Maltose-binding periplasmic protein,Receptor activity-modifying protein 1,Calcitonin gene-related peptide type 1 receptor
Homo sapiens
当前结构中的状态
| Assembly | 聚集状态 | 构建体 | 突变与修饰 | 配体、离子与共同组分 | 实验方法与环境 | 结构质量 |
|---|---|---|---|---|---|---|
| 1 | 信息不足 异源复合物 蛋白 × 2 其他聚合物 1 PDB 声明:dimeric(2) 与蛋白拷贝数一致 | 链 A; UniProt 24–111 | 未记录 | ADM × 1 (P35318) alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 | X-RAY DIFFRACTION X-ray结晶条件:VAPOR DIFFUSION, HANGING DROP;pH 6;293 K;15% PEG3350, 0.1 M Sodium Malonate pH 6.0, 50 mM Potassium/Sodium tartrate, 1% Cadaverine | 分辨率 2.80 Å R-free 0.244 |
| 2 | 信息不足 异源复合物 蛋白 × 2 其他聚合物 1 PDB 声明:dimeric(2) 与蛋白拷贝数一致 | 链 B; UniProt 24–111 | 未记录 | ADM × 1 (P35318) alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 | X-RAY DIFFRACTION X-ray结晶条件:VAPOR DIFFUSION, HANGING DROP;pH 6;293 K;15% PEG3350, 0.1 M Sodium Malonate pH 6.0, 50 mM Potassium/Sodium tartrate, 1% Cadaverine | 分辨率 2.80 Å R-free 0.244 |
| 3 | 信息不足 异源复合物 蛋白 × 2 其他聚合物 1 PDB 声明:dimeric(2) 与蛋白拷贝数一致 | 链 C; UniProt 24–111 | 未记录 | ADM × 1 (P35318) alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 | X-RAY DIFFRACTION X-ray结晶条件:VAPOR DIFFUSION, HANGING DROP;pH 6;293 K;15% PEG3350, 0.1 M Sodium Malonate pH 6.0, 50 mM Potassium/Sodium tartrate, 1% Cadaverine | 分辨率 2.80 Å R-free 0.244 |
| 4 | 信息不足 异源复合物 蛋白 × 2 其他聚合物 1 PDB 声明:dimeric(2) 与蛋白拷贝数一致 | 链 D; UniProt 24–111 | 未记录 | ADM × 1 (P35318) alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 | X-RAY DIFFRACTION X-ray结晶条件:VAPOR DIFFUSION, HANGING DROP;pH 6;293 K;15% PEG3350, 0.1 M Sodium Malonate pH 6.0, 50 mM Potassium/Sodium tartrate, 1% Cadaverine | 分辨率 2.80 Å R-free 0.244 |
数据库中的同蛋白其他状态
以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。
| 其他 PDB | 相对当前条目 5V6Y | Assembly / 聚集状态 | 构建体 | 突变与修饰 | 配体、离子与非聚合物 | 实验方法与环境 | 结构质量 |
|---|---|---|---|---|---|---|---|
| 2YX8 Crystal structure of the extracellular domain of human RAMP1 提交 2007-04-24 | 构建体不同 突变/修饰不同 聚集状态不同 实验环境不同 结构质量不同 | Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric |
链 A
27–112(86 aa)
片段:Extracellular Domain
|
非标准单体:是(mmCIF未提供具体位点) | 未记录非水小分子 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 5.4;293 K;0.1M tri-Sodium Citrate Dihydrate, 0.15M di-Ammonium Citrate, 25% PEG3350, pH 5.4, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.40 Å R-free 0.281 |
| 2YX8 Crystal structure of the extracellular domain of human RAMP1 提交 2007-04-24 | 构建体不同 突变/修饰不同 聚集状态不同 实验环境不同 结构质量不同 | Assembly 2 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric |
链 A
27–112(86 aa)
片段:Extracellular Domain
|
非标准单体:是(mmCIF未提供具体位点) | 未记录非水小分子 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 5.4;293 K;0.1M tri-Sodium Citrate Dihydrate, 0.15M di-Ammonium Citrate, 25% PEG3350, pH 5.4, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.40 Å R-free 0.281 |
| 3N7P Crystal structure of the ectodomain complex of the CGRP receptor, a Class-B GPCR, reveals the site of drug antagonism 提交 2010-05-27 | 构建体不同 聚集状态不同 配体/离子不同 实验环境不同 结构质量不同 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 R
26–117(92 aa)
片段:Extra-cellular domain residues 26-117
|
未记录 | SO4 SULFATE ION × 6 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;1-1.3M ammonium sulfate, 6-8% dioxane, 60-80mM MES pH 6.5, 10mM Tris pH8.5 and 200mM sodium nitrate.
The crystals were transfered to 2.1M NaMalonate (pH 7.0) prior to freezing in liquid nitrogen., VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 2.80 Å R-free 0.241 |
| 3N7P Crystal structure of the ectodomain complex of the CGRP receptor, a Class-B GPCR, reveals the site of drug antagonism 提交 2010-05-27 | 构建体不同 聚集状态不同 配体/离子不同 实验环境不同 结构质量不同 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 D
26–117(92 aa)
片段:Extra-cellular domain residues 26-117
|
未记录 | SO4 SULFATE ION × 6 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;1-1.3M ammonium sulfate, 6-8% dioxane, 60-80mM MES pH 6.5, 10mM Tris pH8.5 and 200mM sodium nitrate.
The crystals were transfered to 2.1M NaMalonate (pH 7.0) prior to freezing in liquid nitrogen., VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 2.80 Å R-free 0.241 |
| 3N7P Crystal structure of the ectodomain complex of the CGRP receptor, a Class-B GPCR, reveals the site of drug antagonism 提交 2010-05-27 | 构建体不同 聚集状态不同 实验环境不同 结构质量不同 | Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 F
26–117(92 aa)
片段:Extra-cellular domain residues 26-117
|
未记录 | 未记录非水小分子 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;1-1.3M ammonium sulfate, 6-8% dioxane, 60-80mM MES pH 6.5, 10mM Tris pH8.5 and 200mM sodium nitrate.
The crystals were transfered to 2.1M NaMalonate (pH 7.0) prior to freezing in liquid nitrogen., VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 2.80 Å R-free 0.241 |
| 3N7P Crystal structure of the ectodomain complex of the CGRP receptor, a Class-B GPCR, reveals the site of drug antagonism 提交 2010-05-27 | 构建体不同 聚集状态不同 配体/离子不同 实验环境不同 结构质量不同 | Assembly 4 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 E
26–117(92 aa)
片段:Extra-cellular domain residues 26-117
|
未记录 | SO4 SULFATE ION × 4 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;1-1.3M ammonium sulfate, 6-8% dioxane, 60-80mM MES pH 6.5, 10mM Tris pH8.5 and 200mM sodium nitrate.
The crystals were transfered to 2.1M NaMalonate (pH 7.0) prior to freezing in liquid nitrogen., VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 2.80 Å R-free 0.241 |
| 3N7R Crystal structure of the ectodomain complex of the CGRP receptor, a Class-B GPCR, reveals the site of drug antagonism 提交 2010-05-27 | 构建体不同 聚集状态不同 配体/离子不同 实验环境不同 结构质量不同 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 D
26–117(92 aa)
片段:Extra-cellular domain residues 26-117
|
未记录 | 3N6 N-{(1S)-5-amino-1-[(4-pyridin-4-ylpiperazin-1-yl)carbonyl]pentyl}-3,5-dibromo-Nalpha-{[4-(2-oxo-1,4-dihydroquinazolin-3 (2H)-yl)piperidin-1-yl]carbonyl}-D-tyrosinamide × 1 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;CLR/RAMP1 complex was mixed with Olcegepant prior to crystallization in a 1:4 (protein : compound) molar ratio. Crystals were obtained by mixing 0.6uL protein with 0.3uL reservoir solution containing 1-1.3M ammonium sulfate, 6-8% dioxane, 60-80mM MES pH 6.5, plus 0.4 M potassium thiocyanate. Telcagepant was soaked into the ligand binding site. The crystal was transferred to 2.1M NaMalonate (pH 7.0) prior to freezing in liquid nitrogen., VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 2.90 Å R-free 0.267 |
| 3N7R Crystal structure of the ectodomain complex of the CGRP receptor, a Class-B GPCR, reveals the site of drug antagonism 提交 2010-05-27 | 构建体不同 聚集状态不同 配体/离子不同 实验环境不同 结构质量不同 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 C
26–117(92 aa)
片段:Extra-cellular domain residues 26-117
|
未记录 | N7R N-[(3R,6S)-6-(2,3-difluorophenyl)-2-oxo-1-(2,2,2-trifluoroethyl)azepan-3-yl]-4-(2-oxo-2,3-dihydro-1H-imidazo[4,5-b]pyridin-1-yl)piperidine-1-carboxamide × 1 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;CLR/RAMP1 complex was mixed with Olcegepant prior to crystallization in a 1:4 (protein : compound) molar ratio. Crystals were obtained by mixing 0.6uL protein with 0.3uL reservoir solution containing 1-1.3M ammonium sulfate, 6-8% dioxane, 60-80mM MES pH 6.5, plus 0.4 M potassium thiocyanate. Telcagepant was soaked into the ligand binding site. The crystal was transferred to 2.1M NaMalonate (pH 7.0) prior to freezing in liquid nitrogen., VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 2.90 Å R-free 0.267 |
| 3N7S Crystal structure of the ectodomain complex of the CGRP receptor, a Class-B GPCR, reveals the site of drug antagonism 提交 2010-05-27 | 构建体不同 聚集状态不同 配体/离子不同 实验环境不同 结构质量不同 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 D
26–117(92 aa)
片段:Extra-cellular domain residues 26-117
|
未记录 | 3N6 N-{(1S)-5-amino-1-[(4-pyridin-4-ylpiperazin-1-yl)carbonyl]pentyl}-3,5-dibromo-Nalpha-{[4-(2-oxo-1,4-dihydroquinazolin-3 (2H)-yl)piperidin-1-yl]carbonyl}-D-tyrosinamide × 1 |
X-RAY DIFFRACTION
X-ray结晶条件
pH 6.5;298 K;CLR/RAMP1 complex was mixed with Olcegepant prior to crystallization in a 1:4 (protein:compound) molar ratio. Crystals were obtained by mixing 0.6uL protein with 0.3uL reservoir solution containing 1-1.3M ammonium sulfate, 6-8% dioxane, 60-80mM MES pH 6.5, 0.4 M potassium thiocyanate. The crystals were transferred to 2.1M NaMalonate (pH 7.0) prior to freezing in liquid nitrogen, hanging drop, temperature 298K
|
分辨率 2.10 Å R-free 0.226 |
| 3N7S Crystal structure of the ectodomain complex of the CGRP receptor, a Class-B GPCR, reveals the site of drug antagonism 提交 2010-05-27 | 构建体不同 聚集状态不同 配体/离子不同 实验环境不同 结构质量不同 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 C
26–117(92 aa)
片段:Extra-cellular domain residues 26-117
|
未记录 | 3N7 N~4~-(5-cyclopropyl-1H-pyrazol-3-yl)-N~2~-1H-indazol-5-yl-6-methylpyrimidine-2,4-diamine × 1 SO4 SULFATE ION × 1 |
X-RAY DIFFRACTION
X-ray结晶条件
pH 6.5;298 K;CLR/RAMP1 complex was mixed with Olcegepant prior to crystallization in a 1:4 (protein:compound) molar ratio. Crystals were obtained by mixing 0.6uL protein with 0.3uL reservoir solution containing 1-1.3M ammonium sulfate, 6-8% dioxane, 60-80mM MES pH 6.5, 0.4 M potassium thiocyanate. The crystals were transferred to 2.1M NaMalonate (pH 7.0) prior to freezing in liquid nitrogen, hanging drop, temperature 298K
|
分辨率 2.10 Å R-free 0.226 |
| 4RWG Crystal structure of the CLR:RAMP1 extracellular domain heterodimer with bound high affinity CGRP analog 提交 2014-12-03 | 构建体不同 实验环境不同 结构质量不同 | Assembly 1 信息不足 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 A
24–108(85 aa)
|
未记录 | 未记录非水小分子 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6;293 K;16% PEG3350, 8% Tacsimate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.44 Å R-free 0.243 |
| 4RWG Crystal structure of the CLR:RAMP1 extracellular domain heterodimer with bound high affinity CGRP analog 提交 2014-12-03 | 构建体不同 配体/离子不同 实验环境不同 结构质量不同 | Assembly 2 信息不足 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 B
24–108(85 aa)
|
未记录 | MG MAGNESIUM ION × 1 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6;293 K;16% PEG3350, 8% Tacsimate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.44 Å R-free 0.243 |
| 4RWG Crystal structure of the CLR:RAMP1 extracellular domain heterodimer with bound high affinity CGRP analog 提交 2014-12-03 | 构建体不同 实验环境不同 结构质量不同 | Assembly 3 信息不足 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 C
24–108(85 aa)
|
未记录 | 未记录非水小分子 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6;293 K;16% PEG3350, 8% Tacsimate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.44 Å R-free 0.243 |
| 6D1U Crystal structure of the human CLR:RAMP1 extracellular domain heterodimer in complex with adrenomedullin 2/intermedin 提交 2018-04-12 | 配体/离子不同 实验环境不同 结构质量不同 | Assembly 1 信息不足 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 A
24–111(88 aa)
|
未记录 | NA SODIUM ION × 1 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;13% v/v PEG 3,350
0.1 M Na cacodylate, pH 6.5
0.15 M DL-malic acid
|
分辨率 2.05 Å R-free 0.223 |
| 6D1U Crystal structure of the human CLR:RAMP1 extracellular domain heterodimer in complex with adrenomedullin 2/intermedin 提交 2018-04-12 | 实验环境不同 结构质量不同 | Assembly 2 信息不足 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 B
24–111(88 aa)
|
未记录 | 未记录非水小分子 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;13% v/v PEG 3,350
0.1 M Na cacodylate, pH 6.5
0.15 M DL-malic acid
|
分辨率 2.05 Å R-free 0.223 |
| 6D1U Crystal structure of the human CLR:RAMP1 extracellular domain heterodimer in complex with adrenomedullin 2/intermedin 提交 2018-04-12 | 配体/离子不同 实验环境不同 结构质量不同 | Assembly 3 信息不足 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 C
24–111(88 aa)
|
未记录 | NA SODIUM ION × 3 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;13% v/v PEG 3,350
0.1 M Na cacodylate, pH 6.5
0.15 M DL-malic acid
|
分辨率 2.05 Å R-free 0.223 |
| 6E3Y Cryo-EM structure of the active, Gs-protein complexed, human CGRP receptor 提交 2018-07-16 | 构建体不同 聚集状态不同 实验方法不同 实验环境不同 结构质量不同 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 7 PDB 声明:heptameric |
链 E
27–148(122 aa)
|
未记录 | 未记录非水小分子 |
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 NITROGEN
|
分辨率 3.30 Å |
| 6UMG Crystal structure of erenumab Fab bound to the extracellular domain of CGRP receptor 提交 2019-10-09 | 构建体不同 聚集状态不同 实验环境不同 结构质量不同 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric |
链 R
26–117(92 aa)
片段:extracellular domain (UNP residues 26-117)
|
未记录 | 未记录非水小分子 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;293 K;0.12 M ethylene glycols, 0.1 M HEPES:MOPS, pH 7.5, 37.5% MPD + PEG1000 + PEG3350
|
分辨率 2.70 Å R-free 0.282 |
| 6UMG Crystal structure of erenumab Fab bound to the extracellular domain of CGRP receptor 提交 2019-10-09 | 构建体不同 聚集状态不同 实验环境不同 结构质量不同 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric |
链 r
26–117(92 aa)
片段:extracellular domain (UNP residues 26-117)
|
未记录 | 未记录非水小分子 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;293 K;0.12 M ethylene glycols, 0.1 M HEPES:MOPS, pH 7.5, 37.5% MPD + PEG1000 + PEG3350
|
分辨率 2.70 Å R-free 0.282 |
| 6ZHO Crystal structure of a CGRP receptor ectodomain heterodimer with bound high affinity inhibitor 提交 2020-06-23 | 聚集状态不同 配体/离子不同 实验环境不同 结构质量不同 | Assembly 1 信息不足 单体;蛋白 × 1 PDB 声明:monomeric |
链 A
24–111(88 aa)
|
未记录 | QLQ ~{N}-[(2~{R})-3-(7-methyl-2~{H}-indazol-5-yl)-1-oxidanylidene-1-[[(2~{S})-1-oxidanylidene-3-piperidin-4-yl-1-(4-pyridin-4-ylpiperazin-1-yl)propan-2-yl]amino]propan-2-yl]-2-oxidanylidene-spiro[1~{H}-pyrido[2,3-d][1,3]oxazine-4,4'-piperidine]-1'-carboxamide × 1 PG4 TETRAETHYLENE GLYCOL × 2 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;298 K;0.1 M BIS-TRIS pH 5.5, 0.1 M ammonium acetate, 15 % PEG 10,000
|
分辨率 1.60 Å R-free 0.214 |
| 6ZIS Crystal structure of a CGRP receptor ectodomain heterodimer with bound high affinity inhibitor 提交 2020-06-26 | 聚集状态不同 配体/离子不同 实验环境不同 结构质量不同 | Assembly 1 信息不足 单体;蛋白 × 1 PDB 声明:monomeric |
链 A
24–111(88 aa)
|
未记录 | PG4 TETRAETHYLENE GLYCOL × 3 3N6 N-{(1S)-5-amino-1-[(4-pyridin-4-ylpiperazin-1-yl)carbonyl]pentyl}-3,5-dibromo-Nalpha-{[4-(2-oxo-1,4-dihydroquinazolin-3 (2H)-yl)piperidin-1-yl]carbonyl}-D-tyrosinamide × 1 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;298 K;0.1 M BIS-TRIS pH 5.5, 0.1 M ammonium acetate, 15 % PEG 10,000
|
分辨率 1.73 Å R-free 0.244 |
| 7KNT CryoEM structure of the apo-CGRP receptor in a detergent micelle 提交 2020-11-06 | 构建体不同 聚集状态不同 实验方法不同 实验环境不同 结构质量不同 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 E
27–148(122 aa)
|
未记录 | 未记录非水小分子 |
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.15 Å |
| 7KNU CryoEM structure of the CGRP receptor with bound CGRP peptide in a detergent micelle 提交 2020-11-06 | 构建体不同 聚集状态不同 实验方法不同 实验环境不同 结构质量不同 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric |
链 E
27–148(122 aa)
|
未记录 | 未记录非水小分子 |
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.49 Å |
| 7P0F Crystal structure of a CGRP receptor ectodomain heterodimer bound to macrocyclic inhibitor HTL0028125 提交 2021-06-29 | 聚集状态不同 配体/离子不同 实验环境不同 结构质量不同 | Assembly 1 信息不足 单体;蛋白 × 1 PDB 声明:monomeric |
链 A
24–111(88 aa)
|
未记录 | 7IR (1S,10R,23E)-12-methyl-10-[(7-methyl-1H-indazol-5-yl)methyl]-15,18,21-trioxa-5,9,12,27,29-pentazapentacyclo[23.5.2.11,4.13,7.028,31]tetratriaconta-3(33),4,6,23,25(32),26,28(31)-heptaene-8,11,30-trione × 1 PG4 TETRAETHYLENE GLYCOL × 1 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;298 K;0.1 M BIS-TRIS PH 5.5, 0.1 M AMMONIUM ACETATE, 15 % PEG 10,000
|
分辨率 1.85 Å R-free 0.249 |
| 7P0I Crystal structure of a CGRP receptor ectodomain heterodimer bound to macrocyclic inhibitor Compound 13 提交 2021-06-29 | 聚集状态不同 配体/离子不同 实验环境不同 结构质量不同 | Assembly 1 信息不足 单体;蛋白 × 1 PDB 声明:monomeric |
链 A
24–111(88 aa)
|
未记录 | PG4 TETRAETHYLENE GLYCOL × 2 7IU (1S,20E)-10-(benzofuran-3-ylmethyl)-12-methyl-15,18-dioxa-5,9,12,24,26-pentazapentacyclo[20.5.2.11,4.13,7.025,28]hentriaconta-3(30),4,6,20,22(29),23,25(28)-heptaene-8,11,27-trione × 1 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;298 K;0.1 M BIS-TRIS pH 5.5, 0.1 M ammonium acetate, 15 % PEG 10,000
|
分辨率 2.30 Å R-free 0.251 |
| 7TYF Human Amylin1 Receptor in complex with Gs and rat amylin peptide 提交 2022-02-13 | 构建体不同 聚集状态不同 配体/离子不同 实验方法不同 实验环境不同 结构质量不同 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 7 PDB 声明:heptameric |
链 E
27–148(122 aa)
|
未记录 | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 PLM PALMITIC ACID × 9 Y01 CHOLESTEROL HEMISUCCINATE × 2 P42 (2S)-2-{[(1R)-1-hydroxyhexadecyl]oxy}-3-{[(1R)-1-hydroxyoctadecyl]oxy}propyl 2-(trimethylammonio)ethyl phosphate × 1 PTY PHOSPHATIDYLETHANOLAMINE × 1 |
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 2.20 Å |
| 7TYW Human Amylin1 Receptor in complex with Gs and salmon calcitonin peptide 提交 2022-02-14 | 构建体不同 聚集状态不同 配体/离子不同 实验方法不同 实验环境不同 结构质量不同 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 7 PDB 声明:heptameric |
链 E
27–148(122 aa)
|
未记录 | PLM PALMITIC ACID × 2 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 Y01 CHOLESTEROL HEMISUCCINATE × 2 |
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.00 Å |
| 8AX5 Crystal structure of a CGRP receptor ectodomain heterodimer bound to macrocyclic inhibitor HTL0029881 提交 2022-08-30 | 聚集状态不同 配体/离子不同 实验环境不同 结构质量不同 | Assembly 1 信息不足 单体;蛋白 × 1 PDB 声明:monomeric |
链 A
24–111(88 aa)
|
未记录 | OKU (1~{R},10~{R},20~{E})-12-methyl-10-[(7-methyl-2~{H}-indazol-5-yl)methyl]-15,18-dioxa-9,12,24,26-tetrazapentacyclo[20.5.2.1^{1,4}.1^{3,7}.0^{25,28}]hentriaconta-3,5,7(30),20,22,24,28-heptaene-8,11,27-trione × 1 PG4 TETRAETHYLENE GLYCOL × 1 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;298 K;0.1 M BIS-TRIS pH 5.5, 0.1 M ammonium acetate, 15 % PEG 10,000
|
分辨率 2.75 Å R-free 0.277 |
| 8AX6 Crystal structure of a CGRP receptor ectodomain heterodimer bound to macrocyclic inhibitor HTL0029882 提交 2022-08-30 | 聚集状态不同 配体/离子不同 实验环境不同 结构质量不同 | Assembly 1 信息不足 单体;蛋白 × 1 PDB 声明:monomeric |
链 A
24–111(88 aa)
|
未记录 | OP9 (1~{S},10~{R},20~{E})-12-methyl-10-[(7-methyl-2~{H}-indazol-5-yl)methyl]-15,18-dioxa-9,12,24,26-tetrazapentacyclo[20.5.2.1^{1,4}.1^{3,7}.0^{25,28}]hentriaconta-3(30),4,6,20,22,24,28-heptaene-8,11,27-trione × 1 PG4 TETRAETHYLENE GLYCOL × 1 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;298 K;0.1 M BIS-TRIS PH 5.5, 0.1 M AMMONIUM ACETATE, 15 % PEG 10,000
|
分辨率 1.90 Å R-free 0.244 |
| 8AX7 Crystal structure of a CGRP receptor ectodomain heterodimer bound to macrocyclic inhibitor HTL0031448 提交 2022-08-30 | 聚集状态不同 配体/离子不同 实验环境不同 结构质量不同 | Assembly 1 信息不足 单体;蛋白 × 1 PDB 声明:monomeric |
链 A
24–111(88 aa)
|
未记录 | PG4 TETRAETHYLENE GLYCOL × 1 OL0 (1~{S},10~{R},20~{E})-10-[(1,7-dimethylindazol-5-yl)methyl]-12-methyl-15,18-dioxa-9,12,24,26-tetrazapentacyclo[20.5.2.1^{1,4}.1^{3,7}.0^{25,28}]hentriaconta-3(30),4,6,20,22,24,28-heptaene-8,11,27-trione × 1 ACT ACETATE ION × 3 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;298 K;0.1 M BIS-TRIS pH 5.5, 0.1 M ammonium acetate, 15 % PEG 10,000
|
分辨率 1.65 Å R-free 0.251 |
| 9AUC Human Amylin1 Receptor in Complex with Gs and human Calcitonin Gene-Related Peptide 提交 2024-02-28 | 构建体不同 聚集状态不同 配体/离子不同 实验方法不同 实验环境不同 结构质量不同 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 7 PDB 声明:heptameric |
链 E
27–148(122 aa)
|
未记录 | PLM PALMITIC ACID × 5 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 Y01 CHOLESTEROL HEMISUCCINATE × 2 |
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 2.40 Å |
| 9BLW Human amylin1 Receptor in complex with Gs and Cagrilintide backbone (non-acylated) 提交 2024-05-01 | 构建体不同 聚集状态不同 配体/离子不同 实验方法不同 实验环境不同 结构质量不同 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 7 PDB 声明:heptameric |
链 E
27–148(122 aa)
|
未记录 | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 |
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.20 Å |
| 9BP3 Human Amylin1 Receptor in complex with Gs and cagrilintide 提交 2024-05-06 | 构建体不同 聚集状态不同 配体/离子不同 实验方法不同 实验环境不同 结构质量不同 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 7 PDB 声明:heptameric |
链 E
27–148(122 aa)
|
未记录 | A1B90 icosanedioic acid × 1 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 P42 (2S)-2-{[(1R)-1-hydroxyhexadecyl]oxy}-3-{[(1R)-1-hydroxyoctadecyl]oxy}propyl 2-(trimethylammonio)ethyl phosphate × 1 Y01 CHOLESTEROL HEMISUCCINATE × 2 |
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 2.20 Å |
| 9MM5 CGRP Receptor in complex with dC2_049 提交 2024-12-19 | 构建体不同 聚集状态不同 实验方法不同 实验环境不同 结构质量不同 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric |
链 E
27–148(122 aa)
|
未记录 | 未记录非水小分子 |
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.26 Å |
| 9MNI CGRP Receptor in complex with dC2_050 提交 2024-12-21 | 构建体不同 聚集状态不同 实验方法不同 实验环境不同 结构质量不同 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric |
链 E
27–148(122 aa)
|
未记录 | 未记录非水小分子 |
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 4.06 Å |
| 9UWQ A combined Cryo_EM structure of Cagrilintide-AMY1R-Gs complex 提交 2025-05-12 | 构建体不同 聚集状态不同 实验方法不同 实验环境不同 结构质量不同 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 6 PDB 声明:hexameric |
链 E
27–148(122 aa)
|
未记录 | 未记录非水小分子 |
ELECTRON MICROSCOPY
cryo-EM缓冲液
pH 7.04
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.10 Å |
共 25 个其他 PDB 条目、36 个 assembly。 打开独立比较页并筛选聚集状态
查看构建体与数据证据
| UniProt名称 | RAMP1_HUMAN |
| Isoform | — |
| PDB实体 | 1 |
| 链与序列区间 | 作者链 A; PDB构建体 375–462; UniProt 24–111 作者链 B; PDB构建体 375–462; UniProt 24–111 作者链 C; PDB构建体 375–462; UniProt 24–111 作者链 D; PDB构建体 375–462; UniProt 24–111 |