6lth

Structure of human BAF Base module

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Transcription activator BRG1

Homo sapiens

UniProt P51532

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 8 AT-rich interactive domain-containing protein 1A × 1 (O14497) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 × 1 (Q12824) SWI/SNF complex subunit SMARCC2 × 2 (Q8TAQ2) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 × 1 (Q96GM5) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 × 1 (Q969G3) Zinc finger protein ubi-d4 × 1 (Q92785) ZINC ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SMCA4_HUMAN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain I; PDBConstruct 1–1647; UniProt 1–1647

AT-rich interactive domain-containing protein 1A

Homo sapiens

UniProt O14497

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 8 Transcription activator BRG1 × 1 (P51532) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 × 1 (Q12824) SWI/SNF complex subunit SMARCC2 × 2 (Q8TAQ2) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 × 1 (Q96GM5) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 × 1 (Q969G3) Zinc finger protein ubi-d4 × 1 (Q92785) ZINC ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ARI1A_HUMAN
Isoform —
PDB entities 2
Chains and sequence ranges Author chain L; PDBConstruct 1–2285; UniProt 1–2285

SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1

Homo sapiens

UniProt Q12824

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 8 Transcription activator BRG1 × 1 (P51532) AT-rich interactive domain-containing protein 1A × 1 (O14497) SWI/SNF complex subunit SMARCC2 × 2 (Q8TAQ2) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 × 1 (Q96GM5) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 × 1 (Q969G3) Zinc finger protein ubi-d4 × 1 (Q92785) ZINC ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SNF5_HUMAN
Isoform —
PDB entities 3
Chains and sequence ranges Author chain M; PDBConstruct 1–385; UniProt 1–385

SWI/SNF complex subunit SMARCC2

Homo sapiens

UniProt Q8TAQ2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 8 Transcription activator BRG1 × 1 (P51532) AT-rich interactive domain-containing protein 1A × 1 (O14497) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 × 1 (Q12824) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 × 1 (Q96GM5) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 × 1 (Q969G3) Zinc finger protein ubi-d4 × 1 (Q92785) ZINC ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SMRC2_HUMAN
Isoform —
PDB entities 4
Chains and sequence ranges Author chain N; PDBConstruct 1–1214; UniProt 1–1214 Author chain O; PDBConstruct 1–1214; UniProt 1–1214

SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1

Homo sapiens

UniProt Q96GM5

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 8 Transcription activator BRG1 × 1 (P51532) AT-rich interactive domain-containing protein 1A × 1 (O14497) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 × 1 (Q12824) SWI/SNF complex subunit SMARCC2 × 2 (Q8TAQ2) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 × 1 (Q969G3) Zinc finger protein ubi-d4 × 1 (Q92785) ZINC ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SMRD1_HUMAN
Isoform —
PDB entities 5
Chains and sequence ranges Author chain P; PDBConstruct 1–515; UniProt 1–515

SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1

Homo sapiens

UniProt Q969G3

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 8 Transcription activator BRG1 × 1 (P51532) AT-rich interactive domain-containing protein 1A × 1 (O14497) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 × 1 (Q12824) SWI/SNF complex subunit SMARCC2 × 2 (Q8TAQ2) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 × 1 (Q96GM5) Zinc finger protein ubi-d4 × 1 (Q92785) ZINC ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SMCE1_HUMAN
Isoform —
PDB entities 6
Chains and sequence ranges Author chain Q; PDBConstruct 1–411; UniProt 1–411

Zinc finger protein ubi-d4

Homo sapiens

UniProt Q92785

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 8 Transcription activator BRG1 × 1 (P51532) AT-rich interactive domain-containing protein 1A × 1 (O14497) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 × 1 (Q12824) SWI/SNF complex subunit SMARCC2 × 2 (Q8TAQ2) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 × 1 (Q96GM5) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 × 1 (Q969G3) ZINC ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name REQU_HUMAN
Isoform —
PDB entities 7
Chains and sequence ranges Author chain R; PDBConstruct 1–391; UniProt 1–391

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id6lth
Deposition date deposition_date2020-01-22
Structure title titleStructure of human BAF Base module
Keywords keywordsChromatin remodeler, Complex, GENE REGULATION; GENE REGULATION
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

6lth__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

6lth__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

6lth__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)47.07 Å
Rg (electron density)46.87 Å
Total Rg46.97 Å
Atom count14970
Residues1845
Excluded volume267180 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 6lth__assembly_1__model_1 octameric (8) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (8)

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7. Citations (1)