9sfp

Native cytoplasmic lattices from mouse oocytes

Method: ELECTRON MICROSCOPY

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1. Protein Identity and Related Structures Protein Identity & Related Structures

F-box and WD-40 domain protein 12

OrganismNot specified

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 54	KH domain-containing protein 3 × 2 （Q9CWU5） NLR family, pyrin domain containing 4F × 4 （L7N1W9） NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Oocyte-expressed protein homolog × 4 （Q9CWE6） Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） Transducin-like enhancer protein 6 × 4 （Q9WVB3） Tubulin alpha-1A chain × 2 （P68369） Tubulin beta-4B chain × 2 （P68372） Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） E3 ubiquitin-protein ligase UHRF1 × 2 （Q8VDF2） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	Q5U467_MOUSE
Isoform	—
PDB entities	1
Chains and sequence ranges	Author chain A； PDBConstruct 1–468； UniProt 1–468 Author chain B； PDBConstruct 1–468； UniProt 1–468

KH domain-containing protein 3

OrganismNot specified

UniProt Q9CWU5

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 54	F-box and WD-40 domain protein 12 × 4 （Q5U467） NLR family, pyrin domain containing 4F × 4 （L7N1W9） NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Oocyte-expressed protein homolog × 4 （Q9CWE6） Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） Transducin-like enhancer protein 6 × 4 （Q9WVB3） Tubulin alpha-1A chain × 2 （P68369） Tubulin beta-4B chain × 2 （P68372） Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） E3 ubiquitin-protein ligase UHRF1 × 2 （Q8VDF2） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	KHDC3_MOUSE
Isoform	—
PDB entities	2
Chains and sequence ranges	Author chain C； PDBConstruct 1–440； UniProt 1–440

NLR family, pyrin domain containing 4F

OrganismNot specified

UniProt L7N1W9

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 54	F-box and WD-40 domain protein 12 × 4 （Q5U467） KH domain-containing protein 3 × 2 （Q9CWU5） NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Oocyte-expressed protein homolog × 4 （Q9CWE6） Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） Transducin-like enhancer protein 6 × 4 （Q9WVB3） Tubulin alpha-1A chain × 2 （P68369） Tubulin beta-4B chain × 2 （P68372） Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） E3 ubiquitin-protein ligase UHRF1 × 2 （Q8VDF2） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	L7N1W9_MOUSE
Isoform	—
PDB entities	3
Chains and sequence ranges	Author chain D； PDBConstruct 1–937； UniProt 1–937 Author chain F； PDBConstruct 1–937； UniProt 1–937

NACHT, LRR and PYD domains-containing protein 5

OrganismNot specified

UniProt Q9R1M5

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 54	F-box and WD-40 domain protein 12 × 4 （Q5U467） KH domain-containing protein 3 × 2 （Q9CWU5） NLR family, pyrin domain containing 4F × 4 （L7N1W9） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Oocyte-expressed protein homolog × 4 （Q9CWE6） Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） Transducin-like enhancer protein 6 × 4 （Q9WVB3） Tubulin alpha-1A chain × 2 （P68369） Tubulin beta-4B chain × 2 （P68372） Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） E3 ubiquitin-protein ligase UHRF1 × 2 （Q8VDF2） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	NALP5_MOUSE
Isoform	—
PDB entities	4
Chains and sequence ranges	Author chain H； PDBConstruct 1–1163； UniProt 1–1163 Author chain I； PDBConstruct 1–1163； UniProt 1–1163

NACHT, LRR and PYD domains-containing protein 14

OrganismNot specified

UniProt Q6B966

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 54	F-box and WD-40 domain protein 12 × 4 （Q5U467） KH domain-containing protein 3 × 2 （Q9CWU5） NLR family, pyrin domain containing 4F × 4 （L7N1W9） NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） Oocyte-expressed protein homolog × 4 （Q9CWE6） Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） Transducin-like enhancer protein 6 × 4 （Q9WVB3） Tubulin alpha-1A chain × 2 （P68369） Tubulin beta-4B chain × 2 （P68372） Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） E3 ubiquitin-protein ligase UHRF1 × 2 （Q8VDF2） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	NAL14_MOUSE
Isoform	—
PDB entities	5
Chains and sequence ranges	Author chain J； PDBConstruct 1–993； UniProt 1–993

Oocyte-expressed protein homolog

OrganismNot specified

UniProt Q9CWE6

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 54	F-box and WD-40 domain protein 12 × 4 （Q5U467） KH domain-containing protein 3 × 2 （Q9CWU5） NLR family, pyrin domain containing 4F × 4 （L7N1W9） NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） Transducin-like enhancer protein 6 × 4 （Q9WVB3） Tubulin alpha-1A chain × 2 （P68369） Tubulin beta-4B chain × 2 （P68372） Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） E3 ubiquitin-protein ligase UHRF1 × 2 （Q8VDF2） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	OOEP_MOUSE
Isoform	—
PDB entities	6
Chains and sequence ranges	Author chain K； PDBConstruct 1–164； UniProt 1–164 Author chain L； PDBConstruct 1–164； UniProt 1–164

Inactive protein-arginine deiminase type-6

OrganismNot specified

UniProt Q8K3V4

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 54	F-box and WD-40 domain protein 12 × 4 （Q5U467） KH domain-containing protein 3 × 2 （Q9CWU5） NLR family, pyrin domain containing 4F × 4 （L7N1W9） NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Oocyte-expressed protein homolog × 4 （Q9CWE6） Transducin-like enhancer protein 6 × 4 （Q9WVB3） Tubulin alpha-1A chain × 2 （P68369） Tubulin beta-4B chain × 2 （P68372） Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） E3 ubiquitin-protein ligase UHRF1 × 2 （Q8VDF2） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	PADI6_MOUSE
Isoform	—
PDB entities	7
Chains and sequence ranges	Author chain M； PDBConstruct 1–682； UniProt 1–682 Author chain N； PDBConstruct 1–682； UniProt 1–682 Author chain O； PDBConstruct 1–682； UniProt 1–682 Author chain P； PDBConstruct 1–682； UniProt 1–682 Author chain Q； PDBConstruct 1–682； UniProt 1–682 Author chain R； PDBConstruct 1–682； UniProt 1–682 Author chain S； PDBConstruct 1–682； UniProt 1–682 Author chain T； PDBConstruct 1–682； UniProt 1–682 Author chain U； PDBConstruct 1–682； UniProt 1–682 Author chain V； PDBConstruct 1–682； UniProt 1–682

Transducin-like enhancer protein 6

OrganismNot specified

UniProt Q9WVB3

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 54	F-box and WD-40 domain protein 12 × 4 （Q5U467） KH domain-containing protein 3 × 2 （Q9CWU5） NLR family, pyrin domain containing 4F × 4 （L7N1W9） NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Oocyte-expressed protein homolog × 4 （Q9CWE6） Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） Tubulin alpha-1A chain × 2 （P68369） Tubulin beta-4B chain × 2 （P68372） Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） E3 ubiquitin-protein ligase UHRF1 × 2 （Q8VDF2） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	TLE6_MOUSE
Isoform	—
PDB entities	8
Chains and sequence ranges	Author chain W； PDBConstruct 1–581； UniProt 1–581 Author chain Y； PDBConstruct 1–581； UniProt 1–581

Tubulin alpha-1A chain

OrganismNot specified

UniProt P68369

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 54	F-box and WD-40 domain protein 12 × 4 （Q5U467） KH domain-containing protein 3 × 2 （Q9CWU5） NLR family, pyrin domain containing 4F × 4 （L7N1W9） NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Oocyte-expressed protein homolog × 4 （Q9CWE6） Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） Transducin-like enhancer protein 6 × 4 （Q9WVB3） Tubulin beta-4B chain × 2 （P68372） Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） E3 ubiquitin-protein ligase UHRF1 × 2 （Q8VDF2） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	TBA1A_MOUSE
Isoform	—
PDB entities	9
Chains and sequence ranges	Author chain a； PDBConstruct 1–451； UniProt 1–451

Tubulin beta-4B chain

OrganismNot specified

UniProt P68372

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 54	F-box and WD-40 domain protein 12 × 4 （Q5U467） KH domain-containing protein 3 × 2 （Q9CWU5） NLR family, pyrin domain containing 4F × 4 （L7N1W9） NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Oocyte-expressed protein homolog × 4 （Q9CWE6） Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） Transducin-like enhancer protein 6 × 4 （Q9WVB3） Tubulin alpha-1A chain × 2 （P68369） Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） E3 ubiquitin-protein ligase UHRF1 × 2 （Q8VDF2） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	TBB4B_MOUSE
Isoform	—
PDB entities	10
Chains and sequence ranges	Author chain b； PDBConstruct 1–445； UniProt 1–445

Ubiquitin-conjugating enzyme E2 D3

OrganismNot specified

UniProt P61079

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 54	F-box and WD-40 domain protein 12 × 4 （Q5U467） KH domain-containing protein 3 × 2 （Q9CWU5） NLR family, pyrin domain containing 4F × 4 （L7N1W9） NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Oocyte-expressed protein homolog × 4 （Q9CWE6） Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） Transducin-like enhancer protein 6 × 4 （Q9WVB3） Tubulin alpha-1A chain × 2 （P68369） Tubulin beta-4B chain × 2 （P68372） E3 ubiquitin-protein ligase UHRF1 × 2 （Q8VDF2） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	UB2D3_MOUSE
Isoform	—
PDB entities	11
Chains and sequence ranges	Author chain c； PDBConstruct 1–147； UniProt 1–147

E3 ubiquitin-protein ligase UHRF1

OrganismNot specified

UniProt Q8VDF2

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 54	F-box and WD-40 domain protein 12 × 4 （Q5U467） KH domain-containing protein 3 × 2 （Q9CWU5） NLR family, pyrin domain containing 4F × 4 （L7N1W9） NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Oocyte-expressed protein homolog × 4 （Q9CWE6） Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） Transducin-like enhancer protein 6 × 4 （Q9WVB3） Tubulin alpha-1A chain × 2 （P68369） Tubulin beta-4B chain × 2 （P68372） Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） Zinc finger BED domain-containing protein 3 × 2 （Q9D0L1）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	UHRF1_MOUSE
Isoform	—
PDB entities	12
Chains and sequence ranges	Author chain d； PDBConstruct 1–782； UniProt 1–782

Zinc finger BED domain-containing protein 3

OrganismNot specified

UniProt Q9D0L1

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 54	F-box and WD-40 domain protein 12 × 4 （Q5U467） KH domain-containing protein 3 × 2 （Q9CWU5） NLR family, pyrin domain containing 4F × 4 （L7N1W9） NACHT, LRR and PYD domains-containing protein 5 × 4 （Q9R1M5） NACHT, LRR and PYD domains-containing protein 14 × 2 （Q6B966） Oocyte-expressed protein homolog × 4 （Q9CWE6） Inactive protein-arginine deiminase type-6 × 20 （Q8K3V4） Transducin-like enhancer protein 6 × 4 （Q9WVB3） Tubulin alpha-1A chain × 2 （P68369） Tubulin beta-4B chain × 2 （P68372） Ubiquitin-conjugating enzyme E2 D3 × 2 （P61079） E3 ubiquitin-protein ligase UHRF1 × 2 （Q8VDF2）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	ZBED3_MOUSE
Isoform	—
PDB entities	13
Chains and sequence ranges	Author chain e； PDBConstruct 1–228； UniProt 1–228

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id	9sfp
Deposition date deposition_date	2025-08-20
Structure title title	Native cytoplasmic lattices from mouse oocytes
Keywords keywords	oocyte, embryo, cytoskeleton, tubulin, ubiquitin, STRUCTURAL PROTEIN; STRUCTURAL PROTEIN
Experimental Method method	ELECTRON MICROSCOPY

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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

9sfp__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

9sfp__assembly_1__model_1 | I(q)

100 plotted points; both axes use logarithmic scales.

9sfp__assembly_1__model_1 | P(r) · Pending

P(r) will be calculated and displayed separately for the same assembly/model.

Rg（Guinier）	0.00 Å
Rg (electron density)	136.20 Å
Total Rg	136.30 Å
Atom count	234708
Residues	29538
Excluded volume	4209500 Å³
Maximum q	0.500 Å⁻¹

Assembly	Model	Structure unit	Oligomeric description	Status	CRYSOL	Actions
1	1	`9sfp__assembly_1__model_1`	54-meric （54）	Success	4.1.3-1-20251215 (887e7ef)	View Download

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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (13)

Entity 1 Entity 1 polymer

Description description	F-box and WD-40 domain protein 12
Molecular weight formula_weight	54036.7 kDa
Source method src_method	nat
Copy count entity_count	2

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	A,B
Atom count atom_count	117354

MEVHLPRLPLMKIFSYLDAYSLLQAAQVNKNWNELASSDVLWRKLCQKRWLFCDMVTLQLLGTETWKQFFVFRTWQEHAKTRAKPEDFTYKEIPAEYGFRANACYISGCGLTRNVQDRSVICMVSSMTKLSTWDIREGIMTWVSTEQPAYIKLLTTLPEMHIAVTVDTHSTIKLWDCHNREALATNCLFSSCKLLKAVFSKDDPIVLVGDISGNLYIFRIPDLHLISKVNVFPYGIDELHCSPQKKWVFLIMKHPRVLTKVVYMNSLLRTSEFSAPVSTILKFSLCDKAFWTPRREDRITQMSRGVPPRPTKFATFDMKLEEIGNKVTVQEYLVASFSLQDYEASPEWMGVSNKDVIVCSTGSSLLLFNIHGLRLQTFHYCPEEILRLWVDPLHVIVTCNDGSMDVYAWEERSLLLRKCYRLQNRRNLPPESFIFKTLCDDVSIIGVMTNSPAPCFLMAYTLASALEN

Entity 2 Entity 2 polymer

Description description	KH domain-containing protein 3
Molecular weight formula_weight	48055.3 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	C

MASLKRFQTLVPLDHKQGTLFEIIGEPKLPKWFHVECLEDPKRLYVEPRLLEIMFGKDGEHIPHLESMLHTLIHVNVWGPERRAEIWIFGPPPFRRDVDRMLTDLAHYCRMKLMEIEALEAGVERRRMAAHKAATQPAPVKVREAAPRPASVKVPETATQPAPVKVREAAPQPAPVQEVREAAPQQASVQEEVREAATEQAPVQEVREAATEQAPVQEVSEAATEQAPVQEVNEAATEQASVQAVREAATRPAPGKVRKAATQPAPVQVCQEATQLAPVKVREAATQPASGKVREAATQLAPVKVRKAATQLAPVKVHEAATQPAPGKVSDAATQSASVQVREAATQLSPVEATDTSQLAQVKADEAFAQHTSGEAHQVANGQSPIEVCETATGQHSLDVSRALSQKCPEVFEWETQSCLDGSYVIVQPPRDAWESFIIL

Entity 3 Entity 3 polymer

Description description	NLR family, pyrin domain containing 4F
Molecular weight formula_weight	108001.3 kDa
Source method src_method	nat
Copy count entity_count	2

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	D,F

MASFISDFGLIWYLRELNKKEFMKFKDFLIQEILELKLKQVSSTKVKKASREDLANLLLKCGENQAWDMTFRILQKINRKDLTERATGAIVGNPNLYRDHLKKKLTHDCPKKFNVRIQDFIKETFIQNDYDAFENLLISKGTERKPHMVFLKGMAGVGKTLMLKNLMLAWSKGLVFQNKFSYAFYFCCQDVKQLKTASLAELISREWPSPSAPIEEILSQPEKLLFIIDSLEGMEWDLTKQESELCDDCMEKQPVSTLLSSLLRRKMLPESSLLLSTTPETFEKMEDRIQCTDVKTATAFDERSMKIYFHRLFQDRKRAQEAFSLVRENKQLFTICQVPLLCWMVATCLKEEIEKGGDPVSLCRRTTSLYTTHIFSLFIPQSAQYPSKKSQDQLQGLCSLAAEGMWTDTFVFGKEALRRNGIFDSDIPTLLDIGMLGKIREFENSYIFLHPSVQEVCAAIFYMLKRHVEHPSQDVKNIETVLFMFLKKVKTQWIFLGCFIFGLLQKSEQEKLGVFFGHRLSKNIHHKLYQCLETLSGNAELQEQIDGMRLFSCLFEMEDEAFLVKAMNCMQQINFVAKNYSDFIVAAYCLKHCSTLKKLSFSTENVLNEGDQSYMEELLICWNNMCSVFVRSKDIQELRIKDTNFNEPAIRVLYESLKYPSFTLNKLVANNVSFGDNHVLFELIQNSSLQYLDLSCSFLSHNEVKLLCDILNQAECNIEKLMIAHCKLSPDDCKIFGSILMSSKSLKVLNLASNNLNQGISSLCKALCHPHCTLEYLVLSNCSLSEQCWDYLSEVLRQNKTLSHLDISSNDLKDEGLKILCRSLILPYCVLESLCLSCCGITERGCQDLAEVLKNNQNLKYLHVSYNKLKDTGVMLLCDAIKHPNCHLKDLQLEACEITDASNEELCYAFMQCETLQTLNLMGNAFEVSRMVFFPRF

Entity 4 Entity 4 polymer

Description description	NACHT, LRR and PYD domains-containing protein 5
Molecular weight formula_weight	131468.5 kDa
Source method src_method	nat
Copy count entity_count	2

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	H,I

MGPPEKESKAILKARGLEEEQKSERKMTSPENDSKSIQKDQGPEQEQTSESTMGPPEKESKAILKARGLEEEQKSERKMTSPENDSKSIQKDQGPEQEQTSESTMGPPEKDSKAILKARGLEEEQKSESTMSPSENVSRAILKDSGSEEVEQASERKMTSPENDSKSIQKDQGPEQEQTSETLQSKEEDEVTEADKDNGGDLQDYKAHVIAKFDTSVDLHYDSPEMKLLSDAFKPYQKTFQPHTIILHGRPGVGKSALARSIVLGWAQGKLFQKMSFVIFFSVREIKWTEKSSLAQLIAKECPDSWDLVTKIMSQPERLLFVIDGLDDMDSVLQHDDMTLSRDWKDEQPIYILMYSLLRKALLPQSFLIITTRNTGLEKLKSMVVSPLYILVEGLSASRRSQLVLENISNESDRIQVFHSLIENHQLFDQCQAPSVCSLVCEALQLQKKLGKRCTLPCQTLTGLYATLVFHQLTLKRPSQSALSQEEQITLVGLCMMAAEGVWTMRSVFYDDDLKNYSLKESEILALFHMNILLQVGHNSEQCYVFSHLSLQDFFAALYYVLEGLEEWNQHFCFIENQRSIMEVKRTDDTRLLGMKRFLFGLMNKDILKTLEVLFEYPVIPTVEQKLQHWVSLIAQQVNGTSPMDTLDAFYCLFESQDEEFVGGALKRFQEVWLLINQKMDLKVSSYCLKHCQNLKAIRVDIRDLLSVDNTLELCPVVTVQETQCKPLLMEWWGNFCSVLGSLRNLKELDLGDSILSQRAMKILCLELRNQSCRIQKLTFKSAEVVSGLKHLWKLLFSNQNLKYLNLGNTPMKDDDMKLACEALKHPKCSVETLRLDSCELTIIGYEMISTLLISTTRLKCLSLAKNRVGVKSMISLGNALSSSMCLLQKLILDNCGLTPASCHLLVSALFSNQNLTHLCLSNNSLGTEGVQQLCQFLRNPECALQRLILNHCNIVDDAYGFLAMRLANNTKLTHLSLTMNPVGDGAMKLLCEALKEPTCYLQELELVDCQLTQNCCEDLACMITTTKHLKSLDLGNNALGDKGVITLCEGLKQSSSSLRRLGLGACKLTSNCCEALSLAISCNPHLNSLNLVKNDFSTSGMLKLCSAFQCPVSNLGIIGLWKQEYYARVRRQLEEVEFVKPHVVIDGDWYASDEDDRNWWKN

Entity 5 Entity 5 polymer

Description description	NACHT, LRR and PYD domains-containing protein 14
Molecular weight formula_weight	113527.2 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	J

MKTEDDEMEYEASKEETVSEDKDFDDGIDYRTVIKENIFTMWYKTSLHGEFATLNCVITPKDQNLLQHIFDEDIQTSEAPQTVVLQGAAGIGKTTLLKKAVLEWADGNLYQQFTHVFYLNGKEISQVKEKSFAQLISKHWPSSEGPIEQVLSKPSSLLFIIDSFDELDFSFEEPQFALCKDWTQISPVSFLISSLLRKVMLPESYLLVATRSTAWKRLVPLLQKPQRVKLSGLSKNARMDYIHHLLKDKAWATSAIYSLRMNWRLFHMCHVCHMCQMICAVLKGQVEKGGRVEETCKTSTALFTYYICSLFPRIPVGCVTLPNETLLRSLCKAAVEGIWTMKHVLYQQNLRKHELTREDILLFLDAKVLQQDTEYENCYMFTHLHVQEFFAALFYLLRENLEEQDYPSEPFENLYLLLESNHIHDPHLEQMKCFLFGLLNKDRVRQLEETFNLTISMEVREELLACLEGLEKDDSSLSQLRFQDLLHCIYETQDQEFITQALMYFQKIIVRVDEEPQLRIYSFCLKHCHTLKTMRLTARADLKNMLDTAEMCLEGAAVQVIHYWQDLFSVLHTNESLIEMDLYESRLDESLMKILNEELSHPKCKLQKLIFRAVDFLNGCQDFTFLASNKKVTHLDLKETDLGVNGLKTLCEALKCKGCKLRVLRLASCDLNVARCQKLSNALQTNRSLVFLNLSLNNLSNDGVKSLCEVLENPNSSLERLALASCGLTKAGCKVLSSALTKSKRLTHLCLSDNVLEDEGIKLLSHTLKHPQCTLQSLVLRSCSFTPIGSEHLSTALLHNRSLVHLDLGQNKLADNGVKLLCHSLQQPHCNLQELELMSCVLTSKACGDLASVLVNNSNLWSLDLGHNILDDAGLNILCDALRNPNCHVQRLGLENCGLTPGCCQDLLGILSNNKSVIQMNLMKNALDHESIKNLCKVLRSPTCKMEFLALDKKEILKKKIKKFLVDVRINNPHLVIGPECPNTESGCWWNYF

Entity 6 Entity 6 polymer

Description description	Oocyte-expressed protein homolog
Molecular weight formula_weight	18481.3 kDa
Source method src_method	nat
Copy count entity_count	2

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	K,L

MASHTADADAKPDSDSQKLLNVLPVSLRLRTRPWWFPIQEVSNPLVLYMEAWVAERVIGTDQAEISEIEWMCQALLTVDSVNSGNLAEITIFGQPSAQTRMKNILLNMAAWHKENELQRAVKVKEVEEFLKIRASSILSKLSKKGLKLAGFPLPLEGRETQMES

Entity 7 Entity 7 polymer

Description description	Inactive protein-arginine deiminase type-6
Molecular weight formula_weight	76854.1 kDa
Source method src_method	nat
Copy count entity_count	10

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	M,N,O,P,Q,R,S,T,U,V

MSFQNSLSLSLVNPTHALCMVGMEITLDISKCAPDKCKSFTIRGSPRILIHISSSVIAGKEDTVVWRSMNHPTVALVRMVAPSPTVDEDKVLVSYFCPDQEVPTATAVLFLTGIEISLEADIYRDGQLDMPSDKQAKKKWMWGMNGWGAILLVNCSPNAVGQPDEQSFQEGPREIQNLSQMNVTVEGPTSILQNYQLILHTSEEEAKKTRVYWSQRGSSAYELVVGPNKPVYLLPTFENRRKEAFYVEATEFPSPSFSGLISLSLSLVEKAHDECIPEIPLYKDTVMFRVAPYIFMPSTQMPLEVYLCRELQLQGFVDSVTKLSEKSKVQVVKVYEDPNRQSKWLQDEMAFCYTQAPHKTVSLILDTPRVSKLEDFPMKYTLTPGSGYLIRQTEDHRVASLDSIGNLMVSPPVKAQGKDYPLGRVLIGGSFYPSSEGRDMNKGLREFVYAQQVQAPVELFSDWLMTGHMDQFMCFVPTNDKNNDQKDFRLLLASPSACFELFEQKQKEGYGNVTLFEDIGAEQLLSNGRESKTISQILADKSFREQNTYVEKCISLNRTLLKTELGLEDKDIILIPQLFCLEQLTNVPSNQQSTKLFARPYFPDMLQIIVLGKNLGIPKPFGPKINGTCCLEEKVCGLLEPLGLKCTFIDDFDCYLANIGDVCASAIINRVPFAFKWWKMTP

Entity 8 Entity 8 polymer

Description description	Transducin-like enhancer protein 6
Molecular weight formula_weight	65187.3 kDa
Source method src_method	nat
Copy count entity_count	2

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	W,Y

MTSHRQSSDTFGGILPSTLSSRYLSIVNQLPEEFSSVVSEMMVHLENIFSLAENFFQAIERFSRTPDLLERNKMSIGVGAEGDSWPCHVSHEAPMGSAQTTENSAKEEDKQVPESAALQHPKFKSTPGPQLPTRRRFLSESDELQDPQPVWDAEPQFCQGFLIQGLWELFMDSRQKNQQEHGGEDSSQESKDSGLCDFKPEPQPRHRNSLSDSADPFLIKSPSALLDYYQEDVSRPQPETQESSGRADKFLKPLSWGSEVLESSCNQPSTALWQLERFTVPQALQKVRVLKHQELLLVVAVSSFTRHVFTCSQSGIKVWNLVNQVAEDRDPESHLKCSVQDNKVYLRTCLLSSNSRTLFAGGYNLPGVIVWDLAAPSLYEKCQLPCEGLSCQALANTKENMALAGFTDGTVRIWDLRTQEIVRNLKGPTNSARNLVVKDDNIWTGGLDACLRCWDLRMAKVSLEHLFQSQIMSLAHSPTEDWLLLGLANGQHCLFNSRKRDQVLTVDTKDNTILGLKFSPNGKWWASVGMGNFITVHSMPTGAKLFQVPEVGPVRCFDMTENGRLIITGSRDCASVYHIKY

Entity 9 Entity 9 polymer

Description description	Tubulin alpha-1A chain
Molecular weight formula_weight	50188.4 kDa
EC 编号 ec_number	3.6.5.-
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	a

MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVEGEGEEEGEEY

Entity 10 Entity 10 polymer

Description description	Tubulin beta-4B chain
Molecular weight formula_weight	49877.8 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	b

MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFEEEAEEEVA

Entity 11 Entity 11 polymer

Description description	Ubiquitin-conjugating enzyme E2 D3
Molecular weight formula_weight	16706.1 kDa
EC 编号 ec_number	2.3.2.23,2.3.2.24
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	c

MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM

Entity 12 Entity 12 polymer

Description description	E3 ubiquitin-protein ligase UHRF1
Molecular weight formula_weight	88436.8 kDa
EC 编号 ec_number	2.3.2.27
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	d

MWIQVRTMDGKETHTVNSLSRLTKVQELRKKIEEVFHVEPQLQRLFYRGKQMEDGHTLFDYDVRLNDTIQLLVRQSLALPLSTKERDSELSDSDSGYGVGHSESDKSSTHGEGAAEADDKTVWEDTDLGLYKVNEYVDVRDNIFGAWFEAQVVQVQKRALSEDEPCSSSAVKTSEDDIMYHVKYDDYPEHGVDIVKAKNVRARARTVIPWENLEVGQVVMANYNVDYPRKRGFWYDVEICRKRQTRTARELYGNIRLLNDSQLNNCRIMFVDEVLMIELPKERRPLIASPSQPPPALRNTGKSGPSCRFCKDDENKPCRKCACHVCGGREAPEKQLLCDECDMAFHLYCLKPPLTSVPPEPEWYCPSCRTDSSEVVQAGEKLKESKKKAKMASATSSSRRDWGKGMACVGRTTECTIVPANHFGPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDNGNYFTYTGSGGRDLSGNKRTAGQSSDQKLTNNNRALALNCHSPINEKGAEAEDWRQGKPVRVVRNMKGGKHSKYAPAEGNRYDGIYKVVKYWPERGKSGFLVWRYLLRRDDTEPEPWTREGKDRTRQLGLTMQYPEGYLEALANKEKSRKRPAKALEQGPSSSKTGKSKQKSTGPTLSSPRASKKSKLEPYTLSEQQANLIKEDKGNAKLWDDVLTSLQDGPYQIFLSKVKEAFQCICCQELVFRPVTTVCQHNVCKDCLDRSFRAQVFSCPACRFELDHSSPTRVNQPLQTILNQLFPGYGSGR

Entity 13 Entity 13 polymer

Description description	Zinc finger BED domain-containing protein 3
Molecular weight formula_weight	25643.4 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	e

MKSKKPLKITMEDSRRLNDPAEQGGLCPAPVGPSYSEAWGYFHLDPAQPRHRMMSAWATCRLCGLQVGGLPNFQMWTRALCQHLSDVHLPELKKSAAPSSPTTMPCPPPPSPTMAAEGDWARLLEQMGELAMRGSQRELELERREAALMQAELELERKRQALKQEAQSVEQERHQLQVEREALSKWIKKQSPGAQVPEPPSPLPLLPKEDPDIHDNNSDNDMVTKVLL

▶

Unit-cell length a length_a	1.000 Å
Unit-cell length b length_b	1.000 Å
Unit-cell length c length_c	1.000 Å
Unit-cell angle α angle_alpha	90.00 °
Unit-cell angle β angle_beta	90.00 °
Unit-cell angle γ angle_gamma	90.00 °
Molecules per unit cell Z z_pdb	—

Space group space_group	P 1
Space-group number int_tables_number	1
Crystal system crystal_system	triclinic

Resolution resolution	4.20 Å
Resolution测定Method resolution_method	—
颗粒数 num_particles	424595

Native cytoplasmic lattices from mouse oocytes

1. Protein Identity and Related Structures Protein Identity & Related Structures

F-box and WD-40 domain protein 12

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

KH domain-containing protein 3

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

NLR family, pyrin domain containing 4F

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

NACHT, LRR and PYD domains-containing protein 5

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

NACHT, LRR and PYD domains-containing protein 14

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

Oocyte-expressed protein homolog

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

Inactive protein-arginine deiminase type-6

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

Transducin-like enhancer protein 6

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

Tubulin alpha-1A chain

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

Tubulin beta-4B chain

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer