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9pra

In Situ Structure of the Human Mitoribosome Large Subunit 39S in Complex with EF-Tu

Method: ELECTRON MICROSCOPY Dmax: 201.0 Å Quality: EXCELLENT

SAXS Profile

SAXS profile for 9pra

P(r) Distribution

P(r) distribution for 9pra

1. Structure Basics

entry_id9pra
deposition_date2025-07-23
titleIn Situ Structure of the Human Mitoribosome Large Subunit 39S in Complex with EF-Tu
keywordsmitochondria, mitoribosome, inner membrane, RIBOSOME; RIBOSOME
methodELECTRON MICROSCOPY

Download Data

2. SAXS Parameters (CRYSOL)

rg_guinier78.15
rg_electron82.31
i058167600000.00
molecular_weight1678800.0 kDa
excluded_volume1944400 ų
envelope_volume3220000 ų
shell_volume303410 ų
envelope_diameter306.6
shell_rg91.29
envelope_rg82.97
shape_rg82.53
total_rg81.78
total_atoms115757
n_residues11587
n_harmonics20
q_range— – 0.5000 −1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3

3. P(r) Analysis (GNOM)

dmax201.0
rg_real75.14
rg_real_error0.43
i0_real5.5970e+10
i0_real_error9.7470e+08
rg_reciprocal78.40
i0_reciprocal58210000000.0000
total_estimate0.9069
solution_quality EXCELLENT a EXCELLENT solution
n_peaks2
r_peak_primary90.4
skewness0.211
kurtosis-0.514
angular_range— – 0.1000 −1
current_alpha0.2089
highest_alpha4162000000.0000
n_real_points21
gnom_version4.1.3
quality_criteria AN1: 0.001; Oscil: 0.966; Stabil: 0.983; Sysdev: 1.000; Positv: 1.000; Valcen: 0.988; Smooth: 0.007

4. Crystallography & Experiment

5. Entities & Polymer Info (67)

6. Citations (1)

7. Files & Curves (10)