7

Cryo-electron microscopy structure of the star-shaped, hubless post-attachment T4 baseplate

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Baseplate wedge protein gp6

OrganismNot specified

UniProt P19060

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 96 Baseplate wedge protein gp7 × 6 (P19061) Baseplate wedge protein gp8 × 12 (P19062) Baseplate wedge protein gp9 × 18 (P10927) Baseplate wedge protein gp10 × 18 (P10928) Baseplate wedge protein gp11 × 18 (P10929) Baseplate wedge protein gp25 × 6 (P09425) Baseplate wedge protein gp53 × 6 (P16011) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BP06_BPT4
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–660; UniProt 1–660 Author chain B; PDBConstruct 1–660; UniProt 1–660 Author chain BF; PDBConstruct 1–660; UniProt 1–660 Author chain BG; PDBConstruct 1–660; UniProt 1–660 Author chain EA; PDBConstruct 1–660; UniProt 1–660 Author chain EB; PDBConstruct 1–660; UniProt 1–660 Author chain Q; PDBConstruct 1–660; UniProt 1–660 Author chain R; PDBConstruct 1–660; UniProt 1–660 Author chain g; PDBConstruct 1–660; UniProt 1–660 Author chain h; PDBConstruct 1–660; UniProt 1–660 Author chain w; PDBConstruct 1–660; UniProt 1–660 Author chain x; PDBConstruct 1–660; UniProt 1–660

Baseplate wedge protein gp7

OrganismNot specified

UniProt P19061

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 96 Baseplate wedge protein gp6 × 12 (P19060) Baseplate wedge protein gp8 × 12 (P19062) Baseplate wedge protein gp9 × 18 (P10927) Baseplate wedge protein gp10 × 18 (P10928) Baseplate wedge protein gp11 × 18 (P10929) Baseplate wedge protein gp25 × 6 (P09425) Baseplate wedge protein gp53 × 6 (P16011) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BP07_BPT4
Isoform —
PDB entities 2
Chains and sequence ranges Author chain C; PDBConstruct 1–1032; UniProt 1–1032 Author chain CA; PDBConstruct 1–1032; UniProt 1–1032 Author chain EC; PDBConstruct 1–1032; UniProt 1–1032 Author chain S; PDBConstruct 1–1032; UniProt 1–1032 Author chain i; PDBConstruct 1–1032; UniProt 1–1032 Author chain y; PDBConstruct 1–1032; UniProt 1–1032

Baseplate wedge protein gp8

OrganismNot specified

UniProt P19062

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 96 Baseplate wedge protein gp6 × 12 (P19060) Baseplate wedge protein gp7 × 6 (P19061) Baseplate wedge protein gp9 × 18 (P10927) Baseplate wedge protein gp10 × 18 (P10928) Baseplate wedge protein gp11 × 18 (P10929) Baseplate wedge protein gp25 × 6 (P09425) Baseplate wedge protein gp53 × 6 (P16011) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BP08_BPT4
Isoform —
PDB entities 3
Chains and sequence ranges Author chain AA; PDBConstruct 1–334; UniProt 1–334 Author chain CB; PDBConstruct 1–334; UniProt 1–334 Author chain CC; PDBConstruct 1–334; UniProt 1–334 Author chain D; PDBConstruct 1–334; UniProt 1–334 Author chain E; PDBConstruct 1–334; UniProt 1–334 Author chain ED; PDBConstruct 1–334; UniProt 1–334 Author chain EE; PDBConstruct 1–334; UniProt 1–334 Author chain T; PDBConstruct 1–334; UniProt 1–334 Author chain U; PDBConstruct 1–334; UniProt 1–334 Author chain j; PDBConstruct 1–334; UniProt 1–334 Author chain k; PDBConstruct 1–334; UniProt 1–334 Author chain z; PDBConstruct 1–334; UniProt 1–334

Baseplate wedge protein gp9

OrganismNot specified

UniProt P10927

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 96 Baseplate wedge protein gp6 × 12 (P19060) Baseplate wedge protein gp7 × 6 (P19061) Baseplate wedge protein gp8 × 12 (P19062) Baseplate wedge protein gp10 × 18 (P10928) Baseplate wedge protein gp11 × 18 (P10929) Baseplate wedge protein gp25 × 6 (P09425) Baseplate wedge protein gp53 × 6 (P16011) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BP09_BPT4
Isoform —
PDB entities 4
Chains and sequence ranges Author chain AB; PDBConstruct 1–288; UniProt 1–288 Author chain AC; PDBConstruct 1–288; UniProt 1–288 Author chain AD; PDBConstruct 1–288; UniProt 1–288 Author chain CD; PDBConstruct 1–288; UniProt 1–288 Author chain CE; PDBConstruct 1–288; UniProt 1–288 Author chain CF; PDBConstruct 1–288; UniProt 1–288 Author chain EF; PDBConstruct 1–288; UniProt 1–288 Author chain EG; PDBConstruct 1–288; UniProt 1–288 Author chain F; PDBConstruct 1–288; UniProt 1–288 Author chain FA; PDBConstruct 1–288; UniProt 1–288 Author chain G; PDBConstruct 1–288; UniProt 1–288 Author chain H; PDBConstruct 1–288; UniProt 1–288 Author chain V; PDBConstruct 1–288; UniProt 1–288 Author chain W; PDBConstruct 1–288; UniProt 1–288 Author chain X; PDBConstruct 1–288; UniProt 1–288 Author chain l; PDBConstruct 1–288; UniProt 1–288 Author chain m; PDBConstruct 1–288; UniProt 1–288 Author chain n; PDBConstruct 1–288; UniProt 1–288

Baseplate wedge protein gp10

OrganismNot specified

UniProt P10928

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 96 Baseplate wedge protein gp6 × 12 (P19060) Baseplate wedge protein gp7 × 6 (P19061) Baseplate wedge protein gp8 × 12 (P19062) Baseplate wedge protein gp9 × 18 (P10927) Baseplate wedge protein gp11 × 18 (P10929) Baseplate wedge protein gp25 × 6 (P09425) Baseplate wedge protein gp53 × 6 (P16011) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BP10_BPT4
Isoform —
PDB entities 5
Chains and sequence ranges Author chain AE; PDBConstruct 1–602; UniProt 1–602 Author chain AF; PDBConstruct 1–602; UniProt 1–602 Author chain AG; PDBConstruct 1–602; UniProt 1–602 Author chain CG; PDBConstruct 1–602; UniProt 1–602 Author chain DA; PDBConstruct 1–602; UniProt 1–602 Author chain DB; PDBConstruct 1–602; UniProt 1–602 Author chain FB; PDBConstruct 1–602; UniProt 1–602 Author chain FC; PDBConstruct 1–602; UniProt 1–602 Author chain FD; PDBConstruct 1–602; UniProt 1–602 Author chain I; PDBConstruct 1–602; UniProt 1–602 Author chain J; PDBConstruct 1–602; UniProt 1–602 Author chain K; PDBConstruct 1–602; UniProt 1–602 Author chain Y; PDBConstruct 1–602; UniProt 1–602 Author chain Z; PDBConstruct 1–602; UniProt 1–602 Author chain a; PDBConstruct 1–602; UniProt 1–602 Author chain o; PDBConstruct 1–602; UniProt 1–602 Author chain p; PDBConstruct 1–602; UniProt 1–602 Author chain q; PDBConstruct 1–602; UniProt 1–602

Baseplate wedge protein gp11

OrganismNot specified

UniProt P10929

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 96 Baseplate wedge protein gp6 × 12 (P19060) Baseplate wedge protein gp7 × 6 (P19061) Baseplate wedge protein gp8 × 12 (P19062) Baseplate wedge protein gp9 × 18 (P10927) Baseplate wedge protein gp10 × 18 (P10928) Baseplate wedge protein gp25 × 6 (P09425) Baseplate wedge protein gp53 × 6 (P16011) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BP11_BPT4
Isoform —
PDB entities 6
Chains and sequence ranges Author chain BA; PDBConstruct 1–219; UniProt 1–219 Author chain BB; PDBConstruct 1–219; UniProt 1–219 Author chain BC; PDBConstruct 1–219; UniProt 1–219 Author chain DC; PDBConstruct 1–219; UniProt 1–219 Author chain DD; PDBConstruct 1–219; UniProt 1–219 Author chain DE; PDBConstruct 1–219; UniProt 1–219 Author chain FE; PDBConstruct 1–219; UniProt 1–219 Author chain FF; PDBConstruct 1–219; UniProt 1–219 Author chain FG; PDBConstruct 1–219; UniProt 1–219 Author chain L; PDBConstruct 1–219; UniProt 1–219 Author chain M; PDBConstruct 1–219; UniProt 1–219 Author chain N; PDBConstruct 1–219; UniProt 1–219 Author chain b; PDBConstruct 1–219; UniProt 1–219 Author chain c; PDBConstruct 1–219; UniProt 1–219 Author chain d; PDBConstruct 1–219; UniProt 1–219 Author chain r; PDBConstruct 1–219; UniProt 1–219 Author chain s; PDBConstruct 1–219; UniProt 1–219 Author chain t; PDBConstruct 1–219; UniProt 1–219

Baseplate wedge protein gp25

OrganismNot specified

UniProt P09425

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 96 Baseplate wedge protein gp6 × 12 (P19060) Baseplate wedge protein gp7 × 6 (P19061) Baseplate wedge protein gp8 × 12 (P19062) Baseplate wedge protein gp9 × 18 (P10927) Baseplate wedge protein gp10 × 18 (P10928) Baseplate wedge protein gp11 × 18 (P10929) Baseplate wedge protein gp53 × 6 (P16011) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BP25_BPT4
Isoform —
PDB entities 7
Chains and sequence ranges Author chain BD; PDBConstruct 1–132; UniProt 1–132 Author chain DF; PDBConstruct 1–132; UniProt 1–132 Author chain GA; PDBConstruct 1–132; UniProt 1–132 Author chain O; PDBConstruct 1–132; UniProt 1–132 Author chain e; PDBConstruct 1–132; UniProt 1–132 Author chain u; PDBConstruct 1–132; UniProt 1–132

Baseplate wedge protein gp53

OrganismNot specified

UniProt P16011

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 96 Baseplate wedge protein gp6 × 12 (P19060) Baseplate wedge protein gp7 × 6 (P19061) Baseplate wedge protein gp8 × 12 (P19062) Baseplate wedge protein gp9 × 18 (P10927) Baseplate wedge protein gp10 × 18 (P10928) Baseplate wedge protein gp11 × 18 (P10929) Baseplate wedge protein gp25 × 6 (P09425) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BP53_BPT4
Isoform —
PDB entities 8
Chains and sequence ranges Author chain BE; PDBConstruct 1–196; UniProt 1–196 Author chain DG; PDBConstruct 1–196; UniProt 1–196 Author chain GB; PDBConstruct 1–196; UniProt 1–196 Author chain P; PDBConstruct 1–196; UniProt 1–196 Author chain f; PDBConstruct 1–196; UniProt 1–196 Author chain v; PDBConstruct 1–196; UniProt 1–196

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id5iv7
Deposition date deposition_date2016-03-19
Structure title titleCryo-electron microscopy structure of the star-shaped, hubless post-attachment T4 baseplate
Keywords keywords;T4, baseplate, post-attachment, bacteriophage, bacterial virus, star-shaped, hubless, membrane-piercing, cell attachment, infection, Viral protein ;; VIRAL PROTEIN
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

5iv7__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

5iv7__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 1010 1011 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

5iv7__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)0.00 Å
Rg (electron density)177.40 Å
Total Rg177.40 Å
Atom count312210
Residues39678
Excluded volume5520700 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 5iv7__assembly_1__model_1 96-meric (96) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (8)

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7. Citations (1)