7tjz

Yeast ATP synthase State 1catalytic(b) without exogenous ATP backbone model

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

ATP synthase subunit 9

OrganismNot specified

UniProt A0A0G3F489

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 27 ATP synthase subunit alpha × 3 (P07251) ATP synthase subunit beta × 3 (P00830) ATP synthase subunit gamma × 1 (P38077) ATP synthase subunit delta × 1 (Q12165) ATP synthase subunit epsilon × 1 (P21306) ATP synthase subunit 5 × 1 (P09457) ATP synthase subunit a × 1 (P00854) ATP synthase subunit 4 × 1 (P05626) ATP synthase subunit d × 1 (P30902) ATP synthase subunit f × 1 (Q06405) ATP synthase subunit H × 1 (Q12349) ATP synthase subunit J × 1 (P81450) ATP synthase protein 8 × 1 (P00856) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A0G3F489_YEASX
Isoform —
PDB entities 1
Chains and sequence ranges Author chain 0; PDBConstruct 1–76; UniProt 1–76 Author chain 1; PDBConstruct 1–76; UniProt 1–76 Author chain 2; PDBConstruct 1–76; UniProt 1–76 Author chain 3; PDBConstruct 1–76; UniProt 1–76 Author chain 4; PDBConstruct 1–76; UniProt 1–76 Author chain 5; PDBConstruct 1–76; UniProt 1–76 Author chain 6; PDBConstruct 1–76; UniProt 1–76 Author chain 7; PDBConstruct 1–76; UniProt 1–76 Author chain 8; PDBConstruct 1–76; UniProt 1–76 Author chain 9; PDBConstruct 1–76; UniProt 1–76

ATP synthase subunit alpha

OrganismNot specified

UniProt P07251

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 27 ATP synthase subunit 9 × 10 (A0A0G3F489) ATP synthase subunit beta × 3 (P00830) ATP synthase subunit gamma × 1 (P38077) ATP synthase subunit delta × 1 (Q12165) ATP synthase subunit epsilon × 1 (P21306) ATP synthase subunit 5 × 1 (P09457) ATP synthase subunit a × 1 (P00854) ATP synthase subunit 4 × 1 (P05626) ATP synthase subunit d × 1 (P30902) ATP synthase subunit f × 1 (Q06405) ATP synthase subunit H × 1 (Q12349) ATP synthase subunit J × 1 (P81450) ATP synthase protein 8 × 1 (P00856) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATPA_YEAST
Isoform —
PDB entities 2
Chains and sequence ranges Author chain A; PDBConstruct 1–510; UniProt 36–545 Author chain B; PDBConstruct 1–510; UniProt 36–545 Author chain C; PDBConstruct 1–510; UniProt 36–545

ATP synthase subunit beta

OrganismNot specified

UniProt P00830

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 27 ATP synthase subunit 9 × 10 (A0A0G3F489) ATP synthase subunit alpha × 3 (P07251) ATP synthase subunit gamma × 1 (P38077) ATP synthase subunit delta × 1 (Q12165) ATP synthase subunit epsilon × 1 (P21306) ATP synthase subunit 5 × 1 (P09457) ATP synthase subunit a × 1 (P00854) ATP synthase subunit 4 × 1 (P05626) ATP synthase subunit d × 1 (P30902) ATP synthase subunit f × 1 (Q06405) ATP synthase subunit H × 1 (Q12349) ATP synthase subunit J × 1 (P81450) ATP synthase protein 8 × 1 (P00856) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATPB_YEAST
Isoform —
PDB entities 3
Chains and sequence ranges Author chain D; PDBConstruct 1–478; UniProt 34–511 Author chain E; PDBConstruct 1–478; UniProt 34–511 Author chain F; PDBConstruct 1–478; UniProt 34–511

ATP synthase subunit gamma

OrganismNot specified

UniProt P38077

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 27 ATP synthase subunit 9 × 10 (A0A0G3F489) ATP synthase subunit alpha × 3 (P07251) ATP synthase subunit beta × 3 (P00830) ATP synthase subunit delta × 1 (Q12165) ATP synthase subunit epsilon × 1 (P21306) ATP synthase subunit 5 × 1 (P09457) ATP synthase subunit a × 1 (P00854) ATP synthase subunit 4 × 1 (P05626) ATP synthase subunit d × 1 (P30902) ATP synthase subunit f × 1 (Q06405) ATP synthase subunit H × 1 (Q12349) ATP synthase subunit J × 1 (P81450) ATP synthase protein 8 × 1 (P00856) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATPG_YEAST
Isoform —
PDB entities 4
Chains and sequence ranges Author chain G; PDBConstruct 1–278; UniProt 34–311

ATP synthase subunit delta

OrganismNot specified

UniProt Q12165

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 27 ATP synthase subunit 9 × 10 (A0A0G3F489) ATP synthase subunit alpha × 3 (P07251) ATP synthase subunit beta × 3 (P00830) ATP synthase subunit gamma × 1 (P38077) ATP synthase subunit epsilon × 1 (P21306) ATP synthase subunit 5 × 1 (P09457) ATP synthase subunit a × 1 (P00854) ATP synthase subunit 4 × 1 (P05626) ATP synthase subunit d × 1 (P30902) ATP synthase subunit f × 1 (Q06405) ATP synthase subunit H × 1 (Q12349) ATP synthase subunit J × 1 (P81450) ATP synthase protein 8 × 1 (P00856) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATPD_YEAST
Isoform —
PDB entities 5
Chains and sequence ranges Author chain H; PDBConstruct 1–138; UniProt 23–160

ATP synthase subunit epsilon

OrganismNot specified

UniProt P21306

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 27 ATP synthase subunit 9 × 10 (A0A0G3F489) ATP synthase subunit alpha × 3 (P07251) ATP synthase subunit beta × 3 (P00830) ATP synthase subunit gamma × 1 (P38077) ATP synthase subunit delta × 1 (Q12165) ATP synthase subunit 5 × 1 (P09457) ATP synthase subunit a × 1 (P00854) ATP synthase subunit 4 × 1 (P05626) ATP synthase subunit d × 1 (P30902) ATP synthase subunit f × 1 (Q06405) ATP synthase subunit H × 1 (Q12349) ATP synthase subunit J × 1 (P81450) ATP synthase protein 8 × 1 (P00856) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATP5E_YEAST
Isoform —
PDB entities 6
Chains and sequence ranges Author chain I; PDBConstruct 1–61; UniProt 2–62

ATP synthase subunit 5

OrganismNot specified

UniProt P09457

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 27 ATP synthase subunit 9 × 10 (A0A0G3F489) ATP synthase subunit alpha × 3 (P07251) ATP synthase subunit beta × 3 (P00830) ATP synthase subunit gamma × 1 (P38077) ATP synthase subunit delta × 1 (Q12165) ATP synthase subunit epsilon × 1 (P21306) ATP synthase subunit a × 1 (P00854) ATP synthase subunit 4 × 1 (P05626) ATP synthase subunit d × 1 (P30902) ATP synthase subunit f × 1 (Q06405) ATP synthase subunit H × 1 (Q12349) ATP synthase subunit J × 1 (P81450) ATP synthase protein 8 × 1 (P00856) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATPO_YEAST
Isoform —
PDB entities 7
Chains and sequence ranges Author chain O; PDBConstruct 1–195; UniProt 18–212

ATP synthase subunit a

OrganismNot specified

UniProt P00854

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 27 ATP synthase subunit 9 × 10 (A0A0G3F489) ATP synthase subunit alpha × 3 (P07251) ATP synthase subunit beta × 3 (P00830) ATP synthase subunit gamma × 1 (P38077) ATP synthase subunit delta × 1 (Q12165) ATP synthase subunit epsilon × 1 (P21306) ATP synthase subunit 5 × 1 (P09457) ATP synthase subunit 4 × 1 (P05626) ATP synthase subunit d × 1 (P30902) ATP synthase subunit f × 1 (Q06405) ATP synthase subunit H × 1 (Q12349) ATP synthase subunit J × 1 (P81450) ATP synthase protein 8 × 1 (P00856) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATP6_YEAST
Isoform —
PDB entities 8
Chains and sequence ranges Author chain T; PDBConstruct 1–249; UniProt 11–259

ATP synthase subunit 4

OrganismNot specified

UniProt P05626

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 27 ATP synthase subunit 9 × 10 (A0A0G3F489) ATP synthase subunit alpha × 3 (P07251) ATP synthase subunit beta × 3 (P00830) ATP synthase subunit gamma × 1 (P38077) ATP synthase subunit delta × 1 (Q12165) ATP synthase subunit epsilon × 1 (P21306) ATP synthase subunit 5 × 1 (P09457) ATP synthase subunit a × 1 (P00854) ATP synthase subunit d × 1 (P30902) ATP synthase subunit f × 1 (Q06405) ATP synthase subunit H × 1 (Q12349) ATP synthase subunit J × 1 (P81450) ATP synthase protein 8 × 1 (P00856) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATPF_YEAST
Isoform —
PDB entities 9
Chains and sequence ranges Author chain U; PDBConstruct 1–209; UniProt 36–244

ATP synthase subunit d

OrganismNot specified

UniProt P30902

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 27 ATP synthase subunit 9 × 10 (A0A0G3F489) ATP synthase subunit alpha × 3 (P07251) ATP synthase subunit beta × 3 (P00830) ATP synthase subunit gamma × 1 (P38077) ATP synthase subunit delta × 1 (Q12165) ATP synthase subunit epsilon × 1 (P21306) ATP synthase subunit 5 × 1 (P09457) ATP synthase subunit a × 1 (P00854) ATP synthase subunit 4 × 1 (P05626) ATP synthase subunit f × 1 (Q06405) ATP synthase subunit H × 1 (Q12349) ATP synthase subunit J × 1 (P81450) ATP synthase protein 8 × 1 (P00856) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATP7_YEAST
Isoform —
PDB entities 10
Chains and sequence ranges Author chain V; PDBConstruct 1–173; UniProt 2–174

ATP synthase subunit f

OrganismNot specified

UniProt Q06405

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 27 ATP synthase subunit 9 × 10 (A0A0G3F489) ATP synthase subunit alpha × 3 (P07251) ATP synthase subunit beta × 3 (P00830) ATP synthase subunit gamma × 1 (P38077) ATP synthase subunit delta × 1 (Q12165) ATP synthase subunit epsilon × 1 (P21306) ATP synthase subunit 5 × 1 (P09457) ATP synthase subunit a × 1 (P00854) ATP synthase subunit 4 × 1 (P05626) ATP synthase subunit d × 1 (P30902) ATP synthase subunit H × 1 (Q12349) ATP synthase subunit J × 1 (P81450) ATP synthase protein 8 × 1 (P00856) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATPK_YEAST
Isoform —
PDB entities 11
Chains and sequence ranges Author chain W; PDBConstruct 1–95; UniProt 7–101

ATP synthase subunit H

OrganismNot specified

UniProt Q12349

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 27 ATP synthase subunit 9 × 10 (A0A0G3F489) ATP synthase subunit alpha × 3 (P07251) ATP synthase subunit beta × 3 (P00830) ATP synthase subunit gamma × 1 (P38077) ATP synthase subunit delta × 1 (Q12165) ATP synthase subunit epsilon × 1 (P21306) ATP synthase subunit 5 × 1 (P09457) ATP synthase subunit a × 1 (P00854) ATP synthase subunit 4 × 1 (P05626) ATP synthase subunit d × 1 (P30902) ATP synthase subunit f × 1 (Q06405) ATP synthase subunit J × 1 (P81450) ATP synthase protein 8 × 1 (P00856) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATP14_YEAST
Isoform —
PDB entities 12
Chains and sequence ranges Author chain X; PDBConstruct 1–92; UniProt 33–124

ATP synthase subunit J

OrganismNot specified

UniProt P81450

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 27 ATP synthase subunit 9 × 10 (A0A0G3F489) ATP synthase subunit alpha × 3 (P07251) ATP synthase subunit beta × 3 (P00830) ATP synthase subunit gamma × 1 (P38077) ATP synthase subunit delta × 1 (Q12165) ATP synthase subunit epsilon × 1 (P21306) ATP synthase subunit 5 × 1 (P09457) ATP synthase subunit a × 1 (P00854) ATP synthase subunit 4 × 1 (P05626) ATP synthase subunit d × 1 (P30902) ATP synthase subunit f × 1 (Q06405) ATP synthase subunit H × 1 (Q12349) ATP synthase protein 8 × 1 (P00856) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATP18_YEAST
Isoform —
PDB entities 13
Chains and sequence ranges Author chain Y; PDBConstruct 1–59; UniProt 1–59

ATP synthase protein 8

OrganismNot specified

UniProt P00856

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 27 ATP synthase subunit 9 × 10 (A0A0G3F489) ATP synthase subunit alpha × 3 (P07251) ATP synthase subunit beta × 3 (P00830) ATP synthase subunit gamma × 1 (P38077) ATP synthase subunit delta × 1 (Q12165) ATP synthase subunit epsilon × 1 (P21306) ATP synthase subunit 5 × 1 (P09457) ATP synthase subunit a × 1 (P00854) ATP synthase subunit 4 × 1 (P05626) ATP synthase subunit d × 1 (P30902) ATP synthase subunit f × 1 (Q06405) ATP synthase subunit H × 1 (Q12349) ATP synthase subunit J × 1 (P81450) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATP8_YEAST
Isoform —
PDB entities 14
Chains and sequence ranges Author chain Z; PDBConstruct 1–48; UniProt 1–48

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id7tjz
Deposition date deposition_date2022-01-17
Structure title titleYeast ATP synthase State 1catalytic(b) without exogenous ATP backbone model
Keywords keywordsF1-ATPase, ATP Synthase, Hydrolase, Nanomotor, Complex; HYDROLASE
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

7tjz__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

7tjz__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

7tjz__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)64.75 Å
Rg (electron density)65.49 Å
Total Rg65.44 Å
Atom count20228
Residues5056
Excluded volume279440 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 7tjz__assembly_1__model_1 27-meric (27) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (14)

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7. Citations (2)