Current Protein Identity:P02550 New Search
Main Difference Dimensions in This Set
Different construct Different mutation/modification Different assembly state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
1FFX TUBULIN:STATHMIN-LIKE DOMAIN COMPLEX Deposited 2000-07-26 Assembly 1 Protein heterocomplex Heteromer;Protein × 5 PDB declaration: pentameric(5) Consistent with protein count
Chain A 1–451(451 aa)
Chain C 1–451(451 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 GDP GUANOSINE-5'-DIPHOSPHATE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;PEG, pH 7.00, VAPOR DIFFUSION, HANGING DROP, temperature 293.K
Resolution 3.95 Å R-free 0.367
1IA0 KIF1A HEAD-MICROTUBULE COMPLEX STRUCTURE IN ATP-FORM Deposited 2001-03-22 Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain A 1–451(451 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 TXL TAXOTERE × 1 MG MAGNESIUM ION × 1 ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1 ELECTRON MICROSCOPY
cryo-EM buffer buf1;pH 7.4;IMIDAZOLE 50 MM, MG-ACETATE 5 MM, EGTA 1 MM, K-ACETATE 50 MM, DTT 10 MM, PACLITAXEL 10 MICRO M
cryo-EM vitrification conditions PLUNGED INTO ETHANE
X-ray crystallization conditions polymerization of the microtubule;pH 6.8;296 K;pH 6.8, polymerization of the microtubule, temperature 296K
Resolution 15.00 Å
1SA0 TUBULIN-COLCHICINE: STATHMIN-LIKE DOMAIN COMPLEX Deposited 2004-02-06 Assembly 1 Protein heterocomplex Heteromer;Protein × 5 PDB declaration: pentameric(5) Consistent with protein count
Chain A 1–451(451 aa)
Chain C 1–451(451 aa)
Not recorded MG MAGNESIUM ION × 3 GTP GUANOSINE-5'-TRIPHOSPHATE × 2 GDP GUANOSINE-5'-DIPHOSPHATE × 2 CN2 2-MERCAPTO-N-[1,2,3,10-TETRAMETHOXY-9-OXO-5,6,7,9-TETRAHYDRO-BENZO[A]HEPTALEN-7-YL]ACETAMIDE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7;291 K;PEG, PIPES BUFFER, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Resolution 3.58 Å R-free 0.249
1SA1 Tubulin-podophyllotoxin: stathmin-like domain complex Deposited 2004-02-06 Assembly 1 Protein heterocomplex Heteromer;Protein × 5 PDB declaration: pentameric(5) Consistent with protein count
Chain A 1–451(451 aa)
Chain C 1–451(451 aa)
Not recorded MG MAGNESIUM ION × 2 GTP GUANOSINE-5'-TRIPHOSPHATE × 2 GDP GUANOSINE-5'-DIPHOSPHATE × 2 POD 9-HYDROXY-5-(3,4,5-TRIMETHOXYPHENYL)-5,8,8A,9-TETRAHYDROFURO[3',4':6,7]NAPHTHO[2,3-D][1,3]DIOXOL-6(5AH)-ONE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7;291 K;PEG, PIPES BUFFER, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Resolution 4.20 Å R-free 0.259
1TUB TUBULIN ALPHA-BETA DIMER, ELECTRON DIFFRACTION Deposited 1997-09-23 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 1–440(440 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 TXL TAXOTERE × 1 ELECTRON CRYSTALLOGRAPHY
X-ray crystallization conditions TWO-DIMENSIONAL SHEETS ARE FORMED UNDER NORMAL POLYMERIZING CONDITIONS WITH THE ADDITION OF 1 MM ZNCL2
Resolution 3.70 Å
1TVK The binding mode of epothilone A on a,b-tubulin by electron crystallography Deposited 2004-06-29 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 1–440(440 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 EP EPOTHILONE A × 1 ELECTRON CRYSTALLOGRAPHY mmCIF provides none of the parsed conditions Resolution 2.89 Å R-free 0.321
2HXF KIF1A head-microtubule complex structure in amppnp-form Deposited 2006-08-03 Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain A 1–451(451 aa)
Not recorded MG MAGNESIUM ION × 2 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 TA1 TAXOL × 1 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1 ELECTRON MICROSCOPY
cryo-EM buffer IMIDAZOLE;pH 7.4;IMIDAZOLE
cryo-EM vitrification conditions Ethan slash
Resolution 10.00 Å
2HXH KIF1A head-microtubule complex structure in adp-form Deposited 2006-08-03 Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain A 1–451(451 aa)
Not recorded MG MAGNESIUM ION × 2 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 TA1 TAXOL × 1 ADP ADENOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer imidazole;pH 7.4;imidazole
cryo-EM vitrification conditions Ethan slash
Resolution 11.00 Å
2WBE Kinesin-5-Tubulin Complex with AMPPNP Deposited 2009-02-26 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 1–451(451 aa)
Not recorded MG MAGNESIUM ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer 80MM PIPES, 150MM NACL, 7MM MGCL2, 1MM EGTA, 1MM BETA-MERCAPTOETHANOL;pH 6.8;80MM PIPES, 150MM NACL, 7MM MGCL2, 1MM EGTA, 1MM BETA-MERCAPTOETHANOL
cryo-EM vitrification conditions ETHANE
Resolution 9.40 Å
3EDL Kinesin13-Microtubule Ring complex Deposited 2008-09-03 Assembly 1 Protein heterocomplex Heteromer;Protein × 165 PDB declaration: 165-meric(165) Consistent with protein count
Chain A 1–451(451 aa)
Chain F 1–451(451 aa)
Not recorded ZN ZINC ION × 33 MG MAGNESIUM ION × 99 GTP GUANOSINE-5'-TRIPHOSPHATE × 66 GDP GUANOSINE-5'-DIPHOSPHATE × 66 TA1 TAXOL × 33 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 33 CN2 2-MERCAPTO-N-[1,2,3,10-TETRAMETHOXY-9-OXO-5,6,7,9-TETRAHYDRO-BENZO[A]HEPTALEN-7-YL]ACETAMIDE × 33 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.8;80 mM Pipes, pH 6.8, 2 mM MgCl2, 1 mM EGTA, 2 mM AMP-PNP, 0.02 mM taxol
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 28.00 Å
3EDL Kinesin13-Microtubule Ring complex Deposited 2008-09-03 Assembly 2 Protein heterocomplex Heteromer;Protein × 5 PDB declaration: pentameric(5) Consistent with protein count
Chain A 1–451(451 aa)
Chain F 1–451(451 aa)
Not recorded ZN ZINC ION × 1 MG MAGNESIUM ION × 3 GTP GUANOSINE-5'-TRIPHOSPHATE × 2 GDP GUANOSINE-5'-DIPHOSPHATE × 2 TA1 TAXOL × 1 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1 CN2 2-MERCAPTO-N-[1,2,3,10-TETRAMETHOXY-9-OXO-5,6,7,9-TETRAHYDRO-BENZO[A]HEPTALEN-7-YL]ACETAMIDE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.8;80 mM Pipes, pH 6.8, 2 mM MgCl2, 1 mM EGTA, 2 mM AMP-PNP, 0.02 mM taxol
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 28.00 Å
3EDL Kinesin13-Microtubule Ring complex Deposited 2008-09-03 Assembly 3 Protein heterocomplex Heteromer;Protein × 5 PDB declaration: pentameric(5) Consistent with protein count
Chain A 1–451(451 aa)
Chain F 1–451(451 aa)
Not recorded ZN ZINC ION × 1 MG MAGNESIUM ION × 3 GTP GUANOSINE-5'-TRIPHOSPHATE × 2 GDP GUANOSINE-5'-DIPHOSPHATE × 2 TA1 TAXOL × 1 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1 CN2 2-MERCAPTO-N-[1,2,3,10-TETRAMETHOXY-9-OXO-5,6,7,9-TETRAHYDRO-BENZO[A]HEPTALEN-7-YL]ACETAMIDE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.8;80 mM Pipes, pH 6.8, 2 mM MgCl2, 1 mM EGTA, 2 mM AMP-PNP, 0.02 mM taxol
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 28.00 Å
3J6E Energy minimized average structure of Microtubules stabilized by GmpCpp Deposited 2014-02-18 Assembly 1 Protein heterocomplex Heteromer;Protein × 18 PDB declaration: octadecameric(18) Consistent with protein count
Chain A 1–439(439 aa)
Chain C 1–439(439 aa)
Chain E 1–439(439 aa)
Chain G 1–439(439 aa)
Chain I 1–439(439 aa)
Chain K 1–439(439 aa)
Chain M 1–439(439 aa)
Chain O 1–439(439 aa)
Chain Q 1–439(439 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 9 MG MAGNESIUM ION × 18 G2P PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER × 9 ELECTRON MICROSCOPY
cryo-EM buffer 80 mM PIPES, 1 mM EGTA, 1 mM MgCl2, 1 mM DTT, 0.05% Nonidet P-40;pH 6.8;80 mM PIPES, 1 mM EGTA, 1 mM MgCl2, 1 mM DTT, 0.05% Nonidet P-40
cryo-EM vitrification conditions The grid was blotted for 2 seconds before plunging.;90.4 K;Cryogen ETHANE;The grid was blotted for 2 seconds before plunging into liquid ethane (FEI VITROBOT MARK II).
Resolution 4.70 Å
3J6F Minimized average structure of GDP-bound dynamic microtubules Deposited 2014-02-19 Assembly 1 Protein heterocomplex Heteromer;Protein × 18 PDB declaration: octadecameric(18) Consistent with protein count
Chain A 1–439(439 aa)
Chain C 1–439(439 aa)
Chain E 1–439(439 aa)
Chain G 1–439(439 aa)
Chain I 1–439(439 aa)
Chain K 1–439(439 aa)
Chain M 1–439(439 aa)
Chain O 1–439(439 aa)
Chain Q 1–439(439 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 9 MG MAGNESIUM ION × 9 GDP GUANOSINE-5'-DIPHOSPHATE × 9 ELECTRON MICROSCOPY
cryo-EM buffer 80 mM PIPES, 1 mM EGTA, 1 mM MgCl2, 1 mM DTT, 0.05% Nonidet P-40;pH 6.8;80 mM PIPES, 1 mM EGTA, 1 mM MgCl2, 1 mM DTT, 0.05% Nonidet P-40
cryo-EM vitrification conditions The grid was blotted for 2 seconds before plunging.;90.4 K;Cryogen ETHANE;The grid was blotted for 2 seconds before plunging into liquid ethane (FEI VITROBOT MARK II).
Resolution 4.90 Å
3J6G Minimized average structure of microtubules stabilized by taxol Deposited 2014-02-19 Assembly 1 Protein heterocomplex Heteromer;Protein × 18 PDB declaration: octadecameric(18) Consistent with protein count
Chain A 1–439(439 aa)
Chain C 1–439(439 aa)
Chain E 1–439(439 aa)
Chain G 1–439(439 aa)
Chain I 1–439(439 aa)
Chain K 1–439(439 aa)
Chain M 1–439(439 aa)
Chain O 1–439(439 aa)
Chain Q 1–439(439 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 9 MG MAGNESIUM ION × 9 GDP GUANOSINE-5'-DIPHOSPHATE × 9 TA1 TAXOL × 9 ELECTRON MICROSCOPY
cryo-EM buffer 80 mM PIPES, 1 mM EGTA, 1 mM MgCl2, 1 mM DTT, 0.05% Nonidet P-40;pH 6.8;80 mM PIPES, 1 mM EGTA, 1 mM MgCl2, 1 mM DTT, 0.05% Nonidet P-40
cryo-EM vitrification conditions The grid was blotted for 2 seconds before plunging.;90.4 K;Cryogen ETHANE;The grid was blotted for 2 seconds before plunging into liquid ethane (FEI VITROBOT MARK II).
Resolution 5.50 Å
3J6H Nucleotide-free Kinesin motor domain complexed with GMPCPP-microtubule Deposited 2014-02-21 Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain A 2–437(436 aa) Fragment:UNP residues 2-437
Not recorded MG MAGNESIUM ION × 2 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 G2P PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER × 1 SO4 SULFATE ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.8
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 8.10 Å
3J6P Pseudo-atomic model of dynein microtubule binding domain-tubulin complex based on a cryoEM map Deposited 2014-03-20 Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain A 1–451(451 aa)
Not recorded MG MAGNESIUM ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 TA1 TAXOL × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7
cryo-EM vitrification conditions Blot for 3.5 seconds before plunging;Cryogen ETHANE
Resolution 8.20 Å
3J7I Structure of alpha- and beta- tubulin in GMPCPP-microtubules Deposited 2014-07-01 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 1–451(451 aa)
Not recorded MG MAGNESIUM ION × 2 GTP GUANOSINE-5'-TRIPHOSPHATE × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.8
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 8.90 Å
5MM4 Ustilago maydis kinesin-5 motor domain in the AMPPNP state bound to microtubules Deposited 2016-12-08 Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain A 1–439(439 aa)
Not recorded MG MAGNESIUM ION × 2 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 TA1 TAXOL × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.8
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.50 Å
5MM7 Ustilago maydis kinesin-5 motor domain with N-terminal extension in the AMPPNP state bound to microtubules Deposited 2016-12-08 Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain A 1–439(439 aa)
Not recorded MG MAGNESIUM ION × 2 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 TA1 TAXOL × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.8
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 5.10 Å
5XXT GDP-microtubule complexed with nucleotide-free KIF5C Deposited 2017-07-05 Assembly 1 Protein heterocomplex Heteromer;Protein × 18 PDB declaration: octadecameric(18) Consistent with protein count
Chain A 2–439(438 aa) Fragment:UNP residues 2-439
Chain C 2–439(438 aa) Fragment:UNP residues 2-439
Chain E 2–439(438 aa) Fragment:UNP residues 2-439
Chain G 2–439(438 aa) Fragment:UNP residues 2-439
Chain I 2–439(438 aa) Fragment:UNP residues 2-439
Chain K 2–439(438 aa) Fragment:UNP residues 2-439
Chain M 2–439(438 aa) Fragment:UNP residues 2-439
Chain O 2–439(438 aa) Fragment:UNP residues 2-439
Chain Q 2–439(438 aa) Fragment:UNP residues 2-439
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 9 MG MAGNESIUM ION × 9 GDP GUANOSINE-5'-DIPHOSPHATE × 9 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 5.35 Å
5XXV GDP-microtubule complexed with KIF5C in AMPPNP state Deposited 2017-07-05 Assembly 1 Protein heterocomplex Heteromer;Protein × 18 PDB declaration: octadecameric(18) Consistent with protein count
Chain A 2–439(438 aa) Fragment:UNP residues 2-439
Chain C 2–439(438 aa) Fragment:UNP residues 2-439
Chain E 2–439(438 aa) Fragment:UNP residues 2-439
Chain G 2–439(438 aa) Fragment:UNP residues 2-439
Chain I 2–439(438 aa) Fragment:UNP residues 2-439
Chain K 2–439(438 aa) Fragment:UNP residues 2-439
Chain M 2–439(438 aa) Fragment:UNP residues 2-439
Chain O 2–439(438 aa) Fragment:UNP residues 2-439
Chain Q 2–439(438 aa) Fragment:UNP residues 2-439
Not recorded MG MAGNESIUM ION × 9 GTP GUANOSINE-5'-TRIPHOSPHATE × 9 GDP GUANOSINE-5'-DIPHOSPHATE × 9 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 6.46 Å
5XXW GDP-microtubule complexed with KIF5C in ATP state Deposited 2017-07-05 Assembly 1 Protein heterocomplex Heteromer;Protein × 18 PDB declaration: octadecameric(18) Consistent with protein count
Chain A 2–439(438 aa) Fragment:UNP residues 2-439
Chain C 2–439(438 aa) Fragment:UNP residues 2-439
Chain E 2–439(438 aa) Fragment:UNP residues 2-439
Chain G 2–439(438 aa) Fragment:UNP residues 2-439
Chain I 2–439(438 aa) Fragment:UNP residues 2-439
Chain K 2–439(438 aa) Fragment:UNP residues 2-439
Chain M 2–439(438 aa) Fragment:UNP residues 2-439
Chain O 2–439(438 aa) Fragment:UNP residues 2-439
Chain Q 2–439(438 aa) Fragment:UNP residues 2-439
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 9 MG MAGNESIUM ION × 9 GDP GUANOSINE-5'-DIPHOSPHATE × 9 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 6.00 Å
5XXX GMPCPP-microtubule complexed with nucleotide-free KIF5C Deposited 2017-07-05 Assembly 1 Protein heterocomplex Heteromer;Protein × 18 PDB declaration: octadecameric(18) Consistent with protein count
Chain A 2–439(438 aa) Fragment:UNP residues 2-439
Chain C 2–439(438 aa) Fragment:UNP residues 2-439
Chain E 2–439(438 aa) Fragment:UNP residues 2-439
Chain G 2–439(438 aa) Fragment:UNP residues 2-439
Chain I 2–439(438 aa) Fragment:UNP residues 2-439
Chain K 2–439(438 aa) Fragment:UNP residues 2-439
Chain M 2–439(438 aa) Fragment:UNP residues 2-439
Chain O 2–439(438 aa) Fragment:UNP residues 2-439
Chain Q 2–439(438 aa) Fragment:UNP residues 2-439
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 9 MG MAGNESIUM ION × 18 G2P PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER × 9 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 6.43 Å
6MLQ Cryo-EM structure of microtubule-bound Kif7 in the ADP state Deposited 2018-09-27 Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain A 1–451(451 aa)
Not recorded MG MAGNESIUM ION × 2 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 TA1 TAXOL × 1 ADP ADENOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.8
cryo-EM vitrification conditions Cryogen ETHANE;Blotted from behind the grid for 2 seconds
Resolution 4.20 Å
6MLR Cryo-EM structure of microtubule-bound Kif7 in the AMPPNP state Deposited 2018-09-27 Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain A 1–451(451 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 TA1 TAXOL × 1 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.8
cryo-EM vitrification conditions Cryogen ETHANE;Blotted from behind the grid for 2 seconds
Resolution 4.20 Å
6MZE Structural Basis of Tubulin Recruitment and Assembly by Microtubule Polymerases with Tumor Overexpressed Gene (TOG) Domain Arrays Deposited 2018-11-05 Assembly 1 Protein heterocomplex Heteromer;Protein × 14 PDB declaration: tetradecameric(14) Consistent with protein count
Chain A 1–451(451 aa)
Chain C 1–451(451 aa)
Chain H 1–451(451 aa)
Chain J 1–451(451 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 4 MG MAGNESIUM ION × 8 GDP GUANOSINE-5'-DIPHOSPHATE × 4 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;50 mM PIPES, 100 mM MgCl2 [pH 7.0], and 10-15% PEG-8000
Resolution 3.60 Å R-free 0.245
6MZE Structural Basis of Tubulin Recruitment and Assembly by Microtubule Polymerases with Tumor Overexpressed Gene (TOG) Domain Arrays Deposited 2018-11-05 Assembly 2 Protein heterocomplex Heteromer;Protein × 14 PDB declaration: tetradecameric(14) Consistent with protein count
Chain O 1–451(451 aa)
Chain Q 1–451(451 aa)
Chain V 1–451(451 aa)
Chain X 1–451(451 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 4 MG MAGNESIUM ION × 8 GDP GUANOSINE-5'-DIPHOSPHATE × 4 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;50 mM PIPES, 100 mM MgCl2 [pH 7.0], and 10-15% PEG-8000
Resolution 3.60 Å R-free 0.245
6MZF Structural Basis of Tubulin Recruitment and Assembly by Microtubule Polymerases with Tumor Overexpressed Gene (TOG) Domain Arrays Deposited 2018-11-05 Assembly 1 Protein heterocomplex Heteromer;Protein × 14 PDB declaration: tetradecameric(14) Consistent with protein count
Chain A 1–451(451 aa)
Chain C 1–451(451 aa)
Chain H 1–451(451 aa)
Chain J 1–451(451 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 4 MG MAGNESIUM ION × 8 GDP GUANOSINE-5'-DIPHOSPHATE × 4 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;50 mM PIPES, 100 mM MgCl2 [pH 7.0], and 10-15% PEG-8000
Resolution 4.40 Å R-free 0.252
6MZF Structural Basis of Tubulin Recruitment and Assembly by Microtubule Polymerases with Tumor Overexpressed Gene (TOG) Domain Arrays Deposited 2018-11-05 Assembly 2 Protein heterocomplex Heteromer;Protein × 14 PDB declaration: tetradecameric(14) Consistent with protein count
Chain O 1–451(451 aa)
Chain Q 1–451(451 aa)
Chain V 1–451(451 aa)
Chain X 1–451(451 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 4 MG MAGNESIUM ION × 8 GDP GUANOSINE-5'-DIPHOSPHATE × 4 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;50 mM PIPES, 100 mM MgCl2 [pH 7.0], and 10-15% PEG-8000
Resolution 4.40 Å R-free 0.252
6MZG Structural Basis of Tubulin Recruitment and Assembly by Microtubule Polymerases with Tumor Overexpressed Gene (TOG) Domain Arrays Deposited 2018-11-05 Assembly 1 Protein heterocomplex Heteromer;Protein × 6 PDB declaration: hexameric(6) Consistent with protein count
Chain A 1–451(451 aa)
Chain C 1–451(451 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 4 GDP GUANOSINE-5'-DIPHOSPHATE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;50 mM PIPES, 100 mM MgCl2 [pH 7.0], and 10-15% PEG-8000
Resolution 3.21 Å R-free 0.234
6MZG Structural Basis of Tubulin Recruitment and Assembly by Microtubule Polymerases with Tumor Overexpressed Gene (TOG) Domain Arrays Deposited 2018-11-05 Assembly 2 Protein heterocomplex Heteromer;Protein × 6 PDB declaration: hexameric(6) Consistent with protein count
Chain G 1–451(451 aa)
Chain I 1–451(451 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 4 GDP GUANOSINE-5'-DIPHOSPHATE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;50 mM PIPES, 100 mM MgCl2 [pH 7.0], and 10-15% PEG-8000
Resolution 3.21 Å R-free 0.234
6VPO Cryo-EM structure of microtubule-bound KLP61F motor domain in the AMPPNP state Deposited 2020-02-04 Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain A 1–451(451 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.8
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.40 Å
6VPP Cryo-EM structure of microtubule-bound KLP61F motor with tail domain in the nucleotide-free state Deposited 2020-02-04 Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain A 1–451(451 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.8
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.40 Å
7RS5 Cryo-EM structure of Kip3 (AMPPNP) bound to Taxol-Stabilized Microtubules Deposited 2021-08-10 Assembly 1 Protein heterocomplex Heteromer;Protein × 27 PDB declaration: 27-meric(27) Consistent with protein count
Chain A 1–451(451 aa)
Chain C 1–451(451 aa)
Chain E 1–451(451 aa)
Chain G 1–451(451 aa)
Chain I 1–451(451 aa)
Chain L 1–451(451 aa)
Chain N 1–451(451 aa)
Chain P 1–451(451 aa)
Chain R 1–451(451 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 9 MG MAGNESIUM ION × 18 GDP GUANOSINE-5'-DIPHOSPHATE × 9 TA1 TAXOL × 9 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 9 ELECTRON MICROSCOPY
cryo-EM buffer pH 8;cryoEM buffer (50 mM Tris-HCl, pH 8.0, 1 mM MgCl2, 1 mM EGTA, 1 mM DTT supplemented with 2mM AMPPNP)
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.90 Å
7RX0 Complex of AMPPNP-Kif7 and Gli2 Zinc-Finger domain bound to microtubules Deposited 2021-08-20 Assembly 1 Protein heterocomplex Heteromer;Protein × 4 PDB declaration: tetrameric(4) Consistent with protein count
Chain A 1–451(451 aa)
Not recorded ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 G2P PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.8
cryo-EM vitrification conditions Cryogen ETHANE;Blotted from behind the grid for 2 seconds
Resolution 3.89 Å
7U0F HIV-1 Rev in complex with tubulin Deposited 2022-02-18 Assembly 1 Protein heterocomplex Heteromer;Protein × 150 PDB declaration: 150-meric(150) Consistent with protein count
Chain A 1–451(451 aa)
Chain C 1–451(451 aa)
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.53 Å
7U0F HIV-1 Rev in complex with tubulin Deposited 2022-02-18 Assembly 2 Protein heterocomplex Heteromer;Protein × 10 PDB declaration: decameric(10) Consistent with protein count
Chain A 1–451(451 aa)
Chain C 1–451(451 aa)
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.53 Å
7U0F HIV-1 Rev in complex with tubulin Deposited 2022-02-18 Assembly 3 Protein heterocomplex Heteromer;Protein × 10 PDB declaration: decameric(10) Consistent with protein count
Chain A 1–451(451 aa)
Chain C 1–451(451 aa)
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.53 Å
7X4N Crystal Structure of C. elegans kinesin-4 KLP-12 complexed with tubulin and DARPin Deposited 2022-03-03 Assembly 1 Protein heterocomplex Heteromer;Protein × 4 PDB declaration: tetrameric(4) Consistent with protein count
Chain A 1–451(451 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 2 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;ammonium acetate, HEPES, polyethylene glycol (PEG) 3350
Resolution 2.88 Å R-free 0.296
8QAU Outer kinetochore Ndc80-Dam1 alpha/beta-tubulin complex Deposited 2023-08-23 Assembly 1 Protein heterocomplex Heteromer;Protein × 5 PDB declaration: pentameric(5) Consistent with protein count
Chain C 1–451(451 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 TA1 TAXOL × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.8
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.54 Å
9EDR Tubulin Cofactors D,E,G,C and Tubulin complex -- TBCC N Terminus Bound to Tubulin Deposited 2024-11-17 Assembly 1 Protein heterocomplex Heteromer;Protein × 7 PDB declaration: heptameric(7) Consistent with protein count
Chain A 1–451(451 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.80 Å
9EDS Tubulin cofactors D,E,G,C bound to tubulin dimer -- TBCC N terminus unbound Deposited 2024-11-18 Assembly 1 Protein heterocomplex Heteromer;Protein × 7 PDB declaration: heptameric(7) Consistent with protein count
Chain A 1–451(451 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.80 Å
9EDT Tubulin cofactors D,E,G bound to tubulin dimer Deposited 2024-11-18 Assembly 1 Protein heterocomplex Heteromer;Protein × 6 PDB declaration: hexameric(6) Consistent with protein count
Chain A 1–451(451 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.70 Å
9EEB Tubulin cofactors D,E,G bound to tubulin dimer Deposited 2024-11-18 Assembly 1 Protein heterocomplex Heteromer;Protein × 6 PDB declaration: hexameric(6) Consistent with protein count
Chain A 1–451(451 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 2 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.70 Å
9RPD D. melanogaster Augmin TII N-clamp (GST-fusion) bound to a microtubule, well-defined subset of particles Deposited 2025-06-24 Assembly 1 Insufficient information Heteromer;Protein × 9 PDB declaration: nonameric(9) Consistent with protein count
Chain A 1–451(451 aa)
Chain C 1–451(451 aa)
Chain E 1–451(451 aa)
Chain G 1–451(451 aa)
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 6.8
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.90 Å
9T1D Cryo-EM reconstruction of undecorated GDP microtubule Deposited 2025-10-21 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 1–439(439 aa)
Not recorded GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 6.8
cryo-EM vitrification conditions Cryogen ETHANE-PROPANE
Resolution 2.90 Å