5a9q

Human nuclear pore complex

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

NUCLEOPORIN NUP43

OrganismNot specified

UniProt Q8NFH3

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 304 NUCLEAR PORE COMPLEX PROTEIN NUP160 × 32 (Q12769) NUCLEOPORIN NUP37 × 32 (Q8NFH4) NUCLEAR PORE COMPLEX PROTEIN NUP133 × 32 (Q8WUM0) NUCLEAR PORE COMPLEX PROTEIN NUP107 × 32 (P57740) NUCLEAR PORE COMPLEX PROTEIN NUP96 × 32 (P52948) PROTEIN SEC13 HOMOLOG × 32 (P55735) NUCLEOPORIN SEH1 × 32 (Q96EE3) NUCLEAR PORE COMPLEX PROTEIN NUP85 × 32 (Q9BW27) NUCLEAR PORE COMPLEX PROTEIN NUP155 × 16 (O75694) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NUP43_HUMAN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain 0; PDBConstruct 1–380; UniProt 1–380 Author chain 9; PDBConstruct 1–380; UniProt 1–380 Author chain I; PDBConstruct 1–380; UniProt 1–380 Author chain R; PDBConstruct 1–380; UniProt 1–380

NUCLEAR PORE COMPLEX PROTEIN NUP160

OrganismNot specified

UniProt Q12769

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 304 NUCLEOPORIN NUP43 × 32 (Q8NFH3) NUCLEOPORIN NUP37 × 32 (Q8NFH4) NUCLEAR PORE COMPLEX PROTEIN NUP133 × 32 (Q8WUM0) NUCLEAR PORE COMPLEX PROTEIN NUP107 × 32 (P57740) NUCLEAR PORE COMPLEX PROTEIN NUP96 × 32 (P52948) PROTEIN SEC13 HOMOLOG × 32 (P55735) NUCLEOPORIN SEH1 × 32 (Q96EE3) NUCLEAR PORE COMPLEX PROTEIN NUP85 × 32 (Q9BW27) NUCLEAR PORE COMPLEX PROTEIN NUP155 × 16 (O75694) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NU160_HUMAN
Isoform —
PDB entities 2
Chains and sequence ranges Author chain 1; PDBConstruct 1–1436; UniProt 1–1436 Author chain J; PDBConstruct 1–1436; UniProt 1–1436 Author chain S; PDBConstruct 1–1436; UniProt 1–1436 Author chain a; PDBConstruct 1–1436; UniProt 1–1436

NUCLEOPORIN NUP37

OrganismNot specified

UniProt Q8NFH4

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 304 NUCLEOPORIN NUP43 × 32 (Q8NFH3) NUCLEAR PORE COMPLEX PROTEIN NUP160 × 32 (Q12769) NUCLEAR PORE COMPLEX PROTEIN NUP133 × 32 (Q8WUM0) NUCLEAR PORE COMPLEX PROTEIN NUP107 × 32 (P57740) NUCLEAR PORE COMPLEX PROTEIN NUP96 × 32 (P52948) PROTEIN SEC13 HOMOLOG × 32 (P55735) NUCLEOPORIN SEH1 × 32 (Q96EE3) NUCLEAR PORE COMPLEX PROTEIN NUP85 × 32 (Q9BW27) NUCLEAR PORE COMPLEX PROTEIN NUP155 × 16 (O75694) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NUP37_HUMAN
Isoform —
PDB entities 3
Chains and sequence ranges Author chain 2; PDBConstruct 1–326; UniProt 1–326 Author chain K; PDBConstruct 1–326; UniProt 1–326 Author chain T; PDBConstruct 1–326; UniProt 1–326 Author chain b; PDBConstruct 1–326; UniProt 1–326

NUCLEAR PORE COMPLEX PROTEIN NUP133

OrganismNot specified

UniProt Q8WUM0

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 304 NUCLEOPORIN NUP43 × 32 (Q8NFH3) NUCLEAR PORE COMPLEX PROTEIN NUP160 × 32 (Q12769) NUCLEOPORIN NUP37 × 32 (Q8NFH4) NUCLEAR PORE COMPLEX PROTEIN NUP107 × 32 (P57740) NUCLEAR PORE COMPLEX PROTEIN NUP96 × 32 (P52948) PROTEIN SEC13 HOMOLOG × 32 (P55735) NUCLEOPORIN SEH1 × 32 (Q96EE3) NUCLEAR PORE COMPLEX PROTEIN NUP85 × 32 (Q9BW27) NUCLEAR PORE COMPLEX PROTEIN NUP155 × 16 (O75694) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NU133_HUMAN
Isoform —
PDB entities 4
Chains and sequence ranges Author chain 3; PDBConstruct 1–1156; UniProt 1–1156 Author chain C; PDBConstruct 1–1156; UniProt 1–1156 Author chain L; PDBConstruct 1–1156; UniProt 1–1156 Author chain U; PDBConstruct 1–1156; UniProt 1–1156

NUCLEAR PORE COMPLEX PROTEIN NUP107

OrganismNot specified

UniProt P57740

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 304 NUCLEOPORIN NUP43 × 32 (Q8NFH3) NUCLEAR PORE COMPLEX PROTEIN NUP160 × 32 (Q12769) NUCLEOPORIN NUP37 × 32 (Q8NFH4) NUCLEAR PORE COMPLEX PROTEIN NUP133 × 32 (Q8WUM0) NUCLEAR PORE COMPLEX PROTEIN NUP96 × 32 (P52948) PROTEIN SEC13 HOMOLOG × 32 (P55735) NUCLEOPORIN SEH1 × 32 (Q96EE3) NUCLEAR PORE COMPLEX PROTEIN NUP85 × 32 (Q9BW27) NUCLEAR PORE COMPLEX PROTEIN NUP155 × 16 (O75694) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NU107_HUMAN
Isoform —
PDB entities 5
Chains and sequence ranges Author chain 4; PDBConstruct 1–925; UniProt 1–925 Author chain D; PDBConstruct 1–925; UniProt 1–925 Author chain M; PDBConstruct 1–925; UniProt 1–925 Author chain V; PDBConstruct 1–925; UniProt 1–925

NUCLEAR PORE COMPLEX PROTEIN NUP96

OrganismNot specified

UniProt P52948

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 304 NUCLEOPORIN NUP43 × 32 (Q8NFH3) NUCLEAR PORE COMPLEX PROTEIN NUP160 × 32 (Q12769) NUCLEOPORIN NUP37 × 32 (Q8NFH4) NUCLEAR PORE COMPLEX PROTEIN NUP133 × 32 (Q8WUM0) NUCLEAR PORE COMPLEX PROTEIN NUP107 × 32 (P57740) PROTEIN SEC13 HOMOLOG × 32 (P55735) NUCLEOPORIN SEH1 × 32 (Q96EE3) NUCLEAR PORE COMPLEX PROTEIN NUP85 × 32 (Q9BW27) NUCLEAR PORE COMPLEX PROTEIN NUP155 × 16 (O75694) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NUP98_HUMAN
Isoform —
PDB entities 6
Chains and sequence ranges Author chain 5; PDBConstruct 1–937; UniProt 881–1817 Author chain E; PDBConstruct 1–937; UniProt 881–1817 Author chain N; PDBConstruct 1–937; UniProt 881–1817 Author chain W; PDBConstruct 1–937; UniProt 881–1817

PROTEIN SEC13 HOMOLOG

OrganismNot specified

UniProt P55735

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 304 NUCLEOPORIN NUP43 × 32 (Q8NFH3) NUCLEAR PORE COMPLEX PROTEIN NUP160 × 32 (Q12769) NUCLEOPORIN NUP37 × 32 (Q8NFH4) NUCLEAR PORE COMPLEX PROTEIN NUP133 × 32 (Q8WUM0) NUCLEAR PORE COMPLEX PROTEIN NUP107 × 32 (P57740) NUCLEAR PORE COMPLEX PROTEIN NUP96 × 32 (P52948) NUCLEOPORIN SEH1 × 32 (Q96EE3) NUCLEAR PORE COMPLEX PROTEIN NUP85 × 32 (Q9BW27) NUCLEAR PORE COMPLEX PROTEIN NUP155 × 16 (O75694) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SEC13_HUMAN
Isoform —
PDB entities 7
Chains and sequence ranges Author chain 6; PDBConstruct 1–322; UniProt 1–322 Author chain F; PDBConstruct 1–322; UniProt 1–322 Author chain O; PDBConstruct 1–322; UniProt 1–322 Author chain X; PDBConstruct 1–322; UniProt 1–322

NUCLEOPORIN SEH1

OrganismNot specified

UniProt Q96EE3

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 304 NUCLEOPORIN NUP43 × 32 (Q8NFH3) NUCLEAR PORE COMPLEX PROTEIN NUP160 × 32 (Q12769) NUCLEOPORIN NUP37 × 32 (Q8NFH4) NUCLEAR PORE COMPLEX PROTEIN NUP133 × 32 (Q8WUM0) NUCLEAR PORE COMPLEX PROTEIN NUP107 × 32 (P57740) NUCLEAR PORE COMPLEX PROTEIN NUP96 × 32 (P52948) PROTEIN SEC13 HOMOLOG × 32 (P55735) NUCLEAR PORE COMPLEX PROTEIN NUP85 × 32 (Q9BW27) NUCLEAR PORE COMPLEX PROTEIN NUP155 × 16 (O75694) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SEH1_HUMAN
Isoform —
PDB entities 8
Chains and sequence ranges Author chain 7; PDBConstruct 1–360; UniProt 1–360 Author chain G; PDBConstruct 1–360; UniProt 1–360 Author chain P; PDBConstruct 1–360; UniProt 1–360 Author chain Y; PDBConstruct 1–360; UniProt 1–360

NUCLEAR PORE COMPLEX PROTEIN NUP85

OrganismNot specified

UniProt Q9BW27

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 304 NUCLEOPORIN NUP43 × 32 (Q8NFH3) NUCLEAR PORE COMPLEX PROTEIN NUP160 × 32 (Q12769) NUCLEOPORIN NUP37 × 32 (Q8NFH4) NUCLEAR PORE COMPLEX PROTEIN NUP133 × 32 (Q8WUM0) NUCLEAR PORE COMPLEX PROTEIN NUP107 × 32 (P57740) NUCLEAR PORE COMPLEX PROTEIN NUP96 × 32 (P52948) PROTEIN SEC13 HOMOLOG × 32 (P55735) NUCLEOPORIN SEH1 × 32 (Q96EE3) NUCLEAR PORE COMPLEX PROTEIN NUP155 × 16 (O75694) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NUP85_HUMAN
Isoform —
PDB entities 9
Chains and sequence ranges Author chain 8; PDBConstruct 1–656; UniProt 1–656 Author chain H; PDBConstruct 1–656; UniProt 1–656 Author chain Q; PDBConstruct 1–656; UniProt 1–656 Author chain Z; PDBConstruct 1–656; UniProt 1–656

NUCLEAR PORE COMPLEX PROTEIN NUP155

OrganismNot specified

UniProt O75694

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 304 NUCLEOPORIN NUP43 × 32 (Q8NFH3) NUCLEAR PORE COMPLEX PROTEIN NUP160 × 32 (Q12769) NUCLEOPORIN NUP37 × 32 (Q8NFH4) NUCLEAR PORE COMPLEX PROTEIN NUP133 × 32 (Q8WUM0) NUCLEAR PORE COMPLEX PROTEIN NUP107 × 32 (P57740) NUCLEAR PORE COMPLEX PROTEIN NUP96 × 32 (P52948) PROTEIN SEC13 HOMOLOG × 32 (P55735) NUCLEOPORIN SEH1 × 32 (Q96EE3) NUCLEAR PORE COMPLEX PROTEIN NUP85 × 32 (Q9BW27) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NU155_HUMAN
Isoform —
PDB entities 10
Chains and sequence ranges Author chain A; PDBConstruct 1–1391; UniProt 1–1391 Author chain B; PDBConstruct 1–1391; UniProt 1–1391

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id5a9q
Deposition date deposition_date2015-07-22
Structure title titleHuman nuclear pore complex
Keywords keywordsTRANSPORT PROTEIN; TRANSPORT PROTEIN
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

5a9q__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

5a9q__assembly_1__model_1 | I(q)

10-2 10-1 105 106 107 108 109 1010 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

5a9q__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)0.00 Å
Rg (electron density)552.20 Å
Total Rg552.20 Å
Atom count767072
Residues154800
Excluded volume12375000 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 5a9q__assembly_1__model_1 304-meric (304) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (10)

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7. Citations (1)