6mzd

Human TFIID Lobe A canonical

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Transcription initiation factor TFIID subunit 1

OrganismNot specified

UniProt P21675

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 12 Transcription initiation factor TFIID subunit 3 × 1 (Q5VWG9) Transcription initiation factor TFIID subunit 4 × 1 (O00268) Transcription initiation factor TFIID subunit 5 × 1 (Q15542) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 9 × 1 (Q16594) Transcription initiation factor TFIID subunit 10 × 1 (Q12962) Transcription initiation factor TFIID subunit 11 × 1 (Q15544) Transcription initiation factor TFIID subunit 12 × 1 (Q16514) Transcription initiation factor TFIID subunit 13 × 1 (Q15543) TATA-box-binding protein × 1 (P20226) poly(UNK) × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TAF1_HUMAN
Isoform P21675-2
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–1873; UniProt 21–1893

Transcription initiation factor TFIID subunit 3

OrganismNot specified

UniProt Q5VWG9

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 12 Transcription initiation factor TFIID subunit 1 × 1 (P21675) Transcription initiation factor TFIID subunit 4 × 1 (O00268) Transcription initiation factor TFIID subunit 5 × 1 (Q15542) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 9 × 1 (Q16594) Transcription initiation factor TFIID subunit 10 × 1 (Q12962) Transcription initiation factor TFIID subunit 11 × 1 (Q15544) Transcription initiation factor TFIID subunit 12 × 1 (Q16514) Transcription initiation factor TFIID subunit 13 × 1 (Q15543) TATA-box-binding protein × 1 (P20226) poly(UNK) × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TAF3_HUMAN
Isoform —
PDB entities 2
Chains and sequence ranges Author chain C; PDBConstruct 1–929; UniProt 1–929

Transcription initiation factor TFIID subunit 4

OrganismNot specified

UniProt O00268

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 12 Transcription initiation factor TFIID subunit 1 × 1 (P21675) Transcription initiation factor TFIID subunit 3 × 1 (Q5VWG9) Transcription initiation factor TFIID subunit 5 × 1 (Q15542) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 9 × 1 (Q16594) Transcription initiation factor TFIID subunit 10 × 1 (Q12962) Transcription initiation factor TFIID subunit 11 × 1 (Q15544) Transcription initiation factor TFIID subunit 12 × 1 (Q16514) Transcription initiation factor TFIID subunit 13 × 1 (Q15543) TATA-box-binding protein × 1 (P20226) poly(UNK) × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TAF4_HUMAN
Isoform —
PDB entities 3
Chains and sequence ranges Author chain D; PDBConstruct 1–1085; UniProt 1–1085

Transcription initiation factor TFIID subunit 5

OrganismNot specified

UniProt Q15542

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 12 Transcription initiation factor TFIID subunit 1 × 1 (P21675) Transcription initiation factor TFIID subunit 3 × 1 (Q5VWG9) Transcription initiation factor TFIID subunit 4 × 1 (O00268) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 9 × 1 (Q16594) Transcription initiation factor TFIID subunit 10 × 1 (Q12962) Transcription initiation factor TFIID subunit 11 × 1 (Q15544) Transcription initiation factor TFIID subunit 12 × 1 (Q16514) Transcription initiation factor TFIID subunit 13 × 1 (Q15543) TATA-box-binding protein × 1 (P20226) poly(UNK) × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TAF5_HUMAN
Isoform —
PDB entities 4
Chains and sequence ranges Author chain F; PDBConstruct 1–496; UniProt 1–496 Author chain F; PDBConstruct 537–800; UniProt 537–800

Transcription initiation factor TFIID subunit 6

OrganismNot specified

UniProt P49848

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 12 Transcription initiation factor TFIID subunit 1 × 1 (P21675) Transcription initiation factor TFIID subunit 3 × 1 (Q5VWG9) Transcription initiation factor TFIID subunit 4 × 1 (O00268) Transcription initiation factor TFIID subunit 5 × 1 (Q15542) Transcription initiation factor TFIID subunit 9 × 1 (Q16594) Transcription initiation factor TFIID subunit 10 × 1 (Q12962) Transcription initiation factor TFIID subunit 11 × 1 (Q15544) Transcription initiation factor TFIID subunit 12 × 1 (Q16514) Transcription initiation factor TFIID subunit 13 × 1 (Q15543) TATA-box-binding protein × 1 (P20226) poly(UNK) × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TAF6_HUMAN
Isoform —
PDB entities 5
Chains and sequence ranges Author chain H; PDBConstruct 1–677; UniProt 1–677

Transcription initiation factor TFIID subunit 9

OrganismNot specified

UniProt Q16594

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 12 Transcription initiation factor TFIID subunit 1 × 1 (P21675) Transcription initiation factor TFIID subunit 3 × 1 (Q5VWG9) Transcription initiation factor TFIID subunit 4 × 1 (O00268) Transcription initiation factor TFIID subunit 5 × 1 (Q15542) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 10 × 1 (Q12962) Transcription initiation factor TFIID subunit 11 × 1 (Q15544) Transcription initiation factor TFIID subunit 12 × 1 (Q16514) Transcription initiation factor TFIID subunit 13 × 1 (Q15543) TATA-box-binding protein × 1 (P20226) poly(UNK) × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TAF9_HUMAN
Isoform —
PDB entities 6
Chains and sequence ranges Author chain L; PDBConstruct 1–109; UniProt 1–109 Author chain L; PDBConstruct 117–264; UniProt 117–264

Transcription initiation factor TFIID subunit 10

OrganismNot specified

UniProt Q12962

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 12 Transcription initiation factor TFIID subunit 1 × 1 (P21675) Transcription initiation factor TFIID subunit 3 × 1 (Q5VWG9) Transcription initiation factor TFIID subunit 4 × 1 (O00268) Transcription initiation factor TFIID subunit 5 × 1 (Q15542) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 9 × 1 (Q16594) Transcription initiation factor TFIID subunit 11 × 1 (Q15544) Transcription initiation factor TFIID subunit 12 × 1 (Q16514) Transcription initiation factor TFIID subunit 13 × 1 (Q15543) TATA-box-binding protein × 1 (P20226) poly(UNK) × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TAF10_HUMAN
Isoform —
PDB entities 7
Chains and sequence ranges Author chain N; PDBConstruct 1–218; UniProt 1–218

Transcription initiation factor TFIID subunit 11

OrganismNot specified

UniProt Q15544

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 12 Transcription initiation factor TFIID subunit 1 × 1 (P21675) Transcription initiation factor TFIID subunit 3 × 1 (Q5VWG9) Transcription initiation factor TFIID subunit 4 × 1 (O00268) Transcription initiation factor TFIID subunit 5 × 1 (Q15542) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 9 × 1 (Q16594) Transcription initiation factor TFIID subunit 10 × 1 (Q12962) Transcription initiation factor TFIID subunit 12 × 1 (Q16514) Transcription initiation factor TFIID subunit 13 × 1 (Q15543) TATA-box-binding protein × 1 (P20226) poly(UNK) × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TAF11_HUMAN
Isoform —
PDB entities 8
Chains and sequence ranges Author chain P; PDBConstruct 1–211; UniProt 1–211

Transcription initiation factor TFIID subunit 12

OrganismNot specified

UniProt Q16514

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 12 Transcription initiation factor TFIID subunit 1 × 1 (P21675) Transcription initiation factor TFIID subunit 3 × 1 (Q5VWG9) Transcription initiation factor TFIID subunit 4 × 1 (O00268) Transcription initiation factor TFIID subunit 5 × 1 (Q15542) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 9 × 1 (Q16594) Transcription initiation factor TFIID subunit 10 × 1 (Q12962) Transcription initiation factor TFIID subunit 11 × 1 (Q15544) Transcription initiation factor TFIID subunit 13 × 1 (Q15543) TATA-box-binding protein × 1 (P20226) poly(UNK) × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TAF12_HUMAN
Isoform —
PDB entities 9
Chains and sequence ranges Author chain Q; PDBConstruct 1–161; UniProt 1–161

Transcription initiation factor TFIID subunit 13

OrganismNot specified

UniProt Q15543

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 12 Transcription initiation factor TFIID subunit 1 × 1 (P21675) Transcription initiation factor TFIID subunit 3 × 1 (Q5VWG9) Transcription initiation factor TFIID subunit 4 × 1 (O00268) Transcription initiation factor TFIID subunit 5 × 1 (Q15542) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 9 × 1 (Q16594) Transcription initiation factor TFIID subunit 10 × 1 (Q12962) Transcription initiation factor TFIID subunit 11 × 1 (Q15544) Transcription initiation factor TFIID subunit 12 × 1 (Q16514) TATA-box-binding protein × 1 (P20226) poly(UNK) × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TAF13_HUMAN
Isoform —
PDB entities 10
Chains and sequence ranges Author chain S; PDBConstruct 1–124; UniProt 1–124

TATA-box-binding protein

OrganismNot specified

UniProt P20226

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 12 Transcription initiation factor TFIID subunit 1 × 1 (P21675) Transcription initiation factor TFIID subunit 3 × 1 (Q5VWG9) Transcription initiation factor TFIID subunit 4 × 1 (O00268) Transcription initiation factor TFIID subunit 5 × 1 (Q15542) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 9 × 1 (Q16594) Transcription initiation factor TFIID subunit 10 × 1 (Q12962) Transcription initiation factor TFIID subunit 11 × 1 (Q15544) Transcription initiation factor TFIID subunit 12 × 1 (Q16514) Transcription initiation factor TFIID subunit 13 × 1 (Q15543) poly(UNK) × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TBP_HUMAN
Isoform —
PDB entities 11
Chains and sequence ranges Author chain T; PDBConstruct 1–339; UniProt 1–339

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id6mzd
Deposition date deposition_date2018-11-05
Structure title titleHuman TFIID Lobe A canonical
Keywords keywordsTranscription, DNA, Nuclear; TRANSCRIPTION
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

6mzd__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

6mzd__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

6mzd__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)42.03 Å
Rg (electron density)42.35 Å
Total Rg42.48 Å
Atom count11120
Residues1481
Excluded volume196430 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 6mzd__assembly_1__model_1 dodecameric (12) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (12)

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7. Citations (1)