6em1

State C (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Ribosome production factor 1

OrganismNot specified

UniProt P38805

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPF1_YEAST
Isoform —
PDB entities 1
Chains and sequence ranges Author chain x; PDBConstruct 1–295; UniProt 1–295

60S ribosomal protein L7-A

OrganismNot specified

UniProt P05737

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL7A_YEAST
Isoform —
PDB entities 2
Chains and sequence ranges Author chain F; PDBConstruct 1–244; UniProt 1–244

Protein MAK16

OrganismNot specified

UniProt P10962

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MAK16_YEAST
Isoform —
PDB entities 3
Chains and sequence ranges Author chain 3; PDBConstruct 1–306; UniProt 1–306

Ribosomal RNA-processing protein 1

OrganismNot specified

UniProt P35178

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RRP1_YEAST
Isoform —
PDB entities 4
Chains and sequence ranges Author chain 4; PDBConstruct 1–278; UniProt 1–278

Ribosome biogenesis protein NSA1

OrganismNot specified

UniProt P53136

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NSA1_YEAST
Isoform —
PDB entities 5
Chains and sequence ranges Author chain 5; PDBConstruct 1–463; UniProt 1–463

Ribosome biogenesis protein BRX1

OrganismNot specified

UniProt Q08235

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BRX1_YEAST
Isoform —
PDB entities 6
Chains and sequence ranges Author chain A; PDBConstruct 1–291; UniProt 1–291

Nucleolar GTP-binding protein 1

OrganismNot specified

UniProt Q02892

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NOG1_YEAST
Isoform —
PDB entities 7
Chains and sequence ranges Author chain b; PDBConstruct 1–647; UniProt 1–647

rRNA-processing protein EBP2

OrganismNot specified

UniProt P36049

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name EBP2_YEAST
Isoform —
PDB entities 8
Chains and sequence ranges Author chain J; PDBConstruct 1–427; UniProt 1–427

Ribosome biogenesis protein NSA2

OrganismNot specified

UniProt P40078

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NSA2_YEAST
Isoform —
PDB entities 9
Chains and sequence ranges Author chain r; PDBConstruct 1–261; UniProt 1–261

Nuclear GTP-binding protein NUG1

OrganismNot specified

UniProt P40010

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NUG1_YEAST
Isoform —
PDB entities 10
Chains and sequence ranges Author chain s; PDBConstruct 1–520; UniProt 1–520

Ribosome biogenesis protein RLP24

OrganismNot specified

UniProt Q07915

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RLP24_YEAST
Isoform —
PDB entities 11
Chains and sequence ranges Author chain u; PDBConstruct 1–199; UniProt 1–199

Nucleolar protein 16

OrganismNot specified

UniProt P40007

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NOP16_YEAST
Isoform —
PDB entities 12
Chains and sequence ranges Author chain v; PDBConstruct 1–231; UniProt 1–231

Ribosome assembly factor MRT4

OrganismNot specified

UniProt P33201

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MRT4_YEAST
Isoform —
PDB entities 13
Chains and sequence ranges Author chain W; PDBConstruct 1–236; UniProt 1–236

Eukaryotic translation initiation factor 6

OrganismNot specified

UniProt Q12522

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name IF6_YEAST
Isoform —
PDB entities 14
Chains and sequence ranges Author chain y; PDBConstruct 1–245; UniProt 1–245

UPF0642 protein YBL028C

OrganismNot specified

UniProt P38202

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name YBC8_YEAST
Isoform —
PDB entities 15
Chains and sequence ranges Author chain z; PDBConstruct 1–106; UniProt 1–106

60S ribosomal protein L3

OrganismNot specified

UniProt P14126

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL3_YEAST
Isoform —
PDB entities 16
Chains and sequence ranges Author chain B; PDBConstruct 1–387; UniProt 1–387

60S ribosomal protein L4-A

OrganismNot specified

UniProt P10664

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL4A_YEAST
Isoform —
PDB entities 17
Chains and sequence ranges Author chain C; PDBConstruct 1–362; UniProt 1–362

60S ribosomal protein L32

OrganismNot specified

UniProt P38061

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL32_YEAST
Isoform —
PDB entities 18
Chains and sequence ranges Author chain e; PDBConstruct 1–130; UniProt 1–130

60S ribosomal protein L6-A

OrganismNot specified

UniProt Q02326

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL6A_YEAST
Isoform —
PDB entities 19
Chains and sequence ranges Author chain E; PDBConstruct 1–176; UniProt 1–176

60S ribosomal protein L33-A

OrganismNot specified

UniProt P05744

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL33A_YEAST
Isoform —
PDB entities 20
Chains and sequence ranges Author chain f; PDBConstruct 1–107; UniProt 1–107

60S ribosomal protein L8-A

OrganismNot specified

UniProt P17076

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL8A_YEAST
Isoform —
PDB entities 21
Chains and sequence ranges Author chain G; PDBConstruct 1–256; UniProt 1–256

60S ribosomal protein L35-A

OrganismNot specified

UniProt P0CX84

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL35A_YEAST
Isoform —
PDB entities 22
Chains and sequence ranges Author chain h; PDBConstruct 1–120; UniProt 1–120

60S ribosomal protein L9-A

OrganismNot specified

UniProt P05738

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL9A_YEAST
Isoform —
PDB entities 23
Chains and sequence ranges Author chain H; PDBConstruct 1–191; UniProt 1–191

60S ribosomal protein L36-B

OrganismNot specified

UniProt O14455

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL36B_YEAST
Isoform —
PDB entities 24
Chains and sequence ranges Author chain i; PDBConstruct 1–100; UniProt 1–100

60S ribosomal protein L37-A

OrganismNot specified

UniProt P49166

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL37A_YEAST
Isoform —
PDB entities 25
Chains and sequence ranges Author chain j; PDBConstruct 1–88; UniProt 1–88

60S ribosomal protein L13-A

OrganismNot specified

UniProt Q12690

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL13A_YEAST
Isoform —
PDB entities 26
Chains and sequence ranges Author chain L; PDBConstruct 1–199; UniProt 1–199

60S ribosomal protein L14-A

OrganismNot specified

UniProt P36105

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL14A_YEAST
Isoform —
PDB entities 27
Chains and sequence ranges Author chain M; PDBConstruct 1–138; UniProt 1–138

60S ribosomal protein L15-A

OrganismNot specified

UniProt P05748

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL15A_YEAST
Isoform —
PDB entities 28
Chains and sequence ranges Author chain N; PDBConstruct 1–204; UniProt 1–204

60S ribosomal protein L16-A

OrganismNot specified

UniProt P26784

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL16A_YEAST
Isoform —
PDB entities 29
Chains and sequence ranges Author chain O; PDBConstruct 1–199; UniProt 1–199

60S ribosomal protein L17-A

OrganismNot specified

UniProt P05740

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL17A_YEAST
Isoform —
PDB entities 30
Chains and sequence ranges Author chain P; PDBConstruct 1–184; UniProt 1–184

60S ribosomal protein L18-A

OrganismNot specified

UniProt P0CX49

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL18A_YEAST
Isoform —
PDB entities 31
Chains and sequence ranges Author chain Q; PDBConstruct 1–186; UniProt 1–186

60S ribosomal protein L20-A

OrganismNot specified

UniProt P0CX23

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL20A_YEAST
Isoform —
PDB entities 32
Chains and sequence ranges Author chain S; PDBConstruct 1–172; UniProt 1–172

60S ribosomal protein L23-A

OrganismNot specified

UniProt P0CX41

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL23A_YEAST
Isoform —
PDB entities 33
Chains and sequence ranges Author chain V; PDBConstruct 1–137; UniProt 1–137

60S ribosomal protein L26-A

OrganismNot specified

UniProt P05743

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL26A_YEAST
Isoform —
PDB entities 34
Chains and sequence ranges Author chain Y; PDBConstruct 1–127; UniProt 1–127

Proteasome-interacting protein CIC1

OrganismNot specified

UniProt P38779

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CIC1_YEAST
Isoform —
PDB entities 38
Chains and sequence ranges Author chain K; PDBConstruct 1–376; UniProt 1–376

Ribosome biogenesis protein ERB1

OrganismNot specified

UniProt Q04660

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ERB1_YEAST
Isoform —
PDB entities 39
Chains and sequence ranges Author chain m; PDBConstruct 1–807; UniProt 1–807

ATP-dependent RNA helicase HAS1

OrganismNot specified

UniProt Q03532

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name HAS1_YEAST
Isoform —
PDB entities 40
Chains and sequence ranges Author chain D; PDBConstruct 1–505; UniProt 1–505

Ribosome biogenesis protein 15

OrganismNot specified

UniProt P53927

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Pescadillo homolog × 1 (A6ZV85) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NOP15_YEAST
Isoform —
PDB entities 41
Chains and sequence ranges Author chain o; PDBConstruct 1–220; UniProt 1–220

Pescadillo homolog

OrganismNot specified

UniProt A6ZV85

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PESC_YEAS7
Isoform —
PDB entities 42
Chains and sequence ranges Author chain n; PDBConstruct 1–605; UniProt 1–605

Ribosome biogenesis protein RLP7

OrganismNot specified

UniProt P40693

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 40 RNA 3 Ribosome production factor 1 × 1 (P38805) 60S ribosomal protein L7-A × 1 (P05737) Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) Ribosome biogenesis protein BRX1 × 1 (Q08235) Nucleolar GTP-binding protein 1 × 1 (Q02892) rRNA-processing protein EBP2 × 1 (P36049) Ribosome biogenesis protein NSA2 × 1 (P40078) Nuclear GTP-binding protein NUG1 × 1 (P40010) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome assembly factor MRT4 × 1 (P33201) Eukaryotic translation initiation factor 6 × 1 (Q12522) UPF0642 protein YBL028C × 1 (P38202) 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L36-B × 1 (O14455) 60S ribosomal protein L37-A × 1 (P49166) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L23-A × 1 (P0CX41) 60S ribosomal protein L26-A × 1 (P05743) 25S ribosomal RNA × 1 5.8S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Proteasome-interacting protein CIC1 × 1 (P38779) Ribosome biogenesis protein ERB1 × 1 (Q04660) ATP-dependent RNA helicase HAS1 × 1 (Q03532) Ribosome biogenesis protein 15 × 1 (P53927) Pescadillo homolog × 1 (A6ZV85) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RLP7_YEAST
Isoform —
PDB entities 43
Chains and sequence ranges Author chain t; PDBConstruct 1–322; UniProt 1–322

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id6em1
Deposition date deposition_date2017-10-01
Structure title titleState C (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes
Keywords keywordsLarge Subunit Biogenesis Nucleolus, RIBOSOME; RIBOSOME
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

6em1__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

6em1__assembly_1__model_1 | I(q)

10-2 10-1 107 108 109 1010 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

6em1__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)84.24 Å
Rg (electron density)88.23 Å
Total Rg87.83 Å
Atom count99980
Residues9080
Excluded volume1630300 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 6em1__assembly_1__model_1 43-meric (43) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (44)

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7. Citations (1)