7ohx

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population A

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Protein MAK16

OrganismNot specified

UniProt P10962

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MAK16_YEAST
Isoform —
PDB entities 3
Chains and sequence ranges Author chain 3; PDBConstruct 1–306; UniProt 1–306

Ribosomal RNA-processing protein 1

OrganismNot specified

UniProt P35178

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RRP1_YEAST
Isoform —
PDB entities 4
Chains and sequence ranges Author chain 4; PDBConstruct 1–278; UniProt 1–278

Ribosome biogenesis protein NSA1

OrganismNot specified

UniProt P53136

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NSA1_YEAST
Isoform —
PDB entities 5
Chains and sequence ranges Author chain 5; PDBConstruct 1–463; UniProt 1–463

60S ribosomal protein L3

OrganismNot specified

UniProt P14126

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL3_YEAST
Isoform —
PDB entities 7
Chains and sequence ranges Author chain B; PDBConstruct 1–387; UniProt 1–387

60S ribosomal protein L4-A

OrganismNot specified

UniProt P10664

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL4A_YEAST
Isoform —
PDB entities 8
Chains and sequence ranges Author chain C; PDBConstruct 1–362; UniProt 1–362

ATP-dependent RNA helicase HAS1

OrganismNot specified

UniProt Q03532

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name HAS1_YEAST
Isoform —
PDB entities 9
Chains and sequence ranges Author chain D; PDBConstruct 1–505; UniProt 1–505

60S ribosomal protein L6-A

OrganismNot specified

UniProt Q02326

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL6A_YEAST
Isoform —
PDB entities 10
Chains and sequence ranges Author chain E; PDBConstruct 1–176; UniProt 1–176

60S ribosomal protein L7-A

OrganismNot specified

UniProt P05737

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL7A_YEAST
Isoform —
PDB entities 11
Chains and sequence ranges Author chain F; PDBConstruct 1–244; UniProt 1–244

60S ribosomal protein L8-A

OrganismNot specified

UniProt P17076

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL8A_YEAST
Isoform —
PDB entities 12
Chains and sequence ranges Author chain G; PDBConstruct 1–256; UniProt 1–256

60S ribosomal protein L9-A

OrganismNot specified

UniProt P05738

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL9A_YEAST
Isoform —
PDB entities 13
Chains and sequence ranges Author chain H; PDBConstruct 1–191; UniProt 1–191

Proteasome-interacting protein CIC1

OrganismNot specified

UniProt P38779

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CIC1_YEAST
Isoform —
PDB entities 14
Chains and sequence ranges Author chain K; PDBConstruct 1–376; UniProt 1–376

60S ribosomal protein L13-A

OrganismNot specified

UniProt Q12690

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL13A_YEAST
Isoform —
PDB entities 15
Chains and sequence ranges Author chain L; PDBConstruct 1–199; UniProt 1–199

60S ribosomal protein L14-A

OrganismNot specified

UniProt P36105

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL14A_YEAST
Isoform —
PDB entities 16
Chains and sequence ranges Author chain M; PDBConstruct 1–138; UniProt 1–138

60S ribosomal protein L15-A

OrganismNot specified

UniProt P05748

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL15A_YEAST
Isoform —
PDB entities 17
Chains and sequence ranges Author chain N; PDBConstruct 1–204; UniProt 1–204

60S ribosomal protein L16-A

OrganismNot specified

UniProt P26784

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL16A_YEAST
Isoform —
PDB entities 18
Chains and sequence ranges Author chain O; PDBConstruct 1–199; UniProt 1–199

60S ribosomal protein L17-A

OrganismNot specified

UniProt P05740

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL17A_YEAST
Isoform —
PDB entities 19
Chains and sequence ranges Author chain P; PDBConstruct 1–184; UniProt 1–184

60S ribosomal protein L18-A

OrganismNot specified

UniProt P0CX49

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL18A_YEAST
Isoform —
PDB entities 20
Chains and sequence ranges Author chain Q; PDBConstruct 1–186; UniProt 1–186

60S ribosomal protein L20-A

OrganismNot specified

UniProt P0CX23

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL20A_YEAST
Isoform —
PDB entities 21
Chains and sequence ranges Author chain S; PDBConstruct 1–172; UniProt 1–172

Ribosome assembly factor MRT4

OrganismNot specified

UniProt P33201

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MRT4_YEAST
Isoform —
PDB entities 22
Chains and sequence ranges Author chain W; PDBConstruct 1–236; UniProt 1–236

60S ribosomal protein L26-A

OrganismNot specified

UniProt P05743

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL26A_YEAST
Isoform —
PDB entities 23
Chains and sequence ranges Author chain Y; PDBConstruct 1–127; UniProt 1–127

Nucleolar GTP-binding protein 1

OrganismNot specified

UniProt Q02892

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NOG1_YEAST
Isoform —
PDB entities 24
Chains and sequence ranges Author chain b; PDBConstruct 1–647; UniProt 1–647

60S ribosomal protein L32

OrganismNot specified

UniProt P38061

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL32_YEAST
Isoform —
PDB entities 25
Chains and sequence ranges Author chain e; PDBConstruct 1–130; UniProt 1–130

60S ribosomal protein L33-A

OrganismNot specified

UniProt P05744

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL33A_YEAST
Isoform —
PDB entities 26
Chains and sequence ranges Author chain f; PDBConstruct 1–107; UniProt 1–107

60S ribosomal protein L35-A

OrganismNot specified

UniProt P0CX84

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL35A_YEAST
Isoform —
PDB entities 27
Chains and sequence ranges Author chain h; PDBConstruct 1–120; UniProt 1–120

60S ribosomal protein L36-A

OrganismNot specified

UniProt P05745

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL36A_YEAST
Isoform —
PDB entities 28
Chains and sequence ranges Author chain i; PDBConstruct 1–100; UniProt 1–100

60S ribosomal protein L37-A

OrganismNot specified

UniProt P49166

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL37A_YEAST
Isoform —
PDB entities 29
Chains and sequence ranges Author chain j; PDBConstruct 1–88; UniProt 1–88

Ribosome biogenesis protein ERB1

OrganismNot specified

UniProt Q04660

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ERB1_YEAST
Isoform —
PDB entities 30
Chains and sequence ranges Author chain m; PDBConstruct 1–807; UniProt 1–807

Pescadillo homolog

OrganismNot specified

UniProt P53261

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PESC_YEAST
Isoform —
PDB entities 31
Chains and sequence ranges Author chain n; PDBConstruct 1–605; UniProt 1–605

Ribosome biogenesis protein 15

OrganismNot specified

UniProt P53927

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NOP15_YEAST
Isoform —
PDB entities 32
Chains and sequence ranges Author chain o; PDBConstruct 1–220; UniProt 1–220

Ribosome biogenesis protein RLP7

OrganismNot specified

UniProt P40693

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RLP7_YEAST
Isoform —
PDB entities 33
Chains and sequence ranges Author chain t; PDBConstruct 1–322; UniProt 1–322

Ribosome biogenesis protein RLP24

OrganismNot specified

UniProt Q07915

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RLP24_YEAST
Isoform —
PDB entities 34
Chains and sequence ranges Author chain u; PDBConstruct 1–199; UniProt 1–199

Nucleolar protein 16

OrganismNot specified

UniProt P40007

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Ribosome production factor 1 × 1 (P38805) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NOP16_YEAST
Isoform —
PDB entities 35
Chains and sequence ranges Author chain v; PDBConstruct 1–231; UniProt 1–231

Ribosome production factor 1

OrganismNot specified

UniProt P38805

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Eukaryotic translation initiation factor 6 × 1 (Q12522) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPF1_YEAST
Isoform —
PDB entities 36
Chains and sequence ranges Author chain x; PDBConstruct 1–295; UniProt 1–295

Eukaryotic translation initiation factor 6

OrganismNot specified

UniProt Q12522

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 34 RNA 3 25S rRNA × 1 5.8S rRNA × 1 Protein MAK16 × 1 (P10962) Ribosomal RNA-processing protein 1 × 1 (P35178) Ribosome biogenesis protein NSA1 × 1 (P53136) ITS2 × 1 60S ribosomal protein L3 × 1 (P14126) 60S ribosomal protein L4-A × 1 (P10664) ATP-dependent RNA helicase HAS1 × 1 (Q03532) 60S ribosomal protein L6-A × 1 (Q02326) 60S ribosomal protein L7-A × 1 (P05737) 60S ribosomal protein L8-A × 1 (P17076) 60S ribosomal protein L9-A × 1 (P05738) Proteasome-interacting protein CIC1 × 1 (P38779) 60S ribosomal protein L13-A × 1 (Q12690) 60S ribosomal protein L14-A × 1 (P36105) 60S ribosomal protein L15-A × 1 (P05748) 60S ribosomal protein L16-A × 1 (P26784) 60S ribosomal protein L17-A × 1 (P05740) 60S ribosomal protein L18-A × 1 (P0CX49) 60S ribosomal protein L20-A × 1 (P0CX23) Ribosome assembly factor MRT4 × 1 (P33201) 60S ribosomal protein L26-A × 1 (P05743) Nucleolar GTP-binding protein 1 × 1 (Q02892) 60S ribosomal protein L32 × 1 (P38061) 60S ribosomal protein L33-A × 1 (P05744) 60S ribosomal protein L35-A × 1 (P0CX84) 60S ribosomal protein L36-A × 1 (P05745) 60S ribosomal protein L37-A × 1 (P49166) Ribosome biogenesis protein ERB1 × 1 (Q04660) Pescadillo homolog × 1 (P53261) Ribosome biogenesis protein 15 × 1 (P53927) Ribosome biogenesis protein RLP7 × 1 (P40693) Ribosome biogenesis protein RLP24 × 1 (Q07915) Nucleolar protein 16 × 1 (P40007) Ribosome production factor 1 × 1 (P38805) ZINC ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name IF6_YEAST
Isoform —
PDB entities 37
Chains and sequence ranges Author chain y; PDBConstruct 1–245; UniProt 1–245

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id7ohx
Deposition date deposition_date2021-05-11
Structure title titleNog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population A
Keywords keywordsribosomal assembly state, RIBOSOME; RIBOSOME
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

7ohx__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

7ohx__assembly_1__model_1 | I(q)

10-2 10-1 107 108 109 1010 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

7ohx__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)83.22 Å
Rg (electron density)87.13 Å
Total Rg86.75 Å
Atom count157028
Residues7850
Excluded volume1417900 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 7ohx__assembly_1__model_1 37-meric (37) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (38)

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7. Citations (1)