9nx0

Alpha7-nicotinic acetylcholine receptor bound to conotoxin ImI

Method: ELECTRON MICROSCOPY Dmax: 152.2 Å Quality: GOOD

1. Protein Identity and Related Structures Protein Identity & Related Structures

Alpha-conotoxin ImI

OrganismNot specified

UniProt P50983

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Other combination Heteromer Protein × 10 其他Polymer 10 PDB declaration: decameric(10) Consistent with protein copy count Chain F; UniProt 5–16 Chain G; UniProt 5–16 Chain H; UniProt 5–16 Chain I; UniProt 5–16 Chain J; UniProt 5–16 Fragment:residues 5-16 Non-standard monomer:Yes (specific site not provided by mmCIF) Neuronal acetylcholine receptor subunit alpha-7 × 5 (P36544) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 10 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 5 POV (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate × 5 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4 cryo-EM vitrification conditions:Cryogen ETHANE Resolution 3.06 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

12 other PDB entries and 12 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name CA1_CONIM
Isoform
PDB entities 1
Chains and sequence ranges Author chain F; PDBConstruct 1–12; UniProt 5–16 Author chain G; PDBConstruct 1–12; UniProt 5–16 Author chain H; PDBConstruct 1–12; UniProt 5–16 Author chain I; PDBConstruct 1–12; UniProt 5–16 Author chain J; PDBConstruct 1–12; UniProt 5–16

Neuronal acetylcholine receptor subunit alpha-7

Homo sapiens

UniProt P36544

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Other combination Heteromer Protein × 10 其他Polymer 10 PDB declaration: decameric(10) Consistent with protein copy count Chain A; UniProt 24–501 Chain B; UniProt 24–501 Chain C; UniProt 24–501 Chain D; UniProt 24–501 Chain E; UniProt 24–501 Not recorded Alpha-conotoxin ImI × 5 (P50983) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 10 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 5 POV (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate × 5 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4 cryo-EM vitrification conditions:Cryogen ETHANE Resolution 3.06 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

44 other PDB entries and 44 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name ACHA7_HUMAN
Isoform
PDB entities 2
Chains and sequence ranges Author chain A; PDBConstruct 1–478; UniProt 24–501 Author chain B; PDBConstruct 1–478; UniProt 24–501 Author chain C; PDBConstruct 1–478; UniProt 24–501 Author chain D; PDBConstruct 1–478; UniProt 24–501 Author chain E; PDBConstruct 1–478; UniProt 24–501

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 9nx0

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 9nx0
Download Download

2. Structure Basics 2. Structure Basics

Entry ID entry_id9nx0
Deposition date deposition_date2025-03-25
Structure title titleAlpha7-nicotinic acetylcholine receptor bound to conotoxin ImI
Keywords keywordsion channel, toxin, MEMBRANE PROTEIN; MEMBRANE PROTEIN
Experimental Method methodELECTRON MICROSCOPY

3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier44.77
Radius of gyration Rg (electron density) rg_electron44.39
Forward intensity I(0) i0762091000.00
Molecular weight molecular_weight238860.0 kDa
Excluded volume excluded_volume303180 ų
Envelope volume envelope_volume409480 ų
Hydration-shell volume shell_volume77319 ų
Envelope diameter envelope_diameter162.1
Shell Rg shell_rg48.54
Envelope Rg envelope_rg44.76
Shape Rg shape_rg44.40
Total Rg total_rg44.55
Total atoms total_atoms32815
Residues n_residues2020
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 −1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3

4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax152.2
Rg (real space) rg_real45.03
Rg uncertainty (real space) rg_real_error1.93
I(0) (real space) i0_real7.6210e+08
I(0) uncertainty (real space) i0_real_error1.4010e+07
Rg (reciprocal space) rg_reciprocal44.78
I(0) (reciprocal space) i0_reciprocal761900000.0000
Solution quality estimate total_estimate0.8279
Solution quality rating solution_quality GOOD a GOOD solution
P(r) peaks n_peaks2
Primary peak position r_peak_primary47.8
Skewness Skewness skewness0.575
Kurtosis Kurtosis kurtosis-0.059
Angular range angular_range— – 0.1750 −1
Current regularization parameter α current_alpha0.0000
Highest regularization parameter α highest_alpha115000000.0000
Real-space data points n_real_points36
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 0.703; Stabil: 0.998; Sysdev: 1.000; Positv: 1.000; Valcen: 0.979; Smooth: 0.678

5. Crystallography and Experiment 5. Crystallography & Experiment

6. Entities and Polymers Entities & Polymers (5)

8. Citations (1)

9. Files and Curves (10)