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9rn1

Structure of BAF-nucleosome complex with OCT4-SOX2 at SHL+6 in ADP-bound state, BAF47 bound to ATPase lobe 2

Method: ELECTRON MICROSCOPY Dmax: 271.3 Å Quality: REASONABLE

SAXS Profile

SAXS profile for 9rn1

P(r) Distribution

P(r) distribution for 9rn1
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1. Structure Basics

entry_id9rn1
deposition_date2025-06-19
titleStructure of BAF-nucleosome complex with OCT4-SOX2 at SHL+6 in ADP-bound state, BAF47 bound to ATPase lobe 2
keywordsremodeller, chromatin, transcription, GENE REGULATION; GENE REGULATION
methodELECTRON MICROSCOPY
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Download Data

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2. SAXS Parameters (CRYSOL)

rg_guinier79.68 Å
rg_electron80.32 Å
i03818370000.00
molecular_weight424570.0 kDa
excluded_volume489060 ų
envelope_volume1131100 ų
shell_volume121600 ų
envelope_diameter271.7 Å
shell_rg76.92 Å
envelope_rg75.71 Å
shape_rg80.24 Å
total_rg80.48 Å
total_atoms29765
n_residues4470
n_harmonics20
q_range— – 0.5000 Å−1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3
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3. P(r) Analysis (GNOM)

dmax271.3 Å
rg_real83.55 Å
rg_real_error1.49 Å
i0_real3.8290e+09
i0_real_error8.0410e+07
rg_reciprocal78.11 Å
i0_reciprocal3802000000.0000
total_estimate0.6301
solution_quality REASONABLE a REASONABLE solution
n_peaks1
r_peak_primary67.8 Å
skewness0.428
kurtosis-0.511
angular_range— – 0.1000 Å−1
current_alpha1.4030
highest_alpha189100000.0000
n_real_points21
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.907; Stabil: 0.889; Sysdev: 0.000; Positv: 1.000; Valcen: 0.962; Smooth: 0.036
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4. Crystallography & Experiment

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5. Entities & Polymer Info (17)

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6. Citations (1)

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7. Files & Curves (10)