7oqb

The U2 part of Saccharomyces cerevisiae spliceosomal pre-A complex (delta BS-A ACT1)

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

U2 snRNP component HSH155

OrganismNot specified

UniProt P49955

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 2 ACT1 pre-mRNA (delta-BS-A) × 1 Pre-mRNA-splicing factor PRP11 × 1 (Q07350) Pre-mRNA-splicing factor PRP21 × 1 (P32524) Pre-mRNA-splicing factor PRP9 × 1 (P19736) Pre-mRNA-splicing factor RDS3 × 1 (Q06835) Cold sensitive U2 snRNA suppressor 1 × 1 (Q02554) Pre-mRNA-splicing factor RSE1 × 1 (Q04693) Protein HSH49 × 1 (Q99181) RDS3 complex subunit 10 × 1 (P0C074) ;U2 small nuclear ribonucleoprotein A' ; × 1 (Q08963) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P40567) Small nuclear ribonucleoprotein-associated protein B × 1 (P40018) Small nuclear ribonucleoprotein Sm D1 × 1 (Q02260) Small nuclear ribonucleoprotein Sm D2 × 1 (Q06217) Small nuclear ribonucleoprotein Sm D3 × 1 (P43321) Small nuclear ribonucleoprotein E × 1 (Q12330) Small nuclear ribonucleoprotein F × 1 (P54999) Small nuclear ribonucleoprotein G × 1 (P40204) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 × 1 (P21372) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SF3B1_YEAST
Isoform —
PDB entities 1
Chains and sequence ranges Author chain O; PDBConstruct 1–971; UniProt 1–971

Pre-mRNA-splicing factor PRP11

OrganismNot specified

UniProt Q07350

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 2 U2 snRNP component HSH155 × 1 (P49955) ACT1 pre-mRNA (delta-BS-A) × 1 Pre-mRNA-splicing factor PRP21 × 1 (P32524) Pre-mRNA-splicing factor PRP9 × 1 (P19736) Pre-mRNA-splicing factor RDS3 × 1 (Q06835) Cold sensitive U2 snRNA suppressor 1 × 1 (Q02554) Pre-mRNA-splicing factor RSE1 × 1 (Q04693) Protein HSH49 × 1 (Q99181) RDS3 complex subunit 10 × 1 (P0C074) ;U2 small nuclear ribonucleoprotein A' ; × 1 (Q08963) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P40567) Small nuclear ribonucleoprotein-associated protein B × 1 (P40018) Small nuclear ribonucleoprotein Sm D1 × 1 (Q02260) Small nuclear ribonucleoprotein Sm D2 × 1 (Q06217) Small nuclear ribonucleoprotein Sm D3 × 1 (P43321) Small nuclear ribonucleoprotein E × 1 (Q12330) Small nuclear ribonucleoprotein F × 1 (P54999) Small nuclear ribonucleoprotein G × 1 (P40204) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 × 1 (P21372) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PRP11_YEAST
Isoform —
PDB entities 3
Chains and sequence ranges Author chain U; PDBConstruct 1–282; UniProt 1–266

Pre-mRNA-splicing factor PRP21

OrganismNot specified

UniProt P32524

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 2 U2 snRNP component HSH155 × 1 (P49955) ACT1 pre-mRNA (delta-BS-A) × 1 Pre-mRNA-splicing factor PRP11 × 1 (Q07350) Pre-mRNA-splicing factor PRP9 × 1 (P19736) Pre-mRNA-splicing factor RDS3 × 1 (Q06835) Cold sensitive U2 snRNA suppressor 1 × 1 (Q02554) Pre-mRNA-splicing factor RSE1 × 1 (Q04693) Protein HSH49 × 1 (Q99181) RDS3 complex subunit 10 × 1 (P0C074) ;U2 small nuclear ribonucleoprotein A' ; × 1 (Q08963) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P40567) Small nuclear ribonucleoprotein-associated protein B × 1 (P40018) Small nuclear ribonucleoprotein Sm D1 × 1 (Q02260) Small nuclear ribonucleoprotein Sm D2 × 1 (Q06217) Small nuclear ribonucleoprotein Sm D3 × 1 (P43321) Small nuclear ribonucleoprotein E × 1 (Q12330) Small nuclear ribonucleoprotein F × 1 (P54999) Small nuclear ribonucleoprotein G × 1 (P40204) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 × 1 (P21372) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PRP21_YEAST
Isoform —
PDB entities 4
Chains and sequence ranges Author chain V; PDBConstruct 1–280; UniProt 1–280

Pre-mRNA-splicing factor PRP9

OrganismNot specified

UniProt P19736

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 2 U2 snRNP component HSH155 × 1 (P49955) ACT1 pre-mRNA (delta-BS-A) × 1 Pre-mRNA-splicing factor PRP11 × 1 (Q07350) Pre-mRNA-splicing factor PRP21 × 1 (P32524) Pre-mRNA-splicing factor RDS3 × 1 (Q06835) Cold sensitive U2 snRNA suppressor 1 × 1 (Q02554) Pre-mRNA-splicing factor RSE1 × 1 (Q04693) Protein HSH49 × 1 (Q99181) RDS3 complex subunit 10 × 1 (P0C074) ;U2 small nuclear ribonucleoprotein A' ; × 1 (Q08963) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P40567) Small nuclear ribonucleoprotein-associated protein B × 1 (P40018) Small nuclear ribonucleoprotein Sm D1 × 1 (Q02260) Small nuclear ribonucleoprotein Sm D2 × 1 (Q06217) Small nuclear ribonucleoprotein Sm D3 × 1 (P43321) Small nuclear ribonucleoprotein E × 1 (Q12330) Small nuclear ribonucleoprotein F × 1 (P54999) Small nuclear ribonucleoprotein G × 1 (P40204) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 × 1 (P21372) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PRP9_YEAST
Isoform —
PDB entities 5
Chains and sequence ranges Author chain T; PDBConstruct 1–530; UniProt 1–530

Pre-mRNA-splicing factor RDS3

OrganismNot specified

UniProt Q06835

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 2 U2 snRNP component HSH155 × 1 (P49955) ACT1 pre-mRNA (delta-BS-A) × 1 Pre-mRNA-splicing factor PRP11 × 1 (Q07350) Pre-mRNA-splicing factor PRP21 × 1 (P32524) Pre-mRNA-splicing factor PRP9 × 1 (P19736) Cold sensitive U2 snRNA suppressor 1 × 1 (Q02554) Pre-mRNA-splicing factor RSE1 × 1 (Q04693) Protein HSH49 × 1 (Q99181) RDS3 complex subunit 10 × 1 (P0C074) ;U2 small nuclear ribonucleoprotein A' ; × 1 (Q08963) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P40567) Small nuclear ribonucleoprotein-associated protein B × 1 (P40018) Small nuclear ribonucleoprotein Sm D1 × 1 (Q02260) Small nuclear ribonucleoprotein Sm D2 × 1 (Q06217) Small nuclear ribonucleoprotein Sm D3 × 1 (P43321) Small nuclear ribonucleoprotein E × 1 (Q12330) Small nuclear ribonucleoprotein F × 1 (P54999) Small nuclear ribonucleoprotein G × 1 (P40204) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 × 1 (P21372) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RDS3_YEAST
Isoform —
PDB entities 6
Chains and sequence ranges Author chain S; PDBConstruct 1–107; UniProt 1–107

Cold sensitive U2 snRNA suppressor 1

OrganismNot specified

UniProt Q02554

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 2 U2 snRNP component HSH155 × 1 (P49955) ACT1 pre-mRNA (delta-BS-A) × 1 Pre-mRNA-splicing factor PRP11 × 1 (Q07350) Pre-mRNA-splicing factor PRP21 × 1 (P32524) Pre-mRNA-splicing factor PRP9 × 1 (P19736) Pre-mRNA-splicing factor RDS3 × 1 (Q06835) Pre-mRNA-splicing factor RSE1 × 1 (Q04693) Protein HSH49 × 1 (Q99181) RDS3 complex subunit 10 × 1 (P0C074) ;U2 small nuclear ribonucleoprotein A' ; × 1 (Q08963) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P40567) Small nuclear ribonucleoprotein-associated protein B × 1 (P40018) Small nuclear ribonucleoprotein Sm D1 × 1 (Q02260) Small nuclear ribonucleoprotein Sm D2 × 1 (Q06217) Small nuclear ribonucleoprotein Sm D3 × 1 (P43321) Small nuclear ribonucleoprotein E × 1 (Q12330) Small nuclear ribonucleoprotein F × 1 (P54999) Small nuclear ribonucleoprotein G × 1 (P40204) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 × 1 (P21372) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CUS1_YEAST
Isoform —
PDB entities 7
Chains and sequence ranges Author chain Q; PDBConstruct 1–436; UniProt 1–436

Pre-mRNA-splicing factor RSE1

OrganismNot specified

UniProt Q04693

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 2 U2 snRNP component HSH155 × 1 (P49955) ACT1 pre-mRNA (delta-BS-A) × 1 Pre-mRNA-splicing factor PRP11 × 1 (Q07350) Pre-mRNA-splicing factor PRP21 × 1 (P32524) Pre-mRNA-splicing factor PRP9 × 1 (P19736) Pre-mRNA-splicing factor RDS3 × 1 (Q06835) Cold sensitive U2 snRNA suppressor 1 × 1 (Q02554) Protein HSH49 × 1 (Q99181) RDS3 complex subunit 10 × 1 (P0C074) ;U2 small nuclear ribonucleoprotein A' ; × 1 (Q08963) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P40567) Small nuclear ribonucleoprotein-associated protein B × 1 (P40018) Small nuclear ribonucleoprotein Sm D1 × 1 (Q02260) Small nuclear ribonucleoprotein Sm D2 × 1 (Q06217) Small nuclear ribonucleoprotein Sm D3 × 1 (P43321) Small nuclear ribonucleoprotein E × 1 (Q12330) Small nuclear ribonucleoprotein F × 1 (P54999) Small nuclear ribonucleoprotein G × 1 (P40204) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 × 1 (P21372) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RSE1_YEAST
Isoform —
PDB entities 8
Chains and sequence ranges Author chain P; PDBConstruct 1–1361; UniProt 1–1361

Protein HSH49

OrganismNot specified

UniProt Q99181

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 2 U2 snRNP component HSH155 × 1 (P49955) ACT1 pre-mRNA (delta-BS-A) × 1 Pre-mRNA-splicing factor PRP11 × 1 (Q07350) Pre-mRNA-splicing factor PRP21 × 1 (P32524) Pre-mRNA-splicing factor PRP9 × 1 (P19736) Pre-mRNA-splicing factor RDS3 × 1 (Q06835) Cold sensitive U2 snRNA suppressor 1 × 1 (Q02554) Pre-mRNA-splicing factor RSE1 × 1 (Q04693) RDS3 complex subunit 10 × 1 (P0C074) ;U2 small nuclear ribonucleoprotein A' ; × 1 (Q08963) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P40567) Small nuclear ribonucleoprotein-associated protein B × 1 (P40018) Small nuclear ribonucleoprotein Sm D1 × 1 (Q02260) Small nuclear ribonucleoprotein Sm D2 × 1 (Q06217) Small nuclear ribonucleoprotein Sm D3 × 1 (P43321) Small nuclear ribonucleoprotein E × 1 (Q12330) Small nuclear ribonucleoprotein F × 1 (P54999) Small nuclear ribonucleoprotein G × 1 (P40204) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 × 1 (P21372) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name HSH49_YEAST
Isoform —
PDB entities 9
Chains and sequence ranges Author chain R; PDBConstruct 1–213; UniProt 1–213

RDS3 complex subunit 10

OrganismNot specified

UniProt P0C074

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 2 U2 snRNP component HSH155 × 1 (P49955) ACT1 pre-mRNA (delta-BS-A) × 1 Pre-mRNA-splicing factor PRP11 × 1 (Q07350) Pre-mRNA-splicing factor PRP21 × 1 (P32524) Pre-mRNA-splicing factor PRP9 × 1 (P19736) Pre-mRNA-splicing factor RDS3 × 1 (Q06835) Cold sensitive U2 snRNA suppressor 1 × 1 (Q02554) Pre-mRNA-splicing factor RSE1 × 1 (Q04693) Protein HSH49 × 1 (Q99181) ;U2 small nuclear ribonucleoprotein A' ; × 1 (Q08963) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P40567) Small nuclear ribonucleoprotein-associated protein B × 1 (P40018) Small nuclear ribonucleoprotein Sm D1 × 1 (Q02260) Small nuclear ribonucleoprotein Sm D2 × 1 (Q06217) Small nuclear ribonucleoprotein Sm D3 × 1 (P43321) Small nuclear ribonucleoprotein E × 1 (Q12330) Small nuclear ribonucleoprotein F × 1 (P54999) Small nuclear ribonucleoprotein G × 1 (P40204) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 × 1 (P21372) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name YSF3_YEAST
Isoform —
PDB entities 10
Chains and sequence ranges Author chain Z; PDBConstruct 1–84; UniProt 1–84

;U2 small nuclear ribonucleoprotein A' ;

OrganismNot specified

UniProt Q08963

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 2 U2 snRNP component HSH155 × 1 (P49955) ACT1 pre-mRNA (delta-BS-A) × 1 Pre-mRNA-splicing factor PRP11 × 1 (Q07350) Pre-mRNA-splicing factor PRP21 × 1 (P32524) Pre-mRNA-splicing factor PRP9 × 1 (P19736) Pre-mRNA-splicing factor RDS3 × 1 (Q06835) Cold sensitive U2 snRNA suppressor 1 × 1 (Q02554) Pre-mRNA-splicing factor RSE1 × 1 (Q04693) Protein HSH49 × 1 (Q99181) RDS3 complex subunit 10 × 1 (P0C074) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P40567) Small nuclear ribonucleoprotein-associated protein B × 1 (P40018) Small nuclear ribonucleoprotein Sm D1 × 1 (Q02260) Small nuclear ribonucleoprotein Sm D2 × 1 (Q06217) Small nuclear ribonucleoprotein Sm D3 × 1 (P43321) Small nuclear ribonucleoprotein E × 1 (Q12330) Small nuclear ribonucleoprotein F × 1 (P54999) Small nuclear ribonucleoprotein G × 1 (P40204) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 × 1 (P21372) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RU2A_YEAST
Isoform —
PDB entities 11
Chains and sequence ranges Author chain W; PDBConstruct 1–238; UniProt 1–238

;U2 small nuclear ribonucleoprotein B'' ;

OrganismNot specified

UniProt P40567

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 2 U2 snRNP component HSH155 × 1 (P49955) ACT1 pre-mRNA (delta-BS-A) × 1 Pre-mRNA-splicing factor PRP11 × 1 (Q07350) Pre-mRNA-splicing factor PRP21 × 1 (P32524) Pre-mRNA-splicing factor PRP9 × 1 (P19736) Pre-mRNA-splicing factor RDS3 × 1 (Q06835) Cold sensitive U2 snRNA suppressor 1 × 1 (Q02554) Pre-mRNA-splicing factor RSE1 × 1 (Q04693) Protein HSH49 × 1 (Q99181) RDS3 complex subunit 10 × 1 (P0C074) ;U2 small nuclear ribonucleoprotein A' ; × 1 (Q08963) Small nuclear ribonucleoprotein-associated protein B × 1 (P40018) Small nuclear ribonucleoprotein Sm D1 × 1 (Q02260) Small nuclear ribonucleoprotein Sm D2 × 1 (Q06217) Small nuclear ribonucleoprotein Sm D3 × 1 (P43321) Small nuclear ribonucleoprotein E × 1 (Q12330) Small nuclear ribonucleoprotein F × 1 (P54999) Small nuclear ribonucleoprotein G × 1 (P40204) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 × 1 (P21372) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MSL1_YEAST
Isoform —
PDB entities 12
Chains and sequence ranges Author chain Y; PDBConstruct 1–111; UniProt 1–111

Small nuclear ribonucleoprotein-associated protein B

OrganismNot specified

UniProt P40018

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 2 U2 snRNP component HSH155 × 1 (P49955) ACT1 pre-mRNA (delta-BS-A) × 1 Pre-mRNA-splicing factor PRP11 × 1 (Q07350) Pre-mRNA-splicing factor PRP21 × 1 (P32524) Pre-mRNA-splicing factor PRP9 × 1 (P19736) Pre-mRNA-splicing factor RDS3 × 1 (Q06835) Cold sensitive U2 snRNA suppressor 1 × 1 (Q02554) Pre-mRNA-splicing factor RSE1 × 1 (Q04693) Protein HSH49 × 1 (Q99181) RDS3 complex subunit 10 × 1 (P0C074) ;U2 small nuclear ribonucleoprotein A' ; × 1 (Q08963) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P40567) Small nuclear ribonucleoprotein Sm D1 × 1 (Q02260) Small nuclear ribonucleoprotein Sm D2 × 1 (Q06217) Small nuclear ribonucleoprotein Sm D3 × 1 (P43321) Small nuclear ribonucleoprotein E × 1 (Q12330) Small nuclear ribonucleoprotein F × 1 (P54999) Small nuclear ribonucleoprotein G × 1 (P40204) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 × 1 (P21372) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RSMB_YEAST
Isoform —
PDB entities 13
Chains and sequence ranges Author chain s; PDBConstruct 1–196; UniProt 1–196

Small nuclear ribonucleoprotein Sm D1

OrganismNot specified

UniProt Q02260

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 2 U2 snRNP component HSH155 × 1 (P49955) ACT1 pre-mRNA (delta-BS-A) × 1 Pre-mRNA-splicing factor PRP11 × 1 (Q07350) Pre-mRNA-splicing factor PRP21 × 1 (P32524) Pre-mRNA-splicing factor PRP9 × 1 (P19736) Pre-mRNA-splicing factor RDS3 × 1 (Q06835) Cold sensitive U2 snRNA suppressor 1 × 1 (Q02554) Pre-mRNA-splicing factor RSE1 × 1 (Q04693) Protein HSH49 × 1 (Q99181) RDS3 complex subunit 10 × 1 (P0C074) ;U2 small nuclear ribonucleoprotein A' ; × 1 (Q08963) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P40567) Small nuclear ribonucleoprotein-associated protein B × 1 (P40018) Small nuclear ribonucleoprotein Sm D2 × 1 (Q06217) Small nuclear ribonucleoprotein Sm D3 × 1 (P43321) Small nuclear ribonucleoprotein E × 1 (Q12330) Small nuclear ribonucleoprotein F × 1 (P54999) Small nuclear ribonucleoprotein G × 1 (P40204) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 × 1 (P21372) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SMD1_YEAST
Isoform —
PDB entities 14
Chains and sequence ranges Author chain t; PDBConstruct 1–146; UniProt 1–146

Small nuclear ribonucleoprotein Sm D2

OrganismNot specified

UniProt Q06217

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 2 U2 snRNP component HSH155 × 1 (P49955) ACT1 pre-mRNA (delta-BS-A) × 1 Pre-mRNA-splicing factor PRP11 × 1 (Q07350) Pre-mRNA-splicing factor PRP21 × 1 (P32524) Pre-mRNA-splicing factor PRP9 × 1 (P19736) Pre-mRNA-splicing factor RDS3 × 1 (Q06835) Cold sensitive U2 snRNA suppressor 1 × 1 (Q02554) Pre-mRNA-splicing factor RSE1 × 1 (Q04693) Protein HSH49 × 1 (Q99181) RDS3 complex subunit 10 × 1 (P0C074) ;U2 small nuclear ribonucleoprotein A' ; × 1 (Q08963) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P40567) Small nuclear ribonucleoprotein-associated protein B × 1 (P40018) Small nuclear ribonucleoprotein Sm D1 × 1 (Q02260) Small nuclear ribonucleoprotein Sm D3 × 1 (P43321) Small nuclear ribonucleoprotein E × 1 (Q12330) Small nuclear ribonucleoprotein F × 1 (P54999) Small nuclear ribonucleoprotein G × 1 (P40204) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 × 1 (P21372) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SMD2_YEAST
Isoform —
PDB entities 15
Chains and sequence ranges Author chain u; PDBConstruct 1–110; UniProt 1–110

Small nuclear ribonucleoprotein Sm D3

OrganismNot specified

UniProt P43321

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 2 U2 snRNP component HSH155 × 1 (P49955) ACT1 pre-mRNA (delta-BS-A) × 1 Pre-mRNA-splicing factor PRP11 × 1 (Q07350) Pre-mRNA-splicing factor PRP21 × 1 (P32524) Pre-mRNA-splicing factor PRP9 × 1 (P19736) Pre-mRNA-splicing factor RDS3 × 1 (Q06835) Cold sensitive U2 snRNA suppressor 1 × 1 (Q02554) Pre-mRNA-splicing factor RSE1 × 1 (Q04693) Protein HSH49 × 1 (Q99181) RDS3 complex subunit 10 × 1 (P0C074) ;U2 small nuclear ribonucleoprotein A' ; × 1 (Q08963) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P40567) Small nuclear ribonucleoprotein-associated protein B × 1 (P40018) Small nuclear ribonucleoprotein Sm D1 × 1 (Q02260) Small nuclear ribonucleoprotein Sm D2 × 1 (Q06217) Small nuclear ribonucleoprotein E × 1 (Q12330) Small nuclear ribonucleoprotein F × 1 (P54999) Small nuclear ribonucleoprotein G × 1 (P40204) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 × 1 (P21372) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SMD3_YEAST
Isoform —
PDB entities 16
Chains and sequence ranges Author chain v; PDBConstruct 1–101; UniProt 1–101

Small nuclear ribonucleoprotein E

OrganismNot specified

UniProt Q12330

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 2 U2 snRNP component HSH155 × 1 (P49955) ACT1 pre-mRNA (delta-BS-A) × 1 Pre-mRNA-splicing factor PRP11 × 1 (Q07350) Pre-mRNA-splicing factor PRP21 × 1 (P32524) Pre-mRNA-splicing factor PRP9 × 1 (P19736) Pre-mRNA-splicing factor RDS3 × 1 (Q06835) Cold sensitive U2 snRNA suppressor 1 × 1 (Q02554) Pre-mRNA-splicing factor RSE1 × 1 (Q04693) Protein HSH49 × 1 (Q99181) RDS3 complex subunit 10 × 1 (P0C074) ;U2 small nuclear ribonucleoprotein A' ; × 1 (Q08963) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P40567) Small nuclear ribonucleoprotein-associated protein B × 1 (P40018) Small nuclear ribonucleoprotein Sm D1 × 1 (Q02260) Small nuclear ribonucleoprotein Sm D2 × 1 (Q06217) Small nuclear ribonucleoprotein Sm D3 × 1 (P43321) Small nuclear ribonucleoprotein F × 1 (P54999) Small nuclear ribonucleoprotein G × 1 (P40204) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 × 1 (P21372) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RUXE_YEAST
Isoform —
PDB entities 17
Chains and sequence ranges Author chain w; PDBConstruct 1–93; UniProt 1–93

Small nuclear ribonucleoprotein F

OrganismNot specified

UniProt P54999

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 2 U2 snRNP component HSH155 × 1 (P49955) ACT1 pre-mRNA (delta-BS-A) × 1 Pre-mRNA-splicing factor PRP11 × 1 (Q07350) Pre-mRNA-splicing factor PRP21 × 1 (P32524) Pre-mRNA-splicing factor PRP9 × 1 (P19736) Pre-mRNA-splicing factor RDS3 × 1 (Q06835) Cold sensitive U2 snRNA suppressor 1 × 1 (Q02554) Pre-mRNA-splicing factor RSE1 × 1 (Q04693) Protein HSH49 × 1 (Q99181) RDS3 complex subunit 10 × 1 (P0C074) ;U2 small nuclear ribonucleoprotein A' ; × 1 (Q08963) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P40567) Small nuclear ribonucleoprotein-associated protein B × 1 (P40018) Small nuclear ribonucleoprotein Sm D1 × 1 (Q02260) Small nuclear ribonucleoprotein Sm D2 × 1 (Q06217) Small nuclear ribonucleoprotein Sm D3 × 1 (P43321) Small nuclear ribonucleoprotein E × 1 (Q12330) Small nuclear ribonucleoprotein G × 1 (P40204) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 × 1 (P21372) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RUXF_YEAST
Isoform —
PDB entities 18
Chains and sequence ranges Author chain x; PDBConstruct 1–86; UniProt 1–86

Small nuclear ribonucleoprotein G

OrganismNot specified

UniProt P40204

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 2 U2 snRNP component HSH155 × 1 (P49955) ACT1 pre-mRNA (delta-BS-A) × 1 Pre-mRNA-splicing factor PRP11 × 1 (Q07350) Pre-mRNA-splicing factor PRP21 × 1 (P32524) Pre-mRNA-splicing factor PRP9 × 1 (P19736) Pre-mRNA-splicing factor RDS3 × 1 (Q06835) Cold sensitive U2 snRNA suppressor 1 × 1 (Q02554) Pre-mRNA-splicing factor RSE1 × 1 (Q04693) Protein HSH49 × 1 (Q99181) RDS3 complex subunit 10 × 1 (P0C074) ;U2 small nuclear ribonucleoprotein A' ; × 1 (Q08963) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P40567) Small nuclear ribonucleoprotein-associated protein B × 1 (P40018) Small nuclear ribonucleoprotein Sm D1 × 1 (Q02260) Small nuclear ribonucleoprotein Sm D2 × 1 (Q06217) Small nuclear ribonucleoprotein Sm D3 × 1 (P43321) Small nuclear ribonucleoprotein E × 1 (Q12330) Small nuclear ribonucleoprotein F × 1 (P54999) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 × 1 (P21372) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RUXG_YEAST
Isoform —
PDB entities 19
Chains and sequence ranges Author chain y; PDBConstruct 1–77; UniProt 1–77

Pre-mRNA-processing ATP-dependent RNA helicase PRP5

OrganismNot specified

UniProt P21372

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 2 U2 snRNP component HSH155 × 1 (P49955) ACT1 pre-mRNA (delta-BS-A) × 1 Pre-mRNA-splicing factor PRP11 × 1 (Q07350) Pre-mRNA-splicing factor PRP21 × 1 (P32524) Pre-mRNA-splicing factor PRP9 × 1 (P19736) Pre-mRNA-splicing factor RDS3 × 1 (Q06835) Cold sensitive U2 snRNA suppressor 1 × 1 (Q02554) Pre-mRNA-splicing factor RSE1 × 1 (Q04693) Protein HSH49 × 1 (Q99181) RDS3 complex subunit 10 × 1 (P0C074) ;U2 small nuclear ribonucleoprotein A' ; × 1 (Q08963) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P40567) Small nuclear ribonucleoprotein-associated protein B × 1 (P40018) Small nuclear ribonucleoprotein Sm D1 × 1 (Q02260) Small nuclear ribonucleoprotein Sm D2 × 1 (Q06217) Small nuclear ribonucleoprotein Sm D3 × 1 (P43321) Small nuclear ribonucleoprotein E × 1 (Q12330) Small nuclear ribonucleoprotein F × 1 (P54999) Small nuclear ribonucleoprotein G × 1 (P40204) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PRP5_YEAST
Isoform —
PDB entities 20
Chains and sequence ranges Author chain p; PDBConstruct 1–849; UniProt 1–849

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id7oqb
Deposition date deposition_date2021-06-03
Structure title titleThe U2 part of Saccharomyces cerevisiae spliceosomal pre-A complex (delta BS-A ACT1)
Keywords keywordsS. cerevisiae, pre-A complex, Prp5, U1 snRNP, U2 snRNP, prespliceosome, SPLICING; SPLICING
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

7oqb__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

7oqb__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

7oqb__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)74.70 Å
Rg (electron density)75.15 Å
Total Rg75.05 Å
Atom count26416
Residues4719
Excluded volume422040 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 7oqb__assembly_1__model_1 21-meric (21) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (21)

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7. Citations (1)