|
11UC
Crystal structure of Casein Kinase 2 (CK2) alpha in complex with BMS-595
提交 2026-03-13
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
未记录非水小分子
|
X-RAY DIFFRACTION
mmCIF 未提供已读取条件
|
分辨率 1.96 Å
R-free 0.215
|
|
1JWH
Crystal Structure of Human Protein Kinase CK2 Holoenzyme
提交 2001-09-04
|
构建体不同
突变/修饰不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 4
PDB 声明:tetrameric
|
链 A
1–337(337 aa)
链 B
1–337(337 aa)
|
未记录
|
PO4 PHOSPHATE ION × 7
ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1
ZN ZINC ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 9.3;285 K;initial composition of the drop: 3 ul rhCK2 stock solution [5 mg/ml enzyme in 25 mM Tris/HCl, 300 mM NaCl, 1 mM dithiothreitole, pH 8.5], 1.5 ul reservoir solution [20 % (w/v) PEG3350, 200 mM dipotassium hydrogenphosphate], 3 ul 1 mM adenylyl imidodiphosphate (AMPPNP), 3 ul 2 mM magnesium chloride, 2 ul 10 % (w/v) polyethylene glycol 400 dodecylether (Thesit), pH 9.3, VAPOR DIFFUSION, SITTING DROP, temperature 285K
|
分辨率 3.10 Å
R-free 0.338
|
|
1NA7
Crystal structure of the catalytic subunit of human protein kinase CK2
提交 2002-11-27
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–329(329 aa)
片段:Catalytic subunit
|
突变:E27A, K76N
|
未记录非水小分子
|
X-RAY DIFFRACTION
X-ray结晶条件
LB Modified hanging drop method;pH 8;293 K;PEG 3500, NaAC, Tris, pH 8, LB Modified hanging drop method, temperature 293K
|
分辨率 2.40 Å
R-free 0.273
|
|
1PJK
Crystal Structure of a C-terminal deletion mutant of human protein kinase CK2 catalytic subunit
提交 2003-06-03
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–335(334 aa)
片段:residue 2-335
|
未记录
|
CL CHLORIDE ION × 1
ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;293 K;PEGmme 5000, ammonium sulfate, MES, adenylyl imidodiphosphate, magnesium chloride, peptide RRRADDSDDDDD, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 2.50 Å
R-free 0.257
|
|
2PVR
Crystal structure of the catalytic subunit of protein kinase CK2 (C-terminal deletion mutant 1-335) in complex with two sulfate ions
提交 2007-05-10
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–335(334 aa)
片段:catalytic domain, residues 1-335
|
未记录
|
SO4 SULFATE ION × 2
ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;293 K;PEGmme 5000, ammonium sulfate, MES, adenylyl imidodiphosphate, magnesium chloride, peptide RRRADDSDDDDD, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 1.60 Å
R-free 0.241
|
|
2ZJW
Crystal structure of human CK2 alpha complexed with Ellagic acid
提交 2008-03-11
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
片段:Protein kinase domain, UNP residues 1-335
|
未记录
|
REF 2,3,7,8-tetrahydroxychromeno[5,4,3-cde]chromene-5,10-dione × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;277 K;25% ethylene glycol, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
|
分辨率 2.40 Å
R-free 0.274
|
|
3AMY
Crystal structure of human CK2 alpha complexed with apigenin
提交 2010-08-25
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
片段:PROTEIN KINASE DOMAIN, RESIDUES 1-335
|
未记录
|
AGI 5,7-dihydroxy-2-(4-hydroxyphenyl)-4H-chromen-4-one × 1
EDO 1,2-ETHANEDIOL × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;295 K;25% ethylene glycol, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K
|
分辨率 2.30 Å
R-free 0.340
|
|
3AT2
Crystal structure of CK2alpha
提交 2010-12-23
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
片段:residues 1-335
|
未记录
|
EDO 1,2-ETHANEDIOL × 11
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8;277 K;25% ethyleneglycol, pH 8, VAPOR DIFFUSION, SITTING DROP, temperature 277K
|
分辨率 1.60 Å
R-free 0.197
|
|
3AT3
Crystal structure of CK2alpha with pyradine derivative
提交 2010-12-23
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
片段:residues 1-335
|
未记录
|
ATK (1-{6-[6-(cyclopentylamino)-1H-indazol-1-yl]pyrazin-2-yl}-1H-pyrrol-3-yl)acetic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8;277 K;25% ethyleneglycol, pH 8, VAPOR DIFFUSION, SITTING DROP, temperature 277K
|
分辨率 2.60 Å
R-free 0.263
|
|
3AT4
Crystal structure of CK2alpha with pyradine derivertive
提交 2010-12-23
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
片段:residues 1-335
|
未记录
|
CCK [1-(6-{6-[(1-methylethyl)amino]-1H-indazol-1-yl}pyrazin-2-yl)-1H-pyrrol-3-yl]acetic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8;277 K;25% ethyleneglycol, pH 8, VAPOR DIFFUSION, SITTING DROP, temperature 277K
|
分辨率 2.20 Å
R-free 0.251
|
|
3AXW
Crystal structure of human CK2alpha complexed with a potent inhibitor
提交 2011-04-18
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
片段:RESIDUES 1-335
|
未记录
|
TID 4-(5-amino-1,3,4-thiadiazol-2-yl)benzoic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8;277 K;25% ethylene glycol, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K
|
分辨率 2.50 Å
R-free 0.295
|
|
3BQC
High pH-value crystal structure of emodin in complex with the catalytic subunit of protein kinase CK2
提交 2007-12-20
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
片段:residues 1-335
|
未记录
|
CL CHLORIDE ION × 2
EMO 3-METHYL-1,6,8-TRIHYDROXYANTHRAQUINONE × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;Protein stock solution: 10mg/ml protein in 500mM NaCl, 25mM Tris/HCl, pH 8.5
Emodin stock solution: 10mM in water
Protein/emodin mixture: equal volumes of protein and emodin stock solutions were mixed and equillibrated for 30 min prior to crystallization
Reservoir: 30% PEG4000, 0.2M lithium sulfate, 0.1M Tris/HCl, pH 8.5
Crystallization drop: 2 mikroliters protein/emodin mixture plus 1 mikroliter reservoir solution, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 1.50 Å
R-free 0.197
|
|
3C13
Low pH-value crystal structure of emodin in complex with the catalytic subunit of protein kinase CK2
提交 2008-01-22
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
片段:RESIDUES 1-335
|
未记录
|
CL CHLORIDE ION × 2
EMO 3-METHYL-1,6,8-TRIHYDROXYANTHRAQUINONE × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.6;293 K;Protein stock solution: 10mg/ml protein in 500mM NaCl, 25mM Tris/HCl, pH 8.5
Emodin stock solution: 10mM in water
Protein/emodin mixture: equal volumes of protein and emodin stock solutions were mixed and equillibrated for 30 min prior to crystallization
Reservoir: 30% PEG4000, 0.2M ammonium acetate, 0.1M sodium citrate, pH 5.6
Crystallization drop: 2 microliters protein/emodin mixture plus 1 microliter reservoir solution, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 1.95 Å
R-free 0.233
|
|
3FWQ
Inactive conformation of human protein kinase CK2 catalytic subunit
提交 2009-01-19
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
突变:residues 1-335
|
GOL GLYCEROL × 2
SO4 SULFATE ION × 1
CL CHLORIDE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;Protein stock solution: 10mg/ml CK2alpha, 500mM sodium chloride, 25mM Tris/HCl, pH 8.5;
Reservoir: 2M ammonium sulfate, 2M sodium chloride;
Drop: 0.001mL reservoir solution, 0.001mL protein stock solution, 0.003mL 1mM AMPPNP, 0.0006mL 10mM magnesium chloride, 0.0001mL glycerol, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 2.30 Å
R-free 0.233
|
|
3FWQ
Inactive conformation of human protein kinase CK2 catalytic subunit
提交 2009-01-19
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–335(335 aa)
|
突变:residues 1-335
|
GOL GLYCEROL × 1
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;Protein stock solution: 10mg/ml CK2alpha, 500mM sodium chloride, 25mM Tris/HCl, pH 8.5;
Reservoir: 2M ammonium sulfate, 2M sodium chloride;
Drop: 0.001mL reservoir solution, 0.001mL protein stock solution, 0.003mL 1mM AMPPNP, 0.0006mL 10mM magnesium chloride, 0.0001mL glycerol, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 2.30 Å
R-free 0.233
|
|
3H30
Crystal structure of the catalytic subunit of human protein kinase CK2 with 5,6-dichloro-1-beta-D-ribofuranosylbenzimidazole
提交 2009-04-15
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–334(334 aa)
片段:catalytic subunit, residues 1-334
|
未记录
|
RFZ 5,6-dichloro-1-beta-D-ribofuranosyl-1H-benzimidazole × 2
CL CHLORIDE ION × 14
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;1.5M ammonium sulfate, 0.2M tri-sodium citrate, 0.2M K/Na tartrate pH 5.6, the enzyme was preincubated with 5,6-dichloro-1-beta-D-ribofuranosylbenzimidazole, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 1.56 Å
R-free 0.198
|
|
3H30
Crystal structure of the catalytic subunit of human protein kinase CK2 with 5,6-dichloro-1-beta-D-ribofuranosylbenzimidazole
提交 2009-04-15
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–334(334 aa)
片段:catalytic subunit, residues 1-334
|
未记录
|
RFZ 5,6-dichloro-1-beta-D-ribofuranosyl-1H-benzimidazole × 1
CL CHLORIDE ION × 18
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;1.5M ammonium sulfate, 0.2M tri-sodium citrate, 0.2M K/Na tartrate pH 5.6, the enzyme was preincubated with 5,6-dichloro-1-beta-D-ribofuranosylbenzimidazole, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 1.56 Å
R-free 0.198
|
|
3H30
Crystal structure of the catalytic subunit of human protein kinase CK2 with 5,6-dichloro-1-beta-D-ribofuranosylbenzimidazole
提交 2009-04-15
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 3
蛋白同源多聚体
同源多聚体;蛋白 × 2
PDB 声明:dimeric
|
链 A
1–334(334 aa)
片段:catalytic subunit, residues 1-334
链 B
1–334(334 aa)
片段:catalytic subunit, residues 1-334
|
未记录
|
RFZ 5,6-dichloro-1-beta-D-ribofuranosyl-1H-benzimidazole × 3
CL CHLORIDE ION × 32
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;1.5M ammonium sulfate, 0.2M tri-sodium citrate, 0.2M K/Na tartrate pH 5.6, the enzyme was preincubated with 5,6-dichloro-1-beta-D-ribofuranosylbenzimidazole, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 1.56 Å
R-free 0.198
|
|
3JUH
Crystal structure of a mutant of human protein kinase CK2alpha with altered cosubstrate specificity
提交 2009-09-15
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
片段:residues 1-335
|
突变:V66A, M163L
|
CL CHLORIDE ION × 3
ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;2.2M sodium citrate, 2mM AMPPNP, 4mM magnesium chloride, 0.62mM peptide RRRADDSDDDDD, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 1.66 Å
R-free 0.218
|
|
3JUH
Crystal structure of a mutant of human protein kinase CK2alpha with altered cosubstrate specificity
提交 2009-09-15
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–335(335 aa)
片段:residues 1-335
|
突变:V66A, M163L
|
CL CHLORIDE ION × 3
ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;2.2M sodium citrate, 2mM AMPPNP, 4mM magnesium chloride, 0.62mM peptide RRRADDSDDDDD, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 1.66 Å
R-free 0.218
|
|
3MB6
Human CK2 catalytic domain in complex with a difurane derivative inhibitor (CPA)
提交 2010-03-25
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–331(331 aa)
片段:UNP residues 1-331
|
未记录
|
01I naphtho[2,1-b:7,6-b']difuran-2,8-dicarboxylic acid × 1
SO4 SULFATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7.5;293 K;36 % polyethylene glycol 5000 monomethyl ether, 150 mM ammonium sulphate and 100 mM Tris-HCl, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 1.75 Å
R-free 0.229
|
|
3MB7
Human CK2 catalytic domain in complex with a difurane derivative inhibitor (AMR)
提交 2010-03-25
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–331(331 aa)
片段:UNP residues 1-331
|
未记录
|
14I naphtho[2,1-b:7,8-b']difuran-2,9-dicarboxylic acid × 1
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7.5;293 K;36 % polyethylene glycol 5000 monomethyl ether, 150 mM ammonium sulphate and 100 mM Tris-HCl, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 1.65 Å
R-free 0.239
|
|
3NGA
Human CK2 catalytic domain in complex with CX-4945
提交 2010-06-11
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–333(333 aa)
片段:UNP residues 1-333
|
未记录
|
3NG 5-[(3-chlorophenyl)amino]benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
SO4 SULFATE ION × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6;293 K;20-26% PEG 4000, 0.2 M ammonium sulfate, 0.1 M sodium citrate pH 6, 1 mM MgCl2 and 10 mM AMPPNP, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.71 Å
R-free 0.218
|
|
3NGA
Human CK2 catalytic domain in complex with CX-4945
提交 2010-06-11
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–333(333 aa)
片段:UNP residues 1-333
|
未记录
|
3NG 5-[(3-chlorophenyl)amino]benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
SO4 SULFATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6;293 K;20-26% PEG 4000, 0.2 M ammonium sulfate, 0.1 M sodium citrate pH 6, 1 mM MgCl2 and 10 mM AMPPNP, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.71 Å
R-free 0.218
|
|
3NSZ
Human CK2 catalytic domain in complex with AMPPN
提交 2010-07-02
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–331(330 aa)
片段:UNP residues 2-331
|
未记录
|
GOL GLYCEROL × 1
SO4 SULFATE ION × 2
MG MAGNESIUM ION × 2
ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6;293 K;20-26% PEG 4000, 0.2 M AMMONIUM SULFATE, 0.1 M SODIUM CITRATE PH 6, 1 MM MGCL2 AND 10 MM AMPPNP, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 1.30 Å
R-free 0.187
|
|
3PE1
Crystal structure of human protein kinase CK2 alpha subunit in complex with the inhibitor CX-4945
提交 2010-10-25
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
片段:unp residues 1-337
|
未记录
|
3NG 5-[(3-chlorophenyl)amino]benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
SO4 SULFATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;32% PEG 4000, 0.2M Li2SO4, 0.1M Tris, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 1.60 Å
R-free 0.203
|
|
3PE2
Crystal structure of human protein kinase CK2 in complex with the inhibitor CX-5011
提交 2010-10-25
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
片段:unp residues 1-337
|
未记录
|
E1B 5-[(3-ethynylphenyl)amino]pyrimido[4,5-c]quinoline-8-carboxylic acid × 1
SO4 SULFATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;32% PEG 4000, 0.2M Li2SO4, 0.1M Tris pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 1.90 Å
R-free 0.222
|
|
3PE4
Structure of human O-GlcNAc transferase and its complex with a peptide substrate
提交 2010-10-25
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 B
340–352(13 aa)
片段:UNP residues 340-352
|
未记录
|
UDP URIDINE-5'-DIPHOSPHATE × 1
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;298 K;1.6M Lithium Sulfate, 0.1M Bis Tris Propane pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 1.95 Å
R-free 0.252
|
|
3PE4
Structure of human O-GlcNAc transferase and its complex with a peptide substrate
提交 2010-10-25
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 D
340–352(13 aa)
片段:UNP residues 340-352
|
未记录
|
UDP URIDINE-5'-DIPHOSPHATE × 1
SO4 SULFATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;298 K;1.6M Lithium Sulfate, 0.1M Bis Tris Propane pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 1.95 Å
R-free 0.252
|
|
3PE4
Structure of human O-GlcNAc transferase and its complex with a peptide substrate
提交 2010-10-25
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 3
蛋白异源复合物
异源复合物;蛋白 × 4
PDB 声明:tetrameric
|
链 B
340–352(13 aa)
片段:UNP residues 340-352
|
未记录
|
UDP URIDINE-5'-DIPHOSPHATE × 2
SO4 SULFATE ION × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;298 K;1.6M Lithium Sulfate, 0.1M Bis Tris Propane pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 1.95 Å
R-free 0.252
|
|
3PE4
Structure of human O-GlcNAc transferase and its complex with a peptide substrate
提交 2010-10-25
|
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 4
蛋白异源复合物
异源复合物;蛋白 × 4
PDB 声明:tetrameric
|
链 D
340–352(13 aa)
片段:UNP residues 340-352
|
未记录
|
UDP URIDINE-5'-DIPHOSPHATE × 2
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;298 K;1.6M Lithium Sulfate, 0.1M Bis Tris Propane pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 1.95 Å
R-free 0.252
|
|
3Q04
Crystal structure of the apo-form of human CK2 alpha at pH 8.5
提交 2010-12-15
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
3–330(328 aa)
片段:UNP RESIDUES 3-330
|
未记录
|
SO4 SULFATE ION × 3
EDO 1,2-ETHANEDIOL × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;30% PEG 4000, 0.2M lithium sulfate, 0.1M TrisHCl, pH 8.5, vapor diffusion, sitting drop, temperature 293K
|
分辨率 1.80 Å
R-free 0.216
|
|
3Q9W
Crystal structure of human CK2 alpha in complex with emodin at pH 8.5
提交 2011-01-10
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–336(336 aa)
片段:UNP residues 1-336
|
未记录
|
EMO 3-METHYL-1,6,8-TRIHYDROXYANTHRAQUINONE × 1
SO4 SULFATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;30% PEG 4000, 0.2M lithium sulfate, 0.1M TrisHCl, pH 8.5, vapor diffusion, sitting drop, temperature 293K
|
分辨率 1.70 Å
R-free 0.223
|
|
3Q9X
Crystal structure of human CK2 alpha in complex with emodin at pH 6.5
提交 2011-01-10
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–336(336 aa)
片段:UNP residues 1-336
|
未记录
|
EMO 3-METHYL-1,6,8-TRIHYDROXYANTHRAQUINONE × 1
EDO 1,2-ETHANEDIOL × 1
7PE 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL × 1
SO4 SULFATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;20% PEG 5000 MME, 0.2M ammonium sulfate, 0.1M Mes, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 2.20 Å
R-free 0.243
|
|
3Q9X
Crystal structure of human CK2 alpha in complex with emodin at pH 6.5
提交 2011-01-10
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–336(336 aa)
片段:UNP residues 1-336
|
未记录
|
EMO 3-METHYL-1,6,8-TRIHYDROXYANTHRAQUINONE × 1
EDO 1,2-ETHANEDIOL × 1
SO4 SULFATE ION × 4
PEG DI(HYDROXYETHYL)ETHER × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;20% PEG 5000 MME, 0.2M ammonium sulfate, 0.1M Mes, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 2.20 Å
R-free 0.243
|
|
3Q9Y
Crystal structure of human CK2 alpha in complex with Quinalizarin at pH 8.5
提交 2011-01-10
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–336(336 aa)
片段:UNP residues 1-336
|
未记录
|
TXQ 1,2,5,8-tetrahydroxyanthracene-9,10-dione × 1
SO4 SULFATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;30% PEG 4000, 0.2M lithium sulfate, 0.1M TrisHCl, pH 8.5, vapor diffusion, sitting drop, temperature 293K
|
分辨率 1.80 Å
R-free 0.241
|
|
3Q9Z
Crystal structure of human CK2 alpha in complex with Quinalizarin at pH 6.5
提交 2011-01-10
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–336(336 aa)
片段:UNP residues 1-336
|
未记录
|
SO4 SULFATE ION × 3
TXQ 1,2,5,8-tetrahydroxyanthracene-9,10-dione × 1
EDO 1,2-ETHANEDIOL × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;20% PEG 5000 MME, 0.2M ammonium sulfate, 0.1M Mes pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 2.20 Å
R-free 0.267
|
|
3Q9Z
Crystal structure of human CK2 alpha in complex with Quinalizarin at pH 6.5
提交 2011-01-10
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–336(336 aa)
片段:UNP residues 1-336
|
未记录
|
SO4 SULFATE ION × 3
TXQ 1,2,5,8-tetrahydroxyanthracene-9,10-dione × 1
NA SODIUM ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;20% PEG 5000 MME, 0.2M ammonium sulfate, 0.1M Mes pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 2.20 Å
R-free 0.267
|
|
3QA0
Crystal structure of the apo-form of human CK2 alpha at pH 6.5
提交 2011-01-10
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–336(336 aa)
片段:UNP residues 1-336
|
未记录
|
SO4 SULFATE ION × 3
EDO 1,2-ETHANEDIOL × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;20% PEG 5000 MME, 0.2M ammonium sulfate, 0.1M Mes pH 6.5, vapor diffusion, sitting drop, temperature 293K
|
分辨率 2.50 Å
R-free 0.249
|
|
3QA0
Crystal structure of the apo-form of human CK2 alpha at pH 6.5
提交 2011-01-10
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–336(336 aa)
片段:UNP residues 1-336
|
未记录
|
SO4 SULFATE ION × 4
EDO 1,2-ETHANEDIOL × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;20% PEG 5000 MME, 0.2M ammonium sulfate, 0.1M Mes pH 6.5, vapor diffusion, sitting drop, temperature 293K
|
分辨率 2.50 Å
R-free 0.249
|
|
3R0T
Crystal structure of human protein kinase CK2 alpha subunit in complex with the inhibitor CX-5279
提交 2011-03-09
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
片段:unp residues 1-337
|
未记录
|
FU9 3-(cyclopropylamino)-5-{[3-(trifluoromethyl)phenyl]amino}pyrimido[4,5-c]quinoline-8-carboxylic acid × 1
SO4 SULFATE ION × 4
PEG DI(HYDROXYETHYL)ETHER × 1
EDO 1,2-ETHANEDIOL × 9
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;32% PEG 4000, 0.2M Li2SO4, 0.1M Tris pH 8.5, vapor diffusion, sitting drop, temperature 293K
|
分辨率 1.75 Å
R-free 0.211
|
|
3RPS
Structure of human CK2alpha in complex with the ATP-competitive inhibitor 3-(4,5,6,7-tetrabromo-1H-benzotriazol-1-yl)propan-1-ol
提交 2011-04-27
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
片段:unp residues 1-335
|
未记录
|
4B0 3-(4,5,6,7-tetrabromo-1H-benzotriazol-1-yl)propan-1-ol × 1
SO4 SULFATE ION × 1
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
mmCIF 未提供已读取条件
|
分辨率 2.30 Å
R-free 0.228
|
|
3RPS
Structure of human CK2alpha in complex with the ATP-competitive inhibitor 3-(4,5,6,7-tetrabromo-1H-benzotriazol-1-yl)propan-1-ol
提交 2011-04-27
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–335(335 aa)
片段:unp residues 1-335
|
未记录
|
SO4 SULFATE ION × 1
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
mmCIF 未提供已读取条件
|
分辨率 2.30 Å
R-free 0.228
|
|
3U4U
Casein kinase 2 in complex with AZ-Inhibitor
提交 2011-10-10
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–333(333 aa)
|
未记录
|
LNH 3-{5-(acetylamino)-3-[3-cyano-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidin-5-yl]-1H-indol-1-yl}propanoic acid × 1
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;296 K;22-26% PEG 6K, 200 mM ammonium sulfate, 100 mM MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 296K
|
分辨率 2.20 Å
R-free 0.269
|
|
3U87
Structure of a chimeric construct of human CK2alpha and human CK2alpha' in complex with a non-hydrolysable ATP-analogue
提交 2011-10-16
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
信息不足
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–325(325 aa)
片段:;KINASE II SUBUNIT ALPHA (UNP RESIDUES 1-325), KINASE II SUBUNIT ALPHA' (UNP RESIDUES 327-350)
;
|
未记录
|
ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1
MG MAGNESIUM ION × 2
CL CHLORIDE ION × 1
SO4 SULFATE ION × 1
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.2;293 K;reservoir:
15% polyethylene glycol 8000, 15% glycerol, 0.17 M ammonium sulfate, 0.1 M sodium cacodylate buffer;
drop:
0.8 uL reservoir solution, 0.8 uL protein solution (12.6 mg/ml), 0.5 uL 10% anapoe 305 (detergent), 1.5 uL 5 mM AMPPNP, 1.5 uL 10 mM magnesium chloride, 1.5 uL CK2 substrate peptide (sequence RRRADDSDDDDD), pH 6.2, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 2.90 Å
R-free 0.218
|
|
3U87
Structure of a chimeric construct of human CK2alpha and human CK2alpha' in complex with a non-hydrolysable ATP-analogue
提交 2011-10-16
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
信息不足
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–325(325 aa)
片段:;KINASE II SUBUNIT ALPHA (UNP RESIDUES 1-325), KINASE II SUBUNIT ALPHA' (UNP RESIDUES 327-350)
;
|
未记录
|
ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1
MG MAGNESIUM ION × 2
CL CHLORIDE ION × 1
SO4 SULFATE ION × 1
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.2;293 K;reservoir:
15% polyethylene glycol 8000, 15% glycerol, 0.17 M ammonium sulfate, 0.1 M sodium cacodylate buffer;
drop:
0.8 uL reservoir solution, 0.8 uL protein solution (12.6 mg/ml), 0.5 uL 10% anapoe 305 (detergent), 1.5 uL 5 mM AMPPNP, 1.5 uL 10 mM magnesium chloride, 1.5 uL CK2 substrate peptide (sequence RRRADDSDDDDD), pH 6.2, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 2.90 Å
R-free 0.218
|
|
3U9C
Structure of a C-terminal deletion mutant of human protein kinase CK2 catalytic subunit with the ATP-competitive inhibitor resorufin
提交 2011-10-18
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
SO4 SULFATE ION × 3
04G 7-hydroxy-3H-phenoxazin-3-one × 1
GOL GLYCEROL × 3
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
pH 6.5;293 K;reservoir:
30 % polyethylene glycol 8000, 0.2 M ammonium sulfate, 0.1 M sodium cacodylate buffer;
drop:
2 microliters preincubated CK2alpha/resorufin mixture (5 mM resorufin, 5 mg/ml Ck2alpha), 1 reservoir solution , pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 3.20 Å
R-free 0.231
|
|
3U9C
Structure of a C-terminal deletion mutant of human protein kinase CK2 catalytic subunit with the ATP-competitive inhibitor resorufin
提交 2011-10-18
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–335(335 aa)
|
未记录
|
SO4 SULFATE ION × 4
04G 7-hydroxy-3H-phenoxazin-3-one × 1
GOL GLYCEROL × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
pH 6.5;293 K;reservoir:
30 % polyethylene glycol 8000, 0.2 M ammonium sulfate, 0.1 M sodium cacodylate buffer;
drop:
2 microliters preincubated CK2alpha/resorufin mixture (5 mM resorufin, 5 mg/ml Ck2alpha), 1 reservoir solution , pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 3.20 Å
R-free 0.231
|
|
3U9C
Structure of a C-terminal deletion mutant of human protein kinase CK2 catalytic subunit with the ATP-competitive inhibitor resorufin
提交 2011-10-18
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 3
蛋白同源多聚体
同源多聚体;蛋白 × 2
PDB 声明:dimeric
|
链 A
1–335(335 aa)
链 B
1–335(335 aa)
|
未记录
|
SO4 SULFATE ION × 7
04G 7-hydroxy-3H-phenoxazin-3-one × 2
GOL GLYCEROL × 5
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
pH 6.5;293 K;reservoir:
30 % polyethylene glycol 8000, 0.2 M ammonium sulfate, 0.1 M sodium cacodylate buffer;
drop:
2 microliters preincubated CK2alpha/resorufin mixture (5 mM resorufin, 5 mg/ml Ck2alpha), 1 reservoir solution , pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 3.20 Å
R-free 0.231
|
|
3W8L
Crystal structure of human CK2 in complex with inositol hexakisphosphate
提交 2013-03-15
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
片段:UNP Residues 1-335
|
突变:I57V
|
未记录非水小分子
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;296 K;17% polyethylene glycol 4000, 15% glycerol, 8.5% isopropanol, 0.085M Sodium HEPES, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 296K
|
分辨率 2.40 Å
R-free 0.248
|
|
3W8L
Crystal structure of human CK2 in complex with inositol hexakisphosphate
提交 2013-03-15
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–335(335 aa)
片段:UNP Residues 1-335
|
突变:I57V
|
IHP INOSITOL HEXAKISPHOSPHATE × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;296 K;17% polyethylene glycol 4000, 15% glycerol, 8.5% isopropanol, 0.085M Sodium HEPES, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 296K
|
分辨率 2.40 Å
R-free 0.248
|
|
3WAR
Crystal structure of human CK2a
提交 2013-05-07
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
片段:UNP residues 1-335
|
未记录
|
NIO NICOTINIC ACID × 1
EDO 1,2-ETHANEDIOL × 19
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8;277 K;25% ethylene glycol, pH 8, VAPOR DIFFUSION, SITTING DROP, temperature 277K
|
分辨率 1.04 Å
R-free 0.168
|
|
3WIK
Crystal structure of the CK2alpha/compound10 complex
提交 2013-09-18
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
片段:UNP RESIDUES 1-335
|
未记录
|
LCT N-[5-(4-nitrophenyl)-1,3,4-thiadiazol-2-yl]acetamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8;277 K;25% ethyleneglycol, pH 8, VAPOR DIFFUSION, SITTING DROP, temperature 277K
|
分辨率 2.00 Å
R-free 0.211
|
|
3WIL
Crystal structure of the CK2alpha/compound3 complex
提交 2013-09-18
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
片段:UNP RESIDUES 1-335
|
未记录
|
LCD {[(2Z)-2-(3,4-dimethoxybenzylidene)-3-oxo-2,3-dihydro-1-benzofuran-6-yl]oxy}acetic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8;277 K;25% ethyleneglycol, pH 8, VAPOR DIFFUSION, SITTING DROP, temperature 277K
|
分辨率 2.90 Å
R-free 0.281
|
|
3WOW
Crystal structure of human CK2a with AMPPNP
提交 2014-01-06
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
MG MAGNESIUM ION × 2
ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1
EDO 1,2-ETHANEDIOL × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8;277 K;25% ethylene glycol, pH 8, VAPOR DIFFUSION, SITTING DROP, temperature 277K
|
分辨率 2.50 Å
R-free 0.240
|
|
4DGL
Crystal Structure of the CK2 Tetrameric Holoenzyme
提交 2012-01-26
|
构建体不同
突变/修饰不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 4
PDB 声明:tetrameric
|
链 C
1–335(335 aa)
链 D
1–335(335 aa)
|
突变:R125Y
突变:R125Y
|
ZN ZINC ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 7;293 K;PEG 3350 18%, 0.2 M sodium malonate, pH 7, vapor diffusion, temperature 293K
|
分辨率 3.00 Å
R-free 0.222
|
|
4FBX
Complex structure of human protein kinase CK2 catalytic subunit crystallized in the presence of a bisubstrate inhibitor
提交 2012-05-23
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 A
1–335(335 aa)
|
未记录
|
CL CHLORIDE ION × 5
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;The concentrated enzyme solution contained 6.2 mg/ml protein dissolved in 500 mM NaCl, 25 mM Tris/HCl, pH 8.5. Nine volume parts of this protein stock solution were mixed with one part 12 mM ARC-1154 dissolved in 100% dimethyl sulfoxide. The CK2alpha1-335/ARC-1154 mixture was incubated for 30 min at room temperature. The best crystals grew with a reservoir solution composed of 4.4 M NaCl, 100 mM citric acid, pH 5.25 and mixing 2 microliter of this reservoir solution with microliter CK2alpha1-335/ARC-1154 mixture, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 2.33 Å
R-free 0.249
|
|
4GRB
Casein kinase 2 (CK2) bound to inhibitor
提交 2012-08-24
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–333(333 aa)
片段:Transferase
|
未记录
|
CL CHLORIDE ION × 1
0XG 5-(2-{[4-(dimethylcarbamoyl)phenyl]amino}-4-methoxypyrimidin-5-yl)thiophene-3-carboxylic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;296 K;22-26% PEG 6K, 200 mM ammonium sulfate, 100 mM MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 296K
|
分辨率 2.15 Å
R-free 0.251
|
|
4GUB
Casein Kinase II bound to Inhibitor
提交 2012-08-29
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–333(333 aa)
片段:subunit alpha
|
未记录
|
0Y4 N-[5-({3-cyano-7-[(1-methyl-1H-imidazol-4-yl)amino]pyrazolo[1,5-a]pyrimidin-5-yl}amino)-2-methylphenyl]acetamide × 1
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;296 K;22-26% PEG 6K, 200 mM ammonium sulfate, 100 mM MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 296K
|
分辨率 2.20 Å
R-free 0.238
|
|
4GYW
Crystal structure of human O-GlcNAc Transferase in complex with UDP and a glycopeptide
提交 2012-09-05
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 D
340–352(13 aa)
|
未记录
|
UDP URIDINE-5'-DIPHOSPHATE × 1
SO4 SULFATE ION × 1
NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;298 K;1.6M Lithium Sulfate, 0.1M Bis Tris Propane pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 1.70 Å
R-free 0.205
|
|
4GYW
Crystal structure of human O-GlcNAc Transferase in complex with UDP and a glycopeptide
提交 2012-09-05
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 B
340–352(13 aa)
|
未记录
|
UDP URIDINE-5'-DIPHOSPHATE × 1
SO4 SULFATE ION × 2
NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;298 K;1.6M Lithium Sulfate, 0.1M Bis Tris Propane pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 1.70 Å
R-free 0.205
|
|
4GYW
Crystal structure of human O-GlcNAc Transferase in complex with UDP and a glycopeptide
提交 2012-09-05
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 3
蛋白异源复合物
异源复合物;蛋白 × 4
PDB 声明:tetrameric
|
链 D
340–352(13 aa)
|
未记录
|
UDP URIDINE-5'-DIPHOSPHATE × 2
SO4 SULFATE ION × 2
NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;298 K;1.6M Lithium Sulfate, 0.1M Bis Tris Propane pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 1.70 Å
R-free 0.205
|
|
4GYW
Crystal structure of human O-GlcNAc Transferase in complex with UDP and a glycopeptide
提交 2012-09-05
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 4
蛋白异源复合物
异源复合物;蛋白 × 4
PDB 声明:tetrameric
|
链 B
340–352(13 aa)
|
未记录
|
UDP URIDINE-5'-DIPHOSPHATE × 2
SO4 SULFATE ION × 4
NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;298 K;1.6M Lithium Sulfate, 0.1M Bis Tris Propane pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 1.70 Å
R-free 0.205
|
|
4GYY
Crystal structure of human O-GlcNAc Transferase with UDP-5SGlcNAc and a peptide substrate
提交 2012-09-05
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 B
340–352(13 aa)
|
未记录
|
12V (2S,3R,4R,5S,6R)-3-(acetylamino)-4,5-dihydroxy-6-(hydroxymethyl)tetrahydro-2H-thiopyran-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate × 1
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;298 K;1.6M Lithium Sulfate, 0.1M Bis Tris Propane pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 1.85 Å
R-free 0.237
|
|
4GYY
Crystal structure of human O-GlcNAc Transferase with UDP-5SGlcNAc and a peptide substrate
提交 2012-09-05
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 D
340–352(13 aa)
|
未记录
|
12V (2S,3R,4R,5S,6R)-3-(acetylamino)-4,5-dihydroxy-6-(hydroxymethyl)tetrahydro-2H-thiopyran-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate × 1
SO4 SULFATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;298 K;1.6M Lithium Sulfate, 0.1M Bis Tris Propane pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 1.85 Å
R-free 0.237
|
|
4GYY
Crystal structure of human O-GlcNAc Transferase with UDP-5SGlcNAc and a peptide substrate
提交 2012-09-05
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 3
蛋白异源复合物
异源复合物;蛋白 × 4
PDB 声明:tetrameric
|
链 B
340–352(13 aa)
|
未记录
|
12V (2S,3R,4R,5S,6R)-3-(acetylamino)-4,5-dihydroxy-6-(hydroxymethyl)tetrahydro-2H-thiopyran-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate × 2
SO4 SULFATE ION × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;298 K;1.6M Lithium Sulfate, 0.1M Bis Tris Propane pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 1.85 Å
R-free 0.237
|
|
4GYY
Crystal structure of human O-GlcNAc Transferase with UDP-5SGlcNAc and a peptide substrate
提交 2012-09-05
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 4
蛋白异源复合物
异源复合物;蛋白 × 4
PDB 声明:tetrameric
|
链 D
340–352(13 aa)
|
未记录
|
12V (2S,3R,4R,5S,6R)-3-(acetylamino)-4,5-dihydroxy-6-(hydroxymethyl)tetrahydro-2H-thiopyran-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate × 2
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;298 K;1.6M Lithium Sulfate, 0.1M Bis Tris Propane pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 1.85 Å
R-free 0.237
|
|
4GZ3
Crystal structure of human O-GlcNAc Transferase with UDP and a thioglycopeptide
提交 2012-09-05
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 B
340–352(13 aa)
|
未记录
|
UDP URIDINE-5'-DIPHOSPHATE × 1
SO4 SULFATE ION × 2
0YT 2-acetamido-2-deoxy-5-thio-beta-D-glucopyranose × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;298 K;1.6M Lithium Sulfate, 0.1M Bis Tris Propane pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 1.90 Å
R-free 0.250
|
|
4GZ3
Crystal structure of human O-GlcNAc Transferase with UDP and a thioglycopeptide
提交 2012-09-05
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 D
340–352(13 aa)
|
未记录
|
UDP URIDINE-5'-DIPHOSPHATE × 1
SO4 SULFATE ION × 1
0YT 2-acetamido-2-deoxy-5-thio-beta-D-glucopyranose × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;298 K;1.6M Lithium Sulfate, 0.1M Bis Tris Propane pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 1.90 Å
R-free 0.250
|
|
4GZ3
Crystal structure of human O-GlcNAc Transferase with UDP and a thioglycopeptide
提交 2012-09-05
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 3
蛋白异源复合物
异源复合物;蛋白 × 4
PDB 声明:tetrameric
|
链 B
340–352(13 aa)
|
未记录
|
UDP URIDINE-5'-DIPHOSPHATE × 2
SO4 SULFATE ION × 4
0YT 2-acetamido-2-deoxy-5-thio-beta-D-glucopyranose × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;298 K;1.6M Lithium Sulfate, 0.1M Bis Tris Propane pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 1.90 Å
R-free 0.250
|
|
4GZ3
Crystal structure of human O-GlcNAc Transferase with UDP and a thioglycopeptide
提交 2012-09-05
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 4
蛋白异源复合物
异源复合物;蛋白 × 4
PDB 声明:tetrameric
|
链 D
340–352(13 aa)
|
未记录
|
UDP URIDINE-5'-DIPHOSPHATE × 2
SO4 SULFATE ION × 2
0YT 2-acetamido-2-deoxy-5-thio-beta-D-glucopyranose × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;298 K;1.6M Lithium Sulfate, 0.1M Bis Tris Propane pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 1.90 Å
R-free 0.250
|
|
4IB5
Structure of human protein kinase CK2 catalytic subunit in complex with a CK2beta-competitive cyclic peptide
提交 2012-12-08
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 A
1–335(335 aa)
片段:UNP residues 1-355
|
未记录
|
GOL GLYCEROL × 5
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
mmCIF 未提供已读取条件
|
分辨率 2.20 Å
R-free 0.218
|
|
4IB5
Structure of human protein kinase CK2 catalytic subunit in complex with a CK2beta-competitive cyclic peptide
提交 2012-12-08
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 B
1–335(335 aa)
片段:UNP residues 1-355
|
未记录
|
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
mmCIF 未提供已读取条件
|
分辨率 2.20 Å
R-free 0.218
|
|
4IB5
Structure of human protein kinase CK2 catalytic subunit in complex with a CK2beta-competitive cyclic peptide
提交 2012-12-08
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 3
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 C
1–335(335 aa)
片段:UNP residues 1-355
|
未记录
|
GOL GLYCEROL × 3
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
mmCIF 未提供已读取条件
|
分辨率 2.20 Å
R-free 0.218
|
|
4KWP
Crystal Structure of Human CK2-alpha in complex with a benzimidazole inhibitor (K164) at 1.25 A resolution
提交 2013-05-24
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–336(336 aa)
片段:UNP residues 1-336
|
未记录
|
SO4 SULFATE ION × 4
EDO 1,2-ETHANEDIOL × 3
EXX 4,5,6,7-tetrabromo-1-(2-deoxy-beta-D-erythro-pentofuranosyl)-1H-benzimidazole × 1
PGE TRIETHYLENE GLYCOL × 1
PEG DI(HYDROXYETHYL)ETHER × 1
DMS DIMETHYL SULFOXIDE × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 8.5;293 K;0.1 M Tris-HCl, 0.2 M lithium sulphate, 32% w/v PEG 4000, pH 8.5, vapor diffusion, temperature 293K
|
分辨率 1.25 Å
R-free 0.170
|
|
4MD7
Crystal Structure of full-length symmetric CK2 holoenzyme
提交 2013-08-22
|
构建体不同
突变/修饰不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 4
PDB 声明:tetrameric
|
链 E
1–391(391 aa)
链 F
1–391(391 aa)
|
突变:T344E/T360E/S362E/S370E
突变:T344E/T360E/S362E/S370E
|
ZN ZINC ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 6.5;277 K;20% PEG3350, 0.2 M ammonium citrate, pH 6.5, VAPOR DIFFUSION, temperature 277K
|
分辨率 3.10 Å
R-free 0.263
|
|
4MD7
Crystal Structure of full-length symmetric CK2 holoenzyme
提交 2013-08-22
|
构建体不同
突变/修饰不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白异源复合物
异源复合物;蛋白 × 4
PDB 声明:tetrameric
|
链 G
1–391(391 aa)
链 H
1–391(391 aa)
|
突变:T344E/T360E/S362E/S370E
突变:T344E/T360E/S362E/S370E
|
ZN ZINC ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 6.5;277 K;20% PEG3350, 0.2 M ammonium citrate, pH 6.5, VAPOR DIFFUSION, temperature 277K
|
分辨率 3.10 Å
R-free 0.263
|
|
4MD8
Crystal Structure of full-length symmetric CK2 holoenzyme with mutated alpha subunit (F121E)
提交 2013-08-22
|
构建体不同
突变/修饰不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 4
PDB 声明:tetrameric
|
链 E
1–391(391 aa)
链 F
1–391(391 aa)
|
突变:F121E
突变:F121E
|
ZN ZINC ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 6.5;277 K;20% PEG3350, 0.2 M ammonium citrate, pH 6.5, VAPOR DIFFUSION, temperature 277K
|
分辨率 3.30 Å
R-free 0.249
|
|
4MD8
Crystal Structure of full-length symmetric CK2 holoenzyme with mutated alpha subunit (F121E)
提交 2013-08-22
|
构建体不同
突变/修饰不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白异源复合物
异源复合物;蛋白 × 4
PDB 声明:tetrameric
|
链 G
1–391(391 aa)
链 H
1–391(391 aa)
|
突变:F121E
突变:F121E
|
ZN ZINC ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 6.5;277 K;20% PEG3350, 0.2 M ammonium citrate, pH 6.5, VAPOR DIFFUSION, temperature 277K
|
分辨率 3.30 Å
R-free 0.249
|
|
4MD9
Crystal Structure of symmetric CK2 holoenzyme with mutated alpha subunit (F121E truncated at aa 336)
提交 2013-08-22
|
构建体不同
突变/修饰不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 4
PDB 声明:tetrameric
|
链 E
1–336(336 aa)
片段:kinase domain (UNP residues 1-336)
链 F
1–336(336 aa)
片段:kinase domain (UNP residues 1-336)
|
突变:F121E
突变:F121E
|
ZN ZINC ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 6.5;277 K;20% PEG3350, 0.2 M ammonium citrate, pH 6.5, VAPOR DIFFUSION, temperature 277K
|
分辨率 3.50 Å
R-free 0.259
|
|
4MD9
Crystal Structure of symmetric CK2 holoenzyme with mutated alpha subunit (F121E truncated at aa 336)
提交 2013-08-22
|
构建体不同
突变/修饰不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白异源复合物
异源复合物;蛋白 × 4
PDB 声明:tetrameric
|
链 H
1–336(336 aa)
片段:kinase domain (UNP residues 1-336)
链 K
1–336(336 aa)
片段:kinase domain (UNP residues 1-336)
|
突变:F121E
突变:F121E
|
ZN ZINC ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 6.5;277 K;20% PEG3350, 0.2 M ammonium citrate, pH 6.5, VAPOR DIFFUSION, temperature 277K
|
分辨率 3.50 Å
R-free 0.259
|
|
4MD9
Crystal Structure of symmetric CK2 holoenzyme with mutated alpha subunit (F121E truncated at aa 336)
提交 2013-08-22
|
构建体不同
突变/修饰不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 3
蛋白异源复合物
异源复合物;蛋白 × 4
PDB 声明:tetrameric
|
链 G
1–336(336 aa)
片段:kinase domain (UNP residues 1-336)
链 P
1–336(336 aa)
片段:kinase domain (UNP residues 1-336)
|
突变:F121E
突变:F121E
|
ZN ZINC ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 6.5;277 K;20% PEG3350, 0.2 M ammonium citrate, pH 6.5, VAPOR DIFFUSION, temperature 277K
|
分辨率 3.50 Å
R-free 0.259
|
|
4MD9
Crystal Structure of symmetric CK2 holoenzyme with mutated alpha subunit (F121E truncated at aa 336)
提交 2013-08-22
|
构建体不同
突变/修饰不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 4
蛋白异源复合物
异源复合物;蛋白 × 4
PDB 声明:tetrameric
|
链 L
1–336(336 aa)
片段:kinase domain (UNP residues 1-336)
链 M
1–336(336 aa)
片段:kinase domain (UNP residues 1-336)
|
突变:F121E
突变:F121E
|
ZN ZINC ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 6.5;277 K;20% PEG3350, 0.2 M ammonium citrate, pH 6.5, VAPOR DIFFUSION, temperature 277K
|
分辨率 3.50 Å
R-free 0.259
|
|
4NH1
Crystal structure of a heterotetrameric CK2 holoenzyme complex carrying the Andante-mutation in CK2beta and consistent with proposed models of autoinhibition and trans-autophosphorylation
提交 2013-11-04
|
构建体不同
突变/修饰不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 4
PDB 声明:tetrameric
|
链 A
1–335(335 aa)
片段:UNP residues 1-335
链 B
1–335(335 aa)
片段:UNP residues 1-335
|
未记录
|
MG MAGNESIUM ION × 4
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 2
GOL GLYCEROL × 1
ZN ZINC ION × 2
|
X-RAY DIFFRACTION
mmCIF 未提供已读取条件
|
分辨率 3.30 Å
R-free 0.251
|
|
4RLL
Crystal structure of human CK2alpha in complex with the ATP-competitive inhibitor 4-[(E)-(fluoren-9-ylidenehydrazinylidene)-methyl] benzoate
提交 2014-10-17
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
片段:N-terminal domain (UNP residues 1-335)
|
未记录
|
GOL GLYCEROL × 1
E91 4-[(E)-(9H-fluoren-9-ylidenehydrazinylidene)methyl]benzoic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.6;293 K;Reservoir: 30 % PEG 4000, 0.2 M ammonium acetate, 0.1 M sodium citrate pH 5.6, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 1.85 Å
R-free 0.213
|
|
4UB7
High-salt structure of protein kinase CK2 catalytic subunit with 4'-carboxy-6,8-bromo-flavonol (FLC26) showing an extreme distortion of the ATP-binding loop combined with a pi-halogen bond
提交 2014-08-12
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:Monomeric
|
链 A
1–335(335 aa)
片段:UNP residues 1-335
|
未记录
|
3G5 4-(6,8-dibromo-3-hydroxy-4-oxo-4H-chromen-2-yl)benzoic acid × 1
CL CHLORIDE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;293 K;4M sodium chloride
|
分辨率 2.10 Å
R-free 0.219
|
|
4UBA
Low-salt structure of protein kinase CK2 catalytic subunit with 4'-carboxy-6,8-bromo-flavonol (FLC26)
提交 2014-08-12
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:Monomeric
|
链 A
1–335(335 aa)
片段:UNP residues 1-335
|
未记录
|
3G5 4-(6,8-dibromo-3-hydroxy-4-oxo-4H-chromen-2-yl)benzoic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;293 K;Reservoir: 30 %(w/v) PEG4000, 0.2 M ammonium acetate, 0.1 M trisodium citrate
|
分辨率 3.00 Å
R-free 0.239
|
|
4UBA
Low-salt structure of protein kinase CK2 catalytic subunit with 4'-carboxy-6,8-bromo-flavonol (FLC26)
提交 2014-08-12
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:Monomeric
|
链 B
1–335(335 aa)
片段:UNP residues 1-335
|
未记录
|
3G5 4-(6,8-dibromo-3-hydroxy-4-oxo-4H-chromen-2-yl)benzoic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;293 K;Reservoir: 30 %(w/v) PEG4000, 0.2 M ammonium acetate, 0.1 M trisodium citrate
|
分辨率 3.00 Å
R-free 0.239
|
|
5B0X
Crystal structure of the CK2a/benzoic acid derivative complex
提交 2015-11-13
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
片段:UNP residues 1-335
|
未记录
|
HCK 4-[2-[(4-methoxyphenyl)carbonylamino]-1,3-thiazol-5-yl]benzoic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;277 K;ethylene glycol
|
分辨率 2.30 Å
R-free 0.234
|
|
5CLP
Crystal Structure of CK2alpha with 3,4-dichlorophenethylamine bound
提交 2015-07-16
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:UNP residues 2-329
|
突变:R21S
|
42J 2-(3,4-dichlorophenyl)ethanamine × 6
ACT ACETATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 1.68 Å
R-free 0.193
|
|
5CLP
Crystal Structure of CK2alpha with 3,4-dichlorophenethylamine bound
提交 2015-07-16
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:UNP residues 2-329
|
突变:R21S
|
42J 2-(3,4-dichlorophenyl)ethanamine × 5
ACT ACETATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 1.68 Å
R-free 0.193
|
|
5CQU
Monoclinic Complex Structure of Protein Kinase CK2 Catalytic Subunit with a Benzotriazole-Based Inhibitor Generated by click-chemistry
提交 2015-07-22
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
JRJ 4-[4-[2-[4,5,6,7-tetrakis(bromanyl)benzotriazol-2-yl]ethyl]-1,2,3-triazol-1-yl]butan-1-amine × 1
SO4 SULFATE ION × 2
GOL GLYCEROL × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;298 K;Protein solution: 6 mg/ml CK2alpha, 0.44 mM AMPPNP, 0.89 mM magnesium chloride, 250 mM NaCl, 12.5 mM Tris/HCl, pH 8.5; Reservoir: 30%(w/v) PEG4000, 0.2 M Lithiumsulfate, 0.1 M Tris/HCL, pH 8.5; the inhibitor JRJ was introduced by extensive soaking for one week
|
分辨率 2.35 Å
R-free 0.251
|
|
5CQW
Tetragonal Complex Structure of Protein Kinase CK2 Catalytic Subunit with a Benzotriazole-Based Inhibitor Generated by click-chemistry
提交 2015-07-22
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
JRJ 4-[4-[2-[4,5,6,7-tetrakis(bromanyl)benzotriazol-2-yl]ethyl]-1,2,3-triazol-1-yl]butan-1-amine × 1
SO4 SULFATE ION × 6
CL CHLORIDE ION × 1
GOL GLYCEROL × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;298 K;Protein solution: 6 mg/ml CK2alpha, 1 mM Inhibitor, 10 %(v/v) DMSO, 250 mM NaCl, 12.5 mM Tris/HCl, pH 8.5; Reservoir: 25 %(w/v) PEG 3350, 0.2 M Lithiumsulfate, 0.1 M Bis-Tris/HCl, pH 5.5; drop: 1 Mikroliter pre-incubated CK2alpha/Inhibitor solution and 1 Mikroliter reservoir
|
分辨率 2.65 Å
R-free 0.229
|
|
5CQW
Tetragonal Complex Structure of Protein Kinase CK2 Catalytic Subunit with a Benzotriazole-Based Inhibitor Generated by click-chemistry
提交 2015-07-22
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–335(335 aa)
|
未记录
|
JRJ 4-[4-[2-[4,5,6,7-tetrakis(bromanyl)benzotriazol-2-yl]ethyl]-1,2,3-triazol-1-yl]butan-1-amine × 1
SO4 SULFATE ION × 5
CL CHLORIDE ION × 1
GOL GLYCEROL × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;298 K;Protein solution: 6 mg/ml CK2alpha, 1 mM Inhibitor, 10 %(v/v) DMSO, 250 mM NaCl, 12.5 mM Tris/HCl, pH 8.5; Reservoir: 25 %(w/v) PEG 3350, 0.2 M Lithiumsulfate, 0.1 M Bis-Tris/HCl, pH 5.5; drop: 1 Mikroliter pre-incubated CK2alpha/Inhibitor solution and 1 Mikroliter reservoir
|
分辨率 2.65 Å
R-free 0.229
|
|
5CS6
Crystal Structure of CK2alpha with Compound 3 bound
提交 2015-07-23
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:UNP residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ACT ACETATE ION × 3
K82 1-(3-chloro-4-propoxyphenyl)methanamine × 4
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 1.88 Å
R-free 0.216
|
|
5CS6
Crystal Structure of CK2alpha with Compound 3 bound
提交 2015-07-23
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:UNP residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ACT ACETATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 1.88 Å
R-free 0.216
|
|
5CSH
Crystal Structure of CK2alpha with Compound 4 bound
提交 2015-07-23
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
54E 1-(2-chlorobiphenyl-4-yl)methanamine × 2
ATP ADENOSINE-5'-TRIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 1.59 Å
R-free 0.207
|
|
5CSH
Crystal Structure of CK2alpha with Compound 4 bound
提交 2015-07-23
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
54E 1-(2-chlorobiphenyl-4-yl)methanamine × 2
ATP ADENOSINE-5'-TRIPHOSPHATE × 1
ACT ACETATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 1.59 Å
R-free 0.207
|
|
5CSP
Crystal Structure of CK2alpha with Compound 5 bound
提交 2015-07-23
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:UNP residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
54G 2-hydroxy-5-methylbenzoic acid × 1
ACT ACETATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.50 Å
R-free 0.186
|
|
5CSV
Crystal Structure of CK2alpha with Compound 6 bound
提交 2015-07-23
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
ACT ACETATE ION × 2
GAB 3-AMINOBENZOIC ACID × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.38 Å
R-free 0.195
|
|
5CT0
Crystal structure of CK2alpha with 3-(3-chloro-4-(phenyl)benzylamino)propan-1-ol bound
提交 2015-07-23
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:UNP residues 2-329
|
突变:R21S
|
ACT ACETATE ION × 2
54P 3-{[(2-chlorobiphenyl-4-yl)methyl]amino}propan-1-ol × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 2.01 Å
R-free 0.220
|
|
5CT0
Crystal structure of CK2alpha with 3-(3-chloro-4-(phenyl)benzylamino)propan-1-ol bound
提交 2015-07-23
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:UNP residues 2-329
|
突变:R21S
|
54P 3-{[(2-chlorobiphenyl-4-yl)methyl]amino}propan-1-ol × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 2.01 Å
R-free 0.220
|
|
5CTP
Crystal structure of CK2alpha with N-(3-(3-chloro-4-(phenyl)benzylamino)propyl)acetamide bound
提交 2015-07-24
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ACT ACETATE ION × 1
54R N-(3-{[(2-chlorobiphenyl-4-yl)methyl]amino}propyl)acetamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 2.03 Å
R-free 0.199
|
|
5CTP
Crystal structure of CK2alpha with N-(3-(3-chloro-4-(phenyl)benzylamino)propyl)acetamide bound
提交 2015-07-24
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ACT ACETATE ION × 3
54R N-(3-{[(2-chlorobiphenyl-4-yl)methyl]amino}propyl)acetamide × 1
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 2.03 Å
R-free 0.199
|
|
5CU0
Crystal structure of CK2alpha with 2-hydroxy-5-methylbenzoic acid and N-(3-(3-chloro-4-(phenyl)benzylamino)propyl)acetamide bound
提交 2015-07-24
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
54R N-(3-{[(2-chlorobiphenyl-4-yl)methyl]amino}propyl)acetamide × 2
54G 2-hydroxy-5-methylbenzoic acid × 1
ACT ACETATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 2.18 Å
R-free 0.236
|
|
5CU0
Crystal structure of CK2alpha with 2-hydroxy-5-methylbenzoic acid and N-(3-(3-chloro-4-(phenyl)benzylamino)propyl)acetamide bound
提交 2015-07-24
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
54R N-(3-{[(2-chlorobiphenyl-4-yl)methyl]amino}propyl)acetamide × 2
54G 2-hydroxy-5-methylbenzoic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 2.18 Å
R-free 0.236
|
|
5CU2
Crystal structure of CK2alpha with 2-hydroxy-5-methylbenzoic acid and (methyl 4-((3-(3-chloro-4-(phenyl)benzylamino)propyl)amino)-4-oxobutanoat bound
提交 2015-07-24
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
551 methyl 3-[(3-{[(2-chlorobiphenyl-4-yl)methyl]amino}propyl)amino]-3-oxopropanoate × 3
54G 2-hydroxy-5-methylbenzoic acid × 1
PO4 PHOSPHATE ION × 1
ACT ACETATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 1.71 Å
R-free 0.204
|
|
5CU2
Crystal structure of CK2alpha with 2-hydroxy-5-methylbenzoic acid and (methyl 4-((3-(3-chloro-4-(phenyl)benzylamino)propyl)amino)-4-oxobutanoat bound
提交 2015-07-24
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
551 methyl 3-[(3-{[(2-chlorobiphenyl-4-yl)methyl]amino}propyl)amino]-3-oxopropanoate × 2
54G 2-hydroxy-5-methylbenzoic acid × 1
PO4 PHOSPHATE ION × 1
ACT ACETATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 1.71 Å
R-free 0.204
|
|
5CU3
Crystal structure of CK2alpha bound to CAM4066
提交 2015-07-24
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白同源多聚体
同源多聚体;蛋白 × 2
PDB 声明:dimeric
|
链 A
2–329(328 aa)
片段:UNP residues 2-329
链 B
2–329(328 aa)
片段:UNP residues 2-329
|
突变:R21S
突变:R21S
|
ACT ACETATE ION × 5
54S N-[(2-chlorobiphenyl-4-yl)methyl]-beta-alanyl-N-(3-carboxyphenyl)-beta-alaninamide × 2
DMS DIMETHYL SULFOXIDE × 2
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 1.79 Å
R-free 0.202
|
|
5CU4
Crystal structure of CK2alpha bound to CAM4066
提交 2015-07-24
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:UNP residues 2-239
|
突变:R21S, K74A, K75A, K76A
|
ACT ACETATE ION × 3
54S N-[(2-chlorobiphenyl-4-yl)methyl]-beta-alanyl-N-(3-carboxyphenyl)-beta-alaninamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.56 Å
R-free 0.195
|
|
5CU6
Crystal Structure of CK2alpha
提交 2015-07-24
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 1
ACT ACETATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.36 Å
R-free 0.209
|
|
5CVF
Crystal Structure of CK2alpha with Compound 5 bound
提交 2015-07-26
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
54Z 1-[3-chloro-4-(trifluoromethoxy)phenyl]methanamine × 1
ATP ADENOSINE-5'-TRIPHOSPHATE × 1
ACT ACETATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.63 Å
R-free 0.209
|
|
5CVG
Crystal Structure of CK2alpha with a novel closed conformation of the aD loop
提交 2015-07-26
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSG
|
突变:R21S
|
ACT ACETATE ION × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;92mM Mes pH 6.5, 33% glycerol ethoxylate, 750mM ammonium acetate
|
分辨率 1.25 Å
R-free 0.170
|
|
5CVH
Crystal Structure of CK2alpha
提交 2015-07-26
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ADP ADENOSINE-5'-DIPHOSPHATE × 1
IHP INOSITOL HEXAKISPHOSPHATE × 1
MG MAGNESIUM ION × 1
ACT ACETATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 1.85 Å
R-free 0.220
|
|
5CVH
Crystal Structure of CK2alpha
提交 2015-07-26
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ADP ADENOSINE-5'-DIPHOSPHATE × 1
IHP INOSITOL HEXAKISPHOSPHATE × 1
MG MAGNESIUM ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 1.85 Å
R-free 0.220
|
|
5CX9
Crystal structure of CK2alpha with (methyl 4-((3-(3-chloro-4-(phenyl)benzylamino)propyl)amino)-4-oxobutanoate bound
提交 2015-07-28
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:UNP residues 2-329
|
突变:R21S
|
ACT ACETATE ION × 4
551 methyl 3-[(3-{[(2-chlorobiphenyl-4-yl)methyl]amino}propyl)amino]-3-oxopropanoate × 3
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 1.73 Å
R-free 0.198
|
|
5CX9
Crystal structure of CK2alpha with (methyl 4-((3-(3-chloro-4-(phenyl)benzylamino)propyl)amino)-4-oxobutanoate bound
提交 2015-07-28
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:UNP residues 2-329
|
突变:R21S
|
ACT ACETATE ION × 2
551 methyl 3-[(3-{[(2-chlorobiphenyl-4-yl)methyl]amino}propyl)amino]-3-oxopropanoate × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 1.73 Å
R-free 0.198
|
|
5H8B
Crystal structure of CK2 with compound 2
提交 2015-12-23
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–333(333 aa)
片段:UNP residues 1-333
|
未记录
|
SO4 SULFATE ION × 7
EDO 1,2-ETHANEDIOL × 9
5Y2 ~{N}-[5-[[3-cyano-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidin-5-yl]amino]-2-methyl-phenyl]ethanamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;22-26% PEG 6K, 200 mM ammonium sulfate, 100 mM MES, pH 6.5
|
分辨率 2.55 Å
R-free 0.216
|
|
5H8B
Crystal structure of CK2 with compound 2
提交 2015-12-23
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–333(333 aa)
片段:UNP residues 1-333
|
未记录
|
SO4 SULFATE ION × 5
EDO 1,2-ETHANEDIOL × 14
5Y2 ~{N}-[5-[[3-cyano-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidin-5-yl]amino]-2-methyl-phenyl]ethanamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;22-26% PEG 6K, 200 mM ammonium sulfate, 100 mM MES, pH 6.5
|
分辨率 2.55 Å
R-free 0.216
|
|
5H8E
Crystal structure of CK2 with compound 7h
提交 2015-12-23
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–333(333 aa)
片段:UNP residues 1-333
|
未记录
|
SO4 SULFATE ION × 6
EDO 1,2-ETHANEDIOL × 14
5Y3 ~{N}-[2-[2-azanylethyl(methyl)amino]-5-[[3-cyano-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidin-5-yl]amino]phenyl]ethanamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;22-26% PEG 6K, 200 mM ammonium sulfate, 100 mM MES, pH 6.5
|
分辨率 2.15 Å
R-free 0.196
|
|
5H8E
Crystal structure of CK2 with compound 7h
提交 2015-12-23
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–333(333 aa)
片段:UNP residues 1-333
|
未记录
|
SO4 SULFATE ION × 6
EDO 1,2-ETHANEDIOL × 15
5Y3 ~{N}-[2-[2-azanylethyl(methyl)amino]-5-[[3-cyano-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidin-5-yl]amino]phenyl]ethanamide × 1
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;22-26% PEG 6K, 200 mM ammonium sulfate, 100 mM MES, pH 6.5
|
分辨率 2.15 Å
R-free 0.196
|
|
5H8G
Crystal structure of CK2 with compound 7b
提交 2015-12-23
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–333(333 aa)
片段:UNP residues 1-333
|
未记录
|
CL CHLORIDE ION × 2
EDO 1,2-ETHANEDIOL × 18
5Y4 ~{N}-[5-[[3-cyano-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidin-5-yl]amino]-2-[2-(dimethylamino)ethyl-methyl-amino]phenyl]ethanamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;22-26% PEG 6K, 200 mM ammonium sulfate, 100 mM MES, pH 6.5
|
分辨率 2.00 Å
R-free 0.198
|
|
5KU8
Crystal structure of CK2
提交 2016-07-13
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–332(331 aa)
片段:UNP residues 2-332
|
未记录
|
SO4 SULFATE ION × 8
EDO 1,2-ETHANEDIOL × 16
6XK ~{N}-[2-[(1~{S},2~{S})-2-(aminomethyl)cyclopropyl]-5-[[3-cyano-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidin-5-yl]amino]phenyl]ethanamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;22-26% PEG 6K, 200 mM ammonium sulfate, 100 mM MES
|
分辨率 2.22 Å
R-free 0.216
|
|
5KU8
Crystal structure of CK2
提交 2016-07-13
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–332(331 aa)
片段:UNP residues 2-332
|
未记录
|
SO4 SULFATE ION × 4
EDO 1,2-ETHANEDIOL × 11
6XK ~{N}-[2-[(1~{S},2~{S})-2-(aminomethyl)cyclopropyl]-5-[[3-cyano-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidin-5-yl]amino]phenyl]ethanamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;22-26% PEG 6K, 200 mM ammonium sulfate, 100 mM MES
|
分辨率 2.22 Å
R-free 0.216
|
|
5KWH
Crystal structure of CK2
提交 2016-07-18
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–333(333 aa)
|
未记录
|
SO4 SULFATE ION × 7
EDO 1,2-ETHANEDIOL × 14
6XT ~{N}-[5-[[7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidin-5-yl]amino]-2-methyl-phenyl]ethanamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;22-26% PEG 6K, 200 mM ammonium sulfate, 100 mM MES
|
分辨率 2.12 Å
R-free 0.208
|
|
5KWH
Crystal structure of CK2
提交 2016-07-18
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–333(333 aa)
|
未记录
|
SO4 SULFATE ION × 6
EDO 1,2-ETHANEDIOL × 10
6XT ~{N}-[5-[[7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidin-5-yl]amino]-2-methyl-phenyl]ethanamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;22-26% PEG 6K, 200 mM ammonium sulfate, 100 mM MES
|
分辨率 2.12 Å
R-free 0.208
|
|
5KWH
Crystal structure of CK2
提交 2016-07-18
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 3
蛋白同源多聚体
同源多聚体;蛋白 × 2
PDB 声明:dimeric
|
链 A
1–333(333 aa)
链 B
1–333(333 aa)
|
未记录
|
SO4 SULFATE ION × 13
EDO 1,2-ETHANEDIOL × 24
6XT ~{N}-[5-[[7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidin-5-yl]amino]-2-methyl-phenyl]ethanamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;22-26% PEG 6K, 200 mM ammonium sulfate, 100 mM MES
|
分辨率 2.12 Å
R-free 0.208
|
|
5M44
Complex structure of human protein kinase CK2 catalytic subunit with a thieno[2,3-d]pyrimidin inhibitor crystallized under high-salt conditions
提交 2016-10-18
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
7EY 3-[5-(4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]sulfanylpropanoic acid × 1
CL CHLORIDE ION × 5
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5;293 K;Protein stock solution: 6 mg/ml CK2alpha1-335 in 0.5 M NaCl, 25 mM Tris/HCl, pH 8.5;
Inhibitor stock solution: 10 mM inhibitor in DMSO;
Protein/inhibitor complex solution: 90 microliter protein stock solution + 10 microliter inhibitor stock solution;
Reservoir solution: 4.2 M NaCl, 0.1 M sodium citrate, pH 5.0;
Drop solution before equlibration: 0.5 microliter protein/inhibitor complex solution + 0.5 microliter reservoir solution
|
分辨率 2.71 Å
R-free 0.259
|
|
5M4C
Complex structure of human protein kinase CK2 catalytic subunit with a thieno[2,3-d]pyrimidin inhibitor crystallized under low-salt conditions
提交 2016-10-18
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
7EY 3-[5-(4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]sulfanylpropanoic acid × 1
CL CHLORIDE ION × 1
GOL GLYCEROL × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;PROTEIN STOCK SOLUTION: 6 MG/M CK2ALPHA1-335 IN 0.5 M NACL, 25 MM TRIS/HCL, PH 8.5;
INHIBITOR STOCK SOLUTION: 10 MM INHIBITOR IN DMSO;
PROTEIN/INHIBITOR COMPLEX SOLUTION: 90 MICROLITER PROTEIN STOCK SOLUTION + 10 MICROLITER INHIBITOR STOCK SOLUTION;
RESERVOIR SOLUTION: 24 % (w/v) PEG8000, 0.2 M KCl;
DROP SOLUTION BEFORE EQULIBRATION: 0.3 MICROLITER PROTEIN/INHIBITOR COMPLEX SOLUTION + 0.3 MICROLITER RESERVOIR SOLUTION
|
分辨率 1.94 Å
R-free 0.197
|
|
5M4F
Complex structure of human protein kinase CK2 catalytic subunit with the inhibitor 4'-carboxy-6,8-chloro-flavonol (FLC21) crystallized under low-salt conditions
提交 2016-10-18
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
7FC 4-[6,8-bis(chloranyl)-3-oxidanyl-4-oxidanylidene-chromen-2-yl]benzoic acid × 1
GOL GLYCEROL × 3
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;PROTEIN STOCK SOLUTION: 6 MG/ML CK2ALPHA1-335 IN 0.5 M NACL, 25 MM TRIS/HCL, PH 8.5;
INHIBITOR STOCK SOLUTION: 10 MM INHIBITOR IN DMSO;
PROTEIN/INHIBITOR COMPLEX SOLUTION: 90 MICROLITER PROTEIN STOCK SOLUTION + 10 MICROLITER INHIBITOR STOCK SOLUTION;
RESERVOIR SOLUTION: 24 % PEG3350, 0.2 M KCl;
DROP SOLUTION BEFORE EQULIBRATION: 0.5 MICROLITER PROTEIN/INHIBITOR COMPLEX SOLUTION + 0.5 MICROLITER RESERVOIR SOLUTION
|
分辨率 1.52 Å
R-free 0.183
|
|
5M4I
Complex structure of human protein kinase CK2 catalytic subunit with the inhibitor 4'-carboxy-6,8-chloro-flavonol (FLC21) crystallized under high-salt conditions
提交 2016-10-18
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
7FC 4-[6,8-bis(chloranyl)-3-oxidanyl-4-oxidanylidene-chromen-2-yl]benzoic acid × 1
CL CHLORIDE ION × 5
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;PROTEIN STOCK SOLUTION: 6 MG/ML
CK2ALPHA1-335 IN 0.5 M NACL, 25 MM TRIS/HCL, PH 8.5;
INHIBITOR STOCK SOLUTION: 10 MM INHIBITOR IN DMSO;
PROTEIN/INHIBITOR COMPLEX SOLUTION: 90 MICROLITER PROTEIN STOCK SOLUTION + 10 MICROLITER INHIBITOR STOCK SOLUTION;
RESERVOIR SOLUTION: 4.3 M
NACL, 0.1 M SODIUM CITRATE, PH 5.2;
DROP SOLUTION BEFORE EQULIBRATION: 0.5 MICROLITER PROTEIN/INHIBITOR COMPLEX SOLUTION + 0.5 MICROLITER RESERVOIR SOLUTION
|
分辨率 2.22 Å
R-free 0.228
|
|
5MMF
Crystal Structure of CK2alpha with Compound 7 bound
提交 2016-12-09
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
JMB (3-chloranyl-4-phenyl-phenyl)methyl-propyl-azanium × 1
ACT ACETATE ION × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.99 Å
R-free 0.218
|
|
5MMF
Crystal Structure of CK2alpha with Compound 7 bound
提交 2016-12-09
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ACT ACETATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.99 Å
R-free 0.218
|
|
5MMR
Crystal Structure of CK2alpha with N-((2-chloro-[1,1'-biphenyl]-4-yl)methyl)butane-1,4-diamine bound
提交 2016-12-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
H83 ~{N}'-[(3-chloranyl-4-phenyl-phenyl)methyl]butane-1,4-diamine × 2
ACT ACETATE ION × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 2.00 Å
R-free 0.226
|
|
5MMR
Crystal Structure of CK2alpha with N-((2-chloro-[1,1'-biphenyl]-4-yl)methyl)butane-1,4-diamine bound
提交 2016-12-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
H83 ~{N}'-[(3-chloranyl-4-phenyl-phenyl)methyl]butane-1,4-diamine × 1
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 2.00 Å
R-free 0.226
|
|
5MO5
Crystal Structure of CK2alpha with N-(3-(((2-chloro-[1,1'-biphenyl]-4-yl)methyl)amino)propyl)methanesulfonamide bound
提交 2016-12-13
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ACT ACETATE ION × 2
4IH ~{N}-[3-[(3-chloranyl-4-phenyl-phenyl)methylamino]propyl]methanesulfonamide × 1
PO4 PHOSPHATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 2.04 Å
R-free 0.213
|
|
5MO5
Crystal Structure of CK2alpha with N-(3-(((2-chloro-[1,1'-biphenyl]-4-yl)methyl)amino)propyl)methanesulfonamide bound
提交 2016-12-13
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 2.04 Å
R-free 0.213
|
|
5MO6
Crystal Structure of CK2alpha with N-(3-(((2-chloro-[1,1'-biphenyl]-4-yl)methyl)amino)propyl)methanesulfonamide bound
提交 2016-12-13
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
未记录非水小分子
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.82 Å
R-free 0.231
|
|
5MO6
Crystal Structure of CK2alpha with N-(3-(((2-chloro-[1,1'-biphenyl]-4-yl)methyl)amino)propyl)methanesulfonamide bound
提交 2016-12-13
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
KXZ 3-[3-[(3-chloranyl-4-phenyl-phenyl)methylamino]propylamino]-3-oxidanylidene-propanoic acid × 1
ACT ACETATE ION × 2
PO4 PHOSPHATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.82 Å
R-free 0.231
|
|
5MO7
Crystal Structure of CK2alpha with N-(3-(((2-chloro-[1,1'-biphenyl]-4-yl)methyl)amino)propyl)methanesulfonamide bound
提交 2016-12-13
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
PO4 PHOSPHATE ION × 2
YRA 3-[(3-chloranyl-4-phenyl-phenyl)methylamino]propanamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 2.15 Å
R-free 0.224
|
|
5MO7
Crystal Structure of CK2alpha with N-(3-(((2-chloro-[1,1'-biphenyl]-4-yl)methyl)amino)propyl)methanesulfonamide bound
提交 2016-12-13
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 2.15 Å
R-free 0.224
|
|
5MO8
Crystal Structure of CK2alpha with N-(3-(((2-chloro-[1,1'-biphenyl]-4-yl)methyl)amino)propyl)methanesulfonamide bound
提交 2016-12-13
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ACT ACETATE ION × 3
C98 3-[[3-[3-[(3-chloranyl-4-phenyl-phenyl)methylamino]propylamino]-3-oxidanylidene-propanoyl]amino]benzoic acid × 1
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.82 Å
R-free 0.219
|
|
5MO8
Crystal Structure of CK2alpha with N-(3-(((2-chloro-[1,1'-biphenyl]-4-yl)methyl)amino)propyl)methanesulfonamide bound
提交 2016-12-13
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
C98 3-[[3-[3-[(3-chloranyl-4-phenyl-phenyl)methylamino]propylamino]-3-oxidanylidene-propanoyl]amino]benzoic acid × 1
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.82 Å
R-free 0.219
|
|
5MOD
Crystal Structure of CK2alpha with N-(3-(((2-chloro-[1,1'-biphenyl]-4-yl)methyl)amino)propyl)methanesulfonamide bound
提交 2016-12-14
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ACT ACETATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 2.08 Å
R-free 0.224
|
|
5MOD
Crystal Structure of CK2alpha with N-(3-(((2-chloro-[1,1'-biphenyl]-4-yl)methyl)amino)propyl)methanesulfonamide bound
提交 2016-12-14
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ACT ACETATE ION × 3
86L (3-chloranyl-4-propan-2-yloxy-phenyl)methanamine × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 2.08 Å
R-free 0.224
|
|
5MOE
Crystal Structure of CK2alpha with N-(3-(((2-chloro-[1,1'-biphenyl]-4-yl)methyl)amino)propyl)methanesulfonamide bound
提交 2016-12-14
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ADP ADENOSINE-5'-DIPHOSPHATE × 1
MG MAGNESIUM ION × 2
IHP INOSITOL HEXAKISPHOSPHATE × 1
ACT ACETATE ION × 4
OQC [3-chloranyl-4-(furan-3-yl)phenyl]methanamine × 3
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.89 Å
R-free 0.208
|
|
5MOE
Crystal Structure of CK2alpha with N-(3-(((2-chloro-[1,1'-biphenyl]-4-yl)methyl)amino)propyl)methanesulfonamide bound
提交 2016-12-14
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ADP ADENOSINE-5'-DIPHOSPHATE × 1
MG MAGNESIUM ION × 2
IHP INOSITOL HEXAKISPHOSPHATE × 1
ACT ACETATE ION × 3
OQC [3-chloranyl-4-(furan-3-yl)phenyl]methanamine × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.89 Å
R-free 0.208
|
|
5MOH
Crystal structure of CK2alpha with ZT0583 bound.
提交 2016-12-14
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
YTX 2-(3-methoxy-4-oxidanyl-phenyl)ethanoic acid × 1
ACT ACETATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 1.38 Å
R-free 0.203
|
|
5MOT
Crystal structure of CK2alpha with ZT0627 bound
提交 2016-12-14
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
HBD 4-HYDROXYBENZAMIDE × 2
ACT ACETATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 2.09 Å
R-free 0.227
|
|
5MOV
Crystal structure of Ck2alpha with ZT0633 bound
提交 2016-12-14
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
3–327(325 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
HC4 4'-HYDROXYCINNAMIC ACID × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 2.20 Å
R-free 0.269
|
|
5MOW
Crystal Structure of CK2alpha with ZT0432 bound
提交 2016-12-14
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
BR9 5-bromopyridine-2,3-diamine × 1
ACT ACETATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.86 Å
R-free 0.204
|
|
5MOW
Crystal Structure of CK2alpha with ZT0432 bound
提交 2016-12-14
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ACT ACETATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.86 Å
R-free 0.204
|
|
5MP8
Crystal Structure of CK2alpha with ZT0432 bound
提交 2016-12-16
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
PO4 PHOSPHATE ION × 3
ADP ADENOSINE-5'-DIPHOSPHATE × 1
ACT ACETATE ION × 1
RKN (3-chloranyl-4-phenyl-phenyl)methyl-methyl-azanium × 1
MG MAGNESIUM ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.92 Å
R-free 0.224
|
|
5MP8
Crystal Structure of CK2alpha with ZT0432 bound
提交 2016-12-16
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
PO4 PHOSPHATE ION × 1
ADP ADENOSINE-5'-DIPHOSPHATE × 1
ACT ACETATE ION × 2
RKN (3-chloranyl-4-phenyl-phenyl)methyl-methyl-azanium × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.92 Å
R-free 0.224
|
|
5MPJ
1-(2-chloro-[1,1'-biphenyl]-4-yl)-N-methylethanamine
提交 2016-12-16
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ADP ADENOSINE-5'-DIPHOSPHATE × 1
IHP INOSITOL HEXAKISPHOSPHATE × 1
J2P (3-chloranyl-4-phenyl-phenyl)methyl-ethyl-azanium × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 2.14 Å
R-free 0.241
|
|
5MPJ
1-(2-chloro-[1,1'-biphenyl]-4-yl)-N-methylethanamine
提交 2016-12-16
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
未记录非水小分子
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 2.14 Å
R-free 0.241
|
|
5N1V
Crystal structure of the protein kinase CK2 catalytic subunit in complex with pyrazolo-pyrimidine macrocyclic ligand
提交 2017-02-06
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–336(336 aa)
|
未记录
|
SO4 SULFATE ION × 5
EDO 1,2-ETHANEDIOL × 7
8GQ pyrazolo-pyrimidine macrocycle × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;unknown
|
分辨率 2.52 Å
R-free 0.229
|
|
5N1V
Crystal structure of the protein kinase CK2 catalytic subunit in complex with pyrazolo-pyrimidine macrocyclic ligand
提交 2017-02-06
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–336(336 aa)
|
未记录
|
SO4 SULFATE ION × 2
EDO 1,2-ETHANEDIOL × 9
8GQ pyrazolo-pyrimidine macrocycle × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;unknown
|
分辨率 2.52 Å
R-free 0.229
|
|
5N9K
Crystal structure of human Protein kinase CK2 catalytic subunit in complex with the ATP-competitive, tight-binding dibenzofuran inhibitor TF107 (5)
提交 2017-02-25
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
突变:Deletion of C-terminal residues 336-391
|
8QK 1,3-bis(chloranyl)-6-[(~{E})-(4-methoxyphenyl)iminomethyl]dibenzofuran-2,7-diol × 1
ACT ACETATE ION × 6
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.6;293 K;Prior to the crystallization the inhibitor was solubilized in 100 % DMSO in a concentration of 10 mM. Then, this inhibitor stock solution was mixed in a Ratio of 1:10 with human CK2alpha (construct 1-335; solved with a Protein concentration of 8-10 mg/ml in 500 mM sodium chloride, 25 mM Tris/HCl pH 8.5).
After a short time of incubation this mixture were mixed with reservoir solution [32 % (w/v) PEG4000, 0.2 M ammonium acetate, 0.1 M citrate pH 5.6] in a ratio of 2.5:1. 3.5 microliter of this final mixture was then equilibrated against the reservoir solution. The crystal growth was induced by seeding with 150 nanoliter seed suspension after an equilibration time of two days.
|
分辨率 1.64 Å
R-free 0.184
|
|
5N9L
Crystal structure of human Protein kinase CK2 catalytic subunit in complex with the ATP-competitive dibenzofuran inhibitor TF (4b)
提交 2017-02-25
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
8QH (4~{Z})-6,7-bis(chloranyl)-4-[[(4-methylphenyl)amino]methylidene]-8-oxidanyl-1,2-dihydrodibenzofuran-3-one × 1
ACT ACETATE ION × 2
GOL GLYCEROL × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.6;293 K;Prior to the crystallization TF was solubilized in 100 % DMSO in a concentration of 10 mM. TF was mixed with human CK2alpha (construct 1-335; 8-10 mg/ml in 500 mM sodium chloride, 25 mM Tris/HCl pH 8.5) in a ratio of 1:5. After a short time of incubation this mixture was mixed with reservoir solution [32 % (w/v) PEG4000, 0.2 M ammonium acetate, 0.1 M citrate pH 5.6] in a ratio of 5:2. 3.5 microliter of the resulting mixture was then equilibrated against the reservoir solution. The crystal growth was induced by seeding with 150 nanoliter seed suspension after an equilibration time of two days.
|
分辨率 1.79 Å
R-free 0.199
|
|
5N9N
Crystal structure of human Protein kinase CK2 catalytic subunit in complex with the ATP-competitive, tight-binding dibenzofuran inhibitor TF85 (4a)
提交 2017-02-25
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
片段:UNP residues 1-335
|
未记录
|
KC5 (4~{Z})-7,9-bis(chloranyl)-4-[[(4-methoxyphenyl)amino]methylidene]-8-oxidanyl-1,2-dihydrodibenzofuran-3-one × 1
ACT ACETATE ION × 5
GOL GLYCEROL × 5
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.6;293 K;Prior to the crystallization the Inhibitor TF85 was solubilized in 100 % DMSO in a concentration of 10 mM. This TF85 stock solution was mixed with human CK2alpha (construct 1-335; Protein concentration 8-10 mg/ml in 500 mM sodium chloride, 25 mM Tris/HCl pH 8.5) in a ratio of 1:10. After a short time of incubation, this mixture was mixed with reservoir solution [32 % (w/v) PEG4000, 0.2 M ammonium acetate, 0.1 M citrate pH 5.6] in a ratio of 5:2. 3.5 microliter of these mixtures were then equilibrated against the reservoir solution. The crystal growth was induced by seeding with 150 nanoliter seeding suspension after an equilibration time of two days.
|
分辨率 1.84 Å
R-free 0.201
|
|
5NQC
CK2alpha in complex with NMR154
提交 2017-04-19
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–335(334 aa)
|
未记录
|
1KP (3E)-6,7-dichloro-3-(hydroxyimino)-1,3-dihydro-2H-indol-2-one × 2
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;292 K;0.1 M sodium tartrate pH 5.6, 2.2 M (NH4)2SO4, 0.2 M NaSCN, 5 mM TCEP, 5 mM NMR154, 5% (v/v) DMSO
|
分辨率 2.00 Å
R-free 0.247
|
|
5OMY
HIGH-SALT STRUCTURE OF PROTEIN KINASE CK2 CATALYTIC SUBUNIT (ISOFORM CK2ALPHA) IN COMPLEX WITH THE INDENOINDOLE-TYPE INHIBITOR 4P
提交 2017-08-02
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–391(391 aa)
|
未记录
|
9YE 4-(3-methylbut-2-enoxy)-5-propan-2-yl-7,8-dihydro-6~{H}-indeno[1,2-b]indole-9,10-dione × 1
CL CHLORIDE ION × 5
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293.15 K;90 MIKROLITER ENZYME STOCK SOLUTION (6
MG/ML IN 500 MM NACL, 25 MM TRIS/HCL, PH 8.5) WAS MIXED WITH 10
MIKROLITER 4P STOCK SOLUTION (10 MM 4P IN DMSO). THIS
MIXTURE WAS INCUBATED FOR 30 MIN AT ROOM TEMPERATURE. THE
RESERVOIR SOLUTION OF THE CRYSTALLIZATION EXPERIMENT WAS 4.2 M
NACL, 0.1 M CITRIC ACID, PH 5.5. PRIOR TO EQUILIBRATION THE
CRYSTALLIZATION DROP WAS COMPOSED OF 1 MIKROLITER RESERVOIR
SOLUTION PLUS 1 MIKROLITER ENZYME/4P MIXTURE., VAPOR DIFFUSION,
SITTING DROP, TEMPERATURE 293.15K
|
分辨率 1.95 Å
R-free 0.221
|
|
5ONI
LOW-SALT STRUCTURE OF PROTEIN KINASE CK2 CATALYTIC SUBUNIT (ISOFORM CK2ALPHA) IN COMPLEX WITH THE INDENOINDOLE-TYPE INHIBITOR 4P
提交 2017-08-03
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–391(391 aa)
|
突变:C-terminal deletion from Ser336 to Gln391
|
9YE 4-(3-methylbut-2-enoxy)-5-propan-2-yl-7,8-dihydro-6~{H}-indeno[1,2-b]indole-9,10-dione × 1
SO4 SULFATE ION × 5
NA SODIUM ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;90 MICROLITER ENZYME STOCK SOLUTION (6 MG/ML IN 500 MM NACL, 25 MM
TRIS/HCL, PH 8.5) WAS MIXED WITH 10 MIKROLITER 4P STOCK
SOLUTION (10 MM 4P IN DMSO). THIS MIXTURE WAS INCUBATED FOR 30
MIN AT ROOM TEMPERATURE. THE RESERVOIR SOLUTION OF THE
CRYSTALLIZATION EXPERIMENT WAS 25 % (W/V) PEG5000, 0.2 M
AMMONIUM SULPHATE, 0.1 M MES BUFFER, PH 6.5. PRIOR TO
EQUILIBRATION THE CRYSTALLIZATION DROP WAS COMPOSED OF 1
MICROLITER RESERVOIR SOLUTION PLUS 1 MICROLITER ENZYME/4P
MIXTURE., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K
|
分辨率 2.00 Å
R-free 0.204
|
|
5ONI
LOW-SALT STRUCTURE OF PROTEIN KINASE CK2 CATALYTIC SUBUNIT (ISOFORM CK2ALPHA) IN COMPLEX WITH THE INDENOINDOLE-TYPE INHIBITOR 4P
提交 2017-08-03
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–391(391 aa)
|
突变:C-terminal deletion from Ser336 to Gln391
|
9YE 4-(3-methylbut-2-enoxy)-5-propan-2-yl-7,8-dihydro-6~{H}-indeno[1,2-b]indole-9,10-dione × 1
SO4 SULFATE ION × 5
CL CHLORIDE ION × 2
BU1 1,4-BUTANEDIOL × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;90 MICROLITER ENZYME STOCK SOLUTION (6 MG/ML IN 500 MM NACL, 25 MM
TRIS/HCL, PH 8.5) WAS MIXED WITH 10 MIKROLITER 4P STOCK
SOLUTION (10 MM 4P IN DMSO). THIS MIXTURE WAS INCUBATED FOR 30
MIN AT ROOM TEMPERATURE. THE RESERVOIR SOLUTION OF THE
CRYSTALLIZATION EXPERIMENT WAS 25 % (W/V) PEG5000, 0.2 M
AMMONIUM SULPHATE, 0.1 M MES BUFFER, PH 6.5. PRIOR TO
EQUILIBRATION THE CRYSTALLIZATION DROP WAS COMPOSED OF 1
MICROLITER RESERVOIR SOLUTION PLUS 1 MICROLITER ENZYME/4P
MIXTURE., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K
|
分辨率 2.00 Å
R-free 0.204
|
|
5OQU
The crystal structure of CK2alpha in complex with compound 5
提交 2017-08-14
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白同源多聚体
同源多聚体;蛋白 × 2
PDB 声明:dimeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
突变:R21S
|
ADP ADENOSINE-5'-DIPHOSPHATE × 2
ACT ACETATE ION × 5
A4B [3-chloranyl-4-(2-methoxyphenyl)phenyl]methanamine × 1
MG MAGNESIUM ION × 2
IHP INOSITOL HEXAKISPHOSPHATE × 1
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 2.32 Å
R-free 0.244
|
|
5ORH
The crystal structure of CK2alpha in complex with compound 2
提交 2017-08-16
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
A4N [3-chloranyl-4-(2-methylphenyl)phenyl]methanamine × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.75 Å
R-free 0.227
|
|
5ORH
The crystal structure of CK2alpha in complex with compound 2
提交 2017-08-16
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
A4N [3-chloranyl-4-(2-methylphenyl)phenyl]methanamine × 2
ACT ACETATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.75 Å
R-free 0.227
|
|
5ORJ
The crystal structure of CK2alpha in complex with compound 3
提交 2017-08-16
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白同源多聚体
同源多聚体;蛋白 × 2
PDB 声明:dimeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
突变:R21S
|
MG MAGNESIUM ION × 5
ADP ADENOSINE-5'-DIPHOSPHATE × 2
A4Q [3-chloranyl-4-(2-ethylphenyl)phenyl]methanamine × 3
IHP INOSITOL HEXAKISPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.99 Å
R-free 0.221
|
|
5ORK
The crystal structure of CK2alpha in complex with compound 6
提交 2017-08-16
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白同源多聚体
同源多聚体;蛋白 × 2
PDB 声明:dimeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
突变:R21S
|
ADP ADENOSINE-5'-DIPHOSPHATE × 2
MG MAGNESIUM ION × 2
A4T [3-chloranyl-4-(2-fluorophenyl)phenyl]methanamine × 1
CL CHLORIDE ION × 1
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 2.14 Å
R-free 0.243
|
|
5OS7
The crystal structure of CK2alpha in complex with compound 4
提交 2017-08-17
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ACT ACETATE ION × 1
A8Q [3-chloranyl-4-(2-propan-2-ylphenyl)phenyl]methylazanium × 1
ATP ADENOSINE-5'-TRIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.66 Å
R-free 0.247
|
|
5OS7
The crystal structure of CK2alpha in complex with compound 4
提交 2017-08-17
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ACT ACETATE ION × 3
A8Q [3-chloranyl-4-(2-propan-2-ylphenyl)phenyl]methylazanium × 2
ATP ADENOSINE-5'-TRIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.66 Å
R-free 0.247
|
|
5OS8
The crystal structure of CK2alpha in complex with compound 11
提交 2017-08-17
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
ACT ACETATE ION × 2
DMS DIMETHYL SULFOXIDE × 1
J27 [3-chloranyl-4-(4-fluoranyl-2-methyl-phenyl)phenyl]methylazanium × 3
ATP ADENOSINE-5'-TRIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.55 Å
R-free 0.201
|
|
5OSL
The crystal structure of CK2alpha in complex with compound 7
提交 2017-08-17
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
ACT ACETATE ION × 2
ADP ADENOSINE-5'-DIPHOSPHATE × 1
MG MAGNESIUM ION × 2
A9K 2-[4-(aminomethyl)-2-chloranyl-phenyl]phenol × 2
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.95 Å
R-free 0.211
|
|
5OSP
The crystal structure of CK2alpha in complex with an analogue of compound 1
提交 2017-08-18
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 1
ACT ACETATE ION × 4
A9W [3-chloranyl-4-(5-methyl-2-oxidanyl-phenyl)phenyl]methylazanium × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.91 Å
R-free 0.213
|
|
5OSR
The crystal structure of CK2alpha in complex with an analogue of compound 1
提交 2017-08-18
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
ACT ACETATE ION × 2
ATP ADENOSINE-5'-TRIPHOSPHATE × 1
AFK [3-chloranyl-4-(2-methoxy-5-methyl-phenyl)phenyl]methanamine × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.57 Å
R-free 0.209
|
|
5OSU
The crystal structure of CK2alpha in complex with analogues of compound 1
提交 2017-08-18
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
ACT ACETATE ION × 1
AFW [3-chloranyl-4-[2-methoxy-5-(trifluoromethyl)phenyl]phenyl]methanamine × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.63 Å
R-free 0.210
|
|
5OSZ
The crystal structure of CK2alpha in complex with compound 23
提交 2017-08-18
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
ACT ACETATE ION × 2
AHK 2-(1~{H}-benzimidazol-2-yl)ethyl-[[3-chloranyl-4-(2-ethylphenyl)phenyl]methyl]azanium × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 2.00 Å
R-free 0.241
|
|
5OT5
The crystal structure of CK2alpha in complex with compound 24
提交 2017-08-21
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白同源多聚体
同源多聚体;蛋白 × 2
PDB 声明:dimeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
突变:R21S
|
ACT ACETATE ION × 6
AWK ~{N}-[[3-chloranyl-4-(2-ethylphenyl)phenyl]methyl]-2-(7-methyl-1~{H}-benzimidazol-2-yl)ethanamine × 2
PO4 PHOSPHATE ION × 2
PEG DI(HYDROXYETHYL)ETHER × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.63 Å
R-free 0.239
|
|
5OT6
The crystal structure of CK2alpha in complex with compound 19
提交 2017-08-21
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ACT ACETATE ION × 2
AJK (3-chloranyl-4-phenyl-phenyl)methyl-[2-(1~{H}-pyrrol-2-yl)ethyl]azanium × 1
PO4 PHOSPHATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.94 Å
R-free 0.241
|
|
5OT6
The crystal structure of CK2alpha in complex with compound 19
提交 2017-08-21
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.94 Å
R-free 0.241
|
|
5OTD
The crystal structure of CK2alpha in complex with compound 25
提交 2017-08-21
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白同源多聚体
同源多聚体;蛋白 × 2
PDB 声明:dimeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
突变:R21S
|
ACT ACETATE ION × 4
AOW N-{[(1M)-2-chloro-2'-ethyl[1,1'-biphenyl]-4-yl]methyl}-2-(7-nitro-1H-1,3-benzimidazol-2-yl)ethan-1-amine × 2
PO4 PHOSPHATE ION × 2
PEG DI(HYDROXYETHYL)ETHER × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.57 Å
R-free 0.261
|
|
5OTH
The crystal structure of CK2alpha in complex with compound 26
提交 2017-08-22
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白同源多聚体
同源多聚体;蛋白 × 2
PDB 声明:dimeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
突变:R21S
|
ACT ACETATE ION × 4
PO4 PHOSPHATE ION × 2
DMS DIMETHYL SULFOXIDE × 1
AQ8 ~{N}-[[3-chloranyl-4-(2-ethylphenyl)phenyl]methyl]-2-(4-methoxy-1~{H}-benzimidazol-2-yl)ethanamine × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.69 Å
R-free 0.265
|
|
5OTI
The crystal structure of CK2alpha in complex with compound 27
提交 2017-08-22
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
ACT ACETATE ION × 3
AOK ~{N}-[[3-chloranyl-4-(2-ethylphenyl)phenyl]methyl]-2-(5-methyl-1~{H}-benzimidazol-2-yl)ethanamine × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.59 Å
R-free 0.232
|
|
5OTL
The crystal structure of CK2alpha in complex with compound 29
提交 2017-08-22
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白同源多聚体
同源多聚体;蛋白 × 2
PDB 声明:dimeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
突变:R21S
|
ACT ACETATE ION × 4
AQT ~{N}-[[3-chloranyl-4-(2-ethylphenyl)phenyl]methyl]-2-(5-methoxy-1~{H}-benzimidazol-2-yl)ethanamine × 2
PO4 PHOSPHATE ION × 3
PEG DI(HYDROXYETHYL)ETHER × 1
DMS DIMETHYL SULFOXIDE × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.57 Å
R-free 0.244
|
|
5OTO
The crystal structure of CK2alpha in complex with compound 30
提交 2017-08-22
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白同源多聚体
同源多聚体;蛋白 × 2
PDB 声明:dimeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
突变:R21S
|
ACT ACETATE ION × 7
AQW 2-(5-chloranyl-1~{H}-benzimidazol-2-yl)-~{N}-[[3-chloranyl-4-(2-ethylphenyl)phenyl]methyl]ethanamine × 2
PO4 PHOSPHATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.51 Å
R-free 0.253
|
|
5OTP
The crystal structure of CK2alpha in complex with an analogue of compound 22
提交 2017-08-22
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白同源多聚体
同源多聚体;蛋白 × 2
PDB 声明:dimeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
突变:R21S
|
ACT ACETATE ION × 6
DMS DIMETHYL SULFOXIDE × 1
AT8 2-[5,6-bis(chloranyl)-1~{H}-benzimidazol-2-yl]-~{N}-[[3-chloranyl-4-(2-ethylphenyl)phenyl]methyl]ethanamine × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.57 Å
R-free 0.240
|
|
5OTQ
The crystal structure of CK2alpha in complex with compound 33
提交 2017-08-22
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
ACT ACETATE ION × 2
AUH 2-(1~{H}-benzimidazol-2-yl)-~{N}-[[4-(2-ethylphenyl)-3-methoxy-phenyl]methyl]ethanamine × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.38 Å
R-free 0.198
|
|
5OTR
The crystal structure of CK2alpha in complex with compound 14
提交 2017-08-22
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
ACT ACETATE ION × 2
AU8 [3,5-bis(chloranyl)-4-phenyl-phenyl]methylazanium × 3
ATP ADENOSINE-5'-TRIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.52 Å
R-free 0.202
|
|
5OTS
The crystal structure of CK2alpha in complex with an analogue of compound 22
提交 2017-08-22
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
AU2 2-(1~{H}-benzimidazol-2-yl)ethyl-[[3,5-bis(chloranyl)-4-phenyl-phenyl]methyl]azanium × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.90 Å
R-free 0.245
|
|
5OTY
The crystal structure of CK2alpha in complex with CAM4712
提交 2017-08-22
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
ACT ACETATE ION × 3
TFA trifluoroacetic acid × 1
AUW 2-(1~{H}-benzimidazol-2-yl)-~{N}-[[3,5-bis(chloranyl)-4-(2-ethylphenyl)phenyl]methyl]ethanamine × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.48 Å
R-free 0.192
|
|
5OTZ
The crystal structure of CK2alpha in complex with compound 1
提交 2017-08-22
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
ACT ACETATE ION × 2
TFA trifluoroacetic acid × 1
AUT [3,5-bis(chloranyl)-4-(2-ethylphenyl)phenyl]methanamine × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.46 Å
R-free 0.211
|
|
5OUE
The crystal structure of CK2alpha in complex with compound 20
提交 2017-08-23
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ACT ACETATE ION × 1
AW5 3-methyl-5-oxidanyl-benzoic acid × 1
AVZ (3-chloranyl-4-phenyl-phenyl)methyl-[2-(1~{H}-imidazol-4-yl)ethyl]azanium × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 2.01 Å
R-free 0.220
|
|
5OUE
The crystal structure of CK2alpha in complex with compound 20
提交 2017-08-23
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ACT ACETATE ION × 1
AVZ (3-chloranyl-4-phenyl-phenyl)methyl-[2-(1~{H}-imidazol-4-yl)ethyl]azanium × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 2.01 Å
R-free 0.220
|
|
5OUL
The crystal structure of CK2alpha in complex with compound 9
提交 2017-08-24
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
ACT ACETATE ION × 2
AWE [3-chloranyl-4-(3-fluorophenyl)phenyl]methanamine × 6
TFA trifluoroacetic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.34 Å
R-free 0.222
|
|
5OUM
The crystal structure of CK2alpha in complex with compound 21
提交 2017-08-24
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白同源多聚体
同源多聚体;蛋白 × 2
PDB 声明:dimeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
突变:R21S
|
ACT ACETATE ION × 3
AVK ~{N}-[(3-chloranyl-4-phenyl-phenyl)methyl]-2-(1~{H}-imidazol-2-yl)ethanamine × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 2.05 Å
R-free 0.248
|
|
5OUU
The crystal structure of CK2alpha in complex with compound 22
提交 2017-08-25
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白同源多聚体
同源多聚体;蛋白 × 2
PDB 声明:dimeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
突变:R21S
|
ACT ACETATE ION × 3
AWN 2-(1~{H}-benzimidazol-2-yl)-~{N}-[(3-chloranyl-4-phenyl-phenyl)methyl]ethanamine × 2
PO4 PHOSPHATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.81 Å
R-free 0.203
|
|
5OWH
High salt structure of human protein kinase CK2alpha in complex with 3-aminopropyl-4,5,6,7-tetrabromobenzimidazol
提交 2017-09-01
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
B0K 3-[4,5,6,7-tetrakis(bromanyl)benzimidazol-1-yl]propan-1-amine × 1
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293.15 K;1 MIKROLITER OF A CK2ALPHA/INHIBITOR MIXTURE (COMPOSITION: 7 MG/ML CK2ALPHA ENZYME, 1 MILLIMOLAR
INHIBITOR, 10 % DIMETHYL SULFOXIDE, 450 MM NACL, 22.5 MM TRIS/HCL, PH 8.5) WAS MIXED WITH 1 MIKROLITER RESERVOIR SOLUTION (COMPOSITION: 4.4 M sodium chloride, 0.1 M SODIUM Acetate, PH 5.5) FOLLOWED BY VAPOUR DIFFUSION EQUILIBRATION AGAINST MICROLITER OF THE RESERVOIR SOLUTION.
|
分辨率 2.30 Å
R-free 0.263
|
|
5OWL
Low salt structure of human protein kinase CK2alpha in complex with 3-aminopropyl-4,5,6,7-tetrabromobenzimidazol
提交 2017-09-01
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
B0K 3-[4,5,6,7-tetrakis(bromanyl)benzimidazol-1-yl]propan-1-amine × 1
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293.15 K;1 MIKROLITER OF THE CK2ALPHA/INHIBITOR MIXTURE (COMPOSITION: 7 MG/ML CK2ALPHA ENZYME, 1 MILLIMOLAR INHIBITOR, 10 % DIMETHYL SULFOXIDE, 450 MM NACL, 22.5 MM TRIS/HCL, PH 8.5) WAS MIXED WITH 1 MIKROLITER RESERVOIR SOLUTION (COMPOSITION: 25 % PEG3350, 0.2 M AMMONIUM SULPHATE, 0.1 M BIS-TRIS BUFFER, PH 5.5) FOLLOWED BY VAPOUR DIFFUSION EQUILIBRATION AGAINST THE RESERVOIR SOLUTION.
|
分辨率 2.23 Å
R-free 0.249
|
|
5OWL
Low salt structure of human protein kinase CK2alpha in complex with 3-aminopropyl-4,5,6,7-tetrabromobenzimidazol
提交 2017-09-01
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–335(335 aa)
|
未记录
|
B0K 3-[4,5,6,7-tetrakis(bromanyl)benzimidazol-1-yl]propan-1-amine × 1
SO4 SULFATE ION × 3
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293.15 K;1 MIKROLITER OF THE CK2ALPHA/INHIBITOR MIXTURE (COMPOSITION: 7 MG/ML CK2ALPHA ENZYME, 1 MILLIMOLAR INHIBITOR, 10 % DIMETHYL SULFOXIDE, 450 MM NACL, 22.5 MM TRIS/HCL, PH 8.5) WAS MIXED WITH 1 MIKROLITER RESERVOIR SOLUTION (COMPOSITION: 25 % PEG3350, 0.2 M AMMONIUM SULPHATE, 0.1 M BIS-TRIS BUFFER, PH 5.5) FOLLOWED BY VAPOUR DIFFUSION EQUILIBRATION AGAINST THE RESERVOIR SOLUTION.
|
分辨率 2.23 Å
R-free 0.249
|
|
5OYF
The crystal structure of CK2alpha in complex with compound 31
提交 2017-09-08
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
B4Q 2-(1~{H}-benzimidazol-2-yl)-~{N}-[[4-(2-ethylphenyl)-3-methyl-phenyl]methyl]ethanamine × 2
ACT ACETATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.54 Å
R-free 0.216
|
|
5T1H
Crystal structure of CK2
提交 2016-08-19
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–333(333 aa)
|
未记录
|
SO4 SULFATE ION × 7
EDO 1,2-ETHANEDIOL × 12
75E 7-(cyclopropylamino)-5-[3-(6-oxo-1,6-dihydropyridin-3-yl)thiophen-2-yl]pyrazolo[1,5-a]pyrimidine-3-carbonitrile × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;22-26% PEG 6K, 200 mM ammonium sulfate, 100 mM MES
|
分辨率 2.11 Å
R-free 0.203
|
|
5T1H
Crystal structure of CK2
提交 2016-08-19
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–333(333 aa)
|
未记录
|
SO4 SULFATE ION × 6
EDO 1,2-ETHANEDIOL × 14
75E 7-(cyclopropylamino)-5-[3-(6-oxo-1,6-dihydropyridin-3-yl)thiophen-2-yl]pyrazolo[1,5-a]pyrimidine-3-carbonitrile × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;22-26% PEG 6K, 200 mM ammonium sulfate, 100 mM MES
|
分辨率 2.11 Å
R-free 0.203
|
|
5T1H
Crystal structure of CK2
提交 2016-08-19
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 3
蛋白同源多聚体
同源多聚体;蛋白 × 2
PDB 声明:dimeric
|
链 A
1–333(333 aa)
链 B
1–333(333 aa)
|
未记录
|
SO4 SULFATE ION × 13
EDO 1,2-ETHANEDIOL × 26
75E 7-(cyclopropylamino)-5-[3-(6-oxo-1,6-dihydropyridin-3-yl)thiophen-2-yl]pyrazolo[1,5-a]pyrimidine-3-carbonitrile × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;22-26% PEG 6K, 200 mM ammonium sulfate, 100 mM MES
|
分辨率 2.11 Å
R-free 0.203
|
|
5T1H
Crystal structure of CK2
提交 2016-08-19
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 4
蛋白同源多聚体
同源多聚体;蛋白 × 2
PDB 声明:dimeric
|
链 A
1–333(333 aa)
链 B
1–333(333 aa)
|
未记录
|
SO4 SULFATE ION × 13
EDO 1,2-ETHANEDIOL × 26
75E 7-(cyclopropylamino)-5-[3-(6-oxo-1,6-dihydropyridin-3-yl)thiophen-2-yl]pyrazolo[1,5-a]pyrimidine-3-carbonitrile × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;22-26% PEG 6K, 200 mM ammonium sulfate, 100 mM MES
|
分辨率 2.11 Å
R-free 0.203
|
|
5ZN0
Joint X-ray/neutron structure of protein kinase ck2 alpha subunit
提交 2018-04-07
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验方法不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–329(329 aa)
|
突变:C147A,C220A
|
SO4 SULFATE ION × 2
|
实验方法未声明
X-ray结晶条件
VAPOR DIFFUSION;pH 8.5;293 K;0.1M Tris-HCl, 0.85M ammonium sulfate, 5% acetonitrile, 2mM DTT
|
分辨率未提供
|
|
5ZN1
X-ray structure of protein kinase ck2 alpha subunit in D2O
提交 2018-04-07
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–329(329 aa)
|
突变:C147A,C220A
|
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 8.5;293 K;0.1M Tris-HCl, 1.2M ammonium sulfate, 5% acetonitrile, 2mM DTT
|
分辨率 1.05 Å
R-free 0.180
|
|
5ZN2
X-ray structure of protein kinase ck2 alpha subunit H148A mutant
提交 2018-04-07
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–329(329 aa)
|
突变:C147A,H148A,C220A
|
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;293 K;0.1M Tris-HCl, 1.2M ammonium sulfate, 5% acetonitrile, 2mM DTT
|
分辨率 1.20 Å
R-free 0.181
|
|
5ZN3
X-ray structure of protein kinase ck2 alpha subunit H148S mutant
提交 2018-04-07
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–329(329 aa)
|
突变:C147A,H148S,C220A
|
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;293 K;0.1M Tris-HCl, 1.2M ammonium sulfate, 5% acetonitrile, 2mM DTT
|
分辨率 1.50 Å
R-free 0.230
|
|
5ZN4
X-ray structure of protein kinase ck2 alpha subunit H148N mutant
提交 2018-04-07
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–329(329 aa)
|
突变:C147A,H148N,C220A
|
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;293 K;0.1M Tris-HCl, 1.2M ammonium sulfate, 5% acetonitrile, 2mM DTT
|
分辨率 1.65 Å
R-free 0.239
|
|
5ZN5
X-ray structure of protein kinase ck2 alpha subunit H148A mutant
提交 2018-04-07
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–329(329 aa)
|
未记录
|
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;293 K;0.1M Tris-HCl, 1.2M ammonium sulfate, 5% acetonitrile, 2mM DTT
|
分辨率 1.70 Å
R-free 0.222
|
|
6A1C
Crystal structure of the CK2a1-go289 complex
提交 2018-06-07
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
9NX 5-bromanyl-2-methoxy-4-[(E)-(3-methylsulfanyl-5-phenyl-1,2,4-triazol-4-yl)iminomethyl]phenol × 1
NA SODIUM ION × 1
EDO 1,2-ETHANEDIOL × 26
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;277 K;ethyleneglycol
|
分辨率 1.68 Å
R-free 0.196
|
|
6EHK
The crystal structure of CK2alpha in complex with CAM4712 and compound 37
提交 2017-09-13
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
ACT ACETATE ION × 2
AUW 2-(1~{H}-benzimidazol-2-yl)-~{N}-[[3,5-bis(chloranyl)-4-(2-ethylphenyl)phenyl]methyl]ethanamine × 1
54G 2-hydroxy-5-methylbenzoic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.40 Å
R-free 0.194
|
|
6EHU
The crystal structure of CK2alpha in complex with compound 32
提交 2017-09-15
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
B5E 2-(1~{H}-benzimidazol-2-yl)-~{N}-[[4-(2-ethylphenyl)-3-(trifluoromethyl)phenyl]methyl]ethanamine × 3
ACT ACETATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.95 Å
R-free 0.218
|
|
6EHU
The crystal structure of CK2alpha in complex with compound 32
提交 2017-09-15
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
B5E 2-(1~{H}-benzimidazol-2-yl)-~{N}-[[4-(2-ethylphenyl)-3-(trifluoromethyl)phenyl]methyl]ethanamine × 3
ACT ACETATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.95 Å
R-free 0.218
|
|
6EII
The crystal structure of CK2alpha in complex with compound 18
提交 2017-09-19
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ACT ACETATE ION × 2
PO4 PHOSPHATE ION × 2
B5W (3-chloranyl-4-phenyl-phenyl)methyl-(3-phenylpropyl)azanium × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.94 Å
R-free 0.234
|
|
6EII
The crystal structure of CK2alpha in complex with compound 18
提交 2017-09-19
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ACT ACETATE ION × 2
PO4 PHOSPHATE ION × 2
B5W (3-chloranyl-4-phenyl-phenyl)methyl-(3-phenylpropyl)azanium × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.94 Å
R-free 0.234
|
|
6FVF
The Structure of CK2alpha with CCh503 bound
提交 2018-03-02
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
503 [1-[2-(phenylsulfonylamino)ethyl]piperidin-4-yl]methyl 5-fluoranyl-2-methoxy-1~{H}-indole-3-carboxylate × 1
ATP ADENOSINE-5'-TRIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.47 Å
R-free 0.222
|
|
6FVG
The Structure of CK2alpha with CCh507 bound
提交 2018-03-02
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
E8K [1-[2-(phenylsulfonylamino)ethyl]piperidin-4-yl]methyl 1~{H}-indole-3-carboxylate × 1
ATP ADENOSINE-5'-TRIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.60 Å
R-free 0.229
|
|
6GIH
Crystal Structure of CK2alpha with CAM187 bound
提交 2018-05-11
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329
|
突变:R21S, K74A, K75A, K76A
|
ACT ACETATE ION × 2
EZN [3-chloranyl-5-(1~{H}-indol-4-yl)phenyl]methanamine × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.96 Å
R-free 0.215
|
|
6GMD
The crystal structure of CK2alpha in complex with compound 3
提交 2018-05-25
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ACT ACETATE ION × 1
A8Q [3-chloranyl-4-(2-propan-2-ylphenyl)phenyl]methylazanium × 1
ATP ADENOSINE-5'-TRIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.66 Å
R-free 0.247
|
|
6GMD
The crystal structure of CK2alpha in complex with compound 3
提交 2018-05-25
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
ACT ACETATE ION × 3
A8Q [3-chloranyl-4-(2-propan-2-ylphenyl)phenyl]methylazanium × 2
ATP ADENOSINE-5'-TRIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.66 Å
R-free 0.247
|
|
6HBN
HIGH-SALT STRUCTURE OF PROTEIN KINASE CK2 CATALYTIC SUBUNIT (ISOFORM CK2ALPHA/CSKN2A1 GENE PRODUCT) IN COMPLEX WITH THE INDENOINDOLE-TYPE INHIBITOR THN27
提交 2018-08-10
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
CL CHLORIDE ION × 5
FXB 5-propan-2-yl-4-prop-2-enoxy-7,8-dihydro-6~{H}-indeno[1,2-b]indole-9,10-dione × 1
NA SODIUM ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;293.15 K;90 MIKROLITER ENZYME STOCK SOLUTION (6 MG/ML IN 500 MM NACL, 25 MM TRIS/HCL, PH 8.5) WAS MIXED WITH 10 MIKROLITER INHIBITOR STOCK SOLUTION (10 MM INHIBITOR IN DMSO). THIS MIXTURE WAS INCUBATED FOR 30 MIN AT ROOM TEMPERATURE. THE RESERVOIR SOLUTION OF THE CRYSTALLIZATION EXPERIMENT WAS 4.4 M NACL, 0.1 M CITRIC ACID, PH 5.5. PRIOR TO EQUILIBRATION THE CRYSTALLIZATION DROP WAS COMPOSED OF 1 MIKROLITER RESERVOIR SOLUTION PLUS 1 MIKROLITER ENZYME/INHIBITOR MIXTURE.,VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K
|
分辨率 1.59 Å
R-free 0.217
|
|
6HBN
HIGH-SALT STRUCTURE OF PROTEIN KINASE CK2 CATALYTIC SUBUNIT (ISOFORM CK2ALPHA/CSKN2A1 GENE PRODUCT) IN COMPLEX WITH THE INDENOINDOLE-TYPE INHIBITOR THN27
提交 2018-08-10
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–335(335 aa)
|
未记录
|
CL CHLORIDE ION × 5
FXB 5-propan-2-yl-4-prop-2-enoxy-7,8-dihydro-6~{H}-indeno[1,2-b]indole-9,10-dione × 1
NA SODIUM ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;293.15 K;90 MIKROLITER ENZYME STOCK SOLUTION (6 MG/ML IN 500 MM NACL, 25 MM TRIS/HCL, PH 8.5) WAS MIXED WITH 10 MIKROLITER INHIBITOR STOCK SOLUTION (10 MM INHIBITOR IN DMSO). THIS MIXTURE WAS INCUBATED FOR 30 MIN AT ROOM TEMPERATURE. THE RESERVOIR SOLUTION OF THE CRYSTALLIZATION EXPERIMENT WAS 4.4 M NACL, 0.1 M CITRIC ACID, PH 5.5. PRIOR TO EQUILIBRATION THE CRYSTALLIZATION DROP WAS COMPOSED OF 1 MIKROLITER RESERVOIR SOLUTION PLUS 1 MIKROLITER ENZYME/INHIBITOR MIXTURE.,VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K
|
分辨率 1.59 Å
R-free 0.217
|
|
6HME
LOW-SALT STRUCTURE OF PROTEIN KINASE CK2 CATALYTIC SUBUNIT (ISOFORM CK2ALPHA; CSNK2A1 gene product) IN COMPLEX WITH THE INDENOINDOLE-TYPE INHIBITOR THN27
提交 2018-09-12
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
EDO 1,2-ETHANEDIOL × 3
CL CHLORIDE ION × 1
SO4 SULFATE ION × 5
FXB 5-propan-2-yl-4-prop-2-enoxy-7,8-dihydro-6~{H}-indeno[1,2-b]indole-9,10-dione × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293.15 K;180 MICROLITERS OF ENZYME SOLUTION (6 MG/ML CK2ALPHA, 0.025 M TRIS/HCL, PH 8.5, 0.5 M NACL) WERE MIXED WITH 20 MICROLITERS OF INHIBITOR STOCK SOLUTION (0.010 M INHIBITOR THN27 IN DMSO). THIS MIXTURE WAS INCUBATED FOR 30 MIN AT ROOM TEMPERATURE. THE RESERVOIR SOLUTION OF THE CRYSTALLIZATION EXPERIMENT WAS 0.2 M AMMONIUM SULFATE, 0.1 M SODIUM CACODYLATE TRIHYDRATE, PH 6.5, 30% (W/V) PEG 8,000. PRIOR TO EQUILIBRATION THE CRYSTALLIZATION DROP WAS COMPOSED OF 10 MICROLITERS RESERVOIR SOLUTION PLUS 20 MICROLITERS ENZYME/INHIBITOR MIXTURE.
|
分辨率 1.85 Å
R-free 0.197
|
|
6HME
LOW-SALT STRUCTURE OF PROTEIN KINASE CK2 CATALYTIC SUBUNIT (ISOFORM CK2ALPHA; CSNK2A1 gene product) IN COMPLEX WITH THE INDENOINDOLE-TYPE INHIBITOR THN27
提交 2018-09-12
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–335(335 aa)
|
未记录
|
EDO 1,2-ETHANEDIOL × 3
SO4 SULFATE ION × 5
FXB 5-propan-2-yl-4-prop-2-enoxy-7,8-dihydro-6~{H}-indeno[1,2-b]indole-9,10-dione × 1
NA SODIUM ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293.15 K;180 MICROLITERS OF ENZYME SOLUTION (6 MG/ML CK2ALPHA, 0.025 M TRIS/HCL, PH 8.5, 0.5 M NACL) WERE MIXED WITH 20 MICROLITERS OF INHIBITOR STOCK SOLUTION (0.010 M INHIBITOR THN27 IN DMSO). THIS MIXTURE WAS INCUBATED FOR 30 MIN AT ROOM TEMPERATURE. THE RESERVOIR SOLUTION OF THE CRYSTALLIZATION EXPERIMENT WAS 0.2 M AMMONIUM SULFATE, 0.1 M SODIUM CACODYLATE TRIHYDRATE, PH 6.5, 30% (W/V) PEG 8,000. PRIOR TO EQUILIBRATION THE CRYSTALLIZATION DROP WAS COMPOSED OF 10 MICROLITERS RESERVOIR SOLUTION PLUS 20 MICROLITERS ENZYME/INHIBITOR MIXTURE.
|
分辨率 1.85 Å
R-free 0.197
|
|
6HNW
Human protein kinase CK2 alpha in complex with coumestrol
提交 2018-09-17
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–336(336 aa)
片段:kinase domain (residues 1-337)
|
未记录
|
CUE Coumestrol × 1
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;32% PEG4000, 0.2 M Lithium Sulfate
|
分辨率 2.00 Å
R-free 0.225
|
|
6HNY
Human protein kinase CK2 alpha in complex with boldine
提交 2018-09-17
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–336(336 aa)
片段:kinase domain (residues 1-337)
|
未记录
|
GHT Boldine × 1
SO4 SULFATE ION × 3
EDO 1,2-ETHANEDIOL × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;32% PEG4000, 0.2 M Lithium Sulfate
|
分辨率 1.65 Å
R-free 0.206
|
|
6HOP
Human protein kinase CK2 alpha in complex with curcumin degradation products
提交 2018-09-18
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–336(336 aa)
片段:kinase domain (residues 1-337)
|
未记录
|
SO4 SULFATE ION × 3
EDO 1,2-ETHANEDIOL × 1
FER 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID × 1
V55 4-hydroxy-3-methoxybenzaldehyde × 1
GJK (~{E})-4-(3-methoxy-4-oxidanyl-phenyl)but-3-en-2-one × 1
CIY (2E)-3-(4-hydroxy-3-methoxyphenyl)prop-2-enal × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;32% PEG4000, 0.2 M Lithium Sulfate
|
分辨率 1.55 Å
R-free 0.189
|
|
6HOQ
Human protein kinase CK2 alpha in complex with ferulic acid
提交 2018-09-18
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–336(336 aa)
片段:kinase domain (residues 1-337)
|
未记录
|
SO4 SULFATE ION × 3
FER 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID × 1
EDO 1,2-ETHANEDIOL × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;32% PEG4000, 0.2 M Lithium Sulfate
|
分辨率 1.55 Å
R-free 0.185
|
|
6HOR
Human protein kinase CK2 alpha in complex with feruloylmethane
提交 2018-09-18
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–336(336 aa)
片段:kinase domain (residues 1-337)
|
未记录
|
GJK (~{E})-4-(3-methoxy-4-oxidanyl-phenyl)but-3-en-2-one × 1
SO4 SULFATE ION × 3
EDO 1,2-ETHANEDIOL × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;32% PEG4000, 0.2 M Lithium Sulfate
|
分辨率 1.80 Å
R-free 0.199
|
|
6HOT
Human protein kinase CK2 alpha in complex with ferulic aldehyde
提交 2018-09-18
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–336(336 aa)
片段:kinase domain (residues 1-337)
|
未记录
|
SO4 SULFATE ION × 3
CIY (2E)-3-(4-hydroxy-3-methoxyphenyl)prop-2-enal × 1
EDO 1,2-ETHANEDIOL × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;32% PEG4000, 0.2 M Lithium Sulfate
|
分辨率 1.50 Å
R-free 0.196
|
|
6HOU
Human protein kinase CK2 alpha in complex with vanillin
提交 2018-09-18
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–336(336 aa)
片段:kinase domain (residues 1-337)
|
未记录
|
SO4 SULFATE ION × 2
V55 4-hydroxy-3-methoxybenzaldehyde × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;32% PEG4000, 0.2 M Lithium Sulfate
|
分辨率 1.80 Å
R-free 0.208
|
|
6JWA
Crystal structure of CK2a1 with 5-iodotubercidin
提交 2019-04-19
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
5ID (2R,3R,4S,5R)-2-(4-AMINO-5-IODO-7H-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-(HYDROXYMETHYL)TETRAHYDROFURAN-3,4-DIOL × 1
EDO 1,2-ETHANEDIOL × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;277 K;ethylene glycol
|
分辨率 1.78 Å
R-free 0.225
|
|
6L1Z
Crystal structure of CK2a1 with hematein
提交 2019-10-02
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
E3U (6aR)-3,4,6a,10-tetrakis(oxidanyl)-6,7-dihydroindeno[2,1-c]chromen-9-one × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;277 K;Ethylene Glycol
|
分辨率 1.91 Å
R-free 0.216
|
|
6L21
Crystal structure of CK2a1 H160A with hematein
提交 2019-10-02
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
突变:H160Y
|
E3U (6aR)-3,4,6a,10-tetrakis(oxidanyl)-6,7-dihydroindeno[2,1-c]chromen-9-one × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;277 K;Ethylene glycol
|
分辨率 2.05 Å
R-free 0.225
|
|
6L22
Crystal structure of CK2a1 H115Y with hematein
提交 2019-10-02
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
突变:H115Y
|
E3U (6aR)-3,4,6a,10-tetrakis(oxidanyl)-6,7-dihydroindeno[2,1-c]chromen-9-one × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;277 K;25% Ethylene Glycol
|
分辨率 2.12 Å
R-free 0.243
|
|
6L23
Crystal structure of CK2a1 V116I with hematein
提交 2019-10-02
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
突变:V116I
|
EDO 1,2-ETHANEDIOL × 9
E3U (6aR)-3,4,6a,10-tetrakis(oxidanyl)-6,7-dihydroindeno[2,1-c]chromen-9-one × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;277 K;Ethylene glycol
|
分辨率 1.97 Å
R-free 0.229
|
|
6L24
Crystal structure of CK2a1 H115Y/V116I with hematein
提交 2019-10-02
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
突变:H115Y, V116I
|
E3U (6aR)-3,4,6a,10-tetrakis(oxidanyl)-6,7-dihydroindeno[2,1-c]chromen-9-one × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;277 K;Ethylene glycol
|
分辨率 2.40 Å
R-free 0.263
|
|
6Q38
The Crystal structure of CK2a bound to P1-C4
提交 2018-12-03
|
构建体不同
突变/修饰不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 A
3–329(327 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
BEZ BENZOIC ACID × 1
A1H27 3,5-bis(1-methyl-1,2,3-triazol-4-yl)benzoic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;298 K;0.1 M HEPES 7.5 pH, 10 %w/v PEG 8K, 8 %v/v Ethelyene glycol
|
分辨率 1.74 Å
R-free 0.234
|
|
6Q4Q
The Crystal structure of CK2a bound to P2-C4
提交 2018-12-06
|
构建体不同
突变/修饰不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 A
3–329(327 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
GOL GLYCEROL × 1
BEZ BENZOIC ACID × 1
ACT ACETATE ION × 1
A1H27 3,5-bis(1-methyl-1,2,3-triazol-4-yl)benzoic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;298 K;0.16 M Calcium Acetate pH 6.5, 0.08 M Sodium Cacodylate, 14.4% PEG 8K, 20% Glycerol
|
分辨率 1.45 Å
R-free 0.215
|
|
6Q4Q
The Crystal structure of CK2a bound to P2-C4
提交 2018-12-06
|
构建体不同
突变/修饰不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 B
3–329(327 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
GOL GLYCEROL × 2
BEZ BENZOIC ACID × 1
ACT ACETATE ION × 1
A1H27 3,5-bis(1-methyl-1,2,3-triazol-4-yl)benzoic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;298 K;0.16 M Calcium Acetate pH 6.5, 0.08 M Sodium Cacodylate, 14.4% PEG 8K, 20% Glycerol
|
分辨率 1.45 Å
R-free 0.215
|
|
6QY7
Human CSNK2A1 bound to ERB-041
提交 2019-03-08
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
041 2-(3-FLUORO-4-HYDROXYPHENYL)-7-VINYL-1,3-BENZOXAZOL-5-OL × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;277 K;10% PEG6000, 2M sodium chloride
|
分辨率 2.10 Å
R-free 0.235
|
|
6QY7
Human CSNK2A1 bound to ERB-041
提交 2019-03-08
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
041 2-(3-FLUORO-4-HYDROXYPHENYL)-7-VINYL-1,3-BENZOXAZOL-5-OL × 1
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;277 K;10% PEG6000, 2M sodium chloride
|
分辨率 2.10 Å
R-free 0.235
|
|
6RB1
Human protein kinase CK2 alpha in complex with 2-cyano-2-propenamide compound 1
提交 2019-04-08
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–336(336 aa)
片段:kinase domain (residues 1-337)
|
未记录
|
SO4 SULFATE ION × 3
EDO 1,2-ETHANEDIOL × 2
JWQ (~{E})-2-cyano-3-(3-methoxy-4-oxidanyl-phenyl)-~{N}-[5-(trifluoromethyl)-1,3,4-thiadiazol-2-yl]prop-2-enamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;32% PEG4000, 0.2 M Lithium Sulfate
|
分辨率 1.50 Å
R-free 0.190
|
|
6RCB
Human protein kinase CK2 alpha in complex with 2-cyano-2-propenamide compound 14
提交 2019-04-11
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–336(336 aa)
片段:kinase domain (residues 1-337)
|
未记录
|
JYZ (~{E})-2-cyano-~{N}-(2-hydroxyphenyl)-3-(3-methoxy-4-oxidanyl-phenyl)prop-2-enamide × 1
SO4 SULFATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;32% PEG4000, 0.2 M Lithium Sulfate
|
分辨率 2.05 Å
R-free 0.226
|
|
6RCM
Human protein kinase CK2 alpha in complex with 2-cyano-2-propenamide compound 3
提交 2019-04-11
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–336(336 aa)
片段:kinase domain (residues 1-337)
|
未记录
|
EDO 1,2-ETHANEDIOL × 1
K0N (~{E})-~{N}-(5-~{tert}-butyl-1,3,4-thiadiazol-2-yl)-2-cyano-3-(3-methoxy-4-oxidanyl-phenyl)prop-2-enamide × 1
SO4 SULFATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;32% PEG4000, 0.2 M Lithium Sulfate
|
分辨率 1.70 Å
R-free 0.201
|
|
6RFE
Human protein kinase CK2 alpha in complex with 2-cyano-2-propenamide compound 4
提交 2019-04-13
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–336(336 aa)
片段:kinase domain (residues 1-337)
|
未记录
|
EDO 1,2-ETHANEDIOL × 2
K0Z (~{E})-~{N}-(5-bromanyl-1,3,4-thiadiazol-2-yl)-2-cyano-3-(3-methoxy-4-oxidanyl-phenyl)prop-2-enamide × 1
SO4 SULFATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;32% PEG4000, 0.2 M Lithium Sulfate
|
分辨率 1.54 Å
R-free 0.198
|
|
6RFF
Human protein kinase CK2 alpha in complex with 2-cyano-2-propenamide compound 7
提交 2019-04-14
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–336(336 aa)
片段:kinase domain (residues 1-337)
|
未记录
|
K1B (~{E})-~{N}-(5-bromanyl-1,3,4-thiadiazol-2-yl)-2-cyano-3-(3-nitro-4-oxidanyl-phenyl)prop-2-enamide × 1
EDO 1,2-ETHANEDIOL × 1
SO4 SULFATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;32% PEG4000, 0.2 M Lithium Sulfate
|
分辨率 1.80 Å
R-free 0.199
|
|
6SPW
Structure of protein kinase CK2 catalytic subunit with the CK2beta-competitive bisubstrate inhibitor ARC3140
提交 2019-09-03
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 4
PDB 声明:tetrameric
|
链 A
1–391(391 aa)
|
未记录
|
NA SODIUM ION × 1
A0Z 8-[4,5,6,7-tetrakis(iodanyl)benzimidazol-1-yl]octanoic acid × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293.15 K;1 MIKROLITER OF THE CK2ALPHA/ARC3140
MIXTURE (COMPOSITION: 7 MG/ML CK2ALPHA ENZYME, 1 MILLIMOLAR ARC3140, 10 % DIMETHYL SULFOXIDE, 450 MM NACL, 22.5 MM TRIS/HCL, PH 8.5) WAS MIXED WITH 2.5 MIKROLITER RESERVOIR SOLUTION (COMPOSITION: 30 % PEG4000, 0.2 M AMMONIUM ACETATE, 0.1 M SODIUM CITRATE, PH 5.6) FOLLOWED BY VAPOUR DIFFUSION EQUILIBRATION AGAINST MICROLITER OF THE RESERVOIR SOLUTION.
|
分辨率 1.60 Å
R-free 0.196
|
|
6SPX
Structure of protein kinase CK2 catalytic subunit in complex with the CK2beta-competitive bisubstrate inhibitor ARC1502
提交 2019-09-03
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 A
1–335(335 aa)
|
未记录
|
9AB 8-[4,5,6,7-tetrakis(bromanyl)benzimidazol-1-yl]octanoic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;1 microliter of the CK2alpha/ARC1502 mixture (composition: 7 mg/ml CK2alpha enzyme, 1 mM ARC1502, 10 % dimethyl sulfoxide, 450 mM NaCl, 25 mM Tris/HCl, pH 8.5) was mixed with 2.5 mikroliter reservoir solution (composition: 30 % PEG4000, 0.2 M ammonium acetate, 0.1 M sodium citrate, pH 5.6) followed by vapour diffusion equilibration against 100 microliter of the reservoir solution.
|
分辨率 1.99 Å
R-free 0.223
|
|
6TEI
Crystal structure of human protein kinase CK2alpha (CSNK2A1 gene product) in complex with the 2-aminothiazole-type inhibitor 17
提交 2019-11-12
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
N4N 3-[(4-pyridin-2-yl-1,3-thiazol-2-yl)amino]benzoic acid × 1
SO4 SULFATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;reservoir composition: 30 % (w/v) PEG8000, 0.2 M ammonium sulfate, 0.1 M sodium cacodylate, pH 6.5;
crystallization drop composition before equilibration: 0.01 ml reservoir solution plus 0.02 ml enzyme stock solution (6 mg/ml enzyme, 0.5 M NaCl, 25 mM Tris/HCl, pH 8.5); the 2-aminothiazole-type inhibitor 17 was introduced by extensive soaking
|
分辨率 1.76 Å
R-free 0.204
|
|
6TEI
Crystal structure of human protein kinase CK2alpha (CSNK2A1 gene product) in complex with the 2-aminothiazole-type inhibitor 17
提交 2019-11-12
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–335(335 aa)
|
未记录
|
N4N 3-[(4-pyridin-2-yl-1,3-thiazol-2-yl)amino]benzoic acid × 1
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;reservoir composition: 30 % (w/v) PEG8000, 0.2 M ammonium sulfate, 0.1 M sodium cacodylate, pH 6.5;
crystallization drop composition before equilibration: 0.01 ml reservoir solution plus 0.02 ml enzyme stock solution (6 mg/ml enzyme, 0.5 M NaCl, 25 mM Tris/HCl, pH 8.5); the 2-aminothiazole-type inhibitor 17 was introduced by extensive soaking
|
分辨率 1.76 Å
R-free 0.204
|
|
6TLL
HUMAN CK2 KINASE ALPHA SUBUNIT IN COMPLEX WITH THE ATP-COMPETITIVE INHIBITOR 4,5,6,7-TETRABROMOBENZOTRIAZOLE (tBBT)
提交 2019-12-03
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–391(391 aa)
|
未记录
|
TBS 4,5,6,7-TETRABROMOBENZOTRIAZOLE × 2
PEG DI(HYDROXYETHYL)ETHER × 2
NA SODIUM ION × 1
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;290 K;0.1 M sodium HEPES/MOPS buffer pH 7.5, 20 mM sodium formate, 20 mM ammonium acetate, 20 mM sodium citrate tribasic dihydrate, 20 mM sodium potassium tartrate tetrahydrate, 20 mM sodium oxamate, 20% polyethylene glycol 550 monomethyl ester, 10% polyethylene glycol 20000
|
分辨率 1.88 Å
R-free 0.187
|
|
6TLO
HUMAN CK2 KINASE ALPHA SUBUNIT IN COMPLEX WITH THE ATP-COMPETITIVE INHIBITOR 4,5,6-TRIBROMOBENZOTRIAZOLE
提交 2019-12-03
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–391(391 aa)
|
未记录
|
NKB 5,6,7-tris(bromanyl)-1~{H}-benzotriazole × 2
NA SODIUM ION × 1
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;290 K;0.1 M sodium HEPES/MOPS buffer pH 7.5, 20 mM sodium formate, 20 mM ammonium acetate, 20 mM sodium citrate tribasic dihydrate, 20 mM sodium potassium tartrate tetrahydrate, 20 mM sodium oxamate, 20% polyethylene glycol 550 monomethyl ester, 10% polyethylene glycol 20000
|
分辨率 1.69 Å
R-free 0.171
|
|
6TLP
HUMAN CK2 KINASE ALPHA SUBUNIT IN COMPLEX WITH THE ATP-COMPETITIVE INHIBITOR 5,6-DIBROMOBENZOTRIAZOLE
提交 2019-12-03
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–391(391 aa)
|
未记录
|
7M0 5,6-DIBROMOBENZOTRIAZOLE × 1
FLC CITRATE ANION × 1
FMT FORMIC ACID × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;290 K;0.1 M sodium HEPES/MOPS buffer pH 7.5, 20 mM sodium formate, 20 mM ammonium acetate, 20 mM sodium citrate tribasic dihydrate, 20 mM sodium potassium tartrate tetrahydrate, 20 mM sodium oxamate, 20% polyethylene glycol 550 monomethyl ester, 10% polyethylene glycol 20000
|
分辨率 1.93 Å
R-free 0.189
|
|
6TLR
HUMAN CK2 KINASE ALPHA SUBUNIT IN COMPLEX WITH THE ATP-COMPETITIVE INHIBITOR 4,7-DIBROMOBENZOTRIAZOLE
提交 2019-12-03
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–391(391 aa)
|
未记录
|
NKE 4,7-bis(bromanyl)-1~{H}-benzotriazole × 2
NA SODIUM ION × 1
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;290 K;0.1 M sodium HEPES/MOPS buffer pH 7.5, 20 mM sodium formate, 20 mM ammonium acetate, 20 mM sodium citrate tribasic dihydrate, 20 mM sodium potassium tartrate tetrahydrate, 20 mM sodium oxamate, 20% polyethylene glycol 550 monomethyl ester, 10% polyethylene glycol 20000
|
分辨率 1.64 Å
R-free 0.178
|
|
6TLS
HUMAN CK2 KINASE ALPHA SUBUNIT IN COMPLEX WITH THE ATP-COMPETITIVE INHIBITOR 4,6-DIBROMOBENZOTRIAZOLE
提交 2019-12-03
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–391(391 aa)
|
未记录
|
NL2 5,7-bis(bromanyl)-1~{H}-benzotriazole × 2
CL CHLORIDE ION × 5
NA SODIUM ION × 1
PEG DI(HYDROXYETHYL)ETHER × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;290 K;0.1 M sodium HEPES/MOPS buffer pH 7.5, 20 mM sodium formate, 20 mM ammonium acetate, 20 mM sodium citrate tribasic dihydrate, 20 mM sodium potassium tartrate tetrahydrate, 20 mM sodium oxamate, 20% polyethylene glycol 550 monomethyl ester, 10% polyethylene glycol 20000
|
分辨率 1.46 Å
R-free 0.173
|
|
6TLU
HUMAN CK2 KINASE ALPHA SUBUNIT IN COMPLEX WITH THE ATP-COMPETITIVE INHIBITOR 4,5-DIBROMOBENZOTRIAZOLE
提交 2019-12-03
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 AAA
1–391(391 aa)
|
未记录
|
NKT 6,7-bis(bromanyl)-1~{H}-benzotriazole × 2
NA SODIUM ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;290 K;0.1 M sodium HEPES/MOPS buffer pH 7.5, 20 mM sodium formate, 20 mM ammonium acetate, 20 mM sodium citrate tribasic dihydrate, 20 mM sodium potassium tartrate tetrahydrate, 20 mM sodium oxamate, 20% polyethylene glycol 550 monomethyl ester, 10% polyethylene glycol 20000
|
分辨率 1.81 Å
R-free 0.184
|
|
6TLV
HUMAN CK2 KINASE ALPHA SUBUNIT IN COMPLEX WITH THE ATP-COMPETITIVE INHIBITOR 5-BROMOBENZOTRIAZOLE
提交 2019-12-03
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–391(391 aa)
|
未记录
|
NKW 6-bromanyl-1~{H}-benzotriazole × 2
CL CHLORIDE ION × 3
NA SODIUM ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;290 K;0.1 M sodium HEPES/MOPS buffer pH 7.5, 20 mM sodium formate, 20 mM ammonium acetate, 20 mM sodium citrate tribasic dihydrate, 20 mM sodium potassium tartrate tetrahydrate, 20 mM sodium oxamate, 20% polyethylene glycol 550 monomethyl ester, 10% polyethylene glycol 20000
|
分辨率 1.67 Å
R-free 0.173
|
|
6TLW
HUMAN CK2 KINASE ALPHA SUBUNIT IN COMPLEX WITH THE ATP-COMPETITIVE INHIBITOR 4-BROMOBENZOTRIAZOLE
提交 2019-12-03
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–391(391 aa)
|
未记录
|
NKZ 7-bromanyl-1~{H}-benzotriazole × 1
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;290 K;0.1 M sodium HEPES/MOPS buffer pH 7.5, 20 mM sodium formate, 20 mM ammonium acetate, 20 mM sodium citrate tribasic dihydrate, 20 mM sodium potassium tartrate tetrahydrate, 20 mM sodium oxamate, 20% polyethylene glycol 550 monomethyl ester, 10% polyethylene glycol 20000
|
分辨率 1.73 Å
R-free 0.187
|
|
6YPG
Crystal Structure of CK2alpha with Compound 2 bound to second crystal form
提交 2020-04-16
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:R21S, K74A, K75A, K76A
|
N5Q 4-[(4-naphthalen-2-yl-1,3-thiazol-2-yl)amino]-2-oxidanyl-benzoic acid × 1
ACT ACETATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;298 K;112.5mM Mes, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.51 Å
R-free 0.243
|
|
6YPH
Crystal Structure of CK2alpha with Compound 2 bound
提交 2020-04-16
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:R21S
|
N5Q 4-[(4-naphthalen-2-yl-1,3-thiazol-2-yl)amino]-2-oxidanyl-benzoic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;298 K;0.1 M HEPES 7.5 pH, 10 %w/v PEG 8K, 8 %v/v Ethelyene glycol
|
分辨率 1.67 Å
R-free 0.275
|
|
6YPH
Crystal Structure of CK2alpha with Compound 2 bound
提交 2020-04-16
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
|
突变:R21S
|
N5Q 4-[(4-naphthalen-2-yl-1,3-thiazol-2-yl)amino]-2-oxidanyl-benzoic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;298 K;0.1 M HEPES 7.5 pH, 10 %w/v PEG 8K, 8 %v/v Ethelyene glycol
|
分辨率 1.67 Å
R-free 0.275
|
|
6YPJ
Crystal Structure of CK2alpha with Compound 1 bound
提交 2020-04-16
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K75A
|
ACT ACETATE ION × 1
P5W 4-[(4-phenyl-1,3-thiazol-2-yl)amino]benzoic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;298 K;112.5mM Mes, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.64 Å
R-free 0.232
|
|
6YPK
Crystal Structure of CK2alpha with GTP bound
提交 2020-04-16
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K75A
|
GDP GUANOSINE-5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;298 K;112.5mM Mes, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.79 Å
R-free 0.210
|
|
6YPN
Crystal Structure of CK2alpha with 2 molecules of ADP bound
提交 2020-04-16
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–329(329 aa)
|
未记录
|
ADP ADENOSINE-5'-DIPHOSPHATE × 2
ACT ACETATE ION × 1
MG MAGNESIUM ION × 2
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.2;298 K;20 %v/v PEGSM, 10 %v/v Glycerol, 0.2 M Na Form, 0.1 M Na-Phosphate
|
分辨率 1.58 Å
R-free 0.247
|
|
6YUL
CK2 alpha bound to Macrocycle
提交 2020-04-27
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 AAA
1–391(391 aa)
|
未记录
|
SO4 SULFATE ION × 5
PQ5 7,10-Dioxa-13,17,18,21-tetrazatetracyclo[12.5.2.12,6.017,20]docosa-1(20),2(22),3,5,14(21),15,18-heptaene-5-carboxylic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;0.2 M ammonia sulphate, 0.1 MES pH 6.5, 31-35% (v/v) polyethylene glycol PEG 5000 MME
10 mg / mL protein
|
分辨率 2.40 Å
R-free 0.232
|
|
6YUL
CK2 alpha bound to Macrocycle
提交 2020-04-27
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 GGG
1–391(391 aa)
|
未记录
|
SO4 SULFATE ION × 5
PQ5 7,10-Dioxa-13,17,18,21-tetrazatetracyclo[12.5.2.12,6.017,20]docosa-1(20),2(22),3,5,14(21),15,18-heptaene-5-carboxylic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;0.2 M ammonia sulphate, 0.1 MES pH 6.5, 31-35% (v/v) polyethylene glycol PEG 5000 MME
10 mg / mL protein
|
分辨率 2.40 Å
R-free 0.232
|
|
6YUM
CK2 alpha bound to unclosed Macrocycle
提交 2020-04-27
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 AAA
1–391(391 aa)
|
未记录
|
SO4 SULFATE ION × 3
PQ8 4-[5-[2-(2-hydroxyethyloxy)ethyl-[(2-methylpropan-2-yl)oxycarbonyl]amino]pyrazolo[1,5-a]pyrimidin-3-yl]-2-oxidanyl-benzoic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;0.1 M MES pH 6.5
0.2 ammonia sulphate
30% PEG 5000 MME
10 mg/mL protein
|
分辨率 2.75 Å
R-free 0.284
|
|
6YUM
CK2 alpha bound to unclosed Macrocycle
提交 2020-04-27
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 GGG
1–391(391 aa)
|
未记录
|
SO4 SULFATE ION × 3
PQ8 4-[5-[2-(2-hydroxyethyloxy)ethyl-[(2-methylpropan-2-yl)oxycarbonyl]amino]pyrazolo[1,5-a]pyrimidin-3-yl]-2-oxidanyl-benzoic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;0.1 M MES pH 6.5
0.2 ammonia sulphate
30% PEG 5000 MME
10 mg/mL protein
|
分辨率 2.75 Å
R-free 0.284
|
|
6YZH
Crystal structure of P8C9 bound to CK2alpha
提交 2020-05-07
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 A
3–329(327 aa)
|
未记录
|
MG MAGNESIUM ION × 2
ADP ADENOSINE-5'-DIPHOSPHATE × 1
GOL GLYCEROL × 1
NA SODIUM ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.2;298 K;12 %v/v PEGSH, 0.1 M Mg Acet,
0.1 M KCl,0.1 M MES
|
分辨率 1.19 Å
R-free 0.190
|
|
6Z19
Crystal structure of P8C9 bound to CK2alpha
提交 2020-05-13
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 B
2–329(328 aa)
|
未记录
|
ADP ADENOSINE-5'-DIPHOSPHATE × 1
ACT ACETATE ION × 2
GOL GLYCEROL × 3
MG MAGNESIUM ION × 2
PEG DI(HYDROXYETHYL)ETHER × 1
SO4 SULFATE ION × 4
NA SODIUM ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;298 K;25 %v/v PEGSM, 0.2 M (NH4)2SO4, 0.1 M Na Cacod
|
分辨率 1.47 Å
R-free 0.221
|
|
6Z83
CK2 alpha bound to chemical probe SGC-CK2-1
提交 2020-06-02
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 AAA
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 5
QBE ~{N}-[5-[[3-cyano-7-(cyclopropylamino)-3~{H}-pyrazolo[1,5-a]pyrimidin-5-yl]amino]-2-methyl-phenyl]propanamide × 1
PEG DI(HYDROXYETHYL)ETHER × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;0.2 M ammonia sulphate
0.1 M bis-tris pH 5.5
23-26% PEG 3350
|
分辨率 2.17 Å
R-free 0.245
|
|
6Z83
CK2 alpha bound to chemical probe SGC-CK2-1
提交 2020-06-02
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 BBB
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 7
QBE ~{N}-[5-[[3-cyano-7-(cyclopropylamino)-3~{H}-pyrazolo[1,5-a]pyrimidin-5-yl]amino]-2-methyl-phenyl]propanamide × 1
PEG DI(HYDROXYETHYL)ETHER × 5
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;0.2 M ammonia sulphate
0.1 M bis-tris pH 5.5
23-26% PEG 3350
|
分辨率 2.17 Å
R-free 0.245
|
|
6Z84
CK2 alpha bound to chemical probe SGC-CK2-1 derivative
提交 2020-06-02
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 AAA
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 8
QB8 ~{N}-[1-[3-cyano-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidin-5-yl]indol-6-yl]ethanamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;0.1 M bis-tris pH 5.5
23-26% (v/v) PEG 3350
0.2 M ammonia sulphate
|
分辨率 2.50 Å
R-free 0.250
|
|
6Z84
CK2 alpha bound to chemical probe SGC-CK2-1 derivative
提交 2020-06-02
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 BBB
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 4
QB8 ~{N}-[1-[3-cyano-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidin-5-yl]indol-6-yl]ethanamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;0.1 M bis-tris pH 5.5
23-26% (v/v) PEG 3350
0.2 M ammonia sulphate
|
分辨率 2.50 Å
R-free 0.250
|
|
7A49
Crystal structure of human protein kinase CK2alpha (CSNK2A1 gene product) in complex with the ATP-competitive inhibitor 6-bromo-5-chloro-1H-triazolo[4,5-b]pyridine
提交 2020-08-19
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
QWN 6-bromanyl-5-chloranyl-1~{H}-[1,2,3]triazolo[4,5-b]pyridine × 1
SO4 SULFATE ION × 5
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293.15 K;1 MIKROLITER OF THE CK2ALPHA/INHIBITOR MIXTURE (COMPOSITION: 7 MG/ML CK2ALPHA ENZYME, 1 MILLIMOLAR INHIBITOR, 10 % DIMETHYL SULFOXIDE, 450 MM NACL, 22.5 MM TRIS/HCL, PH 8.5) WAS MIXED WITH 1 MIKROLITER RESERVOIR SOLUTION (COMPOSITION: 25 % PEG3350, 0.2 M AMMONIUM SULPHATE, 0.1 M BIS-TRIS BUFFER, PH 5.5) FOLLOWED BY VAPOUR DIFFUSION EQUILIBRATION AGAINST THE RESERVOIR SOLUTION.
|
分辨率 2.03 Å
R-free 0.216
|
|
7A49
Crystal structure of human protein kinase CK2alpha (CSNK2A1 gene product) in complex with the ATP-competitive inhibitor 6-bromo-5-chloro-1H-triazolo[4,5-b]pyridine
提交 2020-08-19
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–335(335 aa)
|
未记录
|
QWN 6-bromanyl-5-chloranyl-1~{H}-[1,2,3]triazolo[4,5-b]pyridine × 1
SO4 SULFATE ION × 5
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293.15 K;1 MIKROLITER OF THE CK2ALPHA/INHIBITOR MIXTURE (COMPOSITION: 7 MG/ML CK2ALPHA ENZYME, 1 MILLIMOLAR INHIBITOR, 10 % DIMETHYL SULFOXIDE, 450 MM NACL, 22.5 MM TRIS/HCL, PH 8.5) WAS MIXED WITH 1 MIKROLITER RESERVOIR SOLUTION (COMPOSITION: 25 % PEG3350, 0.2 M AMMONIUM SULPHATE, 0.1 M BIS-TRIS BUFFER, PH 5.5) FOLLOWED BY VAPOUR DIFFUSION EQUILIBRATION AGAINST THE RESERVOIR SOLUTION.
|
分辨率 2.03 Å
R-free 0.216
|
|
7A4B
Crystal structure of human protein kinase CK2alpha (CSNK2A1 gene product) in complex with the ATP-competitive inhibitor 5,6-dibromo-1H-triazolo[4,5-b]pyridine
提交 2020-08-19
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
GOL GLYCEROL × 1
QXW 5,6-dibromo-1H-triazolo[4,5-b]pyridine × 1
SO4 SULFATE ION × 5
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293.15 K;1 MIKROLITER OF THE CK2ALPHA/INHIBITOR MIXTURE (COMPOSITION: 7 MG/ML CK2ALPHA ENZYME, 1 MILLIMOLAR INHIBITOR, 10 % DIMETHYL SULFOXIDE, 450 MM NACL, 22.5 MM TRIS/HCL, PH 8.5) WAS MIXED WITH 1 MIKROLITER RESERVOIR SOLUTION (COMPOSITION: 25 % PEG3350, 0.2 M AMMONIUM SULPHATE, 0.1 M BIS-TRIS BUFFER, PH 5.5) FOLLOWED BY VAPOUR DIFFUSION EQUILIBRATION AGAINST THE RESERVOIR SOLUTION.
|
分辨率 2.06 Å
R-free 0.223
|
|
7A4B
Crystal structure of human protein kinase CK2alpha (CSNK2A1 gene product) in complex with the ATP-competitive inhibitor 5,6-dibromo-1H-triazolo[4,5-b]pyridine
提交 2020-08-19
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–335(335 aa)
|
未记录
|
GOL GLYCEROL × 1
QXW 5,6-dibromo-1H-triazolo[4,5-b]pyridine × 1
SO4 SULFATE ION × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293.15 K;1 MIKROLITER OF THE CK2ALPHA/INHIBITOR MIXTURE (COMPOSITION: 7 MG/ML CK2ALPHA ENZYME, 1 MILLIMOLAR INHIBITOR, 10 % DIMETHYL SULFOXIDE, 450 MM NACL, 22.5 MM TRIS/HCL, PH 8.5) WAS MIXED WITH 1 MIKROLITER RESERVOIR SOLUTION (COMPOSITION: 25 % PEG3350, 0.2 M AMMONIUM SULPHATE, 0.1 M BIS-TRIS BUFFER, PH 5.5) FOLLOWED BY VAPOUR DIFFUSION EQUILIBRATION AGAINST THE RESERVOIR SOLUTION.
|
分辨率 2.06 Å
R-free 0.223
|
|
7A4C
Crystal structure of human protein kinase CK2alpha (CSNK2A1 gene product) in complex with the ATP-competitive inhibitor 5,6,7-tribromo-1H-triazolo[4,5-b]pyridine
提交 2020-08-19
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
QWW 5,6,7-tris(bromanyl)-1~{H}-[1,2,3]triazolo[4,5-b]pyridine × 1
GOL GLYCEROL × 2
SO4 SULFATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293.15 K;1 MIKROLITER OF THE CK2ALPHA/INHIBITOR MIXTURE (COMPOSITION: 7 MG/ML CK2ALPHA ENZYME, 1 MILLIMOLAR INHIBITOR, 10 % DIMETHYL SULFOXIDE, 450 MM NACL, 22.5 MM TRIS/HCL, PH 8.5) WAS MIXED WITH 1 MIKROLITER RESERVOIR SOLUTION (COMPOSITION: 25 % PEG3350, 0.2 M AMMONIUM SULPHATE, 0.1 M BIS-TRIS BUFFER, PH 5.5) FOLLOWED BY VAPOUR DIFFUSION EQUILIBRATION AGAINST THE RESERVOIR SOLUTION.
|
分辨率 2.50 Å
R-free 0.232
|
|
7A4C
Crystal structure of human protein kinase CK2alpha (CSNK2A1 gene product) in complex with the ATP-competitive inhibitor 5,6,7-tribromo-1H-triazolo[4,5-b]pyridine
提交 2020-08-19
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–335(335 aa)
|
未记录
|
QWW 5,6,7-tris(bromanyl)-1~{H}-[1,2,3]triazolo[4,5-b]pyridine × 1
GOL GLYCEROL × 1
SO4 SULFATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293.15 K;1 MIKROLITER OF THE CK2ALPHA/INHIBITOR MIXTURE (COMPOSITION: 7 MG/ML CK2ALPHA ENZYME, 1 MILLIMOLAR INHIBITOR, 10 % DIMETHYL SULFOXIDE, 450 MM NACL, 22.5 MM TRIS/HCL, PH 8.5) WAS MIXED WITH 1 MIKROLITER RESERVOIR SOLUTION (COMPOSITION: 25 % PEG3350, 0.2 M AMMONIUM SULPHATE, 0.1 M BIS-TRIS BUFFER, PH 5.5) FOLLOWED BY VAPOUR DIFFUSION EQUILIBRATION AGAINST THE RESERVOIR SOLUTION.
|
分辨率 2.50 Å
R-free 0.232
|
|
7A4Q
The Crystal structure of RO4613269 bound to CK2alpha
提交 2020-08-20
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
3–329(327 aa)
|
突变:K74A, K75A, K76A, R21S
|
QY2 2-methoxyimino-5-(quinolin-6-ylmethyl)-1,3-thiazol-4-one × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.42 Å
R-free 0.220
|
|
7AT5
Structure of protein kinase ck2 catalytic subunit (csnk2a1 gene product) in complex with the bivalent inhibitor KN2
提交 2020-10-29
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
SO4 SULFATE ION × 2
RXE ~{N}'-[2-(3,4-dichlorophenyl)ethyl]-~{N}-[4-[4,5,6,7-tetrakis(bromanyl)benzimidazol-1-yl]butyl]butanediamide × 1
42J 2-(3,4-dichlorophenyl)ethanamine × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;reservoir composition: 30 % (w/v) PEG8000, 0.2 M ammonium sulfate, 0.1 M sodium cacodylate, pH 6.5; crystallization drop composition before equilibration: 0.01 ml reservoir solution plus 0.02 ml enzyme stock solution (6 mg/ml enzyme, 0.5 M NaCl, 25 mM Tris/HCl, pH 8.5); the bivalent inhibitor KN2 was introduced by extensive soaking
|
分辨率 1.77 Å
R-free 0.195
|
|
7AT5
Structure of protein kinase ck2 catalytic subunit (csnk2a1 gene product) in complex with the bivalent inhibitor KN2
提交 2020-10-29
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–335(335 aa)
|
未记录
|
SO4 SULFATE ION × 2
RXE ~{N}'-[2-(3,4-dichlorophenyl)ethyl]-~{N}-[4-[4,5,6,7-tetrakis(bromanyl)benzimidazol-1-yl]butyl]butanediamide × 1
42J 2-(3,4-dichlorophenyl)ethanamine × 1
EDO 1,2-ETHANEDIOL × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;reservoir composition: 30 % (w/v) PEG8000, 0.2 M ammonium sulfate, 0.1 M sodium cacodylate, pH 6.5; crystallization drop composition before equilibration: 0.01 ml reservoir solution plus 0.02 ml enzyme stock solution (6 mg/ml enzyme, 0.5 M NaCl, 25 mM Tris/HCl, pH 8.5); the bivalent inhibitor KN2 was introduced by extensive soaking
|
分辨率 1.77 Å
R-free 0.195
|
|
7AY9
Crystal structure of CK2 bound by compound 7
提交 2020-11-11
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomer
|
链 A
1–336(336 aa)
|
未记录
|
SO4 SULFATE ION × 6
S92 7-(cyclopropylamino)-5-(5-(6-oxo-1,6-dihydropyridin-3-yl)-1-(2-(piperidin-1-yl)ethyl)-1H-1,2,3-triazol-4-yl)pyrazolo[1,5-a]pyrimidine-3-carbonitrile × 1
EDO 1,2-ETHANEDIOL × 11
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;293 K;22-26% PEG 6000 ( w/v ), 0.2 M ammonium sulfate and 0.1 M MES (pH 6.5).
|
分辨率 2.25 Å
R-free 0.207
|
|
7AY9
Crystal structure of CK2 bound by compound 7
提交 2020-11-11
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomer
|
链 B
1–336(336 aa)
|
未记录
|
SO4 SULFATE ION × 5
S92 7-(cyclopropylamino)-5-(5-(6-oxo-1,6-dihydropyridin-3-yl)-1-(2-(piperidin-1-yl)ethyl)-1H-1,2,3-triazol-4-yl)pyrazolo[1,5-a]pyrimidine-3-carbonitrile × 1
EDO 1,2-ETHANEDIOL × 13
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;293 K;22-26% PEG 6000 ( w/v ), 0.2 M ammonium sulfate and 0.1 M MES (pH 6.5).
|
分辨率 2.25 Å
R-free 0.207
|
|
7AY9
Crystal structure of CK2 bound by compound 7
提交 2020-11-11
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 3
蛋白同源多聚体
同源多聚体;蛋白 × 2
PDB 声明:dimer
|
链 A
1–336(336 aa)
链 B
1–336(336 aa)
|
未记录
|
SO4 SULFATE ION × 11
S92 7-(cyclopropylamino)-5-(5-(6-oxo-1,6-dihydropyridin-3-yl)-1-(2-(piperidin-1-yl)ethyl)-1H-1,2,3-triazol-4-yl)pyrazolo[1,5-a]pyrimidine-3-carbonitrile × 2
EDO 1,2-ETHANEDIOL × 24
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;293 K;22-26% PEG 6000 ( w/v ), 0.2 M ammonium sulfate and 0.1 M MES (pH 6.5).
|
分辨率 2.25 Å
R-free 0.207
|
|
7AYA
Crystal structure of CK2 bound by compound 9
提交 2020-11-11
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–336(336 aa)
|
未记录
|
SO4 SULFATE ION × 6
EDO 1,2-ETHANEDIOL × 12
S8W ~{N}-[2-[(1~{R},2~{R})-2-(aminomethyl)cyclopropyl]-5-[[3-cyano-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidin-5-yl]amino]phenyl]ethanamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;293 K;22-26% PEG 6000 ( w/v ), 0.2 M ammonium sulfate and 0.1 M MES (pH 6.5).
|
分辨率 2.45 Å
R-free 0.229
|
|
7AYA
Crystal structure of CK2 bound by compound 9
提交 2020-11-11
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–336(336 aa)
|
未记录
|
SO4 SULFATE ION × 4
EDO 1,2-ETHANEDIOL × 14
S8W ~{N}-[2-[(1~{R},2~{R})-2-(aminomethyl)cyclopropyl]-5-[[3-cyano-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidin-5-yl]amino]phenyl]ethanamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;293 K;22-26% PEG 6000 ( w/v ), 0.2 M ammonium sulfate and 0.1 M MES (pH 6.5).
|
分辨率 2.45 Å
R-free 0.229
|
|
7B8H
Monoclinic structure of human protein kinase CK2 catalytic subunit in complex with a heparin oligo saccharide
提交 2020-12-12
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
其他组合
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
GOL GLYCEROL × 1
NIO NICOTINIC ACID × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293.15 K;1 microliter protein stock solution (8 mg/ml CK2alpha, 2 mM Heparin dodecasaccharide, 285.7 mM NaCl, 15 mM Tris, pH 8.5) was mixed with 2.5 microliter reservoir solution (32 %(w/v) PEG4000, 0.2 M malonate, 0.1 M Tris, pH 7.5). The resulting drop was equilibrated against 800 microliter reservoir solution. After equilibration the crystallization process was initialized by addition of 150 nanoliter micro seeding suspension. CK2alpha/heparin crystals grown in this way were prepared for cryo diffractometry by soaking them into a cryo solution consisting of 32 % (w/v) PEG4000, 0.2 M NaCl, 0.5 mM Heparin dodecasaccharide.
|
分辨率 1.34 Å
R-free 0.164
|
|
7B8I
Tetragonal structure of human protein kinase CK2 catalytic subunit in complex with a heparin oligo saccharide
提交 2020-12-12
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
其他组合
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
GOL GLYCEROL × 1
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293.15 K;Prior to crystallization, the enzyme was incubated with heparin decasaccharide; the composition of this preincubation solution was 5 mg/ml CK2alpha1-335, 1.4 mM Heparin decasaccharide, 340 mM NaCl, 25 mM Tris/HCl, pH 8.5. 4 microliter of this enzyme/heparin mixture was mixed with 1 microliter reservoir solution. The composition of the reservoir solution was 32 % (w/v) PEG4000, 0.2 M Lithium sulfate, 0.1 M Tris/HCl, pH 7.5. As a preparation of X-ray diffraction data collection, the crystals were transferred to a cryo solution composed of 32 % (w/v) PEG4000, 10 % (v/v) glycerol, 0.2 M lithium sulfate, 0.5 mM Heparin decasaccharide, 0.1 M Tris/HCl, pH 7.5.
|
分辨率 2.55 Å
R-free 0.240
|
|
7B8I
Tetragonal structure of human protein kinase CK2 catalytic subunit in complex with a heparin oligo saccharide
提交 2020-12-12
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–335(335 aa)
|
未记录
|
SO4 SULFATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293.15 K;Prior to crystallization, the enzyme was incubated with heparin decasaccharide; the composition of this preincubation solution was 5 mg/ml CK2alpha1-335, 1.4 mM Heparin decasaccharide, 340 mM NaCl, 25 mM Tris/HCl, pH 8.5. 4 microliter of this enzyme/heparin mixture was mixed with 1 microliter reservoir solution. The composition of the reservoir solution was 32 % (w/v) PEG4000, 0.2 M Lithium sulfate, 0.1 M Tris/HCl, pH 7.5. As a preparation of X-ray diffraction data collection, the crystals were transferred to a cryo solution composed of 32 % (w/v) PEG4000, 10 % (v/v) glycerol, 0.2 M lithium sulfate, 0.5 mM Heparin decasaccharide, 0.1 M Tris/HCl, pH 7.5.
|
分辨率 2.55 Å
R-free 0.240
|
|
7BU4
Crystal structure of CK2a1 complexed with KY49
提交 2020-04-04
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
Y49 4-(6-aminocarbonyl-8-oxidanylidene-9-phenyl-7H-purin-2-yl)benzoic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;277 K;Ethylene glycol
|
分辨率 1.70 Å
R-free 0.222
|
|
7I7Y
Crystal Structure of 30 bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
ACT ACETATE ION × 1
A1BZS 5-({2-[(4-{[(2-chloro[1,1'-biphenyl]-4-yl)methyl]amino}butyl)amino]ethyl}amino)benzo[c][2,6]naphthyridine-8-carboxamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.15 Å
R-free 0.218
|
|
7I7Z
Crystal Structure of 31 bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
A1BZR 5-({2-[(4-{[(2-chloro[1,1'-biphenyl]-4-yl)methyl]amino}butyl)amino]ethyl}amino)-N-hydroxybenzo[c][2,6]naphthyridine-8-carboxamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.35 Å
R-free 0.236
|
|
7I80
Crystal Structure of 19 bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
ACT ACETATE ION × 3
A1BZ2 5-({2-[(2-{[(2-chloro[1,1'-biphenyl]-4-yl)methyl]amino}ethyl)amino]ethyl}amino)benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.57 Å
R-free 0.222
|
|
7I81
Crystal Structure of 22 bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
A1BZ1 5-{[3-({N-[(2-chloro[1,1'-biphenyl]-4-yl)methyl]-beta-alanyl}amino)propyl]amino}benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 2.33 Å
R-free 0.304
|
|
7I82
Crystal Structure of 20 bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
A1BZ0 5-({2-[(3-{[(2-chloro[1,1'-biphenyl]-4-yl)methyl]amino}propyl)amino]ethyl}amino)benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
ACT ACETATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.73 Å
R-free 0.221
|
|
7I83
Crystal Structure of 33 bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
ACT ACETATE ION × 2
A1BZZ N~1~-[(2-chloro[1,1'-biphenyl]-4-yl)methyl]-N~4~-(2-{[(8P)-8-(1H-tetrazol-5-yl)benzo[c][2,6]naphthyridin-5-yl]amino}ethyl)butane-1,4-diamine × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.51 Å
R-free 0.223
|
|
7I84
Crystal Structure of APL1867 bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
A1BZY 5-({2-[(4-{[(2-chloro[1,1'-biphenyl]-4-yl)methyl]amino}butyl)amino]ethyl}amino)-N-(methanesulfonyl)benzo[c][2,6]naphthyridine-8-carboxamide × 1
ACT ACETATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.97 Å
R-free 0.237
|
|
7I85
Crystal Structure of 49 bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
A1B0C 5-(ethylamino)benzo[c][2,6]naphthyridine-8-carboxamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.44 Å
R-free 0.222
|
|
7I86
Crystal Structure of 23 bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
ACT ACETATE ION × 1
A1B0D 5-{[(3E)-3-({(E)-N-[(2-chloro[1,1'-biphenyl]-4-yl)methyl]-beta-alanyl}imino)propyl]amino}benzo[c][2,6]naphthyridine-8-carboxamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.32 Å
R-free 0.217
|
|
7I87
Crystal Structure of 44 bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
ACT ACETATE ION × 1
A1B0K 5-{[2-(4-{[(2-chloro[1,1'-biphenyl]-4-yl)methyl]amino}butoxy)ethyl]amino}benzo[c][2,6]naphthyridine-8-carboxamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.47 Å
R-free 0.209
|
|
7I88
Crystal Structure of 50 bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
A1B0J 5-[(2-formamidoethyl)amino]benzo[c][2,6]naphthyridine-8-carboxamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.96 Å
R-free 0.217
|
|
7I89
Crystal Structure of 54a bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
ACT ACETATE ION × 2
A1B0E 5-{[2-(4-{[(3-chlorophenyl)methyl]amino}butoxy)ethyl]amino}benzo[c][2,6]naphthyridine-8-carboxamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.49 Å
R-free 0.221
|
|
7I8A
Crystal Structure of 54f bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
A1B0F 5-({2-[4-({[3-fluoro-4-(trifluoromethoxy)phenyl]methyl}amino)butoxy]ethyl}amino)benzo[c][2,6]naphthyridine-8-carboxamide × 1
ACT ACETATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.84 Å
R-free 0.234
|
|
7I8B
Crystal Structure of 54b bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
ACT ACETATE ION × 1
A1B0G 5-{[2-(4-{[(3-chloro-4-cyclopropylphenyl)methyl]amino}butoxy)ethyl]amino}benzo[c][2,6]naphthyridine-8-carboxamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.73 Å
R-free 0.215
|
|
7I8C
Crystal Structure of 54b bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
A1B0H 5-({2-[4-({[3-chloro-4-(trifluoromethoxy)phenyl]methyl}amino)butoxy]ethyl}amino)benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
ACT ACETATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.57 Å
R-free 0.217
|
|
7I8D
Crystal Structure of 61a bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
A1B0A 5-{2-[4-({[3-chloro-4-(trifluoromethoxy)phenyl]methyl}amino)butoxy]ethoxy}benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
ACT ACETATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.38 Å
R-free 0.216
|
|
7I8E
Crystal Structure of 58d bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
A1BZ9 5-{3-[4-({[3-chloro-4-(trifluoromethoxy)phenyl]methyl}amino)butoxy]azetidin-1-yl}benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
ACT ACETATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.66 Å
R-free 0.244
|
|
7I8F
Crystal Structure of 58e bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
A1BZ8 5-{(3R)-3-[3-({[3-chloro-4-(trifluoromethoxy)phenyl]methyl}amino)propoxy]pyrrolidin-1-yl}benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
ACT ACETATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.45 Å
R-free 0.215
|
|
7I8G
Crystal Structure of 58f bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
A1BZ7 5-{(3S)-3-[3-({[3-chloro-4-(trifluoromethoxy)phenyl]methyl}amino)propoxy]pyrrolidin-1-yl}benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
ACT ACETATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.23 Å
R-free 0.201
|
|
7I8H
Crystal Structure of 58b bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
A1BZ6 5-({(2R)-1-[4-({[3-chloro-4-(trifluoromethoxy)phenyl]methyl}amino)butoxy]propan-2-yl}amino)benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
ACT ACETATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.39 Å
R-free 0.209
|
|
7I8I
Crystal Structure of 61b bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
ACT ACETATE ION × 1
A1BZ5 5-{2-[4-({[3-fluoro-4-(trifluoromethoxy)phenyl]methyl}amino)butoxy]ethoxy}benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
ADP ADENOSINE-5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.47 Å
R-free 0.208
|
|
7I8J
Crystal Structure of 61g bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
A1BZ4 5-{2-[4-({[4-chloro-3-(trifluoromethoxy)phenyl]methyl}amino)butoxy]ethoxy}benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.60 Å
R-free 0.254
|
|
7I8K
Crystal Structure of 61f bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
A1BZ3 5-{2-[4-({[3,5-difluoro-4-(trifluoromethoxy)phenyl]methyl}amino)butoxy]ethoxy}benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
ACT ACETATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.38 Å
R-free 0.230
|
|
7I8L
Crystal Structure of 61c bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
A1B0I 5-{2-[4-({[3-methyl-4-(trifluoromethoxy)phenyl]methyl}amino)butoxy]ethoxy}-1,4-dihydrobenzo[c][2,6]naphthyridine-8-carboxylic acid × 1
ADP ADENOSINE-5'-DIPHOSPHATE × 1
ACT ACETATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.48 Å
R-free 0.203
|
|
7I8M
Crystal Structure of 14 bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
ACT ACETATE ION × 2
A1B0B 4-{[3-({N-[(2-chloro[1,1'-biphenyl]-4-yl)methyl]-beta-alanyl}amino)propyl]amino}-1H-indazole-6-carboxylic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.31 Å
R-free 0.216
|
|
7I8N
Crystal Structure of 12 bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
ACT ACETATE ION × 3
A1BZX (4P)-3-{[3-({N-[(2-chloro[1,1'-biphenyl]-4-yl)methyl]-beta-alanyl}amino)propyl]amino}-4-(1H-pyrazol-5-yl)benzoic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.28 Å
R-free 0.246
|
|
7I8O
Crystal Structure of 18 bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
A1BZW 5-({2-[(4-{[(2-chloro[1,1'-biphenyl]-4-yl)methyl]amino}butyl)amino]ethyl}amino)benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
ACT ACETATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.31 Å
R-free 0.221
|
|
7I8P
Crystal Structure of 21 bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
ACT ACETATE ION × 4
A1BZV 5-({3-[(4-{[(2-chloro[1,1'-biphenyl]-4-yl)methyl]amino}butyl)amino]propyl}amino)benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.25 Å
R-free 0.236
|
|
7I8Q
Crystal Structure of 54l bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
ACT ACETATE ION × 1
A1BZU 5-[(2-{4-[({3-[(1,3-oxazol-5-yl)methyl]-5-(trifluoromethoxy)phenyl}methyl)amino]butoxy}ethyl)amino]benzo[c][2,6]naphthyridine-8-carboxamide × 1
ADP ADENOSINE-5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.66 Å
R-free 0.220
|
|
7I8R
Crystal Structure of 54m bound to CK2a
提交 2025-03-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
ACT ACETATE ION × 1
A1BZT 5-[(2-{4-[({3-[(1H-pyrazol-4-yl)methyl]-5-(trifluoromethoxy)phenyl}methyl)amino]butoxy}ethyl)amino]benzo[c][2,6]naphthyridine-8-carboxamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.72 Å
R-free 0.221
|
|
7L1X
Structure of human CK2 alpha kinase (catalytic subunit) with the inhibitor 108600.
提交 2020-12-15
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–335(334 aa)
片段:Catalytic subunit
|
未记录
|
SO4 SULFATE ION × 4
GOL GLYCEROL × 1
ON6 (2Z)-6-[(2,6-dichlorophenyl)methanesulfonyl]-2-[(4-hydroxy-3-nitrophenyl)methylidene]-2H-1,4-benzothiazin-3(4H)-one × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7.5;293 K;100 mM Tris-HCl pH 7.5
200 mM ammonium sulfate
21% PEG5000
|
分辨率 1.80 Å
R-free 0.221
|
|
7PSU
Structure of protein kinase CK2alpha mutant K198R associated with the Okur-Chung Neurodevelopmental Syndrome
提交 2021-09-23
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–391(391 aa)
|
突变:K198R
|
EDO 1,2-ETHANEDIOL × 5
SO4 SULFATE ION × 5
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;The crystallization drops were composed of a 1:1 mix of the protein solution (5 mg/mL in 500 mM NaCl, 25 mM TRIS/HCl buffer, pH 8,5) and the reservoir solution containing [0.2 M lithium sulfate, 25 % (w/v) PEG 3350 and 0.1 M Bis/TRIS/HCl, pH 6.5]. The crystals were optimized by macroseeding and transferred into a cryo-protectant solution composed of 70 microliter of the reservoir solution and 30 microliter ethylene glycol.
|
分辨率 1.77 Å
R-free 0.218
|
|
7PSU
Structure of protein kinase CK2alpha mutant K198R associated with the Okur-Chung Neurodevelopmental Syndrome
提交 2021-09-23
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–391(391 aa)
|
突变:K198R
|
EDO 1,2-ETHANEDIOL × 4
SO4 SULFATE ION × 4
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;The crystallization drops were composed of a 1:1 mix of the protein solution (5 mg/mL in 500 mM NaCl, 25 mM TRIS/HCl buffer, pH 8,5) and the reservoir solution containing [0.2 M lithium sulfate, 25 % (w/v) PEG 3350 and 0.1 M Bis/TRIS/HCl, pH 6.5]. The crystals were optimized by macroseeding and transferred into a cryo-protectant solution composed of 70 microliter of the reservoir solution and 30 microliter ethylene glycol.
|
分辨率 1.77 Å
R-free 0.218
|
|
7QGB
H. SAPIENS CK2 KINASE ALPHA SUBUNIT IN COMPLEX WITH THE ATP-COMPETITIVE INHIBITOR 5,6-DIBROMOBENZOTRIAZOLE AT PH 6.5
提交 2021-12-08
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–391(391 aa)
|
未记录
|
7M0 5,6-DIBROMOBENZOTRIAZOLE × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;290 K;20 mM sodium formate, 20 mM ammonium acetate, 20 mM sodium citrate tribasic dihydrate, 20 mM sodium potassium tartrate tetrahydrate, 20 mM sodium oxamate, 20% polyethylene glycol 550 monomethyl ester, 10% polyethylene glycol 20 000, and 0.1 M buffering solution of imidazole/MES pH 6.5
|
分辨率 2.58 Å
R-free 0.234
|
|
7QGC
H. SAPIENS CK2 KINASE ALPHA SUBUNIT IN COMPLEX WITH THE ATP-COMPETITIVE INHIBITOR 5,6-DIBROMOBENZOTRIAZOLE AT PH 5.5
提交 2021-12-08
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–391(391 aa)
|
未记录
|
7M0 5,6-DIBROMOBENZOTRIAZOLE × 1
FLC CITRATE ANION × 1
PEG DI(HYDROXYETHYL)ETHER × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;290 K;20 mM sodium formate, 20 mM ammonium acetate, 20 mM sodium citrate tribasic dihydrate, 20 mM sodium potassium tartrate tetrahydrate, 20 mM sodium oxamate, 20% polyethylene glycol 550 monomethyl ester, 10% polyethylene glycol 20 000, and 0.1 M buffering solution of imidazole/MES pH 6.5
|
分辨率 2.55 Å
R-free 0.232
|
|
7QGD
H. SAPIENS CK2 KINASE ALPHA SUBUNIT IN COMPLEX WITH THE ATP-COMPETITIVE INHIBITOR 5,6-DIBROMOBENZOTRIAZOLE AT PH 8.5
提交 2021-12-08
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–391(391 aa)
|
未记录
|
7M0 5,6-DIBROMOBENZOTRIAZOLE × 2
CL CHLORIDE ION × 1
PEG DI(HYDROXYETHYL)ETHER × 1
PG4 TETRAETHYLENE GLYCOL × 1
PGE TRIETHYLENE GLYCOL × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;290 K;20 mM sodium formate, 20 mM ammonium acetate, 20 mM sodium citrate tribasic dihydrate, 20 mM sodium potassium tartrate tetrahydrate, 20 mM sodium oxamate, 20% polyethylene glycol 550 monomethyl ester, 10% polyethylene glycol 20 000, and 0.1 M buffering solution of Tris/BICINE pH 8.5
|
分辨率 2.30 Å
R-free 0.221
|
|
7QGE
H. SAPIENS CK2 KINASE ALPHA SUBUNIT IN COMPLEX WITH THE ATP-COMPETITIVE INHIBITOR 5,6,7,8-TETRABROMOBENZOTRIAZOLE (TBBt) AT PH 8.5
提交 2021-12-08
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–391(391 aa)
|
未记录
|
TBS 4,5,6,7-TETRABROMOBENZOTRIAZOLE × 1
CL CHLORIDE ION × 1
PEG DI(HYDROXYETHYL)ETHER × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;290 K;20 mM sodium formate, 20 mM ammonium acetate, 20 mM sodium citrate tribasic dihydrate, 20 mM sodium potassium tartrate tetrahydrate, 20 mM sodium oxamate, 20% polyethylene glycol 550 monomethyl ester, 10% polyethylene glycol 20 000, and 0.1 M buffering solution of Tris/BICINE pH 8.5
|
分辨率 2.27 Å
R-free 0.205
|
|
7QUX
Crystal structure of P7C8 bound to CK2alpha
提交 2022-01-19
|
构建体不同
突变/修饰不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 A
2–329(328 aa)
|
非标准单体:是(mmCIF未提供具体位点)
|
ADP ADENOSINE-5'-DIPHOSPHATE × 1
GOL GLYCEROL × 2
MG MAGNESIUM ION × 2
SO4 SULFATE ION × 1
OUT CARBAMIC ACID × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;293 K;0.2 M Ammonium sulfate, 30 % w/v PEG 4000
|
分辨率 1.48 Å
R-free 0.204
|
|
7X4H
Crystal structure of CK2a1 complexed with AG1112
提交 2022-03-02
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
8BH 5-azanyl-3-[(~{Z})-1-cyano-2-(1~{H}-indol-3-yl)ethenyl]-1~{H}-pyrazole-4-carbonitrile × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;277 K;ethylene glycol
|
分辨率 1.77 Å
R-free 0.208
|
|
7Z39
Structure of Belumosudil bound to CK2alpha
提交 2022-03-01
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A,
|
ACT ACETATE ION × 4
ICQ 2-[3-[4-(1~{H}-indazol-5-ylamino)quinazolin-2-yl]phenoxy]-~{N}-propan-2-yl-ethanamide × 1
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;298 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 1.60 Å
R-free 0.213
|
|
7ZWE
The Crystal structure of GW8695 bound to CK2alpha
提交 2022-05-19
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
3–329(327 aa)
|
突变:K74A, K75A, K76A, R21S
|
QXZ 7-(1~{H}-indol-2-yl)-5-methyl-~{N}-(3,4,5-trimethoxyphenyl)imidazo[5,1-f][1,2,4]triazin-2-amine × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 6.5;298 K;112.5mM Mes, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.47 Å
R-free 0.226
|
|
7ZWG
The Crystal structure of RO4493940 bound to CK2alpha
提交 2022-05-19
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
R7W (5~{Z})-5-(quinolin-6-ylmethylidene)-1,3-thiazolidine-2,4-dione × 1
EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID × 1
ACT ACETATE ION × 1
NA SODIUM ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;112.5mM Mes, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.31 Å
R-free 0.203
|
|
7ZY0
Crystal structure of compound 7 bound to CK2alpha
提交 2022-05-23
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
未记录
|
KC0 2-(5-bromanyl-1~{H}-indol-3-yl)ethanenitrile × 1
ADP ADENOSINE-5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.44 Å
R-free 0.214
|
|
7ZY2
Crystal structure of compound 7 bound to CK2alpha
提交 2022-05-23
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:R21S, K74A, K75A, K76A
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 1
ACT ACETATE ION × 2
H4N 5-bromanyl-1~{H}-indole × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.51 Å
R-free 0.210
|
|
7ZY5
Crystal structure of compound 2 bound to CK2alpha
提交 2022-05-23
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
未记录
|
1NP 1-NAPHTHOL × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.82 Å
R-free 0.219
|
|
7ZY5
Crystal structure of compound 2 bound to CK2alpha
提交 2022-05-23
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
未记录
|
1NP 1-NAPHTHOL × 2
ACT ACETATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.82 Å
R-free 0.219
|
|
7ZY8
Crystal structure of compound 2 bound to CK2alpha
提交 2022-05-24
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.85 Å
R-free 0.219
|
|
7ZY8
Crystal structure of compound 2 bound to CK2alpha
提交 2022-05-24
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
2–329(328 aa)
片段:residues 2-329 and N-terminal extension GSMDIEFDDDADDDGSGSGSGSGS
|
突变:R21S
|
PO4 PHOSPHATE ION × 2
ACT ACETATE ION × 2
KE0 3-[3,5-bis(chloranyl)phenyl]propan-1-amine × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.85 Å
R-free 0.219
|
|
7ZYD
Structure of Compound 6 Bound to CK2alpha
提交 2022-05-24
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:R21S, K74A, K75A, K76A
|
ACT ACETATE ION × 2
ATP ADENOSINE-5'-TRIPHOSPHATE × 1
KD6 5-bromanyl-6-chloranyl-1~{H}-indole × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.40 Å
R-free 0.214
|
|
7ZYK
Compound 9 Bound to CK2alpha
提交 2022-05-25
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:R21S, K74A, K75A, K76A
|
ADP ADENOSINE-5'-DIPHOSPHATE × 1
KEC 2-(5-bromanyl-6-chloranyl-1~{H}-indol-3-yl)ethanenitrile × 1
ACT ACETATE ION × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.31 Å
R-free 0.206
|
|
7ZYO
Compound 9 Bound to CK2alpha
提交 2022-05-25
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:R21S, K74A, K75A, K76A
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 1
ACT ACETATE ION × 2
KEX 5-bromanyl-6-chloranyl-3-(1~{H}-1,2,3,4-tetrazol-5-ylmethyl)-1~{H}-indole × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.58 Å
R-free 0.204
|
|
7ZYR
Compound 20 Bound to CK2alpha
提交 2022-05-25
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:R21S, K74A, K75A, K76A
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 1
ACT ACETATE ION × 4
KF6 5-bromanyl-6-chloranyl-3-(1~{H}-pyrrol-2-ylmethyl)-1~{H}-indole × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;298 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.85 Å
R-free 0.209
|
|
8AE7
The strucuture of Compound 15 bound to CK2alpha
提交 2022-07-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
GOL GLYCEROL × 1
ACT ACETATE ION × 1
LVU 2-[5,6-bis(bromanyl)-1H-indazol-3-yl]ethanenitrile × 1
ADP ADENOSINE-5'-DIPHOSPHATE × 1
MG MAGNESIUM ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.28 Å
R-free 0.232
|
|
8AEC
Structure of Compound 17 bound to CK2alpha
提交 2022-07-12
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:R21S, K74A, K75A, K76A
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 1
ACT ACETATE ION × 2
LW3 2-(5-bromanyl-6-chloranyl-1H-indazol-3-yl)ethanenitrile × 1
PO4 PHOSPHATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.09 Å
R-free 0.209
|
|
8AEK
Structure of Compound 14 bound to CK2alpha
提交 2022-07-13
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:R21S, K74A, K75A, K76A
|
LVL 2-[5-(trifluoromethyl)-1H-indol-3-yl]ethanenitrile × 1
ATP ADENOSINE-5'-TRIPHOSPHATE × 1
ACT ACETATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.65 Å
R-free 0.198
|
|
8AEM
Structure of Compound 13 bound to CK2alpha
提交 2022-07-13
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
未记录
|
ACT ACETATE ION × 6
LVF 2-(5-chloranyl-1H-indol-3-yl)ethanenitrile × 1
ATP ADENOSINE-5'-TRIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;112.5mM Mes pH 6.5, 35% glycerol ethoxylate, 180 mM ammonium acetate
|
分辨率 1.60 Å
R-free 0.212
|
|
8BGC
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with compound 2 (AA-CS-9-003)
提交 2022-10-27
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 4
QIA 5-[(phenylmethyl)amino]pyrimido[4,5-c]quinoline-8-carboxylic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;293 K;0.2 M ammonia sulphate 0.1 M bis-tris pH 5.5 23-26% PEG 3350
|
分辨率 2.80 Å
R-free 0.253
|
|
8BGC
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with compound 2 (AA-CS-9-003)
提交 2022-10-27
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 6
QIA 5-[(phenylmethyl)amino]pyrimido[4,5-c]quinoline-8-carboxylic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;293 K;0.2 M ammonia sulphate 0.1 M bis-tris pH 5.5 23-26% PEG 3350
|
分辨率 2.80 Å
R-free 0.253
|
|
8C5Q
CK2 kinase bound to inhibitor AB668
提交 2023-01-10
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 6
TL0 2-methylpropyl 5-fluoranyl-3-[1-[[1-[2-[[4-(2-methylpropyl)phenyl]sulfonylamino]ethyl]piperidin-4-yl]methyl]-1,2,3-triazol-4-yl]-1~{H}-indole-2-carboxylate × 1
GOL GLYCEROL × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;286 K;33% polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5
|
分辨率 2.50 Å
R-free 0.255
|
|
8C5Q
CK2 kinase bound to inhibitor AB668
提交 2023-01-10
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 6
TL0 2-methylpropyl 5-fluoranyl-3-[1-[[1-[2-[[4-(2-methylpropyl)phenyl]sulfonylamino]ethyl]piperidin-4-yl]methyl]-1,2,3-triazol-4-yl]-1~{H}-indole-2-carboxylate × 1
GOL GLYCEROL × 1
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;286 K;33% polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5
|
分辨率 2.50 Å
R-free 0.255
|
|
8C6L
Human protein kinase CK2 alpha in complex with CK2-TN01
提交 2023-01-12
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–336(336 aa)
片段:kinase domain (residues 1-337)
|
未记录
|
EDO 1,2-ETHANEDIOL × 1
TO6 5-azanyl-3-[(~{Z})-1-cyano-2-(3-methoxy-4-oxidanyl-phenyl)ethenyl]-3~{H}-pyrazole-4-carbonitrile × 1
SO4 SULFATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;32% PEG4000, 0.2 M Lithium Sulfate
|
分辨率 1.80 Å
R-free 0.209
|
|
8C6M
Human protein kinase CK2 alpha in complex with CK2-TN02
提交 2023-01-12
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–336(336 aa)
片段:kinase domain (residues 1-337)
|
未记录
|
TNO (5~{Z})-5-[(3-methoxy-4-oxidanyl-phenyl)methylidene]-1,3-thiazolidine-2,4-dione × 1
SO4 SULFATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;32% PEG4000, 0.2 M Lithium Sulfate
|
分辨率 1.80 Å
R-free 0.202
|
|
8C6N
Human protein kinase CK2 alpha in complex with CK2-TN03
提交 2023-01-12
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–336(336 aa)
片段:kinase domain (residues 1-337)
|
未记录
|
TN0 (2~{Z},5~{Z})-5-[(4-methoxy-3-oxidanyl-phenyl)methylidene]-2-phenylimino-1,3-thiazolidin-4-one × 1
SO4 SULFATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;32% PEG4000, 0.2 M Lithium Sulfate
|
分辨率 2.05 Å
R-free 0.218
|
|
8P05
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with Leucettinib-92
提交 2023-05-09
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 7
WAK (4~{Z})-2-(1-adamantylamino)-4-(1,3-benzothiazol-6-ylmethylidene)-1~{H}-imidazol-5-one × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 5.5;293 K;0.2 M ammonia sulphate 0.1 M bis-tris pH 5.5 23-26% PEG 3350
|
分辨率 2.45 Å
R-free 0.255
|
|
8P05
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with Leucettinib-92
提交 2023-05-09
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 5
WAK (4~{Z})-2-(1-adamantylamino)-4-(1,3-benzothiazol-6-ylmethylidene)-1~{H}-imidazol-5-one × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 5.5;293 K;0.2 M ammonia sulphate 0.1 M bis-tris pH 5.5 23-26% PEG 3350
|
分辨率 2.45 Å
R-free 0.255
|
|
8P06
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with 5-((2-(4H-1,2,4-triazol-4-yl)pyridin-4-yl)amino)-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidine-3-carbonitrile
提交 2023-05-09
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 4
WAU 7-(cyclopropylamino)-5-[[2-(1,2,4-triazol-4-yl)pyridin-4-yl]amino]pyrazolo[1,5-a]pyrimidine-3-carbonitrile × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;293 K;0.2 M ammonia sulphate 0.1 M bis-tris pH 5.5 23-26% PEG 3350
|
分辨率 2.40 Å
R-free 0.237
|
|
8P06
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with 5-((2-(4H-1,2,4-triazol-4-yl)pyridin-4-yl)amino)-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidine-3-carbonitrile
提交 2023-05-09
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 4
WAU 7-(cyclopropylamino)-5-[[2-(1,2,4-triazol-4-yl)pyridin-4-yl]amino]pyrazolo[1,5-a]pyrimidine-3-carbonitrile × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;293 K;0.2 M ammonia sulphate 0.1 M bis-tris pH 5.5 23-26% PEG 3350
|
分辨率 2.40 Å
R-free 0.237
|
|
8P07
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with 5-((3-(4H-1,2,4-triazol-4-yl)phenyl)amino)-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidine-3-carbonitrile
提交 2023-05-09
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 6
WAP 7-(cyclopropylamino)-5-[[3-(1,2,4-triazol-4-yl)phenyl]amino]pyrazolo[1,5-a]pyrimidine-3-carbonitrile × 1
EDO 1,2-ETHANEDIOL × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;293 K;0.2 M ammonia sulphate 0.1 M bis-tris pH 5.5 23-26% PEG 3350
|
分辨率 2.40 Å
R-free 0.251
|
|
8P07
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with 5-((3-(4H-1,2,4-triazol-4-yl)phenyl)amino)-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidine-3-carbonitrile
提交 2023-05-09
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 6
WAP 7-(cyclopropylamino)-5-[[3-(1,2,4-triazol-4-yl)phenyl]amino]pyrazolo[1,5-a]pyrimidine-3-carbonitrile × 1
EDO 1,2-ETHANEDIOL × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;293 K;0.2 M ammonia sulphate 0.1 M bis-tris pH 5.5 23-26% PEG 3350
|
分辨率 2.40 Å
R-free 0.251
|
|
8PVO
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric compound FG5
提交 2023-07-18
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 9
EDO 1,2-ETHANEDIOL × 3
FW3 2-[1-(1,3-benzothiazol-6-ylsulfonyl)piperidin-4-yl]-~{N}-[(3-chloranyl-4-phenyl-phenyl)methyl]ethanamine × 1
NA SODIUM ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 5.5;293 K;0.2 M ammonia sulphate 0.1 M bis-tris pH 5.5 23-26% PEG 3350
|
分辨率 2.25 Å
R-free 0.253
|
|
8PVO
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric compound FG5
提交 2023-07-18
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 12
EDO 1,2-ETHANEDIOL × 1
FW3 2-[1-(1,3-benzothiazol-6-ylsulfonyl)piperidin-4-yl]-~{N}-[(3-chloranyl-4-phenyl-phenyl)methyl]ethanamine × 1
NA SODIUM ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 5.5;293 K;0.2 M ammonia sulphate 0.1 M bis-tris pH 5.5 23-26% PEG 3350
|
分辨率 2.25 Å
R-free 0.253
|
|
8PVP
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric compound FGJG18
提交 2023-07-18
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
FWU ~{N}-[5-[(3-chloranyl-4-phenyl-phenyl)methylamino]pentyl]isoquinoline-5-sulfonamide × 1
SO4 SULFATE ION × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;293 K;0.2 M ammonia sulphate 0.1 M bis-tris pH 5.5 23-26% PEG 3350
|
分辨率 2.60 Å
R-free 0.253
|
|
8PVP
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric compound FGJG18
提交 2023-07-18
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
FWU ~{N}-[5-[(3-chloranyl-4-phenyl-phenyl)methylamino]pentyl]isoquinoline-5-sulfonamide × 1
SO4 SULFATE ION × 7
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;293 K;0.2 M ammonia sulphate 0.1 M bis-tris pH 5.5 23-26% PEG 3350
|
分辨率 2.60 Å
R-free 0.253
|
|
8QQB
Crystal structure of protein kinase CK2 catalytic subunit in complex with a Dibromo Dihydro Dibenzofuranone derivative
提交 2023-10-04
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白同源多聚体
同源多聚体;蛋白 × 2
PDB 声明:dimeric
|
链 A
1–335(335 aa)
链 B
1–335(335 aa)
|
未记录
|
EDO 1,2-ETHANEDIOL × 3
WJE (4~{Z})-7,9-bis(bromanyl)-8-oxidanyl-4-(phenylazanylmethylidene)-1,2-dihydrodibenzofuran-3-one × 2
SO4 SULFATE ION × 8
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;Initial drops were prepared by mixing two parts of a solution of 5 mg per mL CK2alpha1-335 including 1 mM 12c together with one part of the reservoir solution containing 30 % (weight per volume), PEG8000, 0.2 M (NH4)2SO4, and 0.1 M sodium cacodylate, pH 6.5. Crystallization was induced by microseeding.
|
分辨率 2.26 Å
R-free 0.239
|
|
8QWY
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with 4-(6-((5-isopropoxy-2-methoxyphenyl)amino)pyrazin-2-yl)benzoic acid
提交 2023-10-20
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 6
X59 4-[6-[(2-methoxy-5-propan-2-yloxy-phenyl)amino]pyrazin-2-yl]benzoic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 5.5;293 K;0.2 M ammonia sulphate
0.1 M bis-tris pH 5.5
23-26% PEG 335
|
分辨率 2.60 Å
R-free 0.251
|
|
8QWY
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with 4-(6-((5-isopropoxy-2-methoxyphenyl)amino)pyrazin-2-yl)benzoic acid
提交 2023-10-20
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 6
X59 4-[6-[(2-methoxy-5-propan-2-yloxy-phenyl)amino]pyrazin-2-yl]benzoic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 5.5;293 K;0.2 M ammonia sulphate
0.1 M bis-tris pH 5.5
23-26% PEG 335
|
分辨率 2.60 Å
R-free 0.251
|
|
8QWZ
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with 4-(6-(6-isopropoxy-1H-indol-1-yl)pyrazin-2-yl)benzoic acid
提交 2023-10-20
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 5
X5E 4-[6-(6-propan-2-yloxyindol-1-yl)pyrazin-2-yl]benzoic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 5.5;293 K;0.2 M ammonia sulphate
0.1 M bis-tris pH 5.5
23-26% PEG 3350
|
分辨率 2.60 Å
R-free 0.245
|
|
8QWZ
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with 4-(6-(6-isopropoxy-1H-indol-1-yl)pyrazin-2-yl)benzoic acid
提交 2023-10-20
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 6
X5E 4-[6-(6-propan-2-yloxyindol-1-yl)pyrazin-2-yl]benzoic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION;pH 5.5;293 K;0.2 M ammonia sulphate
0.1 M bis-tris pH 5.5
23-26% PEG 3350
|
分辨率 2.60 Å
R-free 0.245
|
|
9EPV
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC333
提交 2024-03-20
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 6
EDO 1,2-ETHANEDIOL × 2
A1H6H 5-[[2-[(3-chloranyl-4-phenyl-phenyl)methylamino]-7-azaspiro[3.5]nonan-7-yl]sulfonyl]-1,3-dimethyl-benzimidazol-2-one × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;0.2 M ammonia sulphate
0.1 M bis-tris pH 5.5
23-26% PEG 3350
|
分辨率 2.30 Å
R-free 0.248
|
|
9EPV
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC333
提交 2024-03-20
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 7
EDO 1,2-ETHANEDIOL × 4
A1H6H 5-[[2-[(3-chloranyl-4-phenyl-phenyl)methylamino]-7-azaspiro[3.5]nonan-7-yl]sulfonyl]-1,3-dimethyl-benzimidazol-2-one × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;0.2 M ammonia sulphate
0.1 M bis-tris pH 5.5
23-26% PEG 3350
|
分辨率 2.30 Å
R-free 0.248
|
|
9EPW
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC3336
提交 2024-03-20
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 5
A1H6F ~{N}-[(3-chloranyl-4-phenyl-phenyl)methyl]-2-[1-(3-methylquinolin-8-yl)sulfonylpiperidin-4-yl]ethanamine × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;0.2 M ammonia sulphate 0.1 M bis-tris pH 5.5 23-26% PEG 3350
|
分辨率 2.30 Å
R-free 0.308
|
|
9EPX
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC3331
提交 2024-03-20
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 6
EDO 1,2-ETHANEDIOL × 1
A1H6E 7-[(2-chloranyl-1,3-benzothiazol-6-yl)sulfonyl]-~{N}-[(3-chloranyl-4-phenyl-phenyl)methyl]-7-azaspiro[3.5]nonan-2-amine × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;0.1 M bis-tris pH 5.5
23-26% (v/v) PEG 3350
0.2 M ammonia sulphate
|
分辨率 2.60 Å
R-free 0.246
|
|
9EPX
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC3331
提交 2024-03-20
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 10
A1H6E 7-[(2-chloranyl-1,3-benzothiazol-6-yl)sulfonyl]-~{N}-[(3-chloranyl-4-phenyl-phenyl)methyl]-7-azaspiro[3.5]nonan-2-amine × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;0.1 M bis-tris pH 5.5
23-26% (v/v) PEG 3350
0.2 M ammonia sulphate
|
分辨率 2.60 Å
R-free 0.246
|
|
9EPY
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC3330
提交 2024-03-20
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 9
EDO 1,2-ETHANEDIOL × 1
A1H6G ~{N}-[(3-chloranyl-4-phenyl-phenyl)methyl]-7-[(2-methyl-1,3-benzothiazol-6-yl)sulfonyl]-7-azaspiro[3.5]nonan-2-amine × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;293 K;0.1 M bis-tris pH 5.5
23-26% (v/v) PEG 3350
0.2 M ammonia sulphate
|
分辨率 2.65 Å
R-free 0.269
|
|
9EPY
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC3330
提交 2024-03-20
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 8
EDO 1,2-ETHANEDIOL × 1
A1H6G ~{N}-[(3-chloranyl-4-phenyl-phenyl)methyl]-7-[(2-methyl-1,3-benzothiazol-6-yl)sulfonyl]-7-azaspiro[3.5]nonan-2-amine × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;293 K;0.1 M bis-tris pH 5.5
23-26% (v/v) PEG 3350
0.2 M ammonia sulphate
|
分辨率 2.65 Å
R-free 0.269
|
|
9EPZ
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC3337
提交 2024-03-20
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 7
EDO 1,2-ETHANEDIOL × 1
A1H6I ~{N}-[(3-chloranyl-4-phenyl-phenyl)methyl]-2-[1-[(2-methyl-1,3-benzothiazol-6-yl)sulfonyl]piperidin-4-yl]ethanamine × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;293 K;0.1 M bis-tris pH 5.5
23-26% (v/v) PEG 3350
0.2 M ammonia sulphate
|
分辨率 2.65 Å
R-free 0.245
|
|
9EPZ
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC3337
提交 2024-03-20
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 10
A1H6I ~{N}-[(3-chloranyl-4-phenyl-phenyl)methyl]-2-[1-[(2-methyl-1,3-benzothiazol-6-yl)sulfonyl]piperidin-4-yl]ethanamine × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;293 K;0.1 M bis-tris pH 5.5
23-26% (v/v) PEG 3350
0.2 M ammonia sulphate
|
分辨率 2.65 Å
R-free 0.245
|
|
9EQ0
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGJG12
提交 2024-03-20
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 3
A1H6D ~{N}-[4-[(3-chloranyl-4-phenyl-phenyl)methylamino]butyl]isoquinoline-5-sulfonamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;0.1 M bis-tris pH 5.5
23-26% (v/v) PEG 3350
0.2 M ammonia sulphate
|
分辨率 3.15 Å
R-free 0.274
|
|
9EQ0
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGJG12
提交 2024-03-20
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 3
A1H6D ~{N}-[4-[(3-chloranyl-4-phenyl-phenyl)methylamino]butyl]isoquinoline-5-sulfonamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;0.1 M bis-tris pH 5.5
23-26% (v/v) PEG 3350
0.2 M ammonia sulphate
|
分辨率 3.15 Å
R-free 0.274
|
|
9EQ1
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGJM24
提交 2024-03-20
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 7
EDO 1,2-ETHANEDIOL × 1
A1H6J methyl 2-[1,3-benzothiazol-6-ylsulfonyl-[5-[(3-chloranyl-4-phenyl-phenyl)methylamino]pentyl]amino]ethanoate × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;293 K;0.1 M bis-tris pH 5.5
23-26% (v/v) PEG 3350
0.2 M ammonia sulphate
|
分辨率 3.00 Å
R-free 0.251
|
|
9EQ1
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGJM24
提交 2024-03-20
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 12
EDO 1,2-ETHANEDIOL × 1
A1H6J methyl 2-[1,3-benzothiazol-6-ylsulfonyl-[5-[(3-chloranyl-4-phenyl-phenyl)methylamino]pentyl]amino]ethanoate × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;293 K;0.1 M bis-tris pH 5.5
23-26% (v/v) PEG 3350
0.2 M ammonia sulphate
|
分辨率 3.00 Å
R-free 0.251
|
|
9EZG
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with 5-((4-((2-aminoethyl)(ethyl)amino)-3-(4H-1,2,4-triazol-4-yl)phenyl)amino)-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidine-3-carbonitrile
提交 2024-04-12
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 10
A1H8C 5-[[4-[2-azanylethyl(ethyl)amino]-3-(1,2,4-triazol-4-yl)phenyl]amino]-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidine-3-carbonitrile × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;293 K;0.1 M bis-tris pH 5.5
23-26% (v/v) PEG 3350
0.2 M ammonia sulphate
|
分辨率 2.18 Å
R-free 0.242
|
|
9EZG
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with 5-((4-((2-aminoethyl)(ethyl)amino)-3-(4H-1,2,4-triazol-4-yl)phenyl)amino)-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidine-3-carbonitrile
提交 2024-04-12
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 7
A1H8C 5-[[4-[2-azanylethyl(ethyl)amino]-3-(1,2,4-triazol-4-yl)phenyl]amino]-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidine-3-carbonitrile × 1
EDO 1,2-ETHANEDIOL × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;293 K;0.1 M bis-tris pH 5.5
23-26% (v/v) PEG 3350
0.2 M ammonia sulphate
|
分辨率 2.18 Å
R-free 0.242
|
|
9FBL
Structure of human protein kinase CK2 catalytic subunit (CK2alpha, CSNK2A1 gene product) in complex with the cyclic peptidomimetic compound 15 discovered by high-throughput screening
提交 2024-05-14
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 A
1–335(335 aa)
|
未记录
|
NIO NICOTINIC ACID × 1
SO4 SULFATE ION × 6
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;293 K;protein solution: 97.5 mikroliter CK2alpha-1-335 solution (7 mg/ml in 500 mmol/l NaCl, 25 mmol/l Tris/HCl, pH 8.5) was mixed with 2.5 mikroliter 20 millimolar FMP35 in DMSO and incubated for 30 min.
reservoir: 1.5 mol/l lithium sulphate, 100 mM sodium HEPES buffer pH 7.5.
crystallization drop: 200 nanoliter protein solution plus 100 nanoliter reservoir.
|
分辨率 2.18 Å
R-free 0.266
|
|
9FBL
Structure of human protein kinase CK2 catalytic subunit (CK2alpha, CSNK2A1 gene product) in complex with the cyclic peptidomimetic compound 15 discovered by high-throughput screening
提交 2024-05-14
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 B
1–335(335 aa)
|
未记录
|
NIO NICOTINIC ACID × 1
SO4 SULFATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;293 K;protein solution: 97.5 mikroliter CK2alpha-1-335 solution (7 mg/ml in 500 mmol/l NaCl, 25 mmol/l Tris/HCl, pH 8.5) was mixed with 2.5 mikroliter 20 millimolar FMP35 in DMSO and incubated for 30 min.
reservoir: 1.5 mol/l lithium sulphate, 100 mM sodium HEPES buffer pH 7.5.
crystallization drop: 200 nanoliter protein solution plus 100 nanoliter reservoir.
|
分辨率 2.18 Å
R-free 0.266
|
|
9FBL
Structure of human protein kinase CK2 catalytic subunit (CK2alpha, CSNK2A1 gene product) in complex with the cyclic peptidomimetic compound 15 discovered by high-throughput screening
提交 2024-05-14
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 3
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 C
1–335(335 aa)
|
未记录
|
NIO NICOTINIC ACID × 1
SO4 SULFATE ION × 4
NA SODIUM ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;293 K;protein solution: 97.5 mikroliter CK2alpha-1-335 solution (7 mg/ml in 500 mmol/l NaCl, 25 mmol/l Tris/HCl, pH 8.5) was mixed with 2.5 mikroliter 20 millimolar FMP35 in DMSO and incubated for 30 min.
reservoir: 1.5 mol/l lithium sulphate, 100 mM sodium HEPES buffer pH 7.5.
crystallization drop: 200 nanoliter protein solution plus 100 nanoliter reservoir.
|
分辨率 2.18 Å
R-free 0.266
|
|
9FBM
Structure of human protein kinase CK2 catalytic subunit (CK2alpha, CSNK2A1 gene product) in complex with the cyclic peptidomimetic compound 12 discovered by high-throughput screening
提交 2024-05-14
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 A
1–335(335 aa)
|
未记录
|
NIO NICOTINIC ACID × 1
SO4 SULFATE ION × 4
NA SODIUM ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;293 K;protein solution: 97.5 mikroliter CK2alpha-1-335 solution (7 mg/ml in 500 mmol/l NaCl, 25 mmol/l Tris/HCl, pH 8.5) was mixed with 2.5 mikroliter 20 millimolar FMP37 in DMSO and incubated for 30 min.
reservoir: 1.5 mol/l lithium sulphate, 100 mM sodium HEPES buffer, pH 7.5.
crystallization drop: 4 microliter protein solution plus 2 microliter reservoir.
|
分辨率 2.05 Å
R-free 0.239
|
|
9FBM
Structure of human protein kinase CK2 catalytic subunit (CK2alpha, CSNK2A1 gene product) in complex with the cyclic peptidomimetic compound 12 discovered by high-throughput screening
提交 2024-05-14
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 B
1–335(335 aa)
|
未记录
|
NIO NICOTINIC ACID × 1
SO4 SULFATE ION × 3
NA SODIUM ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;293 K;protein solution: 97.5 mikroliter CK2alpha-1-335 solution (7 mg/ml in 500 mmol/l NaCl, 25 mmol/l Tris/HCl, pH 8.5) was mixed with 2.5 mikroliter 20 millimolar FMP37 in DMSO and incubated for 30 min.
reservoir: 1.5 mol/l lithium sulphate, 100 mM sodium HEPES buffer, pH 7.5.
crystallization drop: 4 microliter protein solution plus 2 microliter reservoir.
|
分辨率 2.05 Å
R-free 0.239
|
|
9FBM
Structure of human protein kinase CK2 catalytic subunit (CK2alpha, CSNK2A1 gene product) in complex with the cyclic peptidomimetic compound 12 discovered by high-throughput screening
提交 2024-05-14
|
构建体不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 3
蛋白异源复合物
异源复合物;蛋白 × 2
PDB 声明:dimeric
|
链 C
1–335(335 aa)
|
未记录
|
NIO NICOTINIC ACID × 1
SO4 SULFATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;293 K;protein solution: 97.5 mikroliter CK2alpha-1-335 solution (7 mg/ml in 500 mmol/l NaCl, 25 mmol/l Tris/HCl, pH 8.5) was mixed with 2.5 mikroliter 20 millimolar FMP37 in DMSO and incubated for 30 min.
reservoir: 1.5 mol/l lithium sulphate, 100 mM sodium HEPES buffer, pH 7.5.
crystallization drop: 4 microliter protein solution plus 2 microliter reservoir.
|
分辨率 2.05 Å
R-free 0.239
|
|
9FYF
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with TR06772818
提交 2024-07-03
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 8
A1IG6 ~{N}-[5-[[3-cyano-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidin-5-yl]amino]-4-fluoranyl-2-[(3~{S})-3-(methylamino)piperidin-1-yl]phenyl]propanamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;293 K;0.1 M bis-tris pH 5.5
23-26% (v/v) PEG 3350
0.2 M ammonia sulphate
|
分辨率 2.70 Å
R-free 0.249
|
|
9FYF
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with TR06772818
提交 2024-07-03
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 7
A1IG6 ~{N}-[5-[[3-cyano-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidin-5-yl]amino]-4-fluoranyl-2-[(3~{S})-3-(methylamino)piperidin-1-yl]phenyl]propanamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;293 K;0.1 M bis-tris pH 5.5
23-26% (v/v) PEG 3350
0.2 M ammonia sulphate
|
分辨率 2.70 Å
R-free 0.249
|
|
9GCW
Crystal structure of protein kinase CK2 catalytic subunit (csnk2a1 gene product) in complex with the dual CK2/HDAC inhibitor IOR-160
提交 2024-08-02
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
A1IKB 5-[[8-(oxidanylamino)-8-oxidanylidene-octyl]amino]benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293.15 K;1 MIKROLITER OF A CK2ALPHA/INHIBITOR MIXTURE (COMPOSITION: 4.5 MG/ML CK2ALPHA ENZYME, 1 MILLIMOLAR INHIBITOR, 10 % DIMETHYL SULFOXIDE, 450 MM NACL, 22.5 MM TRIS/HCL, PH 8.5) WAS MIXED WITH 1 MIKROLITER RESERVOIR SOLUTION (COMPOSITION: 4.2 M sodium chloride, 0.1 M SODIUM Citrate, PH 5.5) FOLLOWED BY VAPOUR DIFFUSION EQUILIBRATION AGAINST MICROLITER OF THE RESERVOIR SOLUTION.
|
分辨率 1.86 Å
R-free 0.233
|
|
9H97
Structure of protein kinase CK2 catalytic subunit CK2alpha (CSNK2A1 gene product) in complex with the indenoindole-type inhibitor MC11 at high-salt conditions
提交 2024-10-30
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
A1ITG 1,2,3,4-tetrakis(bromanyl)-5-propan-2-yl-7,8-dihydro-6~{H}-indeno[1,2-b]indole-9,10-dione × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;293 K;Reservoir: 4.2 M NaCl, 0.1 M sodium citrat pH 8.5
Protein 5 mg per mL including 1 mM MC11 in DMSO
Drop: Mixing 1 microliter protein incl. MC11 with 1 microliter reservoir solution
|
分辨率 1.70 Å
R-free 0.231
|
|
9H9D
Protein kinase CK2 catalytic subunit alpha (CSNK2A1 gene product) in complex the the indenoindole-type inhibitor MC11
提交 2024-10-30
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白同源多聚体
同源多聚体;蛋白 × 2
PDB 声明:dimeric
|
链 A
1–335(335 aa)
链 B
1–335(335 aa)
|
未记录
|
A1ITG 1,2,3,4-tetrakis(bromanyl)-5-propan-2-yl-7,8-dihydro-6~{H}-indeno[1,2-b]indole-9,10-dione × 2
SO4 SULFATE ION × 8
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;Reservoir: 0.2 M Lithium sulphate, 0.1 M BIS-TRIS-HCl, pH 6.5, 30 % PEG 3350
Inititial drop: 4 microliter CK2alpha 5 mg per mL incl. 1 mM MC11 in DMSO mixed with 2 microliter reservoir.
|
分辨率 2.09 Å
R-free 0.229
|
|
9HKP
Protein kinase CK2 with small molecule ligands
提交 2024-12-03
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
A1IVQ [1-[2-[[4-(2-methylpropyl)phenyl]sulfonylamino]ethyl]piperidin-4-yl]methyl 1~{H}-indole-3-carboxylate × 1
SO4 SULFATE ION × 7
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5
|
分辨率 2.82 Å
R-free 0.261
|
|
9HKP
Protein kinase CK2 with small molecule ligands
提交 2024-12-03
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
A1IVQ [1-[2-[[4-(2-methylpropyl)phenyl]sulfonylamino]ethyl]piperidin-4-yl]methyl 1~{H}-indole-3-carboxylate × 1
SO4 SULFATE ION × 7
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5
|
分辨率 2.82 Å
R-free 0.261
|
|
9HKS
Protein Kinase CK2 and small molecule ligands
提交 2024-12-04
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 4
A1IVR 2-(5-chloranyl-1~{H}-indol-3-yl)ethanamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5
|
分辨率 2.40 Å
R-free 0.262
|
|
9HKS
Protein Kinase CK2 and small molecule ligands
提交 2024-12-04
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 3
A1IVR 2-(5-chloranyl-1~{H}-indol-3-yl)ethanamide × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5
|
分辨率 2.40 Å
R-free 0.262
|
|
9HL0
Protein Kinase CK2 and small molecule ligands
提交 2024-12-04
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 7
PEG DI(HYDROXYETHYL)ETHER × 1
A1IVS 5,7-bis(fluoranyl)-1~{H}-indole × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5.
|
分辨率 2.63 Å
R-free 0.280
|
|
9HL0
Protein Kinase CK2 and small molecule ligands
提交 2024-12-04
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 4
PEG DI(HYDROXYETHYL)ETHER × 1
A1IVS 5,7-bis(fluoranyl)-1~{H}-indole × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5.
|
分辨率 2.63 Å
R-free 0.280
|
|
9HL7
Protein Kinase CK2 and small molecule ligands
提交 2024-12-04
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 7
A1IVT 2-(6-chloranyl-1~{H}-indol-3-yl)ethanoic acid × 2
DMS DIMETHYL SULFOXIDE × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5.
|
分辨率 2.28 Å
R-free 0.265
|
|
9HL7
Protein Kinase CK2 and small molecule ligands
提交 2024-12-04
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 C
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 7
A1IVT 2-(6-chloranyl-1~{H}-indol-3-yl)ethanoic acid × 2
DMS DIMETHYL SULFOXIDE × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5.
|
分辨率 2.28 Å
R-free 0.265
|
|
9HPH
Protein kinase CK2 bound to KDX1381
提交 2024-12-13
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 10
PEG DI(HYDROXYETHYL)ETHER × 2
A1IWI ~{N}-[2-[4-[[4-(2-ethanoyl-5-fluoranyl-1~{H}-indol-3-yl)-1,2,3-triazol-1-yl]methyl]piperidin-1-yl]ethyl]-4-(2-fluoranyl-6-oxidanyl-phenyl)benzenesulfonamide × 1
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33% polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5
|
分辨率 2.16 Å
R-free 0.275
|
|
9HPH
Protein kinase CK2 bound to KDX1381
提交 2024-12-13
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 14
A1IWI ~{N}-[2-[4-[[4-(2-ethanoyl-5-fluoranyl-1~{H}-indol-3-yl)-1,2,3-triazol-1-yl]methyl]piperidin-1-yl]ethyl]-4-(2-fluoranyl-6-oxidanyl-phenyl)benzenesulfonamide × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33% polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5
|
分辨率 2.16 Å
R-free 0.275
|
|
9HXU
Protein kinase CK2 catalytic subunit alpha (CSNK2A1 gene product) in complex with F2X-Entry screen fragment C02
提交 2025-01-08
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白同源多聚体
同源多聚体;蛋白 × 2
PDB 声明:dimeric
|
链 A
1–335(335 aa)
链 B
1–335(335 aa)
|
未记录
|
SYA 2,4,5-tris(fluoranyl)-3-methoxy-benzoic acid × 3
SO4 SULFATE ION × 7
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;Reservoir:200 mM Li2SO4, 100 mM Bis-Tris/HCl, pH 6.5, 35 % (w/v) PEG 3350
Protein/Ligand mix: 5 mg per mL CK2alpha1-335, 100 mM ligand/0.5 mM CX-4945, 10 % DMSO prequilibrated
Drop: 4 microliter protein/ligand mix, 2 microliter reservoir solution
|
分辨率 2.20 Å
R-free 0.216
|
|
9HYH
Protein kinase CK2 catalytic subunit alpha (CSNK2A1 gene product) in complex with F2X-Entry screen fragment D02 and CX-4945 (Silmitasertib)
提交 2025-01-10
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
SY4 ~{N}-[5-azanyl-2,4-bis(fluoranyl)phenyl]propane-1-sulfonamide × 1
3NG 5-[(3-chlorophenyl)amino]benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;Reservoir: 200 mM Li2SO4, 100 mM Bis-Tris/HCl, pH 6.5, 35 % PEG 3350
Protein/Ligand mix: 5 mg per mL CK2alpha1-335, 100 mM ligand, 0.5 mM CX-4945, 10 % DMSO, prequilibrated
Drop: 4 microliter protein/ligand plus 2 microliter reservoir
|
分辨率 1.96 Å
R-free 0.241
|
|
9HYH
Protein kinase CK2 catalytic subunit alpha (CSNK2A1 gene product) in complex with F2X-Entry screen fragment D02 and CX-4945 (Silmitasertib)
提交 2025-01-10
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–335(335 aa)
|
未记录
|
SY4 ~{N}-[5-azanyl-2,4-bis(fluoranyl)phenyl]propane-1-sulfonamide × 1
3NG 5-[(3-chlorophenyl)amino]benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;Reservoir: 200 mM Li2SO4, 100 mM Bis-Tris/HCl, pH 6.5, 35 % PEG 3350
Protein/Ligand mix: 5 mg per mL CK2alpha1-335, 100 mM ligand, 0.5 mM CX-4945, 10 % DMSO, prequilibrated
Drop: 4 microliter protein/ligand plus 2 microliter reservoir
|
分辨率 1.96 Å
R-free 0.241
|
|
9HZH
Protein kinase CK2 catalytic subunit alpha (CSNK2A1 gene product) in complex with F2X-Entry screen fragment F02 and CX-4945 (Silmitasertib)
提交 2025-01-13
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–335(335 aa)
|
未记录
|
SO4 SULFATE ION × 3
3NG 5-[(3-chlorophenyl)amino]benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
T9Y ethyl 5-(trifluoromethyl)-1H-pyrazole-4-carboxylate × 1
EDO 1,2-ETHANEDIOL × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;Reservoir:200 mM Li2SO4, 100 mM Bis-Tris/HCl, pH 6.5, 35 % (w/v) PEG 3350
Protein/Ligand mix: 5 mg per mL CK2alpha1-335, 100 mM ligand/0.5 mM CX-4945, 10 % DMSO prequilibrated
Drop: 4 microliter protein/ligand mix, 2 microliter reservoir solution
|
分辨率 2.07 Å
R-free 0.256
|
|
9HZH
Protein kinase CK2 catalytic subunit alpha (CSNK2A1 gene product) in complex with F2X-Entry screen fragment F02 and CX-4945 (Silmitasertib)
提交 2025-01-13
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–335(335 aa)
|
未记录
|
SO4 SULFATE ION × 3
3NG 5-[(3-chlorophenyl)amino]benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
T9Y ethyl 5-(trifluoromethyl)-1H-pyrazole-4-carboxylate × 1
EDO 1,2-ETHANEDIOL × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;Reservoir:200 mM Li2SO4, 100 mM Bis-Tris/HCl, pH 6.5, 35 % (w/v) PEG 3350
Protein/Ligand mix: 5 mg per mL CK2alpha1-335, 100 mM ligand/0.5 mM CX-4945, 10 % DMSO prequilibrated
Drop: 4 microliter protein/ligand mix, 2 microliter reservoir solution
|
分辨率 2.07 Å
R-free 0.256
|
|
9I0Z
Human protein kinase CK2 alpha in complex with TN11
提交 2025-01-15
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
3–330(328 aa)
|
未记录
|
SO4 SULFATE ION × 4
A1IYU (2~{Z},5~{Z})-5-[(4-methoxy-3-oxidanyl-phenyl)methylidene]-2-(2-methylphenyl)imino-1,3-thiazolidin-4-one × 1
EDO 1,2-ETHANEDIOL × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;32% PEG4000, 0.2 M Lithium Sulfate
|
分辨率 1.55 Å
R-free 0.194
|
|
9I10
Human protein kinase CK2 alpha in complex with TN12
提交 2025-01-15
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
3–330(328 aa)
|
未记录
|
A1IYV (2~{Z},5~{Z})-5-[(4-methoxy-3-oxidanyl-phenyl)methylidene]-2-(3-methylphenyl)imino-1,3-thiazolidin-4-one × 1
SO4 SULFATE ION × 3
EDO 1,2-ETHANEDIOL × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;32% PEG4000, 0.2 M Lithium Sulfate
|
分辨率 1.50 Å
R-free 0.193
|
|
9I11
Human protein kinase CK2 alpha in complex with TN16
提交 2025-01-15
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
3–330(328 aa)
|
未记录
|
SO4 SULFATE ION × 4
EDO 1,2-ETHANEDIOL × 2
A1IYW (2~{Z},5~{Z})-2-(3-hydroxyphenyl)imino-5-[(4-methoxy-3-oxidanyl-phenyl)methylidene]-1,3-thiazolidin-4-one × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;32% PEG4000, 0.2 M Lithium Sulfate
|
分辨率 1.60 Å
R-free 0.196
|
|
9I12
Human protein kinase CK2 alpha in complex with TN17
提交 2025-01-15
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
3–330(328 aa)
|
未记录
|
SO4 SULFATE ION × 3
A1IYX (2~{Z},5~{Z})-5-[(4-methoxy-3-oxidanyl-phenyl)methylidene]-2-(4-methoxyphenyl)imino-1,3-thiazolidin-4-one × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;32% PEG4000, 0.2 M Lithium Sulfate
|
分辨率 2.00 Å
R-free 0.223
|
|
9I13
Human protein kinase CK2 alpha in complex with TN19
提交 2025-01-15
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
3–330(328 aa)
|
未记录
|
SO4 SULFATE ION × 3
A1IYY (2~{Z},5~{Z})-2-(3-fluorophenyl)imino-5-[(4-methoxy-3-oxidanyl-phenyl)methylidene]-1,3-thiazolidin-4-one × 1
EDO 1,2-ETHANEDIOL × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;32% PEG4000, 0.2 M Lithium Sulfate
|
分辨率 1.75 Å
R-free 0.195
|
|
9I17
Human protein kinase CK2 alpha in complex with TN20
提交 2025-01-16
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
3–330(328 aa)
|
未记录
|
SO4 SULFATE ION × 4
A1IYZ (2~{Z},5~{Z})-2-(3-chlorophenyl)imino-5-[(4-methoxy-3-oxidanyl-phenyl)methylidene]-1,3-thiazolidin-4-one × 1
EDO 1,2-ETHANEDIOL × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;32% PEG4000, 0.2 M Lithium Sulfate
|
分辨率 1.55 Å
R-free 0.192
|
|
9QQX
Crystal Structure of 54k bound to CK2a
提交 2025-04-02
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
突变:K74A, K75A, K76A, R21S
|
A1I9L 5-[2-[4-[[3-aminocarbonyl-5-(trifluoromethyloxy)phenyl]methylamino]butoxy]ethylamino]benzo[c][2,6]naphthyridine-8-carboxamide × 1
ACT ACETATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.60 Å
R-free 0.245
|
|
9QRH
Protein Kinase CK2 and bivalent inhibitors
提交 2025-04-03
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
A1I9M 5-[[(3~{E})-3-[4-[2-(3,4-dichlorophenyl)ethylamino]-4-oxidanylidene-butanoyl]iminopropyl]amino]benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
SO4 SULFATE ION × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5.
|
分辨率 2.59 Å
R-free 0.236
|
|
9QRH
Protein Kinase CK2 and bivalent inhibitors
提交 2025-04-03
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
A1I9M 5-[[(3~{E})-3-[4-[2-(3,4-dichlorophenyl)ethylamino]-4-oxidanylidene-butanoyl]iminopropyl]amino]benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
SO4 SULFATE ION × 5
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5.
|
分辨率 2.59 Å
R-free 0.236
|
|
9QRI
Protein Kinase CK2 and bivalent inhibitors
提交 2025-04-03
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
A1I9N 5-[4-[[4-[2-(3,4-dichlorophenyl)ethylamino]-4-oxidanylidene-butanoyl]amino]butylamino]benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
SO4 SULFATE ION × 4
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5.
|
分辨率 2.35 Å
R-free 0.243
|
|
9QRI
Protein Kinase CK2 and bivalent inhibitors
提交 2025-04-03
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
A1I9N 5-[4-[[4-[2-(3,4-dichlorophenyl)ethylamino]-4-oxidanylidene-butanoyl]amino]butylamino]benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
SO4 SULFATE ION × 5
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5.
|
分辨率 2.35 Å
R-free 0.243
|
|
9QRJ
Protein Kinase CK2 and bivalent inhibitors
提交 2025-04-03
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 4
A1I9O 5-[6-[(3-chloranyl-4-phenyl-phenyl)methylamino]hexylamino]benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5
|
分辨率 2.73 Å
R-free 0.256
|
|
9QRJ
Protein Kinase CK2 and bivalent inhibitors
提交 2025-04-03
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 3
A1I9O 5-[6-[(3-chloranyl-4-phenyl-phenyl)methylamino]hexylamino]benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5
|
分辨率 2.73 Å
R-free 0.256
|
|
9QSR
Protein Kinase CK2 and bivalent inhibitors
提交 2025-04-07
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
A1I90 5-[7-[(3-chloranyl-4-phenyl-phenyl)methylamino]heptylamino]benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
SO4 SULFATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5.
|
分辨率 2.83 Å
R-free 0.326
|
|
9QSR
Protein Kinase CK2 and bivalent inhibitors
提交 2025-04-07
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
A1I90 5-[7-[(3-chloranyl-4-phenyl-phenyl)methylamino]heptylamino]benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
SO4 SULFATE ION × 3
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5.
|
分辨率 2.83 Å
R-free 0.326
|
|
9QSS
Protein Kinase CK2 and bivalent inhibitors
提交 2025-04-07
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
A1I9Z 5-[8-[(3-chloranyl-4-phenyl-phenyl)methylamino]octylamino]benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
SO4 SULFATE ION × 5
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5.
|
分辨率 2.88 Å
R-free 0.236
|
|
9QSS
Protein Kinase CK2 and bivalent inhibitors
提交 2025-04-07
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
A1I9Z 5-[8-[(3-chloranyl-4-phenyl-phenyl)methylamino]octylamino]benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
SO4 SULFATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5.
|
分辨率 2.88 Å
R-free 0.236
|
|
9QST
Protein Kinase CK2 and bivalent inhibitors
提交 2025-04-07
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 3
A1I91 5-[4-[3-[(3-chloranyl-4-phenyl-phenyl)methylamino]propanoylamino]butylamino]benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5.
|
分辨率 2.70 Å
R-free 0.243
|
|
9QST
Protein Kinase CK2 and bivalent inhibitors
提交 2025-04-07
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 6
A1I91 5-[4-[3-[(3-chloranyl-4-phenyl-phenyl)methylamino]propanoylamino]butylamino]benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5.
|
分辨率 2.70 Å
R-free 0.243
|
|
9QSU
Protein Kinase CK2 and bivalent inhibitors
提交 2025-04-07
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 3
A1I92 5-[4-[3-[[4-(2-methoxyphenyl)phenyl]methylamino]propanoylamino]butylamino]benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5.
|
分辨率 2.73 Å
R-free 0.258
|
|
9QSU
Protein Kinase CK2 and bivalent inhibitors
提交 2025-04-07
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 3
A1I92 5-[4-[3-[[4-(2-methoxyphenyl)phenyl]methylamino]propanoylamino]butylamino]benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5.
|
分辨率 2.73 Å
R-free 0.258
|
|
9QSV
Protein Kinase CK2 and bivalent inhibitors
提交 2025-04-07
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 3
A1I93 5-(methylamino)benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5.
|
分辨率 2.78 Å
R-free 0.273
|
|
9QSV
Protein Kinase CK2 and bivalent inhibitors
提交 2025-04-07
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–337(337 aa)
|
未记录
|
SO4 SULFATE ION × 5
A1I93 5-(methylamino)benzo[c][2,6]naphthyridine-8-carboxylic acid × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;33 % polyethylene glycol methyl ether 5000, 0.2 M ammonium sulfate, 0.1 MES pH 6.5.
|
分辨率 2.78 Å
R-free 0.273
|
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9QY7
Crystal Structure of 54e bound to CK2a
提交 2025-04-17
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
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突变:K74A, K75A, K76A, R21S
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A1JB4 5-[2-[4-[[3-chloranyl-4-(trifluoromethyloxy)phenyl]methylamino]butoxy]ethylamino]benzo[c][2,6]naphthyridine-8-carboxamide × 1
ACT ACETATE ION × 2
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;112.5 mM MES pH 6.5, 35% glycerol ethoxylate and 180 mM ammonium acetate
|
分辨率 1.39 Å
R-free 0.208
|
|
9RCX
Structure of protein kinase CK2alpha mutant T127M associated with the Okur-Chung Neurodevelopmental Syndrome
提交 2025-05-30
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–391(391 aa)
|
突变:T127M
|
SO4 SULFATE ION × 5
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;Reservoir: 200 mM Lithium sulphate, 100 mM Bis-tris, pH 6.5, 35 % PEG 3350
Protein concentrated to 5 mg per mL in 500 mM NaCl, 25 mM Tris-HCl, pH 8.5
Drop: 6 microliter protein, 2 microliter reservoir solution
|
分辨率 2.25 Å
R-free 0.245
|
|
9RCX
Structure of protein kinase CK2alpha mutant T127M associated with the Okur-Chung Neurodevelopmental Syndrome
提交 2025-05-30
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–391(391 aa)
|
突变:T127M
|
SO4 SULFATE ION × 5
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;Reservoir: 200 mM Lithium sulphate, 100 mM Bis-tris, pH 6.5, 35 % PEG 3350
Protein concentrated to 5 mg per mL in 500 mM NaCl, 25 mM Tris-HCl, pH 8.5
Drop: 6 microliter protein, 2 microliter reservoir solution
|
分辨率 2.25 Å
R-free 0.245
|
|
9RCY
Structure of protein kinase CK2alpha mutant R21Q associated with the Okur-Chung Neurodevelopmental Syndrome
提交 2025-05-30
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–391(391 aa)
|
突变:R21Q
|
SO4 SULFATE ION × 7
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;Reservoir: 700 microliters of 200 mM Lithium sulphate, 100 mM Bis-Tris, pH 6.5, 35 % PEG 3350
Protein concentrated to 5 mg per mL in 500 mM NaCl, 25 mM Tris-HCl, pH 8.5
Drop: 6 microliter protein mixed with 2 microliter reservoir
|
分辨率 2.35 Å
R-free 0.258
|
|
9RCY
Structure of protein kinase CK2alpha mutant R21Q associated with the Okur-Chung Neurodevelopmental Syndrome
提交 2025-05-30
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–391(391 aa)
|
突变:R21Q
|
SO4 SULFATE ION × 5
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;Reservoir: 700 microliters of 200 mM Lithium sulphate, 100 mM Bis-Tris, pH 6.5, 35 % PEG 3350
Protein concentrated to 5 mg per mL in 500 mM NaCl, 25 mM Tris-HCl, pH 8.5
Drop: 6 microliter protein mixed with 2 microliter reservoir
|
分辨率 2.35 Å
R-free 0.258
|
|
9RFN
Structure of protein kinase CK2alpha mutant E264D associated with the Okur-Chung Neurodevelopmental Syndrome
提交 2025-06-04
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
1–391(391 aa)
|
突变:E264D
|
EDO 1,2-ETHANEDIOL × 1
SO4 SULFATE ION × 7
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;Reservoir: 200 mM Li2SO4, 100 mM BIS-TRIS, HCl ph 6.5, 35 % PEG 3350
Protein: 5 mg per mL in 500 mM NaCl, 25 mM TRIS-HCl, pH 8.5
Drop: 4 microliter protein mixed with 2 microliter reservoir
|
分辨率 2.58 Å
R-free 0.280
|
|
9RFN
Structure of protein kinase CK2alpha mutant E264D associated with the Okur-Chung Neurodevelopmental Syndrome
提交 2025-06-04
|
构建体不同
突变/修饰不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 2
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 B
1–391(391 aa)
|
突变:E264D
|
SO4 SULFATE ION × 5
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;Reservoir: 200 mM Li2SO4, 100 mM BIS-TRIS, HCl ph 6.5, 35 % PEG 3350
Protein: 5 mg per mL in 500 mM NaCl, 25 mM TRIS-HCl, pH 8.5
Drop: 4 microliter protein mixed with 2 microliter reservoir
|
分辨率 2.58 Å
R-free 0.280
|
|
9TTA
Crystal Structure of S12 bound to Ck2a
提交 2026-01-06
|
构建体不同
聚集状态不同
配体/离子不同
实验环境不同
结构质量不同
|
Assembly 1
蛋白单体
单体;蛋白 × 1
PDB 声明:monomeric
|
链 A
2–329(328 aa)
|
未记录
|
A1JXM 3-[2-[4-[(3-chloranyl-4-phenyl-phenyl)methylamino]butyl-[2-oxidanylidene-2-[2-(2-prop-2-ynoxyethoxy)ethylamino]ethyl]amino]ethanoylamino]benzoic acid × 1
ACT ACETATE ION × 1
|
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;107mM Mes pH 6.5, 29% glycerol ethoxylate, 1 M ammonium acetate
|
分辨率 1.91 Å
R-free 0.284
|