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9rl4

Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL-6

Method: ELECTRON MICROSCOPY Dmax: 244.9 Å Quality: GOOD

SAXS Profile

SAXS profile for 9rl4

P(r) Distribution

P(r) distribution for 9rl4
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1. Structure Basics

entry_id9rl4
deposition_date2025-06-16
titleStructure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL-6
keywordsremodelling, chromatin, transcription, GENE REGULATION; GENE REGULATION
methodELECTRON MICROSCOPY
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Download Data

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2. SAXS Parameters (CRYSOL)

rg_guinier69.24 Å
rg_electron68.96 Å
i05312680000.00
molecular_weight546530.0 kDa
excluded_volume655050 ų
envelope_volume1170100 ų
shell_volume139590 ų
envelope_diameter260.9 Å
shell_rg70.32 Å
envelope_rg68.41 Å
shape_rg69.01 Å
total_rg68.82 Å
total_atoms38125
n_residues4626
n_harmonics20
q_range— – 0.5000 Å−1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3
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3. P(r) Analysis (GNOM)

dmax244.9 Å
rg_real69.31 Å
rg_real_error2.64 Å
i0_real5.3130e+09
i0_real_error1.1940e+08
rg_reciprocal68.89 Å
i0_reciprocal5308000000.0000
total_estimate0.8023
solution_quality GOOD a GOOD solution
n_peaks2
r_peak_primary74.5 Å
skewness0.390
kurtosis-0.272
angular_range— – 0.1150 Å−1
current_alpha0.0000
highest_alpha317900000.0000
n_real_points24
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.810; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.996; Smooth: 0.000
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4. Crystallography & Experiment

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5. Entities & Polymer Info (19)

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6. Citations (1)

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7. Files & Curves (10)