5iv5

Cryo-electron microscopy structure of the hexagonal pre-attachment T4 baseplate-tail tube complex

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Baseplate wedge protein gp6

OrganismNot specified

UniProt P19060

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 145 Baseplate wedge protein gp7 × 6 (P19061) Baseplate wedge protein gp8 × 12 (P19062) Baseplate wedge protein gp9 × 18 (P10927) Baseplate wedge protein gp10 × 18 (P10928) Baseplate wedge protein gp11 × 18 (P10929) Short tail fiber protein gp12 × 18 (P10930) Tail tube protein gp19 × 12 (P13333) Baseplate wedge protein gp25 × 6 (P09425) Baseplate tail-tube protein gp48 × 6 (P13339) Baseplate wedge protein gp53 × 6 (P16011) Baseplate tail-tube protein gp54 × 6 (P13341) Peptidoglycan hydrolase gp5 × 3 (P16009) Baseplate hub protein gp27 × 3 (P17172) Uncharacterized 10.2 kDa protein in segC-Gp6 intergenic region × 1 (P39234) ZINC ION × 6 FE (III) ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BP06_BPT4
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–660; UniProt 1–660 Author chain B; PDBConstruct 1–660; UniProt 1–660 Author chain BH; PDBConstruct 1–660; UniProt 1–660 Author chain BI; PDBConstruct 1–660; UniProt 1–660 Author chain EA; PDBConstruct 1–660; UniProt 1–660 Author chain EB; PDBConstruct 1–660; UniProt 1–660 Author chain GD; PDBConstruct 1–660; UniProt 1–660 Author chain GE; PDBConstruct 1–660; UniProt 1–660 Author chain X; PDBConstruct 1–660; UniProt 1–660 Author chain Y; PDBConstruct 1–660; UniProt 1–660 Author chain u; PDBConstruct 1–660; UniProt 1–660 Author chain v; PDBConstruct 1–660; UniProt 1–660

Baseplate wedge protein gp7

OrganismNot specified

UniProt P19061

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 145 Baseplate wedge protein gp6 × 12 (P19060) Baseplate wedge protein gp8 × 12 (P19062) Baseplate wedge protein gp9 × 18 (P10927) Baseplate wedge protein gp10 × 18 (P10928) Baseplate wedge protein gp11 × 18 (P10929) Short tail fiber protein gp12 × 18 (P10930) Tail tube protein gp19 × 12 (P13333) Baseplate wedge protein gp25 × 6 (P09425) Baseplate tail-tube protein gp48 × 6 (P13339) Baseplate wedge protein gp53 × 6 (P16011) Baseplate tail-tube protein gp54 × 6 (P13341) Peptidoglycan hydrolase gp5 × 3 (P16009) Baseplate hub protein gp27 × 3 (P17172) Uncharacterized 10.2 kDa protein in segC-Gp6 intergenic region × 1 (P39234) ZINC ION × 6 FE (III) ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BP07_BPT4
Isoform —
PDB entities 2
Chains and sequence ranges Author chain BJ; PDBConstruct 1–1032; UniProt 1–1032 Author chain C; PDBConstruct 1–1032; UniProt 1–1032 Author chain EC; PDBConstruct 1–1032; UniProt 1–1032 Author chain GF; PDBConstruct 1–1032; UniProt 1–1032 Author chain Z; PDBConstruct 1–1032; UniProt 1–1032 Author chain w; PDBConstruct 1–1032; UniProt 1–1032

Baseplate wedge protein gp8

OrganismNot specified

UniProt P19062

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 145 Baseplate wedge protein gp6 × 12 (P19060) Baseplate wedge protein gp7 × 6 (P19061) Baseplate wedge protein gp9 × 18 (P10927) Baseplate wedge protein gp10 × 18 (P10928) Baseplate wedge protein gp11 × 18 (P10929) Short tail fiber protein gp12 × 18 (P10930) Tail tube protein gp19 × 12 (P13333) Baseplate wedge protein gp25 × 6 (P09425) Baseplate tail-tube protein gp48 × 6 (P13339) Baseplate wedge protein gp53 × 6 (P16011) Baseplate tail-tube protein gp54 × 6 (P13341) Peptidoglycan hydrolase gp5 × 3 (P16009) Baseplate hub protein gp27 × 3 (P17172) Uncharacterized 10.2 kDa protein in segC-Gp6 intergenic region × 1 (P39234) ZINC ION × 6 FE (III) ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BP08_BPT4
Isoform —
PDB entities 3
Chains and sequence ranges Author chain CA; PDBConstruct 1–334; UniProt 1–334 Author chain CB; PDBConstruct 1–334; UniProt 1–334 Author chain D; PDBConstruct 1–334; UniProt 1–334 Author chain E; PDBConstruct 1–334; UniProt 1–334 Author chain ED; PDBConstruct 1–334; UniProt 1–334 Author chain EE; PDBConstruct 1–334; UniProt 1–334 Author chain GG; PDBConstruct 1–334; UniProt 1–334 Author chain GH; PDBConstruct 1–334; UniProt 1–334 Author chain a; PDBConstruct 1–334; UniProt 1–334 Author chain b; PDBConstruct 1–334; UniProt 1–334 Author chain x; PDBConstruct 1–334; UniProt 1–334 Author chain y; PDBConstruct 1–334; UniProt 1–334

Baseplate wedge protein gp9

OrganismNot specified

UniProt P10927

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 145 Baseplate wedge protein gp6 × 12 (P19060) Baseplate wedge protein gp7 × 6 (P19061) Baseplate wedge protein gp8 × 12 (P19062) Baseplate wedge protein gp10 × 18 (P10928) Baseplate wedge protein gp11 × 18 (P10929) Short tail fiber protein gp12 × 18 (P10930) Tail tube protein gp19 × 12 (P13333) Baseplate wedge protein gp25 × 6 (P09425) Baseplate tail-tube protein gp48 × 6 (P13339) Baseplate wedge protein gp53 × 6 (P16011) Baseplate tail-tube protein gp54 × 6 (P13341) Peptidoglycan hydrolase gp5 × 3 (P16009) Baseplate hub protein gp27 × 3 (P17172) Uncharacterized 10.2 kDa protein in segC-Gp6 intergenic region × 1 (P39234) ZINC ION × 6 FE (III) ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BP09_BPT4
Isoform —
PDB entities 4
Chains and sequence ranges Author chain AA; PDBConstruct 1–288; UniProt 1–288 Author chain AB; PDBConstruct 1–288; UniProt 1–288 Author chain CC; PDBConstruct 1–288; UniProt 1–288 Author chain CD; PDBConstruct 1–288; UniProt 1–288 Author chain CE; PDBConstruct 1–288; UniProt 1–288 Author chain EF; PDBConstruct 1–288; UniProt 1–288 Author chain EG; PDBConstruct 1–288; UniProt 1–288 Author chain EH; PDBConstruct 1–288; UniProt 1–288 Author chain F; PDBConstruct 1–288; UniProt 1–288 Author chain G; PDBConstruct 1–288; UniProt 1–288 Author chain GI; PDBConstruct 1–288; UniProt 1–288 Author chain GJ; PDBConstruct 1–288; UniProt 1–288 Author chain H; PDBConstruct 1–288; UniProt 1–288 Author chain HA; PDBConstruct 1–288; UniProt 1–288 Author chain c; PDBConstruct 1–288; UniProt 1–288 Author chain d; PDBConstruct 1–288; UniProt 1–288 Author chain e; PDBConstruct 1–288; UniProt 1–288 Author chain z; PDBConstruct 1–288; UniProt 1–288

Baseplate wedge protein gp10

OrganismNot specified

UniProt P10928

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 145 Baseplate wedge protein gp6 × 12 (P19060) Baseplate wedge protein gp7 × 6 (P19061) Baseplate wedge protein gp8 × 12 (P19062) Baseplate wedge protein gp9 × 18 (P10927) Baseplate wedge protein gp11 × 18 (P10929) Short tail fiber protein gp12 × 18 (P10930) Tail tube protein gp19 × 12 (P13333) Baseplate wedge protein gp25 × 6 (P09425) Baseplate tail-tube protein gp48 × 6 (P13339) Baseplate wedge protein gp53 × 6 (P16011) Baseplate tail-tube protein gp54 × 6 (P13341) Peptidoglycan hydrolase gp5 × 3 (P16009) Baseplate hub protein gp27 × 3 (P17172) Uncharacterized 10.2 kDa protein in segC-Gp6 intergenic region × 1 (P39234) ZINC ION × 6 FE (III) ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BP10_BPT4
Isoform —
PDB entities 5
Chains and sequence ranges Author chain AC; PDBConstruct 1–602; UniProt 1–602 Author chain AD; PDBConstruct 1–602; UniProt 1–602 Author chain AE; PDBConstruct 1–602; UniProt 1–602 Author chain CF; PDBConstruct 1–602; UniProt 1–602 Author chain CG; PDBConstruct 1–602; UniProt 1–602 Author chain CH; PDBConstruct 1–602; UniProt 1–602 Author chain EI; PDBConstruct 1–602; UniProt 1–602 Author chain EJ; PDBConstruct 1–602; UniProt 1–602 Author chain FA; PDBConstruct 1–602; UniProt 1–602 Author chain HB; PDBConstruct 1–602; UniProt 1–602 Author chain HC; PDBConstruct 1–602; UniProt 1–602 Author chain HD; PDBConstruct 1–602; UniProt 1–602 Author chain I; PDBConstruct 1–602; UniProt 1–602 Author chain J; PDBConstruct 1–602; UniProt 1–602 Author chain K; PDBConstruct 1–602; UniProt 1–602 Author chain f; PDBConstruct 1–602; UniProt 1–602 Author chain g; PDBConstruct 1–602; UniProt 1–602 Author chain h; PDBConstruct 1–602; UniProt 1–602

Baseplate wedge protein gp11

OrganismNot specified

UniProt P10929

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 145 Baseplate wedge protein gp6 × 12 (P19060) Baseplate wedge protein gp7 × 6 (P19061) Baseplate wedge protein gp8 × 12 (P19062) Baseplate wedge protein gp9 × 18 (P10927) Baseplate wedge protein gp10 × 18 (P10928) Short tail fiber protein gp12 × 18 (P10930) Tail tube protein gp19 × 12 (P13333) Baseplate wedge protein gp25 × 6 (P09425) Baseplate tail-tube protein gp48 × 6 (P13339) Baseplate wedge protein gp53 × 6 (P16011) Baseplate tail-tube protein gp54 × 6 (P13341) Peptidoglycan hydrolase gp5 × 3 (P16009) Baseplate hub protein gp27 × 3 (P17172) Uncharacterized 10.2 kDa protein in segC-Gp6 intergenic region × 1 (P39234) ZINC ION × 6 FE (III) ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BP11_BPT4
Isoform —
PDB entities 6
Chains and sequence ranges Author chain AF; PDBConstruct 1–219; UniProt 1–219 Author chain AG; PDBConstruct 1–219; UniProt 1–219 Author chain AH; PDBConstruct 1–219; UniProt 1–219 Author chain CI; PDBConstruct 1–219; UniProt 1–219 Author chain CJ; PDBConstruct 1–219; UniProt 1–219 Author chain DA; PDBConstruct 1–219; UniProt 1–219 Author chain FB; PDBConstruct 1–219; UniProt 1–219 Author chain FC; PDBConstruct 1–219; UniProt 1–219 Author chain FD; PDBConstruct 1–219; UniProt 1–219 Author chain HE; PDBConstruct 1–219; UniProt 1–219 Author chain HF; PDBConstruct 1–219; UniProt 1–219 Author chain HG; PDBConstruct 1–219; UniProt 1–219 Author chain L; PDBConstruct 1–219; UniProt 1–219 Author chain M; PDBConstruct 1–219; UniProt 1–219 Author chain N; PDBConstruct 1–219; UniProt 1–219 Author chain i; PDBConstruct 1–219; UniProt 1–219 Author chain j; PDBConstruct 1–219; UniProt 1–219 Author chain k; PDBConstruct 1–219; UniProt 1–219

Short tail fiber protein gp12

OrganismNot specified

UniProt P10930

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 145 Baseplate wedge protein gp6 × 12 (P19060) Baseplate wedge protein gp7 × 6 (P19061) Baseplate wedge protein gp8 × 12 (P19062) Baseplate wedge protein gp9 × 18 (P10927) Baseplate wedge protein gp10 × 18 (P10928) Baseplate wedge protein gp11 × 18 (P10929) Tail tube protein gp19 × 12 (P13333) Baseplate wedge protein gp25 × 6 (P09425) Baseplate tail-tube protein gp48 × 6 (P13339) Baseplate wedge protein gp53 × 6 (P16011) Baseplate tail-tube protein gp54 × 6 (P13341) Peptidoglycan hydrolase gp5 × 3 (P16009) Baseplate hub protein gp27 × 3 (P17172) Uncharacterized 10.2 kDa protein in segC-Gp6 intergenic region × 1 (P39234) ZINC ION × 6 FE (III) ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name FIB12_BPT4
Isoform —
PDB entities 7
Chains and sequence ranges Author chain AI; PDBConstruct 1–527; UniProt 1–527 Author chain AJ; PDBConstruct 1–527; UniProt 1–527 Author chain BA; PDBConstruct 1–527; UniProt 1–527 Author chain DB; PDBConstruct 1–527; UniProt 1–527 Author chain DC; PDBConstruct 1–527; UniProt 1–527 Author chain DD; PDBConstruct 1–527; UniProt 1–527 Author chain FE; PDBConstruct 1–527; UniProt 1–527 Author chain FF; PDBConstruct 1–527; UniProt 1–527 Author chain FG; PDBConstruct 1–527; UniProt 1–527 Author chain HH; PDBConstruct 1–527; UniProt 1–527 Author chain HI; PDBConstruct 1–527; UniProt 1–527 Author chain HJ; PDBConstruct 1–527; UniProt 1–527 Author chain O; PDBConstruct 1–527; UniProt 1–527 Author chain P; PDBConstruct 1–527; UniProt 1–527 Author chain Q; PDBConstruct 1–527; UniProt 1–527 Author chain l; PDBConstruct 1–527; UniProt 1–527 Author chain m; PDBConstruct 1–527; UniProt 1–527 Author chain n; PDBConstruct 1–527; UniProt 1–527

Tail tube protein gp19

OrganismNot specified

UniProt P13333

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 145 Baseplate wedge protein gp6 × 12 (P19060) Baseplate wedge protein gp7 × 6 (P19061) Baseplate wedge protein gp8 × 12 (P19062) Baseplate wedge protein gp9 × 18 (P10927) Baseplate wedge protein gp10 × 18 (P10928) Baseplate wedge protein gp11 × 18 (P10929) Short tail fiber protein gp12 × 18 (P10930) Baseplate wedge protein gp25 × 6 (P09425) Baseplate tail-tube protein gp48 × 6 (P13339) Baseplate wedge protein gp53 × 6 (P16011) Baseplate tail-tube protein gp54 × 6 (P13341) Peptidoglycan hydrolase gp5 × 3 (P16009) Baseplate hub protein gp27 × 3 (P17172) Uncharacterized 10.2 kDa protein in segC-Gp6 intergenic region × 1 (P39234) ZINC ION × 6 FE (III) ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TUBE_BPT4
Isoform —
PDB entities 8
Chains and sequence ranges Author chain BB; PDBConstruct 1–163; UniProt 1–163 Author chain BC; PDBConstruct 1–163; UniProt 1–163 Author chain DE; PDBConstruct 1–163; UniProt 1–163 Author chain DF; PDBConstruct 1–163; UniProt 1–163 Author chain FH; PDBConstruct 1–163; UniProt 1–163 Author chain FI; PDBConstruct 1–163; UniProt 1–163 Author chain IA; PDBConstruct 1–163; UniProt 1–163 Author chain IB; PDBConstruct 1–163; UniProt 1–163 Author chain R; PDBConstruct 1–163; UniProt 1–163 Author chain S; PDBConstruct 1–163; UniProt 1–163 Author chain o; PDBConstruct 1–163; UniProt 1–163 Author chain p; PDBConstruct 1–163; UniProt 1–163

Baseplate wedge protein gp25

OrganismNot specified

UniProt P09425

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 145 Baseplate wedge protein gp6 × 12 (P19060) Baseplate wedge protein gp7 × 6 (P19061) Baseplate wedge protein gp8 × 12 (P19062) Baseplate wedge protein gp9 × 18 (P10927) Baseplate wedge protein gp10 × 18 (P10928) Baseplate wedge protein gp11 × 18 (P10929) Short tail fiber protein gp12 × 18 (P10930) Tail tube protein gp19 × 12 (P13333) Baseplate tail-tube protein gp48 × 6 (P13339) Baseplate wedge protein gp53 × 6 (P16011) Baseplate tail-tube protein gp54 × 6 (P13341) Peptidoglycan hydrolase gp5 × 3 (P16009) Baseplate hub protein gp27 × 3 (P17172) Uncharacterized 10.2 kDa protein in segC-Gp6 intergenic region × 1 (P39234) ZINC ION × 6 FE (III) ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BP25_BPT4
Isoform —
PDB entities 9
Chains and sequence ranges Author chain BD; PDBConstruct 1–132; UniProt 1–132 Author chain DG; PDBConstruct 1–132; UniProt 1–132 Author chain FJ; PDBConstruct 1–132; UniProt 1–132 Author chain IC; PDBConstruct 1–132; UniProt 1–132 Author chain T; PDBConstruct 1–132; UniProt 1–132 Author chain q; PDBConstruct 1–132; UniProt 1–132

Baseplate tail-tube protein gp48

OrganismNot specified

UniProt P13339

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 145 Baseplate wedge protein gp6 × 12 (P19060) Baseplate wedge protein gp7 × 6 (P19061) Baseplate wedge protein gp8 × 12 (P19062) Baseplate wedge protein gp9 × 18 (P10927) Baseplate wedge protein gp10 × 18 (P10928) Baseplate wedge protein gp11 × 18 (P10929) Short tail fiber protein gp12 × 18 (P10930) Tail tube protein gp19 × 12 (P13333) Baseplate wedge protein gp25 × 6 (P09425) Baseplate wedge protein gp53 × 6 (P16011) Baseplate tail-tube protein gp54 × 6 (P13341) Peptidoglycan hydrolase gp5 × 3 (P16009) Baseplate hub protein gp27 × 3 (P17172) Uncharacterized 10.2 kDa protein in segC-Gp6 intergenic region × 1 (P39234) ZINC ION × 6 FE (III) ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BP48_BPT4
Isoform —
PDB entities 10
Chains and sequence ranges Author chain BE; PDBConstruct 1–364; UniProt 1–364 Author chain DH; PDBConstruct 1–364; UniProt 1–364 Author chain GA; PDBConstruct 1–364; UniProt 1–364 Author chain ID; PDBConstruct 1–364; UniProt 1–364 Author chain U; PDBConstruct 1–364; UniProt 1–364 Author chain r; PDBConstruct 1–364; UniProt 1–364

Baseplate wedge protein gp53

OrganismNot specified

UniProt P16011

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 145 Baseplate wedge protein gp6 × 12 (P19060) Baseplate wedge protein gp7 × 6 (P19061) Baseplate wedge protein gp8 × 12 (P19062) Baseplate wedge protein gp9 × 18 (P10927) Baseplate wedge protein gp10 × 18 (P10928) Baseplate wedge protein gp11 × 18 (P10929) Short tail fiber protein gp12 × 18 (P10930) Tail tube protein gp19 × 12 (P13333) Baseplate wedge protein gp25 × 6 (P09425) Baseplate tail-tube protein gp48 × 6 (P13339) Baseplate tail-tube protein gp54 × 6 (P13341) Peptidoglycan hydrolase gp5 × 3 (P16009) Baseplate hub protein gp27 × 3 (P17172) Uncharacterized 10.2 kDa protein in segC-Gp6 intergenic region × 1 (P39234) ZINC ION × 6 FE (III) ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BP53_BPT4
Isoform —
PDB entities 11
Chains and sequence ranges Author chain BF; PDBConstruct 1–196; UniProt 1–196 Author chain DI; PDBConstruct 1–196; UniProt 1–196 Author chain GB; PDBConstruct 1–196; UniProt 1–196 Author chain IE; PDBConstruct 1–196; UniProt 1–196 Author chain V; PDBConstruct 1–196; UniProt 1–196 Author chain s; PDBConstruct 1–196; UniProt 1–196

Baseplate tail-tube protein gp54

OrganismNot specified

UniProt P13341

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 145 Baseplate wedge protein gp6 × 12 (P19060) Baseplate wedge protein gp7 × 6 (P19061) Baseplate wedge protein gp8 × 12 (P19062) Baseplate wedge protein gp9 × 18 (P10927) Baseplate wedge protein gp10 × 18 (P10928) Baseplate wedge protein gp11 × 18 (P10929) Short tail fiber protein gp12 × 18 (P10930) Tail tube protein gp19 × 12 (P13333) Baseplate wedge protein gp25 × 6 (P09425) Baseplate tail-tube protein gp48 × 6 (P13339) Baseplate wedge protein gp53 × 6 (P16011) Peptidoglycan hydrolase gp5 × 3 (P16009) Baseplate hub protein gp27 × 3 (P17172) Uncharacterized 10.2 kDa protein in segC-Gp6 intergenic region × 1 (P39234) ZINC ION × 6 FE (III) ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BP54_BPT4
Isoform —
PDB entities 12
Chains and sequence ranges Author chain BG; PDBConstruct 1–320; UniProt 1–320 Author chain DJ; PDBConstruct 1–320; UniProt 1–320 Author chain GC; PDBConstruct 1–320; UniProt 1–320 Author chain IF; PDBConstruct 1–320; UniProt 1–320 Author chain W; PDBConstruct 1–320; UniProt 1–320 Author chain t; PDBConstruct 1–320; UniProt 1–320

Peptidoglycan hydrolase gp5

OrganismNot specified

UniProt P16009

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 145 Baseplate wedge protein gp6 × 12 (P19060) Baseplate wedge protein gp7 × 6 (P19061) Baseplate wedge protein gp8 × 12 (P19062) Baseplate wedge protein gp9 × 18 (P10927) Baseplate wedge protein gp10 × 18 (P10928) Baseplate wedge protein gp11 × 18 (P10929) Short tail fiber protein gp12 × 18 (P10930) Tail tube protein gp19 × 12 (P13333) Baseplate wedge protein gp25 × 6 (P09425) Baseplate tail-tube protein gp48 × 6 (P13339) Baseplate wedge protein gp53 × 6 (P16011) Baseplate tail-tube protein gp54 × 6 (P13341) Baseplate hub protein gp27 × 3 (P17172) Uncharacterized 10.2 kDa protein in segC-Gp6 intergenic region × 1 (P39234) ZINC ION × 6 FE (III) ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NEEDL_BPT4
Isoform —
PDB entities 13
Chains and sequence ranges Author chain YA; PDBConstruct 1–575; UniProt 1–575 Author chain YB; PDBConstruct 1–575; UniProt 1–575 Author chain YC; PDBConstruct 1–575; UniProt 1–575

Baseplate hub protein gp27

OrganismNot specified

UniProt P17172

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 145 Baseplate wedge protein gp6 × 12 (P19060) Baseplate wedge protein gp7 × 6 (P19061) Baseplate wedge protein gp8 × 12 (P19062) Baseplate wedge protein gp9 × 18 (P10927) Baseplate wedge protein gp10 × 18 (P10928) Baseplate wedge protein gp11 × 18 (P10929) Short tail fiber protein gp12 × 18 (P10930) Tail tube protein gp19 × 12 (P13333) Baseplate wedge protein gp25 × 6 (P09425) Baseplate tail-tube protein gp48 × 6 (P13339) Baseplate wedge protein gp53 × 6 (P16011) Baseplate tail-tube protein gp54 × 6 (P13341) Peptidoglycan hydrolase gp5 × 3 (P16009) Uncharacterized 10.2 kDa protein in segC-Gp6 intergenic region × 1 (P39234) ZINC ION × 6 FE (III) ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BP27_BPT4
Isoform —
PDB entities 14
Chains and sequence ranges Author chain YD; PDBConstruct 1–391; UniProt 1–391 Author chain YE; PDBConstruct 1–391; UniProt 1–391 Author chain YF; PDBConstruct 1–391; UniProt 1–391

Uncharacterized 10.2 kDa protein in segC-Gp6 intergenic region

OrganismNot specified

UniProt P39234

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 145 Baseplate wedge protein gp6 × 12 (P19060) Baseplate wedge protein gp7 × 6 (P19061) Baseplate wedge protein gp8 × 12 (P19062) Baseplate wedge protein gp9 × 18 (P10927) Baseplate wedge protein gp10 × 18 (P10928) Baseplate wedge protein gp11 × 18 (P10929) Short tail fiber protein gp12 × 18 (P10930) Tail tube protein gp19 × 12 (P13333) Baseplate wedge protein gp25 × 6 (P09425) Baseplate tail-tube protein gp48 × 6 (P13339) Baseplate wedge protein gp53 × 6 (P16011) Baseplate tail-tube protein gp54 × 6 (P13341) Peptidoglycan hydrolase gp5 × 3 (P16009) Baseplate hub protein gp27 × 3 (P17172) ZINC ION × 6 FE (III) ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name Y08B_BPT4
Isoform —
PDB entities 15
Chains and sequence ranges Author chain ZA; PDBConstruct 1–97; UniProt 1–97

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id5iv5
Deposition date deposition_date2016-03-19
Structure title titleCryo-electron microscopy structure of the hexagonal pre-attachment T4 baseplate-tail tube complex
Keywords keywords;T4, baseplate-tail tube complex, pre-attachment, bacteriophage, bacterial virus, hexagonal, membrane-piercing, cell attachment, infection, Viral protein ;; VIRAL PROTEIN
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

5iv5__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

5iv5__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 1010 1011 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

5iv5__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)0.00 Å
Rg (electron density)166.00 Å
Total Rg166.10 Å
Atom count438116
Residues56082
Excluded volume7733700 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 5iv5__assembly_1__model_1 145-meric (145) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (17)

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7. Citations (1)