6b8h

Mosaic model of yeast mitochondrial ATP synthase monomer

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

ATP synthase subunit 9, mitochondrial

OrganismNot specified

UniProt P61829

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 60 ATP synthase protein 8 × 2 (P00856) ATP synthase subunit a × 2 (P00854) ATP synthase subunit 4, mitochondrial × 2 (P05626) ATP synthase subunit d, mitochondrial × 2 (P30902) ATP synthase subunit e, mitochondrial × 2 ATP synthase subunit f, mitochondrial × 2 (Q06405) AATP synthase subunit g × 2 ATP synthase subunit J, mitochondrial × 2 (P81450) ATP synthase subunit K, mitochondrial × 2 (P81451) ATP synthase subunit alpha, mitochondrial × 6 (P07251) ATP synthase subunit beta, mitochondrial × 6 (P00830) ATP synthase subunit gamma, mitochondrial × 2 (P38077) ATP synthase subunit delta, mitochondrial × 2 (Q12165) ATP synthase catalytic sector F1 epsilon subunit × 2 (E9P9X4) ATP synthase subunit 5, mitochondrial × 2 (P09457) ATP synthase subunit h × 2 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 10 MAGNESIUM ION × 10 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATP9_YEAST
Isoform —
PDB entities 1
Chains and sequence ranges Author chain 0; PDBConstruct 1–76; UniProt 1–76 Author chain 1; PDBConstruct 1–76; UniProt 1–76 Author chain 2; PDBConstruct 1–76; UniProt 1–76 Author chain 3; PDBConstruct 1–76; UniProt 1–76 Author chain 4; PDBConstruct 1–76; UniProt 1–76 Author chain 5; PDBConstruct 1–76; UniProt 1–76 Author chain 6; PDBConstruct 1–76; UniProt 1–76 Author chain 7; PDBConstruct 1–76; UniProt 1–76 Author chain 8; PDBConstruct 1–76; UniProt 1–76 Author chain 9; PDBConstruct 1–76; UniProt 1–76 Author chain J; PDBConstruct 1–76; UniProt 1–76 Author chain L; PDBConstruct 1–76; UniProt 1–76 Author chain M; PDBConstruct 1–76; UniProt 1–76 Author chain N; PDBConstruct 1–76; UniProt 1–76 Author chain P; PDBConstruct 1–76; UniProt 1–76 Author chain Q; PDBConstruct 1–76; UniProt 1–76 Author chain R; PDBConstruct 1–76; UniProt 1–76 Author chain S; PDBConstruct 1–76; UniProt 1–76 Author chain T; PDBConstruct 1–76; UniProt 1–76 Author chain U; PDBConstruct 1–76; UniProt 1–76

ATP synthase protein 8

OrganismNot specified

UniProt P00856

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 60 ATP synthase subunit 9, mitochondrial × 20 (P61829) ATP synthase subunit a × 2 (P00854) ATP synthase subunit 4, mitochondrial × 2 (P05626) ATP synthase subunit d, mitochondrial × 2 (P30902) ATP synthase subunit e, mitochondrial × 2 ATP synthase subunit f, mitochondrial × 2 (Q06405) AATP synthase subunit g × 2 ATP synthase subunit J, mitochondrial × 2 (P81450) ATP synthase subunit K, mitochondrial × 2 (P81451) ATP synthase subunit alpha, mitochondrial × 6 (P07251) ATP synthase subunit beta, mitochondrial × 6 (P00830) ATP synthase subunit gamma, mitochondrial × 2 (P38077) ATP synthase subunit delta, mitochondrial × 2 (Q12165) ATP synthase catalytic sector F1 epsilon subunit × 2 (E9P9X4) ATP synthase subunit 5, mitochondrial × 2 (P09457) ATP synthase subunit h × 2 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 10 MAGNESIUM ION × 10 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATP8_YEAST
Isoform —
PDB entities 2
Chains and sequence ranges Author chain A; PDBConstruct 1–48; UniProt 1–48 Author chain V; PDBConstruct 1–48; UniProt 1–48

ATP synthase subunit a

OrganismNot specified

UniProt P00854

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 60 ATP synthase subunit 9, mitochondrial × 20 (P61829) ATP synthase protein 8 × 2 (P00856) ATP synthase subunit 4, mitochondrial × 2 (P05626) ATP synthase subunit d, mitochondrial × 2 (P30902) ATP synthase subunit e, mitochondrial × 2 ATP synthase subunit f, mitochondrial × 2 (Q06405) AATP synthase subunit g × 2 ATP synthase subunit J, mitochondrial × 2 (P81450) ATP synthase subunit K, mitochondrial × 2 (P81451) ATP synthase subunit alpha, mitochondrial × 6 (P07251) ATP synthase subunit beta, mitochondrial × 6 (P00830) ATP synthase subunit gamma, mitochondrial × 2 (P38077) ATP synthase subunit delta, mitochondrial × 2 (Q12165) ATP synthase catalytic sector F1 epsilon subunit × 2 (E9P9X4) ATP synthase subunit 5, mitochondrial × 2 (P09457) ATP synthase subunit h × 2 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 10 MAGNESIUM ION × 10 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATP6_YEAST
Isoform —
PDB entities 3
Chains and sequence ranges Author chain a; PDBConstruct 1–249; UniProt 11–259 Author chain p; PDBConstruct 1–249; UniProt 11–259

ATP synthase subunit 4, mitochondrial

OrganismNot specified

UniProt P05626

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 60 ATP synthase subunit 9, mitochondrial × 20 (P61829) ATP synthase protein 8 × 2 (P00856) ATP synthase subunit a × 2 (P00854) ATP synthase subunit d, mitochondrial × 2 (P30902) ATP synthase subunit e, mitochondrial × 2 ATP synthase subunit f, mitochondrial × 2 (Q06405) AATP synthase subunit g × 2 ATP synthase subunit J, mitochondrial × 2 (P81450) ATP synthase subunit K, mitochondrial × 2 (P81451) ATP synthase subunit alpha, mitochondrial × 6 (P07251) ATP synthase subunit beta, mitochondrial × 6 (P00830) ATP synthase subunit gamma, mitochondrial × 2 (P38077) ATP synthase subunit delta, mitochondrial × 2 (Q12165) ATP synthase catalytic sector F1 epsilon subunit × 2 (E9P9X4) ATP synthase subunit 5, mitochondrial × 2 (P09457) ATP synthase subunit h × 2 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 10 MAGNESIUM ION × 10 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATPF_YEAST
Isoform —
PDB entities 4
Chains and sequence ranges Author chain b; PDBConstruct 1–209; UniProt 36–244 Author chain q; PDBConstruct 1–209; UniProt 36–244

ATP synthase subunit d, mitochondrial

OrganismNot specified

UniProt P30902

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 60 ATP synthase subunit 9, mitochondrial × 20 (P61829) ATP synthase protein 8 × 2 (P00856) ATP synthase subunit a × 2 (P00854) ATP synthase subunit 4, mitochondrial × 2 (P05626) ATP synthase subunit e, mitochondrial × 2 ATP synthase subunit f, mitochondrial × 2 (Q06405) AATP synthase subunit g × 2 ATP synthase subunit J, mitochondrial × 2 (P81450) ATP synthase subunit K, mitochondrial × 2 (P81451) ATP synthase subunit alpha, mitochondrial × 6 (P07251) ATP synthase subunit beta, mitochondrial × 6 (P00830) ATP synthase subunit gamma, mitochondrial × 2 (P38077) ATP synthase subunit delta, mitochondrial × 2 (Q12165) ATP synthase catalytic sector F1 epsilon subunit × 2 (E9P9X4) ATP synthase subunit 5, mitochondrial × 2 (P09457) ATP synthase subunit h × 2 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 10 MAGNESIUM ION × 10 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATP7_YEAST
Isoform —
PDB entities 5
Chains and sequence ranges Author chain d; PDBConstruct 1–173; UniProt 2–174 Author chain r; PDBConstruct 1–173; UniProt 2–174

ATP synthase subunit f, mitochondrial

OrganismNot specified

UniProt Q06405

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 60 ATP synthase subunit 9, mitochondrial × 20 (P61829) ATP synthase protein 8 × 2 (P00856) ATP synthase subunit a × 2 (P00854) ATP synthase subunit 4, mitochondrial × 2 (P05626) ATP synthase subunit d, mitochondrial × 2 (P30902) ATP synthase subunit e, mitochondrial × 2 AATP synthase subunit g × 2 ATP synthase subunit J, mitochondrial × 2 (P81450) ATP synthase subunit K, mitochondrial × 2 (P81451) ATP synthase subunit alpha, mitochondrial × 6 (P07251) ATP synthase subunit beta, mitochondrial × 6 (P00830) ATP synthase subunit gamma, mitochondrial × 2 (P38077) ATP synthase subunit delta, mitochondrial × 2 (Q12165) ATP synthase catalytic sector F1 epsilon subunit × 2 (E9P9X4) ATP synthase subunit 5, mitochondrial × 2 (P09457) ATP synthase subunit h × 2 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 10 MAGNESIUM ION × 10 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATPK_YEAST
Isoform —
PDB entities 7
Chains and sequence ranges Author chain f; PDBConstruct 1–95; UniProt 7–101 Author chain t; PDBConstruct 1–95; UniProt 7–101

ATP synthase subunit J, mitochondrial

OrganismNot specified

UniProt P81450

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 60 ATP synthase subunit 9, mitochondrial × 20 (P61829) ATP synthase protein 8 × 2 (P00856) ATP synthase subunit a × 2 (P00854) ATP synthase subunit 4, mitochondrial × 2 (P05626) ATP synthase subunit d, mitochondrial × 2 (P30902) ATP synthase subunit e, mitochondrial × 2 ATP synthase subunit f, mitochondrial × 2 (Q06405) AATP synthase subunit g × 2 ATP synthase subunit K, mitochondrial × 2 (P81451) ATP synthase subunit alpha, mitochondrial × 6 (P07251) ATP synthase subunit beta, mitochondrial × 6 (P00830) ATP synthase subunit gamma, mitochondrial × 2 (P38077) ATP synthase subunit delta, mitochondrial × 2 (Q12165) ATP synthase catalytic sector F1 epsilon subunit × 2 (E9P9X4) ATP synthase subunit 5, mitochondrial × 2 (P09457) ATP synthase subunit h × 2 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 10 MAGNESIUM ION × 10 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATP18_YEAST
Isoform —
PDB entities 9
Chains and sequence ranges Author chain i; PDBConstruct 1–59; UniProt 1–59 Author chain w; PDBConstruct 1–59; UniProt 1–59

ATP synthase subunit K, mitochondrial

OrganismNot specified

UniProt P81451

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 60 ATP synthase subunit 9, mitochondrial × 20 (P61829) ATP synthase protein 8 × 2 (P00856) ATP synthase subunit a × 2 (P00854) ATP synthase subunit 4, mitochondrial × 2 (P05626) ATP synthase subunit d, mitochondrial × 2 (P30902) ATP synthase subunit e, mitochondrial × 2 ATP synthase subunit f, mitochondrial × 2 (Q06405) AATP synthase subunit g × 2 ATP synthase subunit J, mitochondrial × 2 (P81450) ATP synthase subunit alpha, mitochondrial × 6 (P07251) ATP synthase subunit beta, mitochondrial × 6 (P00830) ATP synthase subunit gamma, mitochondrial × 2 (P38077) ATP synthase subunit delta, mitochondrial × 2 (Q12165) ATP synthase catalytic sector F1 epsilon subunit × 2 (E9P9X4) ATP synthase subunit 5, mitochondrial × 2 (P09457) ATP synthase subunit h × 2 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 10 MAGNESIUM ION × 10 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATP19_YEAST
Isoform —
PDB entities 10
Chains and sequence ranges Author chain k; PDBConstruct 1–68; UniProt 1–68 Author chain x; PDBConstruct 1–68; UniProt 1–68

ATP synthase subunit alpha, mitochondrial

OrganismNot specified

UniProt P07251

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 60 ATP synthase subunit 9, mitochondrial × 20 (P61829) ATP synthase protein 8 × 2 (P00856) ATP synthase subunit a × 2 (P00854) ATP synthase subunit 4, mitochondrial × 2 (P05626) ATP synthase subunit d, mitochondrial × 2 (P30902) ATP synthase subunit e, mitochondrial × 2 ATP synthase subunit f, mitochondrial × 2 (Q06405) AATP synthase subunit g × 2 ATP synthase subunit J, mitochondrial × 2 (P81450) ATP synthase subunit K, mitochondrial × 2 (P81451) ATP synthase subunit beta, mitochondrial × 6 (P00830) ATP synthase subunit gamma, mitochondrial × 2 (P38077) ATP synthase subunit delta, mitochondrial × 2 (Q12165) ATP synthase catalytic sector F1 epsilon subunit × 2 (E9P9X4) ATP synthase subunit 5, mitochondrial × 2 (P09457) ATP synthase subunit h × 2 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 10 MAGNESIUM ION × 10 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATPA_YEAST
Isoform —
PDB entities 11
Chains and sequence ranges Author chain B; PDBConstruct 1–510; UniProt 36–545 Author chain C; PDBConstruct 1–510; UniProt 36–545 Author chain K; PDBConstruct 1–510; UniProt 36–545 Author chain W; PDBConstruct 1–510; UniProt 36–545 Author chain X; PDBConstruct 1–510; UniProt 36–545 Author chain n; PDBConstruct 1–510; UniProt 36–545

ATP synthase subunit beta, mitochondrial

OrganismNot specified

UniProt P00830

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 60 ATP synthase subunit 9, mitochondrial × 20 (P61829) ATP synthase protein 8 × 2 (P00856) ATP synthase subunit a × 2 (P00854) ATP synthase subunit 4, mitochondrial × 2 (P05626) ATP synthase subunit d, mitochondrial × 2 (P30902) ATP synthase subunit e, mitochondrial × 2 ATP synthase subunit f, mitochondrial × 2 (Q06405) AATP synthase subunit g × 2 ATP synthase subunit J, mitochondrial × 2 (P81450) ATP synthase subunit K, mitochondrial × 2 (P81451) ATP synthase subunit alpha, mitochondrial × 6 (P07251) ATP synthase subunit gamma, mitochondrial × 2 (P38077) ATP synthase subunit delta, mitochondrial × 2 (Q12165) ATP synthase catalytic sector F1 epsilon subunit × 2 (E9P9X4) ATP synthase subunit 5, mitochondrial × 2 (P09457) ATP synthase subunit h × 2 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 10 MAGNESIUM ION × 10 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATPB_YEAST
Isoform —
PDB entities 12
Chains and sequence ranges Author chain D; PDBConstruct 1–478; UniProt 34–511 Author chain E; PDBConstruct 1–478; UniProt 34–511 Author chain F; PDBConstruct 1–478; UniProt 34–511 Author chain Y; PDBConstruct 1–478; UniProt 34–511 Author chain Z; PDBConstruct 1–478; UniProt 34–511 Author chain c; PDBConstruct 1–478; UniProt 34–511

ATP synthase subunit gamma, mitochondrial

OrganismNot specified

UniProt P38077

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 60 ATP synthase subunit 9, mitochondrial × 20 (P61829) ATP synthase protein 8 × 2 (P00856) ATP synthase subunit a × 2 (P00854) ATP synthase subunit 4, mitochondrial × 2 (P05626) ATP synthase subunit d, mitochondrial × 2 (P30902) ATP synthase subunit e, mitochondrial × 2 ATP synthase subunit f, mitochondrial × 2 (Q06405) AATP synthase subunit g × 2 ATP synthase subunit J, mitochondrial × 2 (P81450) ATP synthase subunit K, mitochondrial × 2 (P81451) ATP synthase subunit alpha, mitochondrial × 6 (P07251) ATP synthase subunit beta, mitochondrial × 6 (P00830) ATP synthase subunit delta, mitochondrial × 2 (Q12165) ATP synthase catalytic sector F1 epsilon subunit × 2 (E9P9X4) ATP synthase subunit 5, mitochondrial × 2 (P09457) ATP synthase subunit h × 2 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 10 MAGNESIUM ION × 10 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATPG_YEAST
Isoform —
PDB entities 13
Chains and sequence ranges Author chain G; PDBConstruct 1–278; UniProt 34–311 Author chain j; PDBConstruct 1–278; UniProt 34–311

ATP synthase subunit delta, mitochondrial

OrganismNot specified

UniProt Q12165

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 60 ATP synthase subunit 9, mitochondrial × 20 (P61829) ATP synthase protein 8 × 2 (P00856) ATP synthase subunit a × 2 (P00854) ATP synthase subunit 4, mitochondrial × 2 (P05626) ATP synthase subunit d, mitochondrial × 2 (P30902) ATP synthase subunit e, mitochondrial × 2 ATP synthase subunit f, mitochondrial × 2 (Q06405) AATP synthase subunit g × 2 ATP synthase subunit J, mitochondrial × 2 (P81450) ATP synthase subunit K, mitochondrial × 2 (P81451) ATP synthase subunit alpha, mitochondrial × 6 (P07251) ATP synthase subunit beta, mitochondrial × 6 (P00830) ATP synthase subunit gamma, mitochondrial × 2 (P38077) ATP synthase catalytic sector F1 epsilon subunit × 2 (E9P9X4) ATP synthase subunit 5, mitochondrial × 2 (P09457) ATP synthase subunit h × 2 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 10 MAGNESIUM ION × 10 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATPD_YEAST
Isoform —
PDB entities 14
Chains and sequence ranges Author chain H; PDBConstruct 1–138; UniProt 23–160 Author chain l; PDBConstruct 1–138; UniProt 23–160

ATP synthase catalytic sector F1 epsilon subunit

OrganismNot specified

UniProt E9P9X4

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 60 ATP synthase subunit 9, mitochondrial × 20 (P61829) ATP synthase protein 8 × 2 (P00856) ATP synthase subunit a × 2 (P00854) ATP synthase subunit 4, mitochondrial × 2 (P05626) ATP synthase subunit d, mitochondrial × 2 (P30902) ATP synthase subunit e, mitochondrial × 2 ATP synthase subunit f, mitochondrial × 2 (Q06405) AATP synthase subunit g × 2 ATP synthase subunit J, mitochondrial × 2 (P81450) ATP synthase subunit K, mitochondrial × 2 (P81451) ATP synthase subunit alpha, mitochondrial × 6 (P07251) ATP synthase subunit beta, mitochondrial × 6 (P00830) ATP synthase subunit gamma, mitochondrial × 2 (P38077) ATP synthase subunit delta, mitochondrial × 2 (Q12165) ATP synthase subunit 5, mitochondrial × 2 (P09457) ATP synthase subunit h × 2 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 10 MAGNESIUM ION × 10 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name E9P9X4_YEASX
Isoform —
PDB entities 15
Chains and sequence ranges Author chain I; PDBConstruct 1–61; UniProt 2–62 Author chain m; PDBConstruct 1–61; UniProt 2–62

ATP synthase subunit 5, mitochondrial

OrganismNot specified

UniProt P09457

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 60 ATP synthase subunit 9, mitochondrial × 20 (P61829) ATP synthase protein 8 × 2 (P00856) ATP synthase subunit a × 2 (P00854) ATP synthase subunit 4, mitochondrial × 2 (P05626) ATP synthase subunit d, mitochondrial × 2 (P30902) ATP synthase subunit e, mitochondrial × 2 ATP synthase subunit f, mitochondrial × 2 (Q06405) AATP synthase subunit g × 2 ATP synthase subunit J, mitochondrial × 2 (P81450) ATP synthase subunit K, mitochondrial × 2 (P81451) ATP synthase subunit alpha, mitochondrial × 6 (P07251) ATP synthase subunit beta, mitochondrial × 6 (P00830) ATP synthase subunit gamma, mitochondrial × 2 (P38077) ATP synthase subunit delta, mitochondrial × 2 (Q12165) ATP synthase catalytic sector F1 epsilon subunit × 2 (E9P9X4) ATP synthase subunit h × 2 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 10 MAGNESIUM ION × 10 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATPO_YEAST
Isoform —
PDB entities 16
Chains and sequence ranges Author chain O; PDBConstruct 1–195; UniProt 18–212 Author chain o; PDBConstruct 1–195; UniProt 18–212

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id6b8h
Deposition date deposition_date2017-10-07
Structure title titleMosaic model of yeast mitochondrial ATP synthase monomer
Keywords keywordsComplex, Proton transporter, MEMBRANE PROTEIN; MEMBRANE PROTEIN
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

6b8h__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

6b8h__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 1010 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

6b8h__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)0.00 Å
Rg (electron density)126.60 Å
Total Rg126.50 Å
Atom count75614
Residues10470
Excluded volume1352000 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 6b8h__assembly_1__model_1 60-meric (60) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (19)

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6. Fold Classification (SCOP + CATH) 64 domains

CATH v4.4 (64 domains)

Domain ID domain_id6b8h000
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology20 — F1FO ATP Synthase
Homologous superfamily homologous superfamily10 — F1F0 ATP synthase subunit C
Domain ID domain_id6b8h100
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology20 — F1FO ATP Synthase
Homologous superfamily homologous superfamily10 — F1F0 ATP synthase subunit C
Domain ID domain_id6b8h200
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology20 — F1FO ATP Synthase
Homologous superfamily homologous superfamily10 — F1F0 ATP synthase subunit C
Domain ID domain_id6b8h300
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology20 — F1FO ATP Synthase
Homologous superfamily homologous superfamily10 — F1F0 ATP synthase subunit C
Domain ID domain_id6b8h400
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology20 — F1FO ATP Synthase
Homologous superfamily homologous superfamily10 — F1F0 ATP synthase subunit C
Domain ID domain_id6b8h500
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology20 — F1FO ATP Synthase
Homologous superfamily homologous superfamily10 — F1F0 ATP synthase subunit C
Domain ID domain_id6b8h600
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology20 — F1FO ATP Synthase
Homologous superfamily homologous superfamily10 — F1F0 ATP synthase subunit C
Domain ID domain_id6b8h700
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology20 — F1FO ATP Synthase
Homologous superfamily homologous superfamily10 — F1F0 ATP synthase subunit C
Domain ID domain_id6b8h800
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology20 — F1FO ATP Synthase
Homologous superfamily homologous superfamily10 — F1F0 ATP synthase subunit C
Domain ID domain_id6b8h900
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology20 — F1FO ATP Synthase
Homologous superfamily homologous superfamily10 — F1F0 ATP synthase subunit C
Domain ID domain_id6b8hB01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology30 — Elongation Factor Tu (Ef-tu); domain 3
Homologous superfamily homologous superfamily20 —
Domain ID domain_id6b8hB02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id6b8hB03
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology150 — Lysin
Homologous superfamily homologous superfamily20 — ATP synthase alpha/beta chain, C-terminal domain
Domain ID domain_id6b8hC01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology30 — Elongation Factor Tu (Ef-tu); domain 3
Homologous superfamily homologous superfamily20 —
Domain ID domain_id6b8hC02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id6b8hC03
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology150 — Lysin
Homologous superfamily homologous superfamily20 — ATP synthase alpha/beta chain, C-terminal domain
Domain ID domain_id6b8hD01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology10 — Thrombin, subunit H
Homologous superfamily homologous superfamily170 —
Domain ID domain_id6b8hD02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id6b8hD03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology1140 — Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3
Homologous superfamily homologous superfamily10 — Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
Domain ID domain_id6b8hE01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology10 — Thrombin, subunit H
Homologous superfamily homologous superfamily170 —
Domain ID domain_id6b8hE02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id6b8hE03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology1140 — Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3
Homologous superfamily homologous superfamily10 — Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
Domain ID domain_id6b8hF01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology10 — Thrombin, subunit H
Homologous superfamily homologous superfamily170 —
Domain ID domain_id6b8hF02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id6b8hF03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology1140 — Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3
Homologous superfamily homologous superfamily10 — Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
Domain ID domain_id6b8hG01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology287 — Helix Hairpins
Homologous superfamily homologous superfamily80 — ATP synthase, gamma subunit, helix hairpin domain
Domain ID domain_id6b8hG02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology1380 — Pyruvate Kinase; Chain: A, domain 1
Homologous superfamily homologous superfamily10 — ATP synthase, F1 complex, gamma subunit
Domain ID domain_id6b8hI00
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology1620 — Atp Synthase Epsilon Chain; Chain: I;
Homologous superfamily homologous superfamily20 — ATP synthase, F1 complex, epsilon subunit superfamily, mitochondrial
Domain ID domain_id6b8hJ00
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology20 — F1FO ATP Synthase
Homologous superfamily homologous superfamily10 — F1F0 ATP synthase subunit C
Domain ID domain_id6b8hK01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology30 — Elongation Factor Tu (Ef-tu); domain 3
Homologous superfamily homologous superfamily20 —
Domain ID domain_id6b8hK02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id6b8hK03
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology150 — Lysin
Homologous superfamily homologous superfamily20 — ATP synthase alpha/beta chain, C-terminal domain
Domain ID domain_id6b8hL00
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology20 — F1FO ATP Synthase
Homologous superfamily homologous superfamily10 — F1F0 ATP synthase subunit C
Domain ID domain_id6b8hM00
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology20 — F1FO ATP Synthase
Homologous superfamily homologous superfamily10 — F1F0 ATP synthase subunit C
Domain ID domain_id6b8hN00
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology20 — F1FO ATP Synthase
Homologous superfamily homologous superfamily10 — F1F0 ATP synthase subunit C
Domain ID domain_id6b8hO01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology520 — Peroxidase; domain 1
Homologous superfamily homologous superfamily20 — N-terminal domain of the delta subunit of the F1F0-ATP synthase
Domain ID domain_id6b8hP00
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology20 — F1FO ATP Synthase
Homologous superfamily homologous superfamily10 — F1F0 ATP synthase subunit C
Domain ID domain_id6b8hQ00
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology20 — F1FO ATP Synthase
Homologous superfamily homologous superfamily10 — F1F0 ATP synthase subunit C
Domain ID domain_id6b8hR00
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology20 — F1FO ATP Synthase
Homologous superfamily homologous superfamily10 — F1F0 ATP synthase subunit C
Domain ID domain_id6b8hS00
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology20 — F1FO ATP Synthase
Homologous superfamily homologous superfamily10 — F1F0 ATP synthase subunit C
Domain ID domain_id6b8hT00
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology20 — F1FO ATP Synthase
Homologous superfamily homologous superfamily10 — F1F0 ATP synthase subunit C
Domain ID domain_id6b8hU00
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology20 — F1FO ATP Synthase
Homologous superfamily homologous superfamily10 — F1F0 ATP synthase subunit C
Domain ID domain_id6b8hW01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology30 — Elongation Factor Tu (Ef-tu); domain 3
Homologous superfamily homologous superfamily20 —
Domain ID domain_id6b8hW02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id6b8hW03
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology150 — Lysin
Homologous superfamily homologous superfamily20 — ATP synthase alpha/beta chain, C-terminal domain
Domain ID domain_id6b8hX01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology30 — Elongation Factor Tu (Ef-tu); domain 3
Homologous superfamily homologous superfamily20 —
Domain ID domain_id6b8hX02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id6b8hX03
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology150 — Lysin
Homologous superfamily homologous superfamily20 — ATP synthase alpha/beta chain, C-terminal domain
Domain ID domain_id6b8hY01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology10 — Thrombin, subunit H
Homologous superfamily homologous superfamily170 —
Domain ID domain_id6b8hY02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id6b8hY03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology1140 — Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3
Homologous superfamily homologous superfamily10 — Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
Domain ID domain_id6b8hZ01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology10 — Thrombin, subunit H
Homologous superfamily homologous superfamily170 —
Domain ID domain_id6b8hZ02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id6b8hZ03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology1140 — Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3
Homologous superfamily homologous superfamily10 — Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
Domain ID domain_id6b8hc01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology10 — Thrombin, subunit H
Homologous superfamily homologous superfamily170 —
Domain ID domain_id6b8hc02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id6b8hc03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology1140 — Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3
Homologous superfamily homologous superfamily10 — Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
Domain ID domain_id6b8hj01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology287 — Helix Hairpins
Homologous superfamily homologous superfamily80 — ATP synthase, gamma subunit, helix hairpin domain
Domain ID domain_id6b8hj02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology1380 — Pyruvate Kinase; Chain: A, domain 1
Homologous superfamily homologous superfamily10 — ATP synthase, F1 complex, gamma subunit
Domain ID domain_id6b8hm00
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology1620 — Atp Synthase Epsilon Chain; Chain: I;
Homologous superfamily homologous superfamily20 — ATP synthase, F1 complex, epsilon subunit superfamily, mitochondrial
Domain ID domain_id6b8hn01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology30 — Elongation Factor Tu (Ef-tu); domain 3
Homologous superfamily homologous superfamily20 —
Domain ID domain_id6b8hn02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id6b8hn03
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology150 — Lysin
Homologous superfamily homologous superfamily20 — ATP synthase alpha/beta chain, C-terminal domain
Domain ID domain_id6b8ho01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology520 — Peroxidase; domain 1
Homologous superfamily homologous superfamily20 — N-terminal domain of the delta subunit of the F1F0-ATP synthase
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7. Citations (1)