|
1A2T
STAPHYLOCOCCAL NUCLEASE, B-MERCAPTOETHANOL DISULFIDE TO V23C VARIANT
Deposited 1998-01-11
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23C, B-MERCAPTOETHANOL DISULFIDE
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 8.15;277 K;10 MM POTASSIUM PHOSPHATE, PH 8.15 PROTEIN CONCENTRATION = 2 MGS/ML MPD =21% T=4 DEGREES C, temperature 277K
|
Resolution 1.96 Å
|
|
1A2U
STAPHYLOCOCCAL NUCLEASE, V23C VARIANT, COMPLEX WITH 1-N-BUTANE THIOL AND 3',5'-THYMIDINE DIPHOSPHATE
Deposited 1998-01-11
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23C, S-THIOBUTYL DISULFIDE
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 8.15;277 K;10 MM POTASSIUM PHOSPHATE, PH 8.15 PROTEIN CONCENTRATION = 2 MGS/ML MPD =21% T=4 DEGREES C, temperature 277K
|
Resolution 2.00 Å
|
|
1A3T
STAPHYLOCOCCAL NUCLEASE, V23C VARIANT, COMPLEX WITH 2-FLUOROETHANE THIOL AND 3',5'-THYMIDINE DIPHOSPHATE
Deposited 1998-01-24
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23C, S-THIOETHYLFLUORO DISULFIDE
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 8.15;277 K;10 MM POTASSIUM PHOSPHATE, PH 8.15 PROTEIN CONCENTRATION = 2 MGS/ML MPD =21% T=4 DEGREES C, temperature 277K
|
Resolution 2.10 Å
|
|
1A3U
STAPHYLOCOCCAL NUCLEASE, CYCLOHEXANE THIOL DISULFIDE TO V23C VARIANT
Deposited 1998-01-24
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23C, CYCLOHEXANE THIOL DISULFIDE
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 8.15;277 K;10 MM POTASSIUM PHOSPHATE, PH 8.15 PROTEIN CONCENTRATION = 2 MGS/ML MPD =21% T=4 DEGREES C, temperature 277K
|
Resolution 2.05 Å
|
|
1A3V
STAPHYLOCOCCAL NUCLEASE, CYCLOPENTANE THIOL DISULFIDE TO V23C VARIANT
Deposited 1998-01-24
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23C, CYCLOPENTANE THIOL DISULFIDE
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 8.15;277 K;10 MM POTASSIUM PHOSPHATE, PH 8.15 PROTEIN CONCENTRATION = 2 MGS/ML MPD =21% T=4 DEGREES C, temperature 277K
|
Resolution 2.20 Å
|
|
1AEX
STAPHYLOCOCCAL NUCLEASE, METHANE THIOL DISULFIDE TO V23C VARIANT
Deposited 1997-03-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23C
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 8.15;10 MM POTASSIUM PHOSPHATE, PH = 8.15, PROTEIN CONC. = 2 MGS/ML, MPD = 21%, T = 4 C
|
Resolution 2.10 Å
|
|
1ENA
CRYSTAL STRUCTURES OF THE BINARY CA2+ AND PDTP COMPLEXES AND THE TERNARY COMPLEX OF THE ASP 21->GLU MUTANT OF STAPHYLOCOCCAL NUCLEASE. IMPLICATIONS FOR CATALYSIS AND LIGAND BINDING
Deposited 1994-02-14
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
89–223(135 aa)
|
Not recorded
|
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 2.15 Å
|
|
1ENC
CRYSTAL STRUCTURES OF THE BINARY CA2+ AND PDTP COMPLEXES AND THE TERNARY COMPLEX OF THE ASP 21->GLU MUTANT OF STAPHYLOCOCCAL NUCLEASE. IMPLICATIONS FOR CATALYSIS AND LIGAND BINDING
Deposited 1994-02-14
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Not recorded
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 1.95 Å
|
|
1EQV
SIMPLIFICATION OF A PROTEIN LOOP IN STAPHYLOCOCCAL NUCLEASE
Deposited 2000-04-06
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
88–223(136 aa)
|
Mutation:Y113A, V114A, Y115A, K116A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
SMALL TUBES;pH 8.15;293 K;10.5 mM potassium phosphate, MPD, pH 8.15, SMALL TUBES, temperature 293K
|
Resolution 1.94 Å
|
|
1EY0
STRUCTURE OF WILD-TYPE S. NUCLEASE AT 1.6 A RESOLUTION
Deposited 2000-05-05
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;MPD, Sodium Phosphate Buffer, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.60 Å
R-free 0.255
|
|
1EY4
STRUCTURE OF S. NUCLEASE STABILIZING MUTANT S59A
Deposited 2000-05-05
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:S59A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;MPD,
Sodium phosphate buffer
, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.60 Å
R-free 0.256
|
|
1EY5
STRUCTURE OF S. NUCLEASE STABILIZING MUTANT T33V
Deposited 2000-05-05
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:T33V
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;MPD,
Sodium phosphate buffer, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.70 Å
R-free 0.266
|
|
1EY6
STRUCTURE OF S. NUCLEASE STABILIZING MUTANT T41I
Deposited 2000-05-05
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:T41I
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;MPD,
Sodium phosphate buffer, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.75 Å
R-free 0.263
|
|
1EY7
STRUCTURE OF S. NUCLEASE STABILIZING MUTANT S128A
Deposited 2000-05-05
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:S128A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;MPD,
Sodium phosphate buffer, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.88 Å
R-free 0.266
|
|
1EY8
STRUCTURE OF S. NUCLEASE STABILIZING TRIPLE MUTANT P117G/H124L/S128A
Deposited 2000-05-05
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:P117G,H124L,S128A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;MPD,
Sodium phosphate buffer, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.75 Å
R-free 0.240
|
|
1EY9
STRUCTURE OF S. NUCLEASE STABILIZING QUADRUPLE MUTANT T41I/P117G/H124L/S128A
Deposited 2000-05-05
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:T41I,P117G,H124L,S128A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;MPD,
Sodium phosphate buffer, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.72 Å
R-free 0.270
|
|
1EYA
STRUCTURE OF S. NUCLEASE STABILIZING QUINTUPLE MUTANT T33V/T41I/P117G/H124L/S128A
Deposited 2000-05-05
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:T33V,T41I,P117G,H124L,S128A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;MPD,
Sodium phosphate buffer, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.00 Å
R-free 0.288
|
|
1EYC
STRUCTURE OF S. NUCLEASE STABILIZING QUINTUPLE MUTANT T41I/S59A/P117G/H124L/S128A
Deposited 2000-05-05
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:T41I/S59A/P117G/H124L/S128A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;MPD,
Sodium phosphate buffer, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.85 Å
R-free 0.250
|
|
1EYD
STRUCTURE OF WILD-TYPE S. NUCLEASE AT 1.7 A RESOLUTION
Deposited 2000-05-05
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;MPD,
Sodium phosphate buffer, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.70 Å
R-free 0.277
|
|
1EZ6
STRUCTURE OF S. NUCLEASE STABILIZING SEXTUPLE MUTANT T33V/T41I/S59A/P117G/H124L/S128A
Deposited 2000-05-10
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:T33V/T41I/S59A/P117G/H124L/S128A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;MPD,
Sodium Phosphate Buffer, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.90 Å
R-free 0.279
|
|
1EZ8
STRUCTURE OF S. NUCLEASE STABILIZING MUTANT T33V
Deposited 2000-05-10
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:T33V
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;MPD,
Sodium phosphate buffer, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.85 Å
R-free 0.265
|
|
1F2M
SIMPLIFICATION OF A PROTEIN LOOP IN STAPHYLOCOCCAL NUCLEASE
Deposited 2000-05-26
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V114A,K116A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 8.15;pH 8.15
|
Resolution 2.00 Å
|
|
1F2Y
SIMPLIFICATION OF A PROTEIN LOOP IN STAPHYLOCOCCAL NUCLEASE
Deposited 2000-05-31
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:Y113A, K116A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
SMALL TUBES;pH 8.15;298 K;10.5 MM POTASSIUM PHOSPHATE, MPD, pH 8.15, SMALL TUBES, temperature 298K
|
Resolution 2.00 Å
|
|
1F2Z
SIMPLIFICATION OF A PROTEIN LOOP IN STAPHYLOCOCCAL NUCLEASE
Deposited 2000-05-31
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:YES
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
SMALL TUBES;pH 8.15;298 K;10.5 MM POTASSIUM PHOSPHATE, MPD, pH 8.15, SMALL TUBES, temperature 298K
|
Resolution 1.80 Å
|
|
1IHZ
Structure of S. nuclease mutant quintuple mutant V23L/V66L/I72L/I92L/V99L
Deposited 2001-04-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23L, V66L, I72L, I92L, V99L
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;MPD, SODIUM PHOSPHATE BUFFER, pH 8.00, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.65 Å
R-free 0.261
|
|
1II3
Structure of S. nuclease quintuple mutant V23I/V66L/I72L/I92L/V99L
Deposited 2001-04-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23I,V66L,I72L,I92L,V99L
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;MPD, SODIUM PHOSPHATE BUFFER, pH 8.00, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.72 Å
R-free 0.270
|
|
1JOK
Averaged structure for Staphylococcal nuclease-H124L in ternary complex with Ca2+ and thymidine-3',5'-bisphosphate
Deposited 2001-07-30
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:nuclease A
|
Mutation:H124L
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
SOLUTION NMR
NMR measurement conditions
pH 5.5;318 K;Ionic strength (raw mmCIF value) 300 nM KCl;Pressure ambient
NMR measurement conditions
pH 5.1;318 K;Ionic strength (raw mmCIF value) 300 nM KCl;Pressure ambient
NMR sample composition
3.5-5 mM Nuclease-H124L U-50% 2H; 300 mM KCl; D2O | D2O
NMR sample composition
3.5-5 mM Nuclease-H124L U-95% 15N; 300 mM KCl; H2O | H2O
NMR sample composition
3.5-5 mM Nuclease-H124L; 300 mM KCl; D2O | D2O
NMR sample composition
3.5-5 mM Nuclease-H124L U-50% 2H; 300 mM KCl; H2O | H2O
NMR sample composition
3.5-5 mM Nuclease-H124L U-98% 13C; 300 mM KCl; H2O | H2O
NMR sample composition
3.5-5 mM Nuclease-H124L U-98% 13C U-99% 15N; 300 mM KCl; H2O | H20
|
Resolution not provided
|
|
1JOO
Averaged structure for unligated Staphylococcal nuclease-H124L
Deposited 2001-07-30
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental conditions
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:nuclease A
|
Mutation:H124L
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 5.5;318 K;Ionic strength (raw mmCIF value) 300 nM KCl;Pressure ambient
NMR measurement conditions
pH 5.1;318 K;Ionic strength (raw mmCIF value) 300 nM KCl;Pressure ambient
NMR sample composition
3.5-5 mM Nuclease-H124L U-50% 2H; 300 mM KCl; D2O | D2O
NMR sample composition
3.5-5 mM Nuclease-H124L U-95% 15N; 300 mM KCl; H2O | H2O
NMR sample composition
3.5-5 mM Nuclease-H124L; 300 mM KCl; D2O | D2O
NMR sample composition
3.5-5 mM Nuclease-H124L U-50% 2H; 300 mM KCl; H2O | H2O
NMR sample composition
3.5-5 mM Nuclease-H124L U-98% 13C; 300 mM KCl; H2O | H2O
NMR sample composition
3.5-5 mM Nuclease-H124L U-98% 13C U-99% 15N; 300 mM KCl; H2O | H2O
|
Resolution not provided
|
|
1JOQ
Ensemble structures for Staphylococcal nuclease-H124L in ternary complex with Ca2+ and thymidine-3',5'-bisphosphate
Deposited 2001-07-30
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:nuclease A
|
Mutation:H124L
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
SOLUTION NMR
NMR measurement conditions
pH 5.5;318 K;Ionic strength (raw mmCIF value) 300 nM KCl;Pressure ambient
NMR measurement conditions
pH 5.1;318 K;Ionic strength (raw mmCIF value) 300 nM KCl;Pressure ambient
NMR sample composition
3.5-5 mM Nuclease-H124L U-50% 2H; 300 mM KCl; D2O | D2O
NMR sample composition
3.5-5 mM Nuclease-H124L U-95% 15N; 300 mM KCl; H2O | H2O
NMR sample composition
3.5-5 mM Nuclease-H124L; 300 mM KCl; D2O | D2O
NMR sample composition
3.5-5 mM Nuclease-H124L U-50% 2H; 300 mM KCl; H2O | H2O
NMR sample composition
3.5-5 mM Nuclease-H124L U-98% 13C; 300 mM KCl; H2O | H2O
NMR sample composition
3.5-5 mM Nuclease-H124L U-98% 13C U-99% 15N; 300 mM KCl; H2O | H2O
|
Resolution not provided
|
|
1JOR
Ensemble structures for unligated Staphylococcal nuclease-H124L
Deposited 2001-07-30
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental conditions
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:nuclease A
|
Mutation:H124L
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 5.5;318 K;Ionic strength (raw mmCIF value) 300 nM KCl;Pressure ambient
NMR measurement conditions
pH 5.1;318 K;Ionic strength (raw mmCIF value) 300 nM KCl;Pressure ambient
NMR sample composition
3.5-5 mM Nuclease-H124L U-50% 2H; 300 mM KCl; D2O | D2O
NMR sample composition
3.5-5 mM Nuclease-H124L U-95% 15N; 300 mM KCl; H2O | H2O
NMR sample composition
3.5-5 mM Nuclease-H124L; 300 mM KCl; D2O | D2O
NMR sample composition
3.5-5 mM Nuclease-H124L U-50% 2H; 300 mM KCl; H2O | H2O
NMR sample composition
3.5-5 mM Nuclease-H124L U-98% 13C; 300 mM KCl; H2O | H2O
NMR sample composition
3.5-5 mM Nuclease-H124L U-98% 13C U-99% 15N; 300 mM KCl; H2O | H2O
|
Resolution not provided
|
|
1KAA
STRESS AND STRAIN IN STAPHYLOCOCCAL NUCLEASE
Deposited 1992-12-18
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
88–223(136 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 1.90 Å
|
|
1KAB
STRESS AND STRAIN IN STAPHYLOCOCCAL NUCLEASE
Deposited 1992-12-18
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
88–223(136 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 1.80 Å
|
|
1KDA
STABILIZATION OF A STRAINED PROTEIN LOOP CONFORMATION THROUGH PROTEIN ENGINEERING
Deposited 1994-08-25
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 1.90 Å
|
|
1KDB
STABILIZATION OF A STRAINED PROTEIN LOOP CONFORMATION THROUGH PROTEIN ENGINEERING
Deposited 1994-08-25
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 1.90 Å
|
|
1KDC
STABILIZATION OF A STRAINED PROTEIN LOOP CONFORMATION THROUGH PROTEIN ENGINEERING
Deposited 1994-08-25
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 2.00 Å
|
|
1NSN
THE CRYSTAL STRUCTURE OF ANTIBODY N10-STAPHYLOCOCCAL NUCLEASE COMPLEX AT 2.9 ANGSTROMS RESOLUTION
Deposited 1995-06-06
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain S
83–231(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 2.80 Å
|
|
1NUC
STAPHYLOCOCCAL NUCLEASE, V23C VARIANT
Deposited 1997-02-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23C
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 8.15;277 K;10 MM POTASSIUM PHOSPHATE, PH = 8.15, PROTEIN CONC. = 2 MGS/ML, MPD = 21%, T = 4 C, temperature 277K
|
Resolution 1.90 Å
|
|
1RKN
Solution structure of 1-110 fragment of Staphylococcal Nuclease with G88W mutation
Deposited 2003-11-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental conditions
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–192(110 aa)
Fragment:residues 1-110
|
Mutation:G88W
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 4.9;305 K;Ionic strength (raw mmCIF value) 0.05;Pressure ambient
NMR sample composition
1-2mM G88W110-15N,13C labeled; 50mM Acetate buffer, DSS, NaN3; 90% H2O, 10% D2O | 90% H2O/10% D2O
NMR sample composition
1-2mM G88W110-13C labeled; 50mM Acetate buffer, DSS, NaN3; 100% D2O | 100% D2O
NMR sample composition
1-2mM G88W110-15N labeled; 50mM Acetate buffer, DSS, NaN3; 90% H2O, 10% D2O | 90% H2O/10% D2O
|
Resolution not provided
|
|
1SNC
THE CRYSTAL STRUCTURE OF THE TERNARY COMPLEX OF STAPHYLOCOCCAL NUCLEASE, CA2+, AND THE INHIBITOR PD*TP, REFINED AT 1.65 ANGSTROMS
Deposited 1989-07-21
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Not recorded
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 1.65 Å
|
|
1SND
STAPHYLOCOCCAL NUCLEASE DIMER CONTAINING A DELETION OF RESIDUES 114-119 COMPLEXED WITH CALCIUM CHLORIDE AND THE COMPETITIVE INHIBITOR DEOXYTHYMIDINE-3',5'-DIPHOSPHATE
Deposited 1996-08-23
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain A
83–231(149 aa)
Chain B
83–231(149 aa)
|
Mutation:DEL(114-119)
Mutation:DEL(114-119)
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 1.84 Å
|
|
1SND
STAPHYLOCOCCAL NUCLEASE DIMER CONTAINING A DELETION OF RESIDUES 114-119 COMPLEXED WITH CALCIUM CHLORIDE AND THE COMPETITIVE INHIBITOR DEOXYTHYMIDINE-3',5'-DIPHOSPHATE
Deposited 1996-08-23
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
83–231(149 aa)
Chain B
83–231(149 aa)
|
Mutation:DEL(114-119)
Mutation:DEL(114-119)
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 1.84 Å
|
|
1SNM
ACTIVE SITE MUTANT GLU-43 (RIGHT ARROW) ASP IN STAPHYLOCOCCAL NUCLEASE DISPLAYS NONLOCAL STRUCTURAL CHANGES
Deposited 1990-02-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:D43E
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 1.74 Å
|
|
1SNO
PROTEIN STABILITY IN STAPHYLOCOCCAL NUCLEASE
Deposited 1996-07-06
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 8.15;10.5 MM POTASSIUM PHOSPHATE, 20% - 30% 2-METHYL-2,4-PENTANEDIOL, pH 8.15
|
Resolution 1.70 Å
R-free 0.224
|
|
1SNP
PROTEIN STABILITY IN STAPHYLOCOCCAL NUCLEASE
Deposited 1996-07-06
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:P117G
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 8.15;10.5 MM POTASSIUM PHOSPHATE, 20% - 30% 2-METHYL-2,4-PENTANEDIOL, pH 8.15
|
Resolution 1.95 Å
R-free 0.255
|
|
1SNQ
PROTEIN STABILITY IN STAPHYLOCOCCAL NUCLEASE
Deposited 1996-07-06
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:P47G, P117G
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 8.15;10.5 MM POTASSIUM PHOSPHATE, 20% - 30% 2-METHYL-2,4-PENTANEDIOL, pH 8.15
|
Resolution 1.70 Å
R-free 0.274
|
|
1STA
ACCOMMODATION OF INSERTION MUTATIONS ON THE SURFACE AND IN THE INTERIOR OF STAPHYLOCOCCAL NUCLEASE
Deposited 1994-01-17
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–229(147 aa)
|
Not recorded
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 1.70 Å
|
|
1STB
ACCOMMODATION OF INSERTION MUTATIONS ON THE SURFACE AND IN THE INTERIOR OF STAPHYLOCOCCAL NUCLEASE
Deposited 1994-01-17
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–230(148 aa)
|
Not recorded
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 2.00 Å
|
|
1STG
TWO DISTINCTLY DIFFERENT METAL BINDING MODES ARE SEEN IN X-RAY CRYSTAL STRUCTURES OF STAPHYLOCOCCAL NUCLEASE-COBALT(II)-NUCLEOTIDE COMPLEXES
Deposited 1994-10-27
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Not recorded
|
CO COBALT (II) ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
COMPOUND
CRYSTAL SOAKED FOR ONE WEEK AT 277 K IN STABILIZING
BUFFER COMPRISING 40% (WW) MPD IN 30 MM TRIS-CL PH 8.15,
50 UM COCL2, 100 UM POTASSIUM CITRATE AND 50 UM PDTP.
|
Resolution 1.70 Å
|
|
1STH
TWO DISTINCTLY DIFFERENT METAL BINDING MODES ARE SEEN IN X-RAY CRYSTAL STRUCTURES OF STAPHYLOCOCCAL NUCLEASE-COBALT(II)-NUCLEOTIDE COMPLEXES
Deposited 1994-10-27
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Not recorded
|
CO COBALT (II) ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
CRYSTAL SOAKED FOR NINE MONTHS AT 277 K IN STABILIZING
BUFFER COMPRISING 40% (WW) MPD IN 30 MM TRIS-CL PH 8.15,
50 UM COCL2, 100 UM POTASSIUM CITRATE AND 50 UM PDTP.
SOME EVAPORATION OCCURRED DURING THIS PERIOD, SO MPD
CONCENTRATION AT TIME OF DATA COLLECTION, WHILE NOT
KNOWN PRECISELY, WAS SUBSTANTIALLY GREATER THAN 40%.
|
Resolution 1.85 Å
|
|
1STN
THE CRYSTAL STRUCTURE OF STAPHYLOCOCCAL NUCLEASE REFINED AT 1.7 ANGSTROMS RESOLUTION
Deposited 1993-02-17
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 1.70 Å
|
|
1STY
THE ALPHA ANEURISM: A STRUCTURAL MOTIF REVEALED IN AN INSERTION MUTANT OF STAPHYLOCOCCAL NUCLEASE
Deposited 1993-02-18
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–230(148 aa)
|
Not recorded
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 1.67 Å
|
|
1SYB
TRANSFER OF A BETA-TURN STRUCTURE TO A NEW PROTEIN CONTEXT
Deposited 1994-01-07
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Not recorded
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 1.80 Å
|
|
1SYC
ENGINEERING ALTERNATIVE BETA-TURN TYPES IN STAPHYLOCOCCAL NUCLEASE
Deposited 1994-01-07
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 1.80 Å
|
|
1SYD
ENGINEERING ALTERNATIVE BETA-TURN TYPES IN STAPHYLOCOCCAL NUCLEASE
Deposited 1994-01-07
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Not recorded
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 1.70 Å
|
|
1SYE
ENGINEERING ALTERNATIVE BETA-TURN TYPES IN STAPHYLOCOCCAL NUCLEASE
Deposited 1994-01-07
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 1.80 Å
|
|
1SYF
ENGINEERING ALTERNATIVE BETA-TURN TYPES IN STAPHYLOCOCCAL NUCLEASE
Deposited 1994-01-07
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Not recorded
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 1.80 Å
|
|
1SYG
ENGINEERING ALTERNATIVE BETA-TURN TYPES IN STAPHYLOCOCCAL NUCLEASE
Deposited 1994-01-07
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 1.90 Å
|
|
1TQO
Cryogenic Crystal Structure of Staphylococcal Nuclease Variant truncated Delta+PHS I92E
Deposited 2004-06-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–226(144 aa)
|
Mutation:G50F, V51N, I92E, P117G, H124L, S128A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;300 K;MPD, potassium phosphate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 27K
|
Resolution 2.00 Å
R-free 0.249
|
|
1TR5
Room temperature structure of Staphylococcal nuclease variant truncated Delta+PHS I92E
Deposited 2004-06-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–226(144 aa)
|
Mutation:Deleteion of residues 44-49 and 145-149; point mutations G50F, V51N, I92E, P117G, H124L and S128A
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;MPD, potassium phosphate, glycerol, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.10 Å
R-free 0.250
|
|
1TT2
Cryogenic crystal structure of Staphylococcal nuclease variant truncated Delta+PHS I92K
Deposited 2004-06-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–226(144 aa)
|
Mutation:Deletion of residues 44-49 and 145-149; point mutations G50F, V51N, I92K, P117G, H124L, S128A
|
CA CALCIUM ION × 1
DMS DIMETHYL SULFOXIDE × 2
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8.1;277 K;MPD, potassium phosphate, glycerol, DMSO, pH 8.1, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.85 Å
R-free 0.211
|
|
1U9R
Crystal Structure of Staphylococcal Nuclease mutant V66E/P117G/H124L/S128A at Room Temperature
Deposited 2004-08-10
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V66E/P117G/H124L/S128A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.4;277 K;MPD, potassium phosphate, pH 6.4, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.10 Å
R-free 0.217
|
|
2ENB
CRYSTAL STRUCTURES OF THE BINARY CA2+ AND PDTP COMPLEXES AND THE TERNARY COMPLEX OF THE ASP 21->GLU MUTANT OF STAPHYLOCOCCAL NUCLEASE. IMPLICATIONS FOR CATALYSIS AND LIGAND BINDING
Deposited 1994-03-23
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
89–223(135 aa)
|
Not recorded
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 2.05 Å
|
|
2EXZ
Crystal structure of Staphylococcal nuclease mutant T22C
Deposited 2005-11-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:T22C
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.90 Å
R-free 0.265
|
|
2EY1
Crystal structure of Staphylococcal nuclease mutant T22V
Deposited 2005-11-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:T22V
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.85 Å
R-free 0.264
|
|
2EY2
Crystal structure of Staphylococcal nuclease mutant T41C
Deposited 2005-11-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:T41C
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.70 Å
R-free 0.266
|
|
2EY5
Crystal structure of Staphylococcal nuclease mutant T41S
Deposited 2005-11-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:T41S
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.00 Å
R-free 0.270
|
|
2EY6
Crystal structure of Staphylococcal nuclease mutant T41V
Deposited 2005-11-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:T41V
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.65 Å
R-free 0.247
|
|
2EYF
Crystal structure of Staphylococcal nuclease mutant T44V
Deposited 2005-11-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:T44V
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 1.80 Å
R-free 0.266
|
|
2EYH
Crystal structure of Staphylococcal nuclease mutant T62S
Deposited 2005-11-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:T62S
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.90 Å
R-free 0.261
|
|
2EYJ
Crystal structure of Staphylococcal nuclease mutant T62V
Deposited 2005-11-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:T62V
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.85 Å
R-free 0.235
|
|
2EYL
Crystal structure of Staphylococcal nuclease mutant T82S
Deposited 2005-11-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:T82S
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.70 Å
R-free 0.249
|
|
2EYM
Crystal structure of Staphylococcal nuclease mutant T120C
Deposited 2005-11-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:T120C
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.80 Å
R-free 0.263
|
|
2EYO
Crystal structure of Staphylococcal nuclease mutant T120S
Deposited 2005-11-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:T120S
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.70 Å
R-free 0.238
|
|
2EYP
Crystal structure of Staphylococcal nuclease mutant T120V
Deposited 2005-11-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:T120V
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.80 Å
R-free 0.251
|
|
2F0D
Crystal structure of Staphylococcal nuclease mutant I92V
Deposited 2005-11-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:I92V
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.50 Å
R-free 0.162
|
|
2F0E
Crystal structure of Staphylococcal nuclease mutant V23L
Deposited 2005-11-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23L
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.95 Å
R-free 0.254
|
|
2F0F
Crystal structure of Staphylococcal nuclease mutant L25I
Deposited 2005-11-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:L25I
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.15 Å
R-free 0.288
|
|
2F0G
Crystal structure of Staphylococcal nuclease mutant V66I
Deposited 2005-11-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V66I
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.90 Å
R-free 0.252
|
|
2F0H
Crystal structure of Staphylococcal nuclease mutant V66L
Deposited 2005-11-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V66L
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.15 Å
R-free 0.282
|
|
2F0I
Crystal structure of Staphylococcal nuclease mutant I72L
Deposited 2005-11-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:I72L
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.80 Å
R-free 0.271
|
|
2F0J
Crystal structure of Staphylococcal nuclease mutant I72V
Deposited 2005-11-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:I72V
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.80 Å
R-free 0.251
|
|
2F0K
Crystal structure of Staphylococcal nuclease mutant V23I/L25I
Deposited 2005-11-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23I/L25I
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.90 Å
R-free 0.262
|
|
2F0L
Crystal structure of Staphylococcal nuclease mutant V23L/I72L
Deposited 2005-11-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23L/I72L
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.90 Å
R-free 0.264
|
|
2F0M
Crystal structure of Staphylococcal nuclease mutant V23L/I72V
Deposited 2005-11-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23L/I72V
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.00 Å
R-free 0.266
|
|
2F0N
Crystal structure of Staphylococcal nuclease mutant L25I/I72L
Deposited 2005-11-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:L25I/I72L
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.70 Å
R-free 0.280
|
|
2F0O
Crystal structure of Staphylococcal nuclease mutant V66I/I72V
Deposited 2005-11-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V66I/I72V
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.90 Å
R-free 0.255
|
|
2F0P
Crystal structure of Staphylococcal nuclease mutant V66I/V99I
Deposited 2005-11-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V66I/V99I
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.05 Å
R-free 0.258
|
|
2F0Q
Crystal structure of Staphylococcal nuclease mutant V66L/I92L
Deposited 2005-11-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V66L/I92L
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.95 Å
R-free 0.270
|
|
2F0S
Crystal structure of Staphylococcal nuclease mutant V66L/I92V
Deposited 2005-11-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V66L/I92V
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.75 Å
R-free 0.270
|
|
2F0T
Crystal structure of Staphylococcal nuclease mutant V66L/V99I
Deposited 2005-11-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V66L/V99I
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.70 Å
R-free 0.274
|
|
2F0U
Crystal structure of Staphylococcal nuclease mutant V23I/L25I/I72V
Deposited 2005-11-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23I/L25I/I72V
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.83 Å
R-free 0.243
|
|
2F0V
Crystal structure of Staphylococcal nuclease mutant V23L/V66L/I72L
Deposited 2005-11-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23L/V66L/I72L
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.00 Å
R-free 0.254
|
|
2F0W
Crystal structure of Staphylococcal nuclease mutant V23I/L25I/V66L/I72L
Deposited 2005-11-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23I/L25I/V66L/I72L
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer, 45% MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.10 Å
R-free 0.277
|
|
2F3V
Solution structure of 1-110 fragment of staphylococcal nuclease with V66W mutation
Deposited 2005-11-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental conditions
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–192(110 aa)
Fragment:Residues 1-110
|
Mutation:V66W
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 4.9;298 K;Ionic strength (raw mmCIF value) 50mM ACETATE BUFFER;Pressure ambient
NMR sample composition
2mM V66W110 fragment, 50MM ACETATE BUFFER, DSS, NAN3; 90% H2O, 10% D2O | 90% H2O/10% D2O
|
Resolution not provided
|
|
2F3W
solution structure of 1-110 fragment of staphylococcal nuclease in 2M TMAO
Deposited 2005-11-22
|
Different construct
Different oligomeric state
Different experimental conditions
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–192(110 aa)
Fragment:residues 1-110
|
Not recorded
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 6;298 K;Ionic strength (raw mmCIF value) 2M TMAO, 0.2M HCl;Pressure ambient
NMR sample composition
1mM SNase110 fragment, 2M TMAO, 0.2M HCl, DSS, NAN3; 90% H2O, 10% D2O | 90% H2O/10% D2O
|
Resolution not provided
|
|
2FXY
Solution structure of 55-72 segment of staphylococcal nuclease
Deposited 2006-02-07
|
Different construct
Different oligomeric state
Different experimental conditions
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
137–154(18 aa)
|
Not recorded
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 5;298 K;Ionic strength (raw mmCIF value) 0;Pressure ambient
NMR sample composition
2.0mM peptides; DSS, NaN3; 40% trifluoroethanol-d4, 60% H2O | 40% trifluoroethanol-d4, 60% H2O
NMR sample composition
2.0mM peptides; DSS, NaN3; 40% trifluoroethanol-d4, 60% D2O | 40% trifluoroethanol-d4, 60% D2O
|
Resolution not provided
|
|
2FXZ
Solution structure of 97-109 segment of staphylococcal nuclease
Deposited 2006-02-07
|
Different construct
Different oligomeric state
Different experimental conditions
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
179–191(13 aa)
|
Not recorded
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 5;298 K;Ionic strength (raw mmCIF value) 0;Pressure ambient
NMR sample composition
2.0mM peptides; DSS, NaN3; 40% trifluoroethanol-d4, 60% H2O | 40% trifluoroethanol-d4, 60% H2O
NMR sample composition
2.0mM peptides; DSS, NaN3; 40% trifluoroethanol-d4, 60% D2O | 40% trifluoroethanol-d4, 60% D2O
|
Resolution not provided
|
|
2KHS
Solution structure of SNase121:SNase(111-143) complex
Deposited 2009-04-10
|
Different construct
Different experimental conditions
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
83–203(121 aa)
Fragment:UNP residues 83-203
|
Not recorded
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 5;300 K;Ionic strength (raw mmCIF value) 0.15;Pressure ambient
NMR sample composition
1.0 mM [U-13C; U-15N] protein-1, 1.0 mM protein-2, 50 mM sodium acetate-3, 100 mM potassium chloride-4, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition
1.0 mM protein-1, 1.0 mM [U-13C; U-15N] protein-2, 50 mM sodium acetate-7, 100 mM potassium chloride-8, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition
1 mM [U-13C] protein-1, 1 mM [U-15N] protein-2, 50 mM sodium acetate-11, 100 mM potassium chloride-12, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition
1 mM [U-15N] protein-1, 1 mM [U-13C] protein-2, 50 mM sodium acetate-15, 100 mM potassium chloride-16, 90% H2O/10% D2O | 90% H2O/10% D2O
|
Resolution not provided
|
|
2NUC
STAPHLOCOCCAL NUCLEASE, ETHANE THIOL DISULFIDE TO V23C VARIANT
Deposited 1997-12-06
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23C
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 8.15;10 MM POTASSIUM PHOSPHATE, PH 8.15 PROTEIN CONCENTRATION 2 MGS/ML, 21 PERCENT MPD, AT 4C.
|
Resolution 2.00 Å
|
|
2OEO
Cryogenic crystal structure of Staphylococcal Nuclease variant truncated Delta+PHS I92D
Deposited 2006-12-30
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
80–223(144 aa)
|
Mutation:G50F, V51N, I92D, P117G, H124L, S128A
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;20-35% MPD, 10% glycerol, 5% DMSO, 10.5 mM potassium phosphate in the presence of Ca2+ and pdTp, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277.0K
|
Resolution 2.00 Å
R-free 0.226
|
|
2OF1
Cryogenic crystal structure of the Staphylococcal Nuclease variant truncated Delta+PHS I92W
Deposited 2007-01-02
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
80–223(144 aa)
|
Mutation:G50F, V51N, I92W, P117G, H124L, S128A
|
CA CALCIUM ION × 1
DMS DIMETHYL SULFOXIDE × 2
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;291 K;20-30% MPD, 10.5 mM potassium phosphate, 5% glycerol, 5% DMSO, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
|
Resolution 1.92 Å
R-free 0.244
|
|
2QDB
Crystal structure of staphylococcal nuclease variant E75Q/D21N/T33V/T41I/S59A/P117G/S128A at 100 K
Deposited 2007-06-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A
|
Mutation:E75Q,D21N,T33V,T41I,S59A,P117G,S128A
|
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;38% MPD and 25 mM potassium phosphate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.20 Å
R-free 0.276
|
|
2RBM
Crystal structure of Staphylococcal nuclease variant Delta+PHS I72K at cryogenic temperature
Deposited 2007-09-19
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:G50F,V51N,I72K,P117G,S128A,Del44-49
|
CA CALCIUM ION × 1
PO4 PHOSPHATE ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;33% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.90 Å
R-free 0.238
|
|
2RDF
Crystal Structure of staphyloccocal nuclease VIAGAN/E75A variant at cryogenic temperature
Deposited 2007-09-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A
|
Mutation:E75A,D21N,T33V,T41I,S59A,P117G,S128A
|
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;37% MPD, 25 mM potassium phosphate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.01 Å
R-free 0.244
|
|
2RKS
Crystal structure of Staphylococcal nuclease variant PHS L38K at cryogenic temperature
Deposited 2007-10-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:nuclease
|
Mutation:L38K,P117G,H124L,S128A
|
PO4 PHOSPHATE ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 10.5;277 K;45% MPD, 50 mM Potassium Phosphate, pH 10.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.01 Å
R-free 0.240
|
|
2SNM
IN A STAPHYLOCOCCAL NUCLEASE MUTANT THE SIDE-CHAIN of A LYSINE REPLACING VALINE 66 IS FULLY BURIED IN THE HYDROPHOBIC CORE
Deposited 1991-04-03
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V66K
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 1.97 Å
|
|
2SNS
STAPHYLOCOCCAL NUCLEASE. PROPOSED MECHANISM OF ACTION BASED ON STRUCTURE OF ENZYME-THYMIDINE 3(PRIME),5(PRIME)-BIPHOSPHATE-CALCIUM ION COMPLEX AT 1.5-ANGSTROMS RESOLUTION
Deposited 1982-05-14
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Not recorded
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 1.50 Å
|
|
2SOB
SN-OB, OB-FOLD SUB-DOMAIN OF STAPHYLOCOCCAL NUCLEASE, NMR, 10 STRUCTURES
Deposited 1995-09-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental conditions
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–185(103 aa)
|
Mutation:V66L, G88V, DEL(104-109)
|
No recorded non-water small molecule
|
SOLUTION NMR
mmCIF provides none of the parsed conditions
|
Resolution not provided
|
|
3BDC
Crystal structure of Staphylococcal nuclease variant Delta+PHS at cryogenic temperature
Deposited 2007-11-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:G50F/V51N/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;17% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 8.0, vapor diffusion, hanging drop, temperature 277K
|
Resolution 1.80 Å
R-free 0.251
|
|
3C1E
Crystal structure of Staphylococcal nuclease variant Delta+PHS L125K at cryogenic temperature
Deposited 2008-01-23
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:G50F, V51N, P117G, L125K, H124L, S128A
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;32% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 9.0, vapor diffusion, hanging drop, temperature 277K
|
Resolution 1.90 Å
R-free 0.253
|
|
3C1F
Crystal structure of Staphylococcal nuclease variant Delta+PHS V104K at cryogenic temperature
Deposited 2008-01-23
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:G50F, V51N, V104K, P117G, H124L, S128A
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;40% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.00 Å
R-free 0.261
|
|
3D4D
Crystal structure of Staphylococcal nuclease variant Delta+PHS Y91E at cryogenic temperature
Deposited 2008-05-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:G50F,V51N,Y91E,P117G,H124L,S128A,Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;25% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 8.0, vapor diffusion, hanging drop, temperature 277K
|
Resolution 2.10 Å
R-free 0.290
|
|
3D4D
Crystal structure of Staphylococcal nuclease variant Delta+PHS Y91E at cryogenic temperature
Deposited 2008-05-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
83–231(149 aa)
|
Mutation:G50F,V51N,Y91E,P117G,H124L,S128A,Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;25% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 8.0, vapor diffusion, hanging drop, temperature 277K
|
Resolution 2.10 Å
R-free 0.290
|
|
3D6C
Crystal structure of Staphylococcal nuclease variant PHS L38E at cryogenic temperature
Deposited 2008-05-19
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:sequence database residues 83-231
|
Mutation:L38E,P117G,H124L,S128A
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;35% MPD, 25 mM Potassium Phosphate, Calcium chloride, PTP, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.00 Å
R-free 0.234
|
|
3DHQ
Crystal structure of Staphylococcal nuclease variant Delta+PHS A90R at cryogenic temperature
Deposited 2008-06-18
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:nuclease
|
Mutation:G50F/V51N/A90R/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;24% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTP, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.15 Å
R-free 0.276
|
|
3DMU
Crystal structure of Staphylococcal nuclease variant PHS T62K at cryogenic temperature
Deposited 2008-07-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:T62K/P117G/H124L/S128A
|
PO4 PHOSPHATE ION × 1
MPD (4S)-2-METHYL-2,4-PENTANEDIOL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;44% MPD, 25 mM Potassium Phosphate, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.80 Å
R-free 0.255
|
|
3E5S
Crystal structure of Staphylococcal nuclease variant Delta+PHS L103K at cryogenic temperature
Deposited 2008-08-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:G50F/V51N/L103K/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;298 K;35% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 2.00 Å
R-free 0.224
|
|
3E5S
Crystal structure of Staphylococcal nuclease variant Delta+PHS L103K at cryogenic temperature
Deposited 2008-08-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
83–231(149 aa)
|
Mutation:G50F/V51N/L103K/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;298 K;35% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 2.00 Å
R-free 0.224
|
|
3ERO
Crystal structure of Staphylococcal nuclease variant Delta+PHS I72E at cryogenic temperature
Deposited 2008-10-02
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:G50F/V51N/I72E/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;20% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, Soaked in higher % MPD before freezing, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.85 Å
R-free 0.226
|
|
3ERQ
Crystal structure of Staphylococcal nuclease variant L25K at cryogenic temperature
Deposited 2008-10-02
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:L25K/G50F/V51N/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;22% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, Soaked in higher % MPD before freezing, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.10 Å
R-free 0.278
|
|
3EVQ
Crystal structure of Staphylococcal nuclease variant Delta+PHS L25E at cryogenic temperature
Deposited 2008-10-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:L25E/G50F/V51N/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;20% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, Soaked in higher % MPD before freezing, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.00 Å
R-free 0.258
|
|
3H6M
Crystal structure of Staphylococcal nuclease variant Delta+PHS V104E at cryogenic temperature
Deposited 2009-04-23
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:44-49 deletion, G50F, V51N, V104E, P117G, H124L, S128A
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;30% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.70 Å
R-free 0.222
|
|
3HEJ
Crystal structure of Staphylococcal nuclease variant Delta+PHS T62R at cryogenic temperature
Deposited 2009-05-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
83–231(149 aa)
Chain D
83–231(149 aa)
|
Mutation:G50F, V51N, T62R, P117G, H124L, S128A, Del44-49
Mutation:G50F, V51N, T62R, P117G, H124L, S128A, Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 2
MPD (4S)-2-METHYL-2,4-PENTANEDIOL × 1
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;24% MPD, 25 mM Potassium Phosphate, Calcium Chloride, 5% Glycerol, pdTp, pH 8.0, vapor diffusion, hanging drop, temperature 277K
|
Resolution 1.80 Å
R-free 0.244
|
|
3HEJ
Crystal structure of Staphylococcal nuclease variant Delta+PHS T62R at cryogenic temperature
Deposited 2009-05-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain B
83–231(149 aa)
Chain C
83–231(149 aa)
|
Mutation:G50F, V51N, T62R, P117G, H124L, S128A, Del44-49
Mutation:G50F, V51N, T62R, P117G, H124L, S128A, Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 2
GOL GLYCEROL × 1
MRD (4R)-2-METHYLPENTANE-2,4-DIOL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;24% MPD, 25 mM Potassium Phosphate, Calcium Chloride, 5% Glycerol, pdTp, pH 8.0, vapor diffusion, hanging drop, temperature 277K
|
Resolution 1.80 Å
R-free 0.244
|
|
3HZX
Crystal Structure of Staphylococcal nuclease variant D+PHS/V66K at pH 9 determined at 100 K
Deposited 2009-06-24
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:G50F/V51N/V66K/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;39 % MPD, 25 mM Potassium phosphate, pdTp, CaCl2, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.00 Å
R-free 0.237
|
|
3ITP
Crystal structure of Staphylococcal nuclease variant Delta+PHS F34K at cryogenic temperature
Deposited 2009-08-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:F34K, G50F, V51N, P117G, H124L, S128A, Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;29%(w/v) MPD, 25 mM Potassium Phosphate, Calcium Chloride (3 M eq), pdTp (2 M eq), 5.5 (mg protein)/mL in stock solution; 4uL protein stock and 4uL well solution per drop; 1-2 weeks of growth, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.75 Å
R-free 0.235
|
|
3LX0
Crystal structure of Staphylococcal nuclease variant Delta+PHS D21N at cryogenic temperature
Deposited 2010-02-24
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:residues 83-231, Deletion 126-131
|
Mutation:D103N,G132F,V133N,P117G,H199L,S210A
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;38% MPD, 25mM Potassium Phosphate, Calcium Chloride, pdTp, pH 6.0, vapor diffusion, hanging drop, temperature 277K
|
Resolution 1.50 Å
R-free 0.222
|
|
3MEH
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92A at cryogenic temperature
Deposited 2010-03-31
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Deletion UNP residues 126-131
|
Mutation:G50F,V51N,I92A,P117G,H124L,S128A
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;20% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 8.0, vapor diffusion, hanging drop, temperature 277K
|
Resolution 1.50 Å
R-free 0.234
|
|
3MHB
Crystal structure of Staphylococcal nuclease variant Delta+PHS L38A at cryogenic temperature
Deposited 2010-04-07
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Deletion UNP residues 126-131
|
Mutation:L38A,G50F,V51N,P117G,H124L,S128A
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;25% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.55 Å
R-free 0.238
|
|
3MVV
Crystal structure of Staphylococcal nuclease variant Delta+PHS F34A at cryogenic temperature
Deposited 2010-05-04
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Deletion UNP residues 126-131
|
Mutation:F34A,G132F,V133N,P199G,S210A
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;25% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 9.0, vapor diffusion, hanging drop, temperature 277K
|
Resolution 1.72 Å
R-free 0.230
|
|
3MXP
Crystal structure of Staphylococcal nuclease variant Delta+PHS T62A at cryogenic temperature
Deposited 2010-05-07
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Deletion UNP residues 126-131
|
Mutation:G50F,V51N,T62A,P117G,H124L,S128A
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;25% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.61 Å
R-free 0.247
|
|
3MZ5
Crystal structure of Staphylococcal nuclease variant Delta+PHS L103A at cryogenic temperature
Deposited 2010-05-11
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Deletion UNP residues 126-131
|
Mutation:G50F,V51N,L103A,P117G,H124L,S128A
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;20% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.58 Å
R-free 0.238
|
|
3NHH
Crystal structure of Staphylococcal nuclease variant V23E-L36K at cryogenic temperature
Deposited 2010-06-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23E, L36K, G50F, V51N, P117G, H124L, S128A
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;22% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.00 Å
R-free 0.255
|
|
3NK9
Crystal structure of Staphylococcal nuclease variant Delta+PHS V74A at cryogenic temperature
Deposited 2010-06-18
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:G50F, V51N, V74A, P117G, H124L, S128A
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;22% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 8.0, vapor diffusion, hanging drop, temperature 277K
|
Resolution 1.65 Å
R-free 0.224
|
|
3NP8
Crystal structure of Staphylococcal nuclease variant Delta+PHS L36A at cryogenic temperature
Deposited 2010-06-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Deletion UNP residues 126-131
|
Mutation:L36A,G50F,V51N,P117G,H124L,S128A
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;20% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 6.0, vapor diffusion, hanging drop, temperature 277K
|
Resolution 1.70 Å
R-free 0.230
|
|
3NQT
Crystal structure of Staphylococcal nuclease variant Delta+PHS V66A at cryogenic temperature
Deposited 2010-06-29
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Deletion UNP residues 126-131
|
Mutation:G50F,V51N,V66A,P117G,H124L,S128A
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;28% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 7.0, vapor diffusion, hanging drop, temperature 277K
|
Resolution 1.90 Å
R-free 0.246
|
|
3NUC
STAPHLOCOCCAL NUCLEASE, 1-N-PROPANE THIOL DISULFIDE TO V23C VARIANT
Deposited 1997-12-06
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23C
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 8.15;10 MM POTASSIUM PHOSPHATE, PH 8.15, PROTEIN CONCENTRATION 2 MGS/ML, 21 PERCENT MPD AT 4C.
|
Resolution 1.90 Å
|
|
3NXW
Crystal structure of Staphylococcal nuclease variant Delta+PHS L125A at cryogenic temperature
Deposited 2010-07-14
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Deletion UNP residues 126-131
|
Not recorded
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;29% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 9.0, vapor diffusion, hanging drop, temperature 277K
|
Resolution 1.65 Å
R-free 0.238
|
|
3OSO
Crystal structure of Staphylococcal nuclease variant Delta+PHS L25A at cryogenic temperature
Deposited 2010-09-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Deletion UNP residues 126-131
|
Mutation:L25A, G132P, V133N, P199G, H206L, S210A
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;25% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 7.0, vapor diffusion, hanging drop, temperature 277K
|
Resolution 1.60 Å
R-free 0.206
|
|
3OWF
Crystal structure of Staphylococcal nuclease variant Delta+PHS V66R at cryogenic temperature
Deposited 2010-09-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
83–231(149 aa)
|
Mutation:G50F/V51N/V66R/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 2
CA CALCIUM ION × 2
PO4 PHOSPHATE ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 7;277 K;19% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.85 Å
R-free 0.213
|
|
3P1H
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23K/I92A at cryogenic temperature
Deposited 2010-09-30
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Deletion UNP residues 126-131
|
Mutation:V23K,G50F,V51N,I92A,P117G,H124L,S128A
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;27% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.79 Å
R-free 0.231
|
|
3P75
Crystal structure of Staphylococcal nuclease variant Delta+PHS V104D at cryogenic temperature
Deposited 2010-10-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
89–223(135 aa)
|
Mutation:G50F/V51N/V104D/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 2
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9.5;277 K;35% MPD(w/v), 25 mM CHES, Calcium Chloride, pdTp, pH 9.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.90 Å
R-free 0.239
|
|
3PMF
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23A at cryogenic temperature
Deposited 2010-11-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Deletion UNP residues 126-131
|
Mutation:V23A, G44F, V45N, P111G, H118L, S122A
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;22% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 7.0, vapor diffusion, hanging drop, temperature 277K
|
Resolution 1.60 Å
R-free 0.213
|
|
3QB3
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92KL25A at cryogenic temperature
Deposited 2011-01-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:UNP L107A,G132F,V133N,I174K,P199G,H206L,S210A, del(126-131)
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;27% MPD, 25 mM potassium phosphate, 4.5 mg/mL (0.28 mM) protein, 0.84 mM calcium chloride, 0.56 mM pdTp, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.63 Å
R-free 0.208
|
|
3QOJ
Cryogenic structure of Staphylococcal nuclease variant D+PHS/V23K
Deposited 2011-02-10
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:V23K,G50F,V51N,P117G,H124L,S128A, del(44-49)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;24% MPD, 25 mM potassium phosphate, pdTp (2 eq.), calcium chloride (3 eq.), pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.60 Å
R-free 0.228
|
|
3QOL
Crystal structure of Staphylococcal nuclease variant D+PHS/V23E at pH 6 determined at 100 K
Deposited 2011-02-10
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
41–189(149 aa)
Fragment:DELETION UNP RESIDUES 126-131
|
Mutation:V23E,G50F,V51N,P117G,H124L,S128A
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 6;277 K;22% MPD, 25 mM Potassium Phosphate, pdTp, CaCl2, pH 6, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.90 Å
R-free 0.227
|
|
3R3O
Crystal structure of Staphylococcal nuclease variant Delta+PHS T62A at cryogenic temperature and with high redundancy
Deposited 2011-03-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:UNP G132F,V133N,T144A,P199G,H206L,S210A,del(126-131)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;21% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.90 Å
R-free 0.223
|
|
3RUZ
Crystal structure of Staphylococcal nuclease variant Delta+PHS V74K at cryogenic temperature
Deposited 2011-05-05
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F,V51N,V74K,P117G,H124L,S128A, del(44-49)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.58 Å
R-free 0.207
|
|
3S9W
Crystal structure of Staphylococcal nuclease variant Delta+PHS M98G bound to Ca2+ and thymidine-5',3'-diphosphate at cryogenic temperature
Deposited 2011-06-02
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F/V51N/M98G/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.90 Å
R-free 0.211
|
|
3SHL
Crystal structure of Staphylococcal nuclease variant Delta+PHS V74KL25A at cryogenic temperature
Deposited 2011-06-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:L25A,G50F,V51N,V74K,P117G,H124L,S128A, del(44-49)
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;30% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.48 Å
R-free 0.216
|
|
3SK4
Crystal structure of Staphylococcal nuclease variant Delta+PHS D21N/V23E at cryogenic temperature
Deposited 2011-06-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:D21N/V23E/G50F/V51N/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;25% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.85 Å
R-free 0.228
|
|
3SK5
Crystal structure of Staphylococcal nuclease variant Delta+PHS V39D at cryogenic temperature
Deposited 2011-06-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:V39D/G50F/V51N/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;26% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.70 Å
R-free 0.213
|
|
3SK6
Crystal structure of Staphylococcal nuclease variant Delta+NVIAGLA V23K/L36E at cryogenic temperature
Deposited 2011-06-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:D21N/V23K/T33V/L36E/T41I/G50F/V51N/S59A/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
MRD (4R)-2-METHYLPENTANE-2,4-DIOL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;30% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.80 Å
R-free 0.238
|
|
3SK8
Crystal structure of Staphylococcal nuclease variant Delta+PHS M98G apo protein at cryogenic temperature
Deposited 2011-06-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F/V51N/M98G/P117G/H124L/S128A/Del44-49
|
PO4 PHOSPHATE ION × 2
MPD (4S)-2-METHYL-2,4-PENTANEDIOL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;34% MPD, 25 mM potassium phosphate, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.90 Å
R-free 0.210
|
|
3SR1
Crystal structure of Staphylococcal nuclease variant Delta+PHS A69G bound to Ca2+ and thymidine-5',3'-diphosphate at cryogenic temperature
Deposited 2011-07-06
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F/V51N/A69G/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;25% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.45 Å
R-free 0.202
|
|
3SXH
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92AL103A at cryogenic temperature
Deposited 2011-07-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F,V51N,I92A,L103A,P117G,H124L,S128A, del(44-49)
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.40 Å
R-free 0.199
|
|
3T13
Crystal structure of Staphylococcal nuclease variant Delta+PHS A69G at cryogenic temperature
Deposited 2011-07-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F/V51N/A69G/P117G/H124L/S128A/Del44-49
|
PO4 PHOSPHATE ION × 2
CA CALCIUM ION × 1
MRD (4R)-2-METHYLPENTANE-2,4-DIOL × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;41% MPD, 25 mM potassium phosphate, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.80 Å
R-free 0.199
|
|
3T13
Crystal structure of Staphylococcal nuclease variant Delta+PHS A69G at cryogenic temperature
Deposited 2011-07-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F/V51N/A69G/P117G/H124L/S128A/Del44-49
|
PO4 PHOSPHATE ION × 1
CA CALCIUM ION × 1
MRD (4R)-2-METHYLPENTANE-2,4-DIOL × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;41% MPD, 25 mM potassium phosphate, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.80 Å
R-free 0.199
|
|
3T16
Crystal structure of Staphylococcal nuclease variant NVIAGA/M98G at cryogenic temperature
Deposited 2011-07-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:D21N/T33V/T41I/S59A/M98G/P117G/S128A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;41% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.80 Å
R-free 0.211
|
|
3TME
Crystal structure of Staphylococcal nuclease variant Delta+NVIAGLA V23E at cryogenic temperature
Deposited 2011-08-31
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:D21N/V23E/T33V/T41I/G50F/V51N/S59A/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
MRD (4R)-2-METHYLPENTANE-2,4-DIOL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;38% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.40 Å
R-free 0.208
|
|
3TP5
Crystal structure of Staphylococcal nuclease variant Delta+NVIAGLA V23E/L36E at cryogenic temperature
Deposited 2011-09-07
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:D21N/V23E/T33V/L36E/T41I/G50F/V51N/S59A/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
MPD (4S)-2-METHYL-2,4-PENTANEDIOL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;31% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.80 Å
R-free 0.231
|
|
3TP6
Crystal structure of Staphylococcal nuclease variant Delta+PHS L36E/L103K at cryogenic temperature
Deposited 2011-09-07
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:L36E/G50F/V51N/L103K/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;22% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.80 Å
R-free 0.217
|
|
3TP7
Crystal structure of Staphylococcal nuclease variant Delta+PHS V99E at cryogenic temperature
Deposited 2011-09-07
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F/V51N/V99E/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;22% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.90 Å
R-free 0.246
|
|
3TP8
Crystal structure of Staphylococcal nuclease variant Delta+PHS L36E at cryogenic temperature
Deposited 2011-09-07
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:L36E/G50F/V51N/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 9, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.60 Å
R-free 0.212
|
|
3U9O
Crystal structure of Staphylococcal nuclease variant NVIAGA/N100G at cryogenic temperature
Deposited 2011-10-19
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:D21N/T33V/T41I/S59A/N100G/P117G/S128A
|
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;40% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.95 Å
R-free 0.239
|
|
3V2T
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92A/V66A at cryogenic temperature
Deposited 2011-12-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F,V51N,V66A,I92A,P117G,H124L,S128A,del(44-49)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.80 Å
R-free 0.220
|
|
3VA5
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92A/V23A at cryogenic temperature
Deposited 2011-12-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:unp residues 83-231
|
Mutation:V102A, G50F,V51N,I92A,L103A,P117G,H124L,S128A, del(44-49)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;20% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.55 Å
R-free 0.218
|
|
4DF7
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23L/V99I at cryogenic temperature
Deposited 2012-01-23
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:V23L,G50F,V51N,V99I,P117G,H124L,S128A,del(44-49)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;21% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.50 Å
R-free 0.224
|
|
4DFA
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92A/L36A at cryogenic temperature
Deposited 2012-01-23
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:L36A,G50F,V51N,I92A,P117G,H124L,S128A,del(44-49)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 7.0, vapor diffusion, hanging drop, temperature 277K
|
Resolution 1.40 Å
R-free 0.188
|
|
4DGZ
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92A/L125A at cryogenic temperature
Deposited 2012-01-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F,V51N,I92A,P117G,H124L,L125A,S128A,del(44-49)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.47 Å
R-free 0.213
|
|
4DU9
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92A/V74A at cryogenic temperature
Deposited 2012-02-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F,V51N,I92A,P117G,H124L,S128A,del(44-49)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.63 Å
R-free 0.208
|
|
4E6I
Crystal structure of Staphylococcal nuclease variant NVIAGA V99G at cryogenic temperature
Deposited 2012-03-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:D21N/T33V/T41I/S59A/V99G/P117G/S128A
|
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;35% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.00 Å
R-free 0.268
|
|
4E6I
Crystal structure of Staphylococcal nuclease variant NVIAGA V99G at cryogenic temperature
Deposited 2012-03-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:D21N/T33V/T41I/S59A/V99G/P117G/S128A
|
MPD (4S)-2-METHYL-2,4-PENTANEDIOL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;35% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.00 Å
R-free 0.268
|
|
4EQN
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23E/I72K at cryogenic temperature
Deposited 2012-04-19
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:V23E/G50F/V51N/I72K/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;25% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.80 Å
R-free 0.214
|
|
4EQO
Crystal structure of Staphylococcal nuclease variant Delta+PHS V99D at cryogenic temperature
Deposited 2012-04-19
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F/V51N/V99D/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.70 Å
R-free 0.234
|
|
4EQP
Crystal structure of Staphylococcal nuclease variant Delta+PHS I72D at cryogenic temperature
Deposited 2012-04-19
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F/V51N/I72D/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.35 Å
R-free 0.188
|
|
4EVO
Crystal structure of Staphylococcal nuclease variant NVIAGA/E122G at cryogenic temperature
Deposited 2012-04-26
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:D21N/T33V/T41I/S59A/P117G/E122G/S128A
|
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;44% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.95 Å
R-free 0.227
|
|
4F7X
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92A/L25A at cryogenic temperature
Deposited 2012-05-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:L25A,G50F,V51N,I92A,P117G,H124L,S128A,del(44-49)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.70 Å
R-free 0.197
|
|
4F8M
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23I/I92V at cryogenic temperature
Deposited 2012-05-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:V23I,G50F,V51N,I92V,P117G,H124L,S128A,del(44-49)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.60 Å
R-free 0.198
|
|
4G57
Staphylococcal Nuclease double mutant I72L, I92L
Deposited 2012-07-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
89–223(135 aa)
|
Mutation:I72L, I92L
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8.4;277 K;57% MPD, 200 mM Tris.HCl buffer, approx. 6 mg/ml protein, pH 8.4, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.81 Å
R-free 0.232
|
|
4H7B
Crystal Structure of Staphylococcal nuclease mutant I72V/V99L
Deposited 2012-09-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP Residues 83-231
|
Mutation:I72V, V99L
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;25mM Sodium Phosphate buffer, 35-60% MPD, Vapor Diffusion, Hanging Drop, Temperature 277K, pH 7.0, VAPOR DIFFUSION, HANGING DROP
|
Resolution 1.60 Å
R-free 0.248
|
|
4HMI
Crystal structure of Staphylococcal nuclease variant Delta+PHS V99K at cryogenic temperature
Deposited 2012-10-18
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F/V51N/V99K/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;20% MPD, 25 mM potassium phosphate, with calcium chloride and pdTp added to protein in a 3:2:1 ratio, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.75 Å
R-free 0.221
|
|
4HMJ
Crystal structure of Staphylococcal nuclease variant Delta+PHS L36D at cryogenic temperature
Deposited 2012-10-18
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:L36D/G50F/V51N/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;20% MPD, 25 mM potassium phosphate, with calcium chloride and pdTp added to protein in a 3:2:1 ratio, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.35 Å
R-free 0.200
|
|
4HTH
Crystal structure of Staphylococcal nuclease variant Delta+VIAGLA at cryogenic temperature
Deposited 2012-11-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:T33V/T41I/G50V/V51N/S59A/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;42% MPD, 25 mM potassium phosphate, with protein:pdTp:calcium chloride in 1:2:3 molar equivalent ratio, pH 6, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.75 Å
R-free 0.209
|
|
4I65
Crystal Structure of Staphylococcal nuclease mutant V23I/L25V/I72V/I92V
Deposited 2012-11-29
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
88–223(136 aa)
Fragment:UNP Residues 83-223
|
Mutation:V23I, L25V, I72V, I92V
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;25mM Sodium Phosphate buffer, 35-60% MPD, Vapor Diffusion, Hanging Drop, Temperature 277K, pH 7.0, VAPOR DIFFUSION, HANGING DROP
|
Resolution 1.61 Å
R-free 0.239
|
|
4IAL
Crystal structure of Staphylococcal nuclease variant Delta+PHS H121E at cryogenic temperature
Deposited 2012-12-06
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F/V51N/P117G/H121E/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;24% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.59 Å
R-free 0.239
|
|
4ID6
Crystal Structure of Staphylococcal nuclease mutant V23I/I72L
Deposited 2012-12-11
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23I, I72L
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.90 Å
R-free 0.241
|
|
4IUN
Crystal structure of Staphylococcal nuclease variant Delta+PHS R126E at cryogenic temperature
Deposited 2013-01-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F/V51N/P117G/H124L/R126E/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
PO4 PHOSPHATE ION × 1
MPD (4S)-2-METHYL-2,4-PENTANEDIOL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;40% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.60 Å
R-free 0.179
|
|
4IZ8
Crystal structure of Staphylococcal nuclease variant Delta+PHS H8E at cryogenic temperature
Deposited 2013-01-29
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:H8E/G50F/V51N/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;23% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 6, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.70 Å
R-free 0.213
|
|
4J1M
Crystal structure of Staphylococcal nuclease variant Delta+PHS R105E at cryogenic temperature
Deposited 2013-02-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F/V51N/R105E/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;27% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.65 Å
R-free 0.214
|
|
4J6H
Crystal structure of Staphylococcal nuclease variant Delta+PHS H121Q at cryogenic temperature
Deposited 2013-02-11
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F/V51N/P117G/H121Q/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 6, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.60 Å
R-free 0.205
|
|
4K14
Crystal Structure of Staphylococcal nuclease mutant V66I/V99L
Deposited 2013-04-04
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
88–223(136 aa)
Fragment:UNP Residues 83-231
|
Mutation:V66I V99L
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;277 K;50mM phosphate buffer,pH 7.5 45% MPD, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.60 Å
R-free 0.252
|
|
4K2K
Crystal structure of Staphylococcal nuclease variant Delta+PHS L25A/L36A/I92A at cryogenic temperature
Deposited 2013-04-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:L25A,L36A,G50F,V51N,I92A,P117G,H124L,S128A,del(44-49)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.65 Å
R-free 0.217
|
|
4K2L
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92Q at cryogenic temperature
Deposited 2013-04-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50P,V51N,I92Q,P117G,H124L,S128A,del(44-49)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;22% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.55 Å
R-free 0.214
|
|
4K5V
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23T/L36A/V99T at cryogenic temperature
Deposited 2013-04-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:V23T,L36A,G50F,V51N,V99T,P117G,H124L,S128A,del(44-49)
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.75 Å
R-free 0.221
|
|
4K5W
Crystal structure of Staphylococcal nuclease variant V23M/L25F/T62F at cryogenic temperature
Deposited 2013-04-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:V23M,L25F,T62F
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
PO4 PHOSPHATE ION × 1
MRD (4R)-2-METHYLPENTANE-2,4-DIOL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;32% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.65 Å
R-free 0.202
|
|
4K5X
Crystal structure of Staphylococcal nuclease variant V23M/L36F at cryogenic temperature
Deposited 2013-04-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:V23M,L36F
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
MRD (4R)-2-METHYLPENTANE-2,4-DIOL × 2
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;30% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.65 Å
R-free 0.214
|
|
4K6D
Crystal structure of Staphylococcal nuclease variant V23M/T62F at cryogenic temperature
Deposited 2013-04-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:V23M,T62F
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
MPD (4S)-2-METHYL-2,4-PENTANEDIOL × 2
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;34% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.65 Å
R-free 0.213
|
|
4K8I
Crystal Structure of Staphylococcal Nuclease mutant I92V/V99L
Deposited 2013-04-18
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
89–223(135 aa)
Fragment:UNP Residues 89-223
|
Mutation:I174V/V191L
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;25mM Sodium Phosphate, MPD 35-60%, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.10 Å
R-free 0.247
|
|
4K8J
Crystal Structure of Staphylococcal nuclease mutant V23L/V66I
Deposited 2013-04-18
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
89–223(135 aa)
|
Mutation:V105L/V148I
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;25mM Sodium Phosphate, 35-60% MPD, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.00 Å
R-free 0.251
|
|
4KD3
Crystal structure of Staphylococcal nuclease variant Delta+PHS L25A/V66A/I92A at cryogenic temperature
Deposited 2013-04-24
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:L25A,G50F,V51N,V66A,I92A,P117G,H124L,S128A,del(44-49)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 6.0, vapor diffusion, hanging drop, temperature 277K, VAPOR DIFFUSION, HANGING DROP
|
Resolution 1.75 Å
R-free 0.219
|
|
4KD4
Crystal structure of Staphylococcal nuclease variant V23L/L25V/V66I/I72V at cryogenic temperature
Deposited 2013-04-24
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:V23L,L25V,V66I,I72V
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
MRD (4R)-2-METHYLPENTANE-2,4-DIOL × 1
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;30% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8.0, vapor diffusion, hanging drop, temperature 277K
|
Resolution 1.55 Å
R-free 0.219
|
|
4KHV
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23S at cryogenic temperature
Deposited 2013-05-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:V23S/G50F/V51N/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;26% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 9, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.60 Å
R-free 0.207
|
|
4KJN
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23T/V66A/V99T at cryogenic temperature
Deposited 2013-05-03
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:V23T,G50F,V51N,V66A,V99T,P117G,H124L,S128A
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.55 Å
R-free 0.228
|
|
4KJO
Crystal structure of Staphylococcal nuclease variant Delta+PHS L36A/V66T/V99T at cryogenic temperature
Deposited 2013-05-03
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:L36A, G50F,V51N,V66T,V99T,P117G,H124L,S128A
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.90 Å
R-free 0.231
|
|
4KTA
Crystal structure of Staphylococcal nuclease variant Delta+PHS R105Q at cryogenic temperatures
Deposited 2013-05-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F/V51N/R105Q/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;29% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 6, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.95 Å
R-free 0.210
|
|
4KV6
Crystal structure of Staphylococcal nuclease variant Delta+PHS R126Q at cryogenic temperature
Deposited 2013-05-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F/V51N/P117G/H124L/Q126R/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;24% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.55 Å
R-free 0.203
|
|
4KY5
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23D at pH 7 and cryogenic temperature
Deposited 2013-05-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:V23D/G50F/V51N/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;28% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.40 Å
R-free 0.187
|
|
4KY6
Crystal structure of Staphylococcal nuclease variant Delta+PHS L25D at pH 6 and cryogenic temperature
Deposited 2013-05-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:L25D/G50F/V51N/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;21% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 6, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.70 Å
R-free 0.227
|
|
4KY7
Crystal structure of Staphylococcal nuclease variant Delta+PHS V74D at cryogenic temperature
Deposited 2013-05-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F/V51N/V74D/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.55 Å
R-free 0.207
|
|
4LAA
Crystal structure of Staphylococcal nuclease variant Delta+PHS L36H at cryogenic temperature
Deposited 2013-06-19
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:L36H/G50F/V51N/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;25% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.58 Å
R-free 0.191
|
|
4ME5
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23S/V66A at cryogenic temperature
Deposited 2013-08-25
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:V23S, G50F,V51N,V66A,P117G,H124L,S128A
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;25% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.80 Å
R-free 0.223
|
|
4MIU
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23T/V99T at cryogenic temperature
Deposited 2013-09-02
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:V23T, G50F,V51N,V99T,P117G,H124L,S128A,del(44-49)
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.67 Å
R-free 0.235
|
|
4N9P
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23T/L25A/V99T at cryogenic temperature
Deposited 2013-10-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:V23T,L25A,G50F,V51N,V99T,P117G,H124L,S128A,del(44-49)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;25% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.40 Å
R-free 0.196
|
|
4N9T
Crystal structure of Staphylococcal nuclease variant Delta+PHS V66A/I92S at cryogenic temperature
Deposited 2013-10-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F,V51N,V66A,I92S,P117G,H124L,S128A,del(44-49)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.60 Å
R-free 0.223
|
|
4NDX
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92N at cryogenic temperature
Deposited 2013-10-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F,V51N,I92N,P117G,H124L,S128A,del(44-49)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.50 Å
R-free 0.216
|
|
4NKL
Crystal structure of Staphylococcal nuclease variant Delta+PHS V66A/I92Q at cryogenic temperature
Deposited 2013-11-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F,V51N,V66A,I92Q,P117G,H124L,S128A,del(44-49)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;25% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.60 Å
R-free 0.219
|
|
4NMZ
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23Q/V66A at cryogenic temperature
Deposited 2013-11-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:V23Q,G50F,V51N,V66A,P117G,H124L,S128A,del(44-49)
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.70 Å
R-free 0.212
|
|
4NP5
Crystal structure of Staphylococcal nuclease variant Delta+PHS V66A/I92N at cryogenic temperature
Deposited 2013-11-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F,V51N,V66A,I92N,P117G,H124L,S128A,del(44-49)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.50 Å
R-free 0.214
|
|
4ODG
Crystal structure of Staphylococcal nuclease variant V23I/V66I/V74I/V99I at cryogenic temperature
Deposited 2014-01-10
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:V23I/V66I/V74I/V99I
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;24% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.73 Å
R-free 0.240
|
|
4OL7
Crystal structure of Staphylococcal nuclease variant Delta+PHS V66E A109E at cryogenic temperature
Deposited 2014-01-23
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F/V51N/V66E/A109E/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;30% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 6, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.67 Å
R-free 0.191
|
|
4OL7
Crystal structure of Staphylococcal nuclease variant Delta+PHS V66E A109E at cryogenic temperature
Deposited 2014-01-23
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F/V51N/V66E/A109E/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;30% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 6, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.67 Å
R-free 0.191
|
|
4PMB
Crystal structure of Staphylcoccal nuclease variant Delta+PHS I92S at cryogenic temperature
Deposited 2014-05-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:Delta 44-49, G50F, V51N, I92S, P117G, H124L, S128A
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;25% MPD, 25mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.80 Å
R-free 0.227
|
|
4PMC
Crystal structure of Staphylcoccal nuclease variant Delta+PHS I72K V74K at cryogenic temperature
Deposited 2014-05-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:Delta 44-49, G50F, V51N, I72K, V74K, P117G, H124L, S128A
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;25% MPD, 25mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.65 Å
R-free 0.210
|
|
4PNY
Crystal structure of Staphylococcal nuclease variant Delta+PHS I72H at cryogenic temperature
Deposited 2014-02-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:G50F/V51N/I72H/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.68 Å
R-free 0.242
|
|
4QB4
Crystal Structure of Staphylococcal Nuclease mutant V23L/L25V/V66L
Deposited 2014-05-06
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
88–223(136 aa)
Fragment:UNP Residues 88-223
|
Mutation:V23L, L25V, V66L
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;0.6 M Ammonium sulfate, MPD 50-60%, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K, temperature 277.0K
|
Resolution 1.60 Å
R-free 0.236
|
|
4QF4
Crystal structure of Staphylococcal nuclease variant V23M at cryogenic temperature
Deposited 2014-05-19
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
83–231(149 aa)
Chain B
83–231(149 aa)
|
Mutation:V23M
Mutation:V23M
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 2
CA CALCIUM ION × 2
PO4 PHOSPHATE ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;32% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 6.0, vapor diffusion, hanging drop, temperature 277K
|
Resolution 1.80 Å
R-free 0.239
|
|
4QF4
Crystal structure of Staphylococcal nuclease variant V23M at cryogenic temperature
Deposited 2014-05-19
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
83–231(149 aa)
|
Mutation:V23M
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;32% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 6.0, vapor diffusion, hanging drop, temperature 277K
|
Resolution 1.80 Å
R-free 0.239
|
|
4QF4
Crystal structure of Staphylococcal nuclease variant V23M at cryogenic temperature
Deposited 2014-05-19
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23M
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;32% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 6.0, vapor diffusion, hanging drop, temperature 277K
|
Resolution 1.80 Å
R-free 0.239
|
|
4R8N
Crystal structure of Staphylococcal nuclease variant V23I/V66I/I72V/I92V at cryogenic temperature
Deposited 2014-09-02
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–223(141 aa)
Fragment:UNP residues 83-223
|
Not recorded
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
PO4 PHOSPHATE ION × 1
MRD (4R)-2-METHYLPENTANE-2,4-DIOL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;20% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 9, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.65 Å
R-free 0.239
|
|
4RKB
Crystal structure of Staphylococcal nuclease variant Delta+PHS V66T/V99T at cryogenic temperature
Deposited 2014-10-12
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-232
|
Not recorded
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;30% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp , pH 9, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.88 Å
R-free 0.225
|
|
4RKL
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23T/V66T at cryogenic temperature
Deposited 2014-10-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-232
|
Mutation:V23T, V60T
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;20% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 8.0, vapor diffusion, hanging drop, temperature 277K
|
Resolution 1.66 Å
R-free 0.232
|
|
4S3S
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92K/V23A at cryogenic temperature
Deposited 2015-06-19
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:Nuclease A (UNP residues 83-231)
|
Mutation:V23A/G50F/I92K/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;25% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.64 Å
R-free 0.216
|
|
4TRD
Crystal structure of Staphylcoccal nuclease variant Delta+PHS I72K/V74K at pH 9.0 at cryogenic temperature
Deposited 2014-06-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:fragment 83-231
|
Mutation:Delta 44-49, G50F, V51N, I72K, V74K, P117G, H124L, S128A
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;20% MPD, 25mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.60 Å
R-free 0.195
|
|
4WOR
Staphylococcal nuclease in complex with Ca2+ and thymidine-3'-5'-diphosphate (pdTp) at room temperature
Deposited 2014-10-16
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Not recorded
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8.15;277 K;2-methyl-2,4-pentanediol (MPD), potassium phosphate, thymidine-3',5'-diphosphate (pdTp), Ca2+
|
Resolution 1.60 Å
R-free 0.204
|
|
4YIJ
Crystal structure of Staphylcoccal nuclease variant Delta+PHS A109E at cryogenic temperature
Deposited 2015-03-02
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:G50F/V51N/A109E/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;25% MPD, 25mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.64 Å
R-free 0.190
|
|
4YIJ
Crystal structure of Staphylcoccal nuclease variant Delta+PHS A109E at cryogenic temperature
Deposited 2015-03-02
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
83–231(149 aa)
|
Mutation:G50F/V51N/A109E/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;25% MPD, 25mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.64 Å
R-free 0.190
|
|
4ZQ3
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92T at cryogenic temperature
Deposited 2015-05-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:G50F/V51N/I92T/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;35% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.90 Å
R-free 0.254
|
|
4ZUI
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23H at cryogenic temperature
Deposited 2015-05-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23H/G50F/V51N/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;30% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.70 Å
R-free 0.250
|
|
4ZUJ
Crystal structure of Staphylococcal nuclease variant Delta+PHS Y91H at cryogenic temperature
Deposited 2015-05-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:G50F/V51N/Y91H/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;21% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.72 Å
R-free 0.207
|
|
5C3W
Crystal structure of Staphylococcal nuclease variant Delta+PHS V66H at cryogenic temperature
Deposited 2015-06-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/V66H/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.72 Å
R-free 0.207
|
|
5C3X
Crystal structure of Staphylococcal nuclease variant Delta+PHS I72D/N100E at cryogenic temperature
Deposited 2015-06-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/I72D/N100E/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;30% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.95 Å
R-free 0.208
|
|
5C4H
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92H at cryogenic temperature
Deposited 2015-06-18
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/I92H/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;30% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.80 Å
R-free 0.196
|
|
5C4Z
Crystal structure of Staphylococcal nuclease variant Delta+PHS L25H at cryogenic temperature
Deposited 2015-06-18
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:L25H/G50F/V51N/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;30% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.62 Å
R-free 0.192
|
|
5C5L
Crystal structure of Staphylococcal nuclease variant Delta+PHS T62E / L125E at cryogenic temperature
Deposited 2015-06-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/T62E/P117G/H124L/L125E/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;35% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.75 Å
R-free 0.191
|
|
5C5M
Crystal structure of Staphylococcal nuclease variant Delta+PHS T62D / V104E at cryogenic temperature
Deposited 2015-06-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/T62D/V104E/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;25% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.70 Å
R-free 0.213
|
|
5C6A
Crystal structure of Staphylococcal nuclease variant Delta+PHS L25E / N100E at cryogenic temperature
Deposited 2015-06-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:L25E/G50F/V51N/N100E/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.85 Å
R-free 0.203
|
|
5CC4
Crystal structure of Staphylococcal nuclease variant Delta+PHS T62E/V66E at cryogenic temperature
Deposited 2015-07-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/T62E/V66E/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;25% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.90 Å
R-free 0.227
|
|
5CGK
Crystal structure of Staphylococcal nuclease variant Delta+PHS V66D/N100E at cryogenic temperature
Deposited 2015-07-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/V66D/N100E/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.85 Å
R-free 0.239
|
|
5CR3
Crystal structure of Staphylococcal nuclease variant Delta+PHS V104E/L125E at cryogenic temperature
Deposited 2015-07-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:K16A,G50P,V51N,V104E,P117G,H124L,L125E,S128A,del(44-49)
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;22% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.80 Å
R-free 0.232
|
|
5CV4
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23D/V66H at cryogenic temperature
Deposited 2015-07-25
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23D/G50F/V51N/V66H/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.80 Å
R-free 0.232
|
|
5CV5
Crystal structure of Staphylococcal nuclease variant Delta+PHS K64G/V66K/E67G at cryogenic temperature
Deposited 2015-07-25
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:G50F/V51N/K64G/V66K/E67G/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;25% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.80 Å
R-free 0.225
|
|
5CV5
Crystal structure of Staphylococcal nuclease variant Delta+PHS K64G/V66K/E67G at cryogenic temperature
Deposited 2015-07-25
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
83–231(149 aa)
|
Mutation:G50F/V51N/K64G/V66K/E67G/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;25% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.80 Å
R-free 0.225
|
|
5CV6
Crystal structure of Staphylococcal nuclease variant Delta+PHS V66H/I92E at cryogenic temperature
Deposited 2015-07-25
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:G50F/V51N/V66H/I92E/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.95 Å
R-free 0.232
|
|
5CV7
Crystal structure of Staphylococcal nuclease variant Delta+PHS V66H/I92D at cryogenic temperature
Deposited 2015-07-25
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:G50F/V51N/V66H/I92D/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.65 Å
R-free 0.205
|
|
5CV8
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23D/T62H at cryogenic temperature
Deposited 2015-07-25
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23D/G50F/V51N/T62H/P117G/H124L/S128A/del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;21% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.58 Å
R-free 0.198
|
|
5CV9
Crystal structure of Staphylococcal nuclease variant Delta+PHS L36E/V66H at cryogenic temperature
Deposited 2015-07-25
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:L36E/G50F/V51N/V66H/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;25% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.62 Å
R-free 0.220
|
|
5DAU
Crystal structure of Staphylococcal nuclease variant Delta+PHS V39E/V104E at cryogenic temperature
Deposited 2015-08-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 803-231
|
Mutation:V39E/G50F/V51N/V104E/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;22% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.50 Å
R-free 0.190
|
|
5DEH
Crystal structure of Staphylococcal nuclease variant Delta+PHS N100D at cryogenic temperature
Deposited 2015-08-25
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/N100D/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.70 Å
R-free 0.200
|
|
5E1F
Crystal structure of Staphylococcal nuclease variant Delta+PHS G20E at cryogenic temperature
Deposited 2015-09-29
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/I92K/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;35% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.90 Å
R-free 0.228
|
|
5E3F
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92K at cryogenic temperature
Deposited 2015-10-02
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:G50F/V51N/I92K/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;26% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.75 Å
R-free 0.224
|
|
5EGT
Crystal structure of Staphylococcal nuclease variant Delta+PHS V66E at cryogenic temperature
Deposited 2015-10-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/V66E/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;20% MPD, 25mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.85 Å
R-free 0.218
|
|
5EKK
Crystal structure of Staphylococcal nuclease variant Delta+PHS V39D/L125E at cryogenic temperature
Deposited 2015-11-03
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V39D/V51N/P117G/H124L/L125E/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;30% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 2.10 Å
R-free 0.238
|
|
5EKL
Crystal structure of Staphylococcal nuclease variant Delta+PHS T62D/N100E at cryogenic temperature
Deposited 2015-11-03
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/T62D/N100E/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;21% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 2.10 Å
R-free 0.244
|
|
5F2D
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92N/V99T at cryogenic temperature
Deposited 2015-12-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/I92N/V99T/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.70 Å
R-free 0.222
|
|
5HGT
Crystal structure of Staphylococcal nuclease variant Delta+PHS L25K/I92T at cryogenic temperature
Deposited 2016-01-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:L25K/G50F/V51N/I92T/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;30% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.75 Å
R-free 0.212
|
|
5HUR
Crystal structure of Staphylococcal nuclease variant Delta+PHS L25T/I92K at cryogenic temperature
Deposited 2016-01-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:L25T/G50F/V51N/I92K/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.50 Å
R-free 0.231
|
|
5I6W
Crystal structure of Staphylococcal nuclease variant Delta+PHS A58D at cryogenic temperature
Deposited 2016-02-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 80-228
|
Mutation:G50F/V51N/A58D/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;18% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.90 Å
R-free 0.235
|
|
5I6Y
Crystal structure of Staphylococcal nuclease variant Delta+PHS A90E at cryogenic temperature
Deposited 2016-02-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 80-228
|
Mutation:G50F/V51N/A90E/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;25% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.90 Å
R-free 0.222
|
|
5I9O
Crystal structure of Staphylococcal nuclease variant Delta+PHS L36K L103K at cryogenic temperature
Deposited 2016-02-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:L36K/G50F/V51N/L103K/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.95 Å
R-free 0.238
|
|
5I9O
Crystal structure of Staphylococcal nuclease variant Delta+PHS L36K L103K at cryogenic temperature
Deposited 2016-02-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:L36K/G50F/V51N/L103K/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.95 Å
R-free 0.238
|
|
5I9P
Crystal structure of Staphylococcal nuclease variant Delta+PHS T62H at cryogenic temperature
Deposited 2016-02-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/T62H/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;19% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.85 Å
R-free 0.228
|
|
5IGB
Crystal structure of Staphylococcal nuclease variant Delta+PHS L36D/V66H at cryogenic temperature
Deposited 2016-02-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:L36D/G50F/V51N/V66H/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.80 Å
R-free 0.226
|
|
5IGC
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23E/V66H at cryogenic temperature
Deposited 2016-02-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:V23E/G50F/V51N/V66H/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.80 Å
R-free 0.225
|
|
5IGD
Crystal structure of Staphylococcal nuclease variant Delta+PHS T62H/I92E at cryogenic temperature
Deposited 2016-02-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/T62H/I92E/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.80 Å
R-free 0.234
|
|
5IGE
Crystal structure of Staphylococcal nuclease variant Delta+PHS T62H/V99D at cryogenic temperature
Deposited 2016-02-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/T62H/V99D/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;28% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.80 Å
R-free 0.211
|
|
5IGF
Crystal structure of Staphylococcal nuclease variant Delta+PHS T62H/V66D at cryogenic temperature
Deposited 2016-02-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/T62H/V66D/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.70 Å
R-free 0.221
|
|
5IGG
Crystal structure of Staphylococcal nuclease variant Delta+PHS V66H/I72E at cryogenic temperature
Deposited 2016-02-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/V66H/I72E/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.70 Å
R-free 0.237
|
|
5IIF
Crystal structure of Staphylococcal nuclease variant Delta+PHS T62D at cryogenic temperature
Deposited 2016-03-01
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/T62D/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.85 Å
R-free 0.238
|
|
5IOC
Crystal structure of Staphylococcal nuclease variant Delta+PHS V66H/V99D at cryogenic temperature
Deposited 2016-03-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/V66H/V99D/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;24% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.90 Å
R-free 0.235
|
|
5IOD
Crystal structure of Staphylococcal nuclease variant Delta+PHS V66H/V99E at cryogenic temperature
Deposited 2016-03-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/V66H/V99E/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;21% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.60 Å
R-free 0.231
|
|
5ISR
Crystal structure of Staphylococcal nuclease variant Delta+PHS L38E at cryogenic temperature
Deposited 2016-03-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:L38E/G50F/V51N/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.90 Å
R-free 0.236
|
|
5J1Z
Crystal structure of Staphylococcal nuclease variant Delta+PHS A90D at cryogenic temperature
Deposited 2016-03-29
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/A90D/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.73 Å
R-free 0.209
|
|
5J22
Crystal structure of Staphylococcal nuclease variant Delta+PHS L103D at cryogenic temperature
Deposited 2016-03-29
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/L103D/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;22% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.90 Å
R-free 0.235
|
|
5JAV
Crystal structure of Staphylococcal nuclease variant Delta+PHS Y91D at cryogenic temperature
Deposited 2016-04-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/Y91D/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;26% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.90 Å
R-free 0.245
|
|
5JOB
Crystal structure of Staphylococcal nuclease variant Delta+PHS L25K/I92A at cryogenic temperature
Deposited 2016-05-02
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:L25K/G50F/V51N/I92A/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;30% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.45 Å
R-free 0.182
|
|
5K5P
Crystal structure of Staphylococcal nuclease variant Delta+PHS I72K L103K at cryogenic temperature
Deposited 2016-05-23
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/I72K/L103K/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.83 Å
R-free 0.237
|
|
5KEE
Crystal structure of Staphylococcal nuclease variant Delta+PHS L25K/I92F at cryogenic temperature
Deposited 2016-06-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:L25K/G50F/V51N/I92F/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;30% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.50 Å
R-free 0.203
|
|
5KGU
Crystal structure of Staphylococcal nuclease variant Delta+PHS N118D at cryogenic temperature
Deposited 2016-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/P117G/N118D/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;25% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.90 Å
R-free 0.233
|
|
5KIX
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92E at cryogenic temperature
Deposited 2016-06-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/I92E/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.75 Å
R-free 0.223
|
|
5KRU
Crystal structure of Staphylococcal nuclease variant Delta+PHS T62E/V66K at cryogenic temperature
Deposited 2016-07-07
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/T62E/V66K/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;28% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.60 Å
R-free 0.221
|
|
5KYI
Crystal structure of Staphylococcal nuclease variant Delta+PHS T62K/V66E pH 9 at cryogenic temperature
Deposited 2016-07-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/T62K/V66E/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;40% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.70 Å
R-free 0.203
|
|
5KYL
Crystal structure of Staphylococcal nuclease variant Delta+PHS T62K/V66E pH 7 at cryogenic temperature
Deposited 2016-07-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/T62K/V66E/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;30% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.85 Å
R-free 0.220
|
|
5NUC
STAPHYLOCOCCAL NUCLEASE, 1-N-PENTANE THIOL DISULFIDE TO V23C VARIANT
Deposited 1998-01-11
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23C, 1-N-PENTANE THIOL DISULFIDE
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 8.15;277 K;10 MM POTASSIUM PHOSPHATE, PH 8.15 PROTEIN CONCENTRATION = 2 MGS/ML MPD =21% T=4 DEGREES C, temperature 277K
|
Resolution 2.10 Å
|
|
6AMF
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23K/L36E at cryogenic temperature
Deposited 2017-08-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23K/L36E/G50F/V51N/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;24% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.85 Å
R-free 0.261
|
|
6B8R
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23K/L36Q at cryogenic temperature
Deposited 2017-10-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
|
Mutation:V23K/L36Q/G50F/V51N/P117G/H124L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.65 Å
R-free 0.216
|
|
6EEG
Crystal structure of Staphylcoccal nuclease variant Delta+PHS T62E at cryogenic temperature
Deposited 2018-08-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/T62E/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;22% MPD, 25 mM potassium phosphate, calcium chloride, pdTp
|
Resolution 1.95 Å
R-free 0.219
|
|
6EEK
Crystal structure of apo Staphylcoccal nuclease variant Delta+PHS T62E/V66K, pH 7 at cryogenic temperature
Deposited 2018-08-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/T62E/V66K/P117G/H124L/S128A/Del44-49
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;100 mM HEPES, 29% Jeffamine ED-2001
|
Resolution 2.20 Å
R-free 0.309
|
|
6OK8
Crystal structure of Staphylococcal nuclease variant Delta+PHS K127L at cryogenic temperature
Deposited 2019-04-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/P117G/H124L/K127L/S128A/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;46% MPD, 25 mM potassium phosphate, calcium chloride, THP
|
Resolution 1.80 Å
R-free 0.225
|
|
6U0W
Crystal structure of Staphylococcal nuclease variant Delta+PHS K133M at cryogenic temperature
Deposited 2019-08-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F,V51N,P117G,H124L,S128A,K133M,Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;22% MPD, 25 mM potassium phosphate, calcium chloride, THP
|
Resolution 1.90 Å
R-free 0.273
|
|
6U0X
Crystal structure of Staphylococcal nuclease variant Delta+PHS Q123D at cryogenic temperature
Deposited 2019-08-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F,V51N,P117G,Q123D,H124L,S128A,Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, THP
|
Resolution 1.86 Å
R-free 0.272
|
|
6XSB
Crystal structure of Staphylococcal nuclease variant Delta+PHS A132S at cryogenic temperature
Deposited 2020-07-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/P117G/H124L/S128A/A132S/Del44-49
|
CA CALCIUM ION × 1
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;25% MPD, 25 mM potassium phosphate, calcium chloride, THP
|
Resolution 1.95 Å
R-free 0.259
|
|
6XSC
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23T at cryogenic temperature
Deposited 2020-07-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:V23T/G50F/V51N/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride
|
Resolution 2.00 Å
R-free 0.259
|
|
6XSE
Crystal structure of Staphylococcal nuclease variant Delta+PHS F34Y at cryogenic temperature
Deposited 2020-07-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:F34Y/G50F/V51N/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;26% MPD, 25 mM potassium phosphate, calcium chloride, THP
|
Resolution 2.10 Å
R-free 0.279
|
|
6XSF
Crystal structure of Staphylococcal nuclease variant Delta+PHS T41V at cryogenic temperature
Deposited 2020-07-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8;277 K;35% MPD, 25 mM potassium phosphate, calcium chloride, THP
|
Resolution 1.60 Å
R-free 0.227
|
|
6XSG
Crystal structure of Staphylococcal nuclease variant Delta+PHS V66T at cryogenic temperature
Deposited 2020-07-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/V66T/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;32% MPD, 25 mM potassium phosphate, calcium chloride, THP
|
Resolution 2.00 Å
R-free 0.247
|
|
6XSH
Crystal structure of Staphylococcal nuclease variant Delta+PHS T62V at cryogenic temperature
Deposited 2020-07-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/T62V/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, THP
|
Resolution 2.00 Å
R-free 0.276
|
|
6XSI
Crystal structure of Staphylococcal nuclease variant Delta+PHS V104T at cryogenic temperature
Deposited 2020-07-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
83–231(149 aa)
Fragment:UNP residues 83-231
|
Mutation:G50F/V51N/V104T/P117G/H124L/S128A/Del44-49
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;20% MPD, 25 mM potassium phosphate, calcium chloride, THP
|
Resolution 2.00 Å
R-free 0.271
|
|
8K2T
Solution structure of full-length HtpG in complex with D131D
Deposited 2023-07-13
|
Different construct
Different oligomeric state
Different experimental conditions
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain C
95–222(128 aa)
|
Not recorded
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 7;310 K;Ionic strength (raw mmCIF value) 150;Pressure 1
NMR sample composition
500 uM [U-13C; U-15N; U-2H] Heat shock protein 90(HtpG M domain), 500 uM [U-2H, 15N; Ala- 13CH3; Met- 13CH3; Ile-d1- 13CH3; Leu, Val- 13CH3/ 13CH3; Thr- 13CH3] Heat shock protein 90(HtpG M domian), 500 uM [U-13C; U-15N; U-2H] Heat shock protein 90(HtpG N domain), 500 uM [U-100% 13C; U-100% 15N] Disordered protein(D131D), 500 uM [U-2H, 15N; Ala- 13CH3; Met- 13CH3; Ile-d1- 13CH3; Leu, Val- 13CH3/ 13CH3; Thr- 13CH3] Heat shock protein 90(HtpG N domain), 600 uM [U-2H, 15N; Ala- 13CH3; Met- 13CH3; Ile-d1- 13CH3; Leu, Val- 13CH3/ 13CH3; Thr- 13CH3] Heat shock protein 90(HtpG C domain), 500 uM [U-2H, 15N; Ala- 13CH3; Met- 13CH3; Ile-d1- 13CH3; Leu, Val- 13CH3/ 13CH3; Thr- 13CH3] Heat shock protein 90(HtpG-D131D), 500 uM [U-2H, 15N; Ala- 13CH3; Met- 13CH3; Ile-d1- 13CH3; Leu, Val- 13CH3/ 13CH3; Thr- 13CH3] Heat shock protein 90(HtpG M-D131D N), 500 uM [U-2H, 15N; Ala- 13CH3; Met- 13CH3; Ile-d1- 13CH3; Leu, Val- 13CH3/ 13CH3; Thr- 13CH3] Heat shock protein 90(HtpG M-D131D C), 93% H2O/7% D2O | 93% H2O/7% D2O
|
Resolution not provided
|
|
9C11
Crystal structure of Staphylococcal nuclease variant Delta+PHS L36R at cryogenic temperature
Deposited 2024-05-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
83–231(149 aa)
Chain B
83–231(149 aa)
|
Not recorded
|
THP THYMIDINE-3',5'-DIPHOSPHATE × 2
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;277 K;28% MPD
25mM K Phosphate
|
Resolution 1.95 Å
R-free 0.261
|