9w2m

Cryo-EM structure of the Cytoplasmic lattice(CPL) from mouse oocyte

Method: ELECTRON MICROSCOPY

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1. Protein Identity and Related Structures Protein Identity & Related Structures

Inactive protein-arginine deiminase type-6

OrganismNot specified

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 56	Oocyte-expressed protein homolog × 4 （Q9CWE6） KH domain-containing protein 3 × 2 （Q9CWU5） NLR family, pyrin domain containing 4F × 4 （L7N1W9） FBXW24 × 2 S-phase kinase-associated protein 1 × 2 （Q9WTX5） Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） E3 ubiquitin-protein ligase UHRF1 × 4 （Q8VDF2） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Tubulin beta-2A chain × 2 （Q7TMM9） Tubulin beta-2B chain × 2 （Q9CWF2） Isoform 4 of NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） Transducin-like enhancer protein 6 × 4 （Q9WVB3） GUANOSINE-5'-DIPHOSPHATE × 4 ADENOSINE-5'-DIPHOSPHATE × 4	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	PADI6_MOUSE
Isoform	—
PDB entities	1
Chains and sequence ranges	Author chain 1； PDBConstruct 1–682； UniProt 1–682 Author chain 11； PDBConstruct 1–682； UniProt 1–682 Author chain 12； PDBConstruct 1–682； UniProt 1–682 Author chain 13； PDBConstruct 1–682； UniProt 1–682 Author chain 14； PDBConstruct 1–682； UniProt 1–682 Author chain 15； PDBConstruct 1–682； UniProt 1–682 Author chain 16； PDBConstruct 1–682； UniProt 1–682 Author chain 17； PDBConstruct 1–682； UniProt 1–682 Author chain 18； PDBConstruct 1–682； UniProt 1–682 Author chain 19； PDBConstruct 1–682； UniProt 1–682 Author chain 2； PDBConstruct 1–682； UniProt 1–682 Author chain 3； PDBConstruct 1–682； UniProt 1–682 Author chain 4； PDBConstruct 1–682； UniProt 1–682 Author chain 5； PDBConstruct 1–682； UniProt 1–682 Author chain 6； PDBConstruct 1–682； UniProt 1–682 Author chain 7； PDBConstruct 1–682； UniProt 1–682 Author chain 8； PDBConstruct 1–682； UniProt 1–682 Author chain 9； PDBConstruct 1–682； UniProt 1–682 Author chain Z； PDBConstruct 1–682； UniProt 1–682 Author chain z； PDBConstruct 1–682； UniProt 1–682

Oocyte-expressed protein homolog

OrganismNot specified

UniProt Q9CWE6

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 56	Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） KH domain-containing protein 3 × 2 （Q9CWU5） NLR family, pyrin domain containing 4F × 4 （L7N1W9） FBXW24 × 2 S-phase kinase-associated protein 1 × 2 （Q9WTX5） Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） E3 ubiquitin-protein ligase UHRF1 × 4 （Q8VDF2） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Tubulin beta-2A chain × 2 （Q7TMM9） Tubulin beta-2B chain × 2 （Q9CWF2） Isoform 4 of NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） Transducin-like enhancer protein 6 × 4 （Q9WVB3） GUANOSINE-5'-DIPHOSPHATE × 4 ADENOSINE-5'-DIPHOSPHATE × 4	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	OOEP_MOUSE
Isoform	—
PDB entities	2
Chains and sequence ranges	Author chain C； PDBConstruct 1–125； UniProt 21–145 Author chain H； PDBConstruct 1–125； UniProt 21–145 Author chain c； PDBConstruct 1–125； UniProt 21–145 Author chain h； PDBConstruct 1–125； UniProt 21–145

KH domain-containing protein 3

OrganismNot specified

UniProt Q9CWU5

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 56	Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） Oocyte-expressed protein homolog × 4 （Q9CWE6） NLR family, pyrin domain containing 4F × 4 （L7N1W9） FBXW24 × 2 S-phase kinase-associated protein 1 × 2 （Q9WTX5） Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） E3 ubiquitin-protein ligase UHRF1 × 4 （Q8VDF2） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Tubulin beta-2A chain × 2 （Q7TMM9） Tubulin beta-2B chain × 2 （Q9CWF2） Isoform 4 of NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） Transducin-like enhancer protein 6 × 4 （Q9WVB3） GUANOSINE-5'-DIPHOSPHATE × 4 ADENOSINE-5'-DIPHOSPHATE × 4	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	KHDC3_MOUSE
Isoform	—
PDB entities	3
Chains and sequence ranges	Author chain D； PDBConstruct 1–128； UniProt 1–128 Author chain d； PDBConstruct 1–128； UniProt 1–128

NLR family, pyrin domain containing 4F

OrganismNot specified

UniProt L7N1W9

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 56	Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） Oocyte-expressed protein homolog × 4 （Q9CWE6） KH domain-containing protein 3 × 2 （Q9CWU5） FBXW24 × 2 S-phase kinase-associated protein 1 × 2 （Q9WTX5） Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） E3 ubiquitin-protein ligase UHRF1 × 4 （Q8VDF2） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Tubulin beta-2A chain × 2 （Q7TMM9） Tubulin beta-2B chain × 2 （Q9CWF2） Isoform 4 of NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） Transducin-like enhancer protein 6 × 4 （Q9WVB3） GUANOSINE-5'-DIPHOSPHATE × 4 ADENOSINE-5'-DIPHOSPHATE × 4	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	L7N1W9_MOUSE
Isoform	—
PDB entities	4
Chains and sequence ranges	Author chain E； PDBConstruct 1–933； UniProt 5–937 Author chain I； PDBConstruct 1–933； UniProt 5–937 Author chain e； PDBConstruct 1–933； UniProt 5–937 Author chain i； PDBConstruct 1–933； UniProt 5–937

S-phase kinase-associated protein 1

OrganismNot specified

UniProt Q9WTX5

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 56	Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） Oocyte-expressed protein homolog × 4 （Q9CWE6） KH domain-containing protein 3 × 2 （Q9CWU5） NLR family, pyrin domain containing 4F × 4 （L7N1W9） FBXW24 × 2 Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） E3 ubiquitin-protein ligase UHRF1 × 4 （Q8VDF2） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Tubulin beta-2A chain × 2 （Q7TMM9） Tubulin beta-2B chain × 2 （Q9CWF2） Isoform 4 of NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） Transducin-like enhancer protein 6 × 4 （Q9WVB3） GUANOSINE-5'-DIPHOSPHATE × 4 ADENOSINE-5'-DIPHOSPHATE × 4	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	SKP1_MOUSE
Isoform	—
PDB entities	6
Chains and sequence ranges	Author chain K； PDBConstruct 1–163； UniProt 1–163 Author chain k； PDBConstruct 1–163； UniProt 1–163

Ubiquitin-conjugating enzyme E2 D3

OrganismNot specified

UniProt P61079

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 56	Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） Oocyte-expressed protein homolog × 4 （Q9CWE6） KH domain-containing protein 3 × 2 （Q9CWU5） NLR family, pyrin domain containing 4F × 4 （L7N1W9） FBXW24 × 2 S-phase kinase-associated protein 1 × 2 （Q9WTX5） E3 ubiquitin-protein ligase UHRF1 × 4 （Q8VDF2） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Tubulin beta-2A chain × 2 （Q7TMM9） Tubulin beta-2B chain × 2 （Q9CWF2） Isoform 4 of NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） Transducin-like enhancer protein 6 × 4 （Q9WVB3） GUANOSINE-5'-DIPHOSPHATE × 4 ADENOSINE-5'-DIPHOSPHATE × 4	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	UB2D3_MOUSE
Isoform	—
PDB entities	7
Chains and sequence ranges	Author chain O； PDBConstruct 1–147； UniProt 1–147 Author chain o； PDBConstruct 1–147； UniProt 1–147

E3 ubiquitin-protein ligase UHRF1

OrganismNot specified

UniProt Q8VDF2

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 56	Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） Oocyte-expressed protein homolog × 4 （Q9CWE6） KH domain-containing protein 3 × 2 （Q9CWU5） NLR family, pyrin domain containing 4F × 4 （L7N1W9） FBXW24 × 2 S-phase kinase-associated protein 1 × 2 （Q9WTX5） Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Tubulin beta-2A chain × 2 （Q7TMM9） Tubulin beta-2B chain × 2 （Q9CWF2） Isoform 4 of NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） Transducin-like enhancer protein 6 × 4 （Q9WVB3） GUANOSINE-5'-DIPHOSPHATE × 4 ADENOSINE-5'-DIPHOSPHATE × 4	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	UHRF1_MOUSE
Isoform	—
PDB entities	8
Chains and sequence ranges	Author chain P； PDBConstruct 1–782； UniProt 1–782 Author chain Q； PDBConstruct 1–782； UniProt 1–782 Author chain p； PDBConstruct 1–782； UniProt 1–782 Author chain q； PDBConstruct 1–782； UniProt 1–782

Zinc finger BED domain-containing protein 3

OrganismNot specified

UniProt Q9D0L1

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 56	Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） Oocyte-expressed protein homolog × 4 （Q9CWE6） KH domain-containing protein 3 × 2 （Q9CWU5） NLR family, pyrin domain containing 4F × 4 （L7N1W9） FBXW24 × 2 S-phase kinase-associated protein 1 × 2 （Q9WTX5） Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） E3 ubiquitin-protein ligase UHRF1 × 4 （Q8VDF2） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Tubulin beta-2A chain × 2 （Q7TMM9） Tubulin beta-2B chain × 2 （Q9CWF2） Isoform 4 of NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） Transducin-like enhancer protein 6 × 4 （Q9WVB3） GUANOSINE-5'-DIPHOSPHATE × 4 ADENOSINE-5'-DIPHOSPHATE × 4	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	ZBED3_MOUSE
Isoform	—
PDB entities	9
Chains and sequence ranges	Author chain R； PDBConstruct 1–55； UniProt 34–88 Author chain r； PDBConstruct 1–55； UniProt 34–88

NACHT, LRR and PYD domains-containing protein 14

OrganismNot specified

UniProt Q6B966

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 56	Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） Oocyte-expressed protein homolog × 4 （Q9CWE6） KH domain-containing protein 3 × 2 （Q9CWU5） NLR family, pyrin domain containing 4F × 4 （L7N1W9） FBXW24 × 2 S-phase kinase-associated protein 1 × 2 （Q9WTX5） Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） E3 ubiquitin-protein ligase UHRF1 × 4 （Q8VDF2） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1） Tubulin beta-2A chain × 2 （Q7TMM9） Tubulin beta-2B chain × 2 （Q9CWF2） Isoform 4 of NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） Transducin-like enhancer protein 6 × 4 （Q9WVB3） GUANOSINE-5'-DIPHOSPHATE × 4 ADENOSINE-5'-DIPHOSPHATE × 4	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	NAL14_MOUSE
Isoform	—
PDB entities	10
Chains and sequence ranges	Author chain N； PDBConstruct 1–966； UniProt 28–993 Author chain n； PDBConstruct 1–966； UniProt 28–993

Tubulin beta-2A chain

OrganismNot specified

UniProt Q7TMM9

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 56	Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） Oocyte-expressed protein homolog × 4 （Q9CWE6） KH domain-containing protein 3 × 2 （Q9CWU5） NLR family, pyrin domain containing 4F × 4 （L7N1W9） FBXW24 × 2 S-phase kinase-associated protein 1 × 2 （Q9WTX5） Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） E3 ubiquitin-protein ligase UHRF1 × 4 （Q8VDF2） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Tubulin beta-2B chain × 2 （Q9CWF2） Isoform 4 of NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） Transducin-like enhancer protein 6 × 4 （Q9WVB3） GUANOSINE-5'-DIPHOSPHATE × 4 ADENOSINE-5'-DIPHOSPHATE × 4	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	TBB2A_MOUSE
Isoform	—
PDB entities	11
Chains and sequence ranges	Author chain L； PDBConstruct 1–445； UniProt 1–445 Author chain l； PDBConstruct 1–445； UniProt 1–445

Tubulin beta-2B chain

OrganismNot specified

UniProt Q9CWF2

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 56	Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） Oocyte-expressed protein homolog × 4 （Q9CWE6） KH domain-containing protein 3 × 2 （Q9CWU5） NLR family, pyrin domain containing 4F × 4 （L7N1W9） FBXW24 × 2 S-phase kinase-associated protein 1 × 2 （Q9WTX5） Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） E3 ubiquitin-protein ligase UHRF1 × 4 （Q8VDF2） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Tubulin beta-2A chain × 2 （Q7TMM9） Isoform 4 of NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） Transducin-like enhancer protein 6 × 4 （Q9WVB3） GUANOSINE-5'-DIPHOSPHATE × 4 ADENOSINE-5'-DIPHOSPHATE × 4	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	TBB2B_MOUSE
Isoform	—
PDB entities	12
Chains and sequence ranges	Author chain M； PDBConstruct 1–445； UniProt 1–445 Author chain m； PDBConstruct 1–445； UniProt 1–445

Isoform 4 of NACHT, LRR and PYD domains-containing protein 5

OrganismNot specified

UniProt Q9R1M5

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 56	Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） Oocyte-expressed protein homolog × 4 （Q9CWE6） KH domain-containing protein 3 × 2 （Q9CWU5） NLR family, pyrin domain containing 4F × 4 （L7N1W9） FBXW24 × 2 S-phase kinase-associated protein 1 × 2 （Q9WTX5） Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） E3 ubiquitin-protein ligase UHRF1 × 4 （Q8VDF2） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Tubulin beta-2A chain × 2 （Q7TMM9） Tubulin beta-2B chain × 2 （Q9CWF2） Transducin-like enhancer protein 6 × 4 （Q9WVB3） GUANOSINE-5'-DIPHOSPHATE × 4 ADENOSINE-5'-DIPHOSPHATE × 4	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	NALP5_MOUSE
Isoform	Q9R1M5-4
PDB entities	13
Chains and sequence ranges	Author chain A； PDBConstruct 1–963； UniProt 97–1059 Author chain F； PDBConstruct 1–963； UniProt 97–1059 Author chain a； PDBConstruct 1–963； UniProt 97–1059 Author chain f； PDBConstruct 1–963； UniProt 97–1059

Transducin-like enhancer protein 6

OrganismNot specified

UniProt Q9WVB3

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 56	Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） Oocyte-expressed protein homolog × 4 （Q9CWE6） KH domain-containing protein 3 × 2 （Q9CWU5） NLR family, pyrin domain containing 4F × 4 （L7N1W9） FBXW24 × 2 S-phase kinase-associated protein 1 × 2 （Q9WTX5） Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） E3 ubiquitin-protein ligase UHRF1 × 4 （Q8VDF2） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Tubulin beta-2A chain × 2 （Q7TMM9） Tubulin beta-2B chain × 2 （Q9CWF2） Isoform 4 of NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） GUANOSINE-5'-DIPHOSPHATE × 4 ADENOSINE-5'-DIPHOSPHATE × 4	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	TLE6_MOUSE
Isoform	—
PDB entities	14
Chains and sequence ranges	Author chain B； PDBConstruct 1–436； UniProt 146–581 Author chain G； PDBConstruct 1–436； UniProt 146–581 Author chain b； PDBConstruct 1–436； UniProt 146–581 Author chain g； PDBConstruct 1–436； UniProt 146–581

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id	9w2m
Deposition date deposition_date	2025-07-28
Structure title title	Cryo-EM structure of the Cytoplasmic lattice(CPL) from mouse oocyte
Keywords keywords	Cytoplasmic lattice, Maternal complex, Cryo-EM structure, Protein assembly, STRUCTURAL PROTEIN; STRUCTURAL PROTEIN
Experimental Method method	ELECTRON MICROSCOPY

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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

9w2m__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

9w2m__assembly_1__model_1 | I(q)

100 plotted points; both axes use logarithmic scales.

9w2m__assembly_1__model_1 | P(r) · Pending

P(r) will be calculated and displayed separately for the same assembly/model.

Rg（Guinier）	0.00 Å
Rg (electron density)	138.10 Å
Total Rg	138.10 Å
Atom count	234055
Residues	29468
Excluded volume	4193100 Å³
Maximum q	0.500 Å⁻¹

Assembly	Model	Structure unit	Oligomeric description	Status	CRYSOL	Actions
1	1	`9w2m__assembly_1__model_1`	56-meric （56）	Success	4.1.3-1-20251215 (887e7ef)	View Download

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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (16)

Entity 1 Entity 1 polymer

Description description	Inactive protein-arginine deiminase type-6
Molecular weight formula_weight	76854.1 kDa
Source method src_method	nat
Copy count entity_count	20

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	1,Z,z,2,3,4,5,6,7,8,9,12,11,19,15,16,14,13,17,18
Atom count atom_count	234055

MSFQNSLSLSLVNPTHALCMVGMEITLDISKCAPDKCKSFTIRGSPRILIHISSSVIAGKEDTVVWRSMNHPTVALVRMVAPSPTVDEDKVLVSYFCPDQEVPTATAVLFLTGIEISLEADIYRDGQLDMPSDKQAKKKWMWGMNGWGAILLVNCSPNAVGQPDEQSFQEGPREIQNLSQMNVTVEGPTSILQNYQLILHTSEEEAKKTRVYWSQRGSSAYELVVGPNKPVYLLPTFENRRKEAFYVEATEFPSPSFSGLISLSLSLVEKAHDECIPEIPLYKDTVMFRVAPYIFMPSTQMPLEVYLCRELQLQGFVDSVTKLSEKSKVQVVKVYEDPNRQSKWLQDEMAFCYTQAPHKTVSLILDTPRVSKLEDFPMKYTLTPGSGYLIRQTEDHRVASLDSIGNLMVSPPVKAQGKDYPLGRVLIGGSFYPSSEGRDMNKGLREFVYAQQVQAPVELFSDWLMTGHMDQFMCFVPTNDKNNDQKDFRLLLASPSACFELFEQKQKEGYGNVTLFEDIGAEQLLSNGRESKTISQILADKSFREQNTYVEKCISLNRTLLKTELGLEDKDIILIPQLFCLEQLTNVPSNQQSTKLFARPYFPDMLQIIVLGKNLGIPKPFGPKINGTCCLEEKVCGLLEPLGLKCTFIDDFDCYLANIGDVCASAIINRVPFAFKWWKMTP

Entity 2 Entity 2 polymer

Description description	Oocyte-expressed protein homolog
Molecular weight formula_weight	14294.6 kDa
Source method src_method	nat
Copy count entity_count	4

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	C,H,c,h

NVLPVSLRLRTRPWWFPIQEVSNPLVLYMEAWVAERVIGTDQAEISEIEWMCQALLTVDSVNSGNLAEITIFGQPSAQTRMKNILLNMAAWHKENELQRAVKVKEVEEFLKIRASSILSKLSKKG

Entity 3 Entity 3 polymer

Description description	KH domain-containing protein 3
Molecular weight formula_weight	15251.0 kDa
Source method src_method	nat
Copy count entity_count	2

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	D,d

MASLKRFQTLVPLDHKQGTLFEIIGEPKLPKWFHVECLEDPKRLYVEPRLLEIMFGKDGEHIPHLESMLHTLIHVNVWGPERRAEIWIFGPPPFRRDVDRMLTDLAHYCRMKLMEIEALEAGVERRRM

Entity 4 Entity 4 polymer

Description description	NLR family, pyrin domain containing 4F
Molecular weight formula_weight	107564.8 kDa
Source method src_method	nat
Copy count entity_count	4

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	E,I,e,i

ISDFGLIWYLRELNKKEFMKFKDFLIQEILELKLKQVSSTKVKKASREDLANLLLKCGENQAWDMTFRILQKINRKDLTERATGAIVGNPNLYRDHLKKKLTHDCPKKFNVRIQDFIKETFIQNDYDAFENLLISKGTERKPHMVFLKGMAGVGKTLMLKNLMLAWSKGLVFQNKFSYAFYFCCQDVKQLKTASLAELISREWPSPSAPIEEILSQPEKLLFIIDSLEGMEWDLTKQESELCDDCMEKQPVSTLLSSLLRRKMLPESSLLLSTTPETFEKMEDRIQCTDVKTATAFDERSMKIYFHRLFQDRKRAQEAFSLVRENKQLFTICQVPLLCWMVATCLKEEIEKGGDPVSLCRRTTSLYTTHIFSLFIPQSAQYPSKKSQDQLQGLCSLAAEGMWTDTFVFGKEALRRNGIFDSDIPTLLDIGMLGKIREFENSYIFLHPSVQEVCAAIFYMLKRHVEHPSQDVKNIETVLFMFLKKVKTQWIFLGCFIFGLLQKSEQEKLGVFFGHRLSKNIHHKLYQCLETLSGNAELQEQIDGMRLFSCLFEMEDEAFLVKAMNCMQQINFVAKNYSDFIVAAYCLKHCSTLKKLSFSTENVLNEGDQSYMEELLICWNNMCSVFVRSKDIQELRIKDTNFNEPAIRVLYESLKYPSFTLNKLVANNVSFGDNHVLFELIQNSSLQYLDLSCSFLSHNEVKLLCDILNQAECNIEKLMIAHCKLSPDDCKIFGSILMSSKSLKVLNLASNNLNQGISSLCKALCHPHCTLEYLVLSNCSLSEQCWDYLSEVLRQNKTLSHLDISSNDLKDEGLKILCRSLILPYCVLESLCLSCCGITERGCQDLAEVLKNNQNLKYLHVSYNKLKDTGVMLLCDAIKHPNCHLKDLQLEACEITDASNEELCYAFMQCETLQTLNLMGNAFEVSRMVFFPRF

Entity 5 Entity 5 polymer

Description description	FBXW24
Molecular weight formula_weight	53469.1 kDa
Source method src_method	nat
Copy count entity_count	2

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	J,j

MEIHLSSFPMMEIFSYLDAYSLLQVAQVNKNWNALASNDFLWRKLCQERWLFCDMVTLQLLGKETWKQFFVYRTWQEHVKSRAIPEDFTYKEIPLECGVRGYAGYISGCALTRNGQGKSVVCMVSSKNKISTWDISESVITWVSPVQPASIKLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLAGDILGNLYIFRIPDLHLISTVNVFPCGFDKIDCSPQKKWVLLSQNHPCIYPKVFYMSSLLRTSEFSDPVSTVLEFSLCKRAFWTPRREDRITLMSRRGRPIVTRFETFDMKLEENGNKTIVKGDLVASFSLQDYNENPKWMGVSDKSVIVCSTGSSLLLFSMKGLHLQTFQYSPEMIVRLWVDPVHVIITCNDGSIDVYMWEERSLLLKMCYRLQNGRHLPPFGFIKNLLCDDVSIVQLMIDRQGPCFLMAYTLNICS

Entity 6 Entity 6 polymer

Description description	S-phase kinase-associated protein 1
Molecular weight formula_weight	18694.0 kDa
Source method src_method	nat
Copy count entity_count	2

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	K,k

MPTIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK

Entity 7 Entity 7 polymer

Description description	Ubiquitin-conjugating enzyme E2 D3
Molecular weight formula_weight	16706.1 kDa
EC 编号 ec_number	2.3.2.23,2.3.2.24
Source method src_method	nat
Copy count entity_count	2

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	O,o

MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM

Entity 8 Entity 8 polymer

Description description	E3 ubiquitin-protein ligase UHRF1
Molecular weight formula_weight	88436.8 kDa
EC 编号 ec_number	2.3.2.27
Source method src_method	nat
Copy count entity_count	4

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	Q,q,P,p

MWIQVRTMDGKETHTVNSLSRLTKVQELRKKIEEVFHVEPQLQRLFYRGKQMEDGHTLFDYDVRLNDTIQLLVRQSLALPLSTKERDSELSDSDSGYGVGHSESDKSSTHGEGAAEADDKTVWEDTDLGLYKVNEYVDVRDNIFGAWFEAQVVQVQKRALSEDEPCSSSAVKTSEDDIMYHVKYDDYPEHGVDIVKAKNVRARARTVIPWENLEVGQVVMANYNVDYPRKRGFWYDVEICRKRQTRTARELYGNIRLLNDSQLNNCRIMFVDEVLMIELPKERRPLIASPSQPPPALRNTGKSGPSCRFCKDDENKPCRKCACHVCGGREAPEKQLLCDECDMAFHLYCLKPPLTSVPPEPEWYCPSCRTDSSEVVQAGEKLKESKKKAKMASATSSSRRDWGKGMACVGRTTECTIVPANHFGPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDNGNYFTYTGSGGRDLSGNKRTAGQSSDQKLTNNNRALALNCHSPINEKGAEAEDWRQGKPVRVVRNMKGGKHSKYAPAEGNRYDGIYKVVKYWPERGKSGFLVWRYLLRRDDTEPEPWTREGKDRTRQLGLTMQYPEGYLEALANKEKSRKRPAKALEQGPSSSKTGKSKQKSTGPTLSSPRASKKSKLEPYTLSEQQANLIKEDKGNAKLWDDVLTSLQDGPYQIFLSKVKEAFQCICCQELVFRPVTTVCQHNVCKDCLDRSFRAQVFSCPACRFELDHSSPTRVNQPLQTILNQLFPGYGSGR

Entity 9 Entity 9 polymer

Description description	Zinc finger BED domain-containing protein 3
Molecular weight formula_weight	6370.3 kDa
Source method src_method	nat
Copy count entity_count	2

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	R,r

SYSEAWGYFHLDPAQPRHRMMSAWATCRLCGLQVGGLPNFQMWTRALCQHLSDVH

Entity 10 Entity 10 polymer

Description description	NACHT, LRR and PYD domains-containing protein 14
Molecular weight formula_weight	110369.0 kDa
Source method src_method	nat
Copy count entity_count	2

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	N,n

IDYRTVIKENIFTMWYKTSLHGEFATLNCVITPKDQNLLQHIFDEDIQTSEAPQTVVLQGAAGIGKTTLLKKAVLEWADGNLYQQFTHVFYLNGKEISQVKEKSFAQLISKHWPSSEGPIEQVLSKPSSLLFIIDSFDELDFSFEEPQFALCKDWTQISPVSFLISSLLRKVMLPESYLLVATRSTAWKRLVPLLQKPQRVKLSGLSKNARMDYIHHLLKDKAWATSAIYSLRMNWRLFHMCHVCHMCQMICAVLKGQVEKGGRVEETCKTSTALFTYYICSLFPRIPVGCVTLPNETLLRSLCKAAVEGIWTMKHVLYQQNLRKHELTREDILLFLDAKVLQQDTEYENCYMFTHLHVQEFFAALFYLLRENLEEQDYPSEPFENLYLLLESNHIHDPHLEQMKCFLFGLLNKDRVRQLEETFNLTISMEVREELLACLEGLEKDDSSLSQLRFQDLLHCIYETQDQEFITQALMYFQKIIVRVDEEPQLRIYSFCLKHCHTLKTMRLTARADLKNMLDTAEMCLEGAAVQVIHYWQDLFSVLHTNESLIEMDLYESRLDESLMKILNEELSHPKCKLQKLIFRAVDFLNGCQDFTFLASNKKVTHLDLKETDLGVNGLKTLCEALKCKGCKLRVLRLASCDLNVARCQKLSNALQTNRSLVFLNLSLNNLSNDGVKSLCEVLENPNSSLERLALASCGLTKAGCKVLSSALTKSKRLTHLCLSDNVLEDEGIKLLSHTLKHPQCTLQSLVLRSCSFTPIGSEHLSTALLHNRSLVHLDLGQNKLADNGVKLLCHSLQQPHCNLQELELMSCVLTSKACGDLASVLVNNSNLWSLDLGHNILDDAGLNILCDALRNPNCHVQRLGLENCGLTPGCCQDLLGILSNNKSVIQMNLMKNALDHESIKNLCKVLRSPTCKMEFLALDKKEILKKKIKKFLVDVRINNPHLVIGPECPNTESGCWWNYF

Entity 11 Entity 11 polymer

Description description	Tubulin beta-2A chain
Molecular weight formula_weight	49953.8 kDa
Source method src_method	nat
Copy count entity_count	2

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	L,l

MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEQGEFEEEEGEDEA

Entity 12 Entity 12 polymer

Description description	Tubulin beta-2B chain
Molecular weight formula_weight	49999.9 kDa
Source method src_method	nat
Copy count entity_count	2

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	M,m

MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEQGEFEEEEGEDEA

Entity 13 Entity 13 polymer

Description description	Isoform 4 of NACHT, LRR and PYD domains-containing protein 5
Molecular weight formula_weight	109296.8 kDa
Source method src_method	nat
Copy count entity_count	4

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	A,F,a,f

DLQDYKAHVIAKFDTSVDLHYDSPEMKLLSDAFKPYQKTFQPHTIILHGRPGVGKSALARSIVLGWAQGKLFQKMSFVIFFSVREIKWTEKSSLAQLIAKECPDSWDLVTKIMSQPERLLFVIDGLDDMDSVLQHDDMTLSRDWKDEQPIYILMYSLLRKALLPQSFLIITTRNTGLEKLKSMVVSPLYILVEGLSASRRSQLVLENISNESDRIQVFHSLIENHQLFDQCQAPSVCSLVCEALQLQKKLGKRCTLPCQTLTGLYATLVFHQLTLKRPSQSALSQEEQITLVGLCMMAAEGVWTMRSVFYDDDLKNYSLKESEILALFHMNILLQVGHNSEQCYVFSHLSLQDFFAALYYVLEGLEEWNQHFCFIENQRSIMEVKRTDDTRLLGMKRFLFGLMNKDILKTLEVLFEYPVIPTVEQKLQHWVSLIAQQVNGTSPMDTLDAFYCLFESQDEEFVGGALKRFQEVWLLINQKMDLKVSSYCLKHCQNLKAIRVDIRDLLSVDNTLELCPVVTVQETQCKPLLMEWWGNFCSVLGSLRNLKELDLGDSILSQRAMKILCLELRNQSCRIQKLTFKSAEVVSGLKHLWKLLFSNQNLKYLNLGNTPMKDDDMKLACEALKHPKCSVETLRLDSCELTIIGYEMISTLLISTTRLKCLSLAKNRVGVKSMISLGNALSSSMCLLQKLILDNCGLTPASCHLLVSALFSNQNLTHLCLSNNSLGTEGVQQLCQFLRNPECALQRLILNHCNIVDDAYGFLAMRLANNTKLTHLSLTMNPVGDGAMKLLCEALKEPTCYLQELELVDCQLTQNCCEDLACMITTTKHLKSLDLGNNALGDKGVITLCEGLKQSSSSLRRLGLGACKLTSNCCEALSLAISCNPHLNSLNLVKNDFSTSGMLKLCSAFQCPVSNLGIIGLWKQEYYARVRRQLEEVEFVKPHVVIDGDWYASDEDDRNWWKN

Entity 14 Entity 14 polymer

Description description	Transducin-like enhancer protein 6
Molecular weight formula_weight	49005.3 kDa
Source method src_method	nat
Copy count entity_count	4

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	B,G,b,g

DPQPVWDAEPQFCQGFLIQGLWELFMDSRQKNQQEHGGEDSSQESKDSGLCDFKPEPQPRHRNSLSDSADPFLIKSPSALLDYYQEDVSRPQPETQESSGRADKFLKPLSWGSEVLESSCNQPSTALWQLERFTVPQALQKVRVLKHQELLLVVAVSSFTRHVFTCSQSGIKVWNLVNQVAEDRDPESHLKCSVQDNKVYLRTCLLSSNSRTLFAGGYNLPGVIVWDLAAPSLYEKCQLPCEGLSCQALANTKENMALAGFTDGTVRIWDLRTQEIVRNLKGPTNSARNLVVKDDNIWTGGLDACLRCWDLRMAKVSLEHLFQSQIMSLAHSPTEDWLLLGLANGQHCLFNSRKRDQVLTVDTKDNTILGLKFSPNGKWWASVGMGNFITVHSMPTGAKLFQVPEVGPVRCFDMTENGRLIITGSRDCASVYHIKY

Entity 15 Entity 15 non-polymer

Description description	GUANOSINE-5'-DIPHOSPHATE
Molecular weight formula_weight	443.2 kDa
Source method src_method	syn
Copy count entity_count	4

Entity 16 Entity 16 non-polymer

Description description	ADENOSINE-5'-DIPHOSPHATE
Molecular weight formula_weight	427.2 kDa
Source method src_method	syn
Copy count entity_count	4

▶

Resolution resolution	4.20 Å
Resolution测定Method resolution_method	—
颗粒数 num_particles	676923

Cryo-EM structure of the Cytoplasmic lattice(CPL) from mouse oocyte

1. Protein Identity and Related Structures Protein Identity & Related Structures

Inactive protein-arginine deiminase type-6

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

Oocyte-expressed protein homolog

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

KH domain-containing protein 3

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

NLR family, pyrin domain containing 4F

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

S-phase kinase-associated protein 1

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

Ubiquitin-conjugating enzyme E2 D3

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

E3 ubiquitin-protein ligase UHRF1

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

Zinc finger BED domain-containing protein 3

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

NACHT, LRR and PYD domains-containing protein 14

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

Tubulin beta-2A chain

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer