6mzm

Human TFIID bound to promoter DNA and TFIIA

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Transcription initiation factor TFIID subunit 2, TAF2

OrganismNot specified

UniProt Q6P1X5

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 15 DNA 2 Transcription initiation factor TFIID subunit 1, TAF1 × 1 Transcription initiation factor TFIID subunit 4, TAF4 × 1 (O00268) Transcription initiation factor TFIID subunit 5,TAF5 × 1 (Q15542) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 7 × 1 (Q15545) Transcription initiation factor TFIID subunit 8, TAF8 × 1 (Q7Z7C8) Transcription initiation factor TFIID subunit 9, TAF9 × 1 (Q16594) Transcription initiation factor TFIID subunit 10 × 1 (Q12962) Transcription initiation factor TFIID subunit 12 × 1 (Q16514) TATA-box-binding protein × 1 (P20226) SCP DNA (80-MER) × 1 SCP DNA (80-MER) × 1 Transcription initiation factor IIA subunit 1 × 1 Transcription initiation factor IIA subunit 2 × 1 (P52657) Unk × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TAF2_HUMAN
Isoform —
PDB entities 2
Chains and sequence ranges Author chain B; PDBConstruct 1–1199; UniProt 1–1199

Transcription initiation factor TFIID subunit 4, TAF4

OrganismNot specified

UniProt O00268

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 15 DNA 2 Transcription initiation factor TFIID subunit 1, TAF1 × 1 Transcription initiation factor TFIID subunit 2, TAF2 × 1 (Q6P1X5) Transcription initiation factor TFIID subunit 5,TAF5 × 1 (Q15542) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 7 × 1 (Q15545) Transcription initiation factor TFIID subunit 8, TAF8 × 1 (Q7Z7C8) Transcription initiation factor TFIID subunit 9, TAF9 × 1 (Q16594) Transcription initiation factor TFIID subunit 10 × 1 (Q12962) Transcription initiation factor TFIID subunit 12 × 1 (Q16514) TATA-box-binding protein × 1 (P20226) SCP DNA (80-MER) × 1 SCP DNA (80-MER) × 1 Transcription initiation factor IIA subunit 1 × 1 Transcription initiation factor IIA subunit 2 × 1 (P52657) Unk × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TAF4_HUMAN
Isoform —
PDB entities 3
Chains and sequence ranges Author chain D; PDBConstruct 1–1025; UniProt 61–1085

Transcription initiation factor TFIID subunit 5,TAF5

OrganismNot specified

UniProt Q15542

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 15 DNA 2 Transcription initiation factor TFIID subunit 1, TAF1 × 1 Transcription initiation factor TFIID subunit 2, TAF2 × 1 (Q6P1X5) Transcription initiation factor TFIID subunit 4, TAF4 × 1 (O00268) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 7 × 1 (Q15545) Transcription initiation factor TFIID subunit 8, TAF8 × 1 (Q7Z7C8) Transcription initiation factor TFIID subunit 9, TAF9 × 1 (Q16594) Transcription initiation factor TFIID subunit 10 × 1 (Q12962) Transcription initiation factor TFIID subunit 12 × 1 (Q16514) TATA-box-binding protein × 1 (P20226) SCP DNA (80-MER) × 1 SCP DNA (80-MER) × 1 Transcription initiation factor IIA subunit 1 × 1 Transcription initiation factor IIA subunit 2 × 1 (P52657) Unk × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TAF5_HUMAN
Isoform —
PDB entities 4
Chains and sequence ranges Author chain G; PDBConstruct 1–496; UniProt 1–496 Author chain G; PDBConstruct 537–800; UniProt 537–800

Transcription initiation factor TFIID subunit 6

OrganismNot specified

UniProt P49848

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 15 DNA 2 Transcription initiation factor TFIID subunit 1, TAF1 × 1 Transcription initiation factor TFIID subunit 2, TAF2 × 1 (Q6P1X5) Transcription initiation factor TFIID subunit 4, TAF4 × 1 (O00268) Transcription initiation factor TFIID subunit 5,TAF5 × 1 (Q15542) Transcription initiation factor TFIID subunit 7 × 1 (Q15545) Transcription initiation factor TFIID subunit 8, TAF8 × 1 (Q7Z7C8) Transcription initiation factor TFIID subunit 9, TAF9 × 1 (Q16594) Transcription initiation factor TFIID subunit 10 × 1 (Q12962) Transcription initiation factor TFIID subunit 12 × 1 (Q16514) TATA-box-binding protein × 1 (P20226) SCP DNA (80-MER) × 1 SCP DNA (80-MER) × 1 Transcription initiation factor IIA subunit 1 × 1 Transcription initiation factor IIA subunit 2 × 1 (P52657) Unk × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TAF6_HUMAN
Isoform —
PDB entities 5, 6
Chains and sequence ranges Author chain H; PDBConstruct 1–677; UniProt 1–677 Author chain I; PDBConstruct 1–206; UniProt 38–243 Author chain I; PDBConstruct 217–677; UniProt 207–667

Transcription initiation factor TFIID subunit 7

OrganismNot specified

UniProt Q15545

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 15 DNA 2 Transcription initiation factor TFIID subunit 1, TAF1 × 1 Transcription initiation factor TFIID subunit 2, TAF2 × 1 (Q6P1X5) Transcription initiation factor TFIID subunit 4, TAF4 × 1 (O00268) Transcription initiation factor TFIID subunit 5,TAF5 × 1 (Q15542) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 8, TAF8 × 1 (Q7Z7C8) Transcription initiation factor TFIID subunit 9, TAF9 × 1 (Q16594) Transcription initiation factor TFIID subunit 10 × 1 (Q12962) Transcription initiation factor TFIID subunit 12 × 1 (Q16514) TATA-box-binding protein × 1 (P20226) SCP DNA (80-MER) × 1 SCP DNA (80-MER) × 1 Transcription initiation factor IIA subunit 1 × 1 Transcription initiation factor IIA subunit 2 × 1 (P52657) Unk × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TAF7_HUMAN
Isoform —
PDB entities 7
Chains and sequence ranges Author chain J; PDBConstruct 1–349; UniProt 1–349

Transcription initiation factor TFIID subunit 8, TAF8

OrganismNot specified

UniProt Q7Z7C8

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 15 DNA 2 Transcription initiation factor TFIID subunit 1, TAF1 × 1 Transcription initiation factor TFIID subunit 2, TAF2 × 1 (Q6P1X5) Transcription initiation factor TFIID subunit 4, TAF4 × 1 (O00268) Transcription initiation factor TFIID subunit 5,TAF5 × 1 (Q15542) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 7 × 1 (Q15545) Transcription initiation factor TFIID subunit 9, TAF9 × 1 (Q16594) Transcription initiation factor TFIID subunit 10 × 1 (Q12962) Transcription initiation factor TFIID subunit 12 × 1 (Q16514) TATA-box-binding protein × 1 (P20226) SCP DNA (80-MER) × 1 SCP DNA (80-MER) × 1 Transcription initiation factor IIA subunit 1 × 1 Transcription initiation factor IIA subunit 2 × 1 (P52657) Unk × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TAF8_HUMAN
Isoform —
PDB entities 8
Chains and sequence ranges Author chain K; PDBConstruct 1–310; UniProt 1–310

Transcription initiation factor TFIID subunit 9, TAF9

OrganismNot specified

UniProt Q16594

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 15 DNA 2 Transcription initiation factor TFIID subunit 1, TAF1 × 1 Transcription initiation factor TFIID subunit 2, TAF2 × 1 (Q6P1X5) Transcription initiation factor TFIID subunit 4, TAF4 × 1 (O00268) Transcription initiation factor TFIID subunit 5,TAF5 × 1 (Q15542) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 7 × 1 (Q15545) Transcription initiation factor TFIID subunit 8, TAF8 × 1 (Q7Z7C8) Transcription initiation factor TFIID subunit 10 × 1 (Q12962) Transcription initiation factor TFIID subunit 12 × 1 (Q16514) TATA-box-binding protein × 1 (P20226) SCP DNA (80-MER) × 1 SCP DNA (80-MER) × 1 Transcription initiation factor IIA subunit 1 × 1 Transcription initiation factor IIA subunit 2 × 1 (P52657) Unk × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TAF9_HUMAN
Isoform —
PDB entities 9
Chains and sequence ranges Author chain L; PDBConstruct 1–264; UniProt 1–264

Transcription initiation factor TFIID subunit 10

OrganismNot specified

UniProt Q12962

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 15 DNA 2 Transcription initiation factor TFIID subunit 1, TAF1 × 1 Transcription initiation factor TFIID subunit 2, TAF2 × 1 (Q6P1X5) Transcription initiation factor TFIID subunit 4, TAF4 × 1 (O00268) Transcription initiation factor TFIID subunit 5,TAF5 × 1 (Q15542) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 7 × 1 (Q15545) Transcription initiation factor TFIID subunit 8, TAF8 × 1 (Q7Z7C8) Transcription initiation factor TFIID subunit 9, TAF9 × 1 (Q16594) Transcription initiation factor TFIID subunit 12 × 1 (Q16514) TATA-box-binding protein × 1 (P20226) SCP DNA (80-MER) × 1 SCP DNA (80-MER) × 1 Transcription initiation factor IIA subunit 1 × 1 Transcription initiation factor IIA subunit 2 × 1 (P52657) Unk × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TAF10_HUMAN
Isoform —
PDB entities 10
Chains and sequence ranges Author chain O; PDBConstruct 1–218; UniProt 1–218

Transcription initiation factor TFIID subunit 12

OrganismNot specified

UniProt Q16514

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 15 DNA 2 Transcription initiation factor TFIID subunit 1, TAF1 × 1 Transcription initiation factor TFIID subunit 2, TAF2 × 1 (Q6P1X5) Transcription initiation factor TFIID subunit 4, TAF4 × 1 (O00268) Transcription initiation factor TFIID subunit 5,TAF5 × 1 (Q15542) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 7 × 1 (Q15545) Transcription initiation factor TFIID subunit 8, TAF8 × 1 (Q7Z7C8) Transcription initiation factor TFIID subunit 9, TAF9 × 1 (Q16594) Transcription initiation factor TFIID subunit 10 × 1 (Q12962) TATA-box-binding protein × 1 (P20226) SCP DNA (80-MER) × 1 SCP DNA (80-MER) × 1 Transcription initiation factor IIA subunit 1 × 1 Transcription initiation factor IIA subunit 2 × 1 (P52657) Unk × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TAF12_HUMAN
Isoform —
PDB entities 11
Chains and sequence ranges Author chain R; PDBConstruct 1–161; UniProt 1–161

TATA-box-binding protein

OrganismNot specified

UniProt P20226

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 15 DNA 2 Transcription initiation factor TFIID subunit 1, TAF1 × 1 Transcription initiation factor TFIID subunit 2, TAF2 × 1 (Q6P1X5) Transcription initiation factor TFIID subunit 4, TAF4 × 1 (O00268) Transcription initiation factor TFIID subunit 5,TAF5 × 1 (Q15542) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 7 × 1 (Q15545) Transcription initiation factor TFIID subunit 8, TAF8 × 1 (Q7Z7C8) Transcription initiation factor TFIID subunit 9, TAF9 × 1 (Q16594) Transcription initiation factor TFIID subunit 10 × 1 (Q12962) Transcription initiation factor TFIID subunit 12 × 1 (Q16514) SCP DNA (80-MER) × 1 SCP DNA (80-MER) × 1 Transcription initiation factor IIA subunit 1 × 1 Transcription initiation factor IIA subunit 2 × 1 (P52657) Unk × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TBP_HUMAN
Isoform —
PDB entities 12
Chains and sequence ranges Author chain T; PDBConstruct 1–339; UniProt 1–339

Transcription initiation factor IIA subunit 2

Homo sapiens

UniProt P52657

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 15 DNA 2 Transcription initiation factor TFIID subunit 1, TAF1 × 1 Transcription initiation factor TFIID subunit 2, TAF2 × 1 (Q6P1X5) Transcription initiation factor TFIID subunit 4, TAF4 × 1 (O00268) Transcription initiation factor TFIID subunit 5,TAF5 × 1 (Q15542) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 6 × 1 (P49848) Transcription initiation factor TFIID subunit 7 × 1 (Q15545) Transcription initiation factor TFIID subunit 8, TAF8 × 1 (Q7Z7C8) Transcription initiation factor TFIID subunit 9, TAF9 × 1 (Q16594) Transcription initiation factor TFIID subunit 10 × 1 (Q12962) Transcription initiation factor TFIID subunit 12 × 1 (Q16514) TATA-box-binding protein × 1 (P20226) SCP DNA (80-MER) × 1 SCP DNA (80-MER) × 1 Transcription initiation factor IIA subunit 1 × 1 Unk × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name T2AG_HUMAN
Isoform —
PDB entities 16
Chains and sequence ranges Author chain X; PDBConstruct 1–97; UniProt 3–99

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id6mzm
Deposition date deposition_date2018-11-05
Structure title titleHuman TFIID bound to promoter DNA and TFIIA
Keywords keywordsTranscription, DNA, Nuclear, transcription-dna complex; transcription/dna
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

6mzm__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

6mzm__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

6mzm__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)80.05 Å
Rg (electron density)79.62 Å
Total Rg79.89 Å
Atom count32243
Residues3960
Excluded volume561770 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 6mzm__assembly_1__model_1 heptadecameric (17) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (17)

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7. Citations (1)