6ruo

RNA Polymerase I Open Complex conformation 1

Method: ELECTRON MICROSCOPY Dmax: 228.0 Å Quality: GOOD

1. 蛋白身份与相关结构 Protein Identity & Related Structures

RNA polymerase I-specific transcription initiation factor RRN7

Saccharomyces cerevisiae

UniProt P40992

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 蛋白–DNA 异源复合物 蛋白 × 18 DNA 2 PDB 声明:eicosameric(20) 与全部聚合物数一致 链 Q; UniProt 1–514 未记录 DNA-directed RNA polymerase I subunit RPA49 × 1 (Q01080) DNA-directed RNA polymerase I subunit RPA190 × 1 (P10964) DNA-directed RNA polymerase I subunit RPA135 × 1 (P22138) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (P07703) DNA-directed RNA polymerase I subunit RPA14 × 1 (P50106) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase I subunit RPA43 × 1 (P46669) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase I subunit RPA12 × 1 (P32529) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P28000) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) DNA-directed RNA polymerase I subunit RPA34 × 1 (P47006) RNA polymerase I-specific transcription initiation factor RRN3 × 1 (P36070) RNA polymerase I-specific transcription initiation factor RRN6 × 1 (P32786) RNA polymerase I-specific transcription initiation factor RRN11 × 1 (Q04712) Template strand × 1 Nontemplate strand × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.5 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 3.50 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 16 个其他 PDB 条目、21 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 RRN7_YEAST
Isoform
PDB实体 1
链与序列区间 作者链 Q; PDB构建体 1–514; UniProt 1–514

DNA-directed RNA polymerase I subunit RPA49

Saccharomyces cerevisiae

UniProt Q01080

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 蛋白–DNA 异源复合物 蛋白 × 18 DNA 2 PDB 声明:eicosameric(20) 与全部聚合物数一致 链 M; UniProt 1–415 未记录 RNA polymerase I-specific transcription initiation factor RRN7 × 1 (P40992) DNA-directed RNA polymerase I subunit RPA190 × 1 (P10964) DNA-directed RNA polymerase I subunit RPA135 × 1 (P22138) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (P07703) DNA-directed RNA polymerase I subunit RPA14 × 1 (P50106) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase I subunit RPA43 × 1 (P46669) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase I subunit RPA12 × 1 (P32529) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P28000) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) DNA-directed RNA polymerase I subunit RPA34 × 1 (P47006) RNA polymerase I-specific transcription initiation factor RRN3 × 1 (P36070) RNA polymerase I-specific transcription initiation factor RRN6 × 1 (P32786) RNA polymerase I-specific transcription initiation factor RRN11 × 1 (Q04712) Template strand × 1 Nontemplate strand × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.5 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 3.50 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 40 个其他 PDB 条目、51 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 RPA49_YEAST
Isoform
PDB实体 2
链与序列区间 作者链 M; PDB构建体 1–415; UniProt 1–415

DNA-directed RNA polymerase I subunit RPA190

Saccharomyces cerevisiae

UniProt P10964

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 蛋白–DNA 异源复合物 蛋白 × 18 DNA 2 PDB 声明:eicosameric(20) 与全部聚合物数一致 链 A; UniProt 1–1664 未记录 RNA polymerase I-specific transcription initiation factor RRN7 × 1 (P40992) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q01080) DNA-directed RNA polymerase I subunit RPA135 × 1 (P22138) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (P07703) DNA-directed RNA polymerase I subunit RPA14 × 1 (P50106) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase I subunit RPA43 × 1 (P46669) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase I subunit RPA12 × 1 (P32529) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P28000) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) DNA-directed RNA polymerase I subunit RPA34 × 1 (P47006) RNA polymerase I-specific transcription initiation factor RRN3 × 1 (P36070) RNA polymerase I-specific transcription initiation factor RRN6 × 1 (P32786) RNA polymerase I-specific transcription initiation factor RRN11 × 1 (Q04712) Template strand × 1 Nontemplate strand × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.5 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 3.50 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 44 个其他 PDB 条目、50 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 RPA1_YEAST
Isoform
PDB实体 3
链与序列区间 作者链 A; PDB构建体 1–1664; UniProt 1–1664

DNA-directed RNA polymerase I subunit RPA135

Saccharomyces cerevisiae

UniProt P22138

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 蛋白–DNA 异源复合物 蛋白 × 18 DNA 2 PDB 声明:eicosameric(20) 与全部聚合物数一致 链 B; UniProt 1–1203 未记录 RNA polymerase I-specific transcription initiation factor RRN7 × 1 (P40992) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q01080) DNA-directed RNA polymerase I subunit RPA190 × 1 (P10964) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (P07703) DNA-directed RNA polymerase I subunit RPA14 × 1 (P50106) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase I subunit RPA43 × 1 (P46669) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase I subunit RPA12 × 1 (P32529) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P28000) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) DNA-directed RNA polymerase I subunit RPA34 × 1 (P47006) RNA polymerase I-specific transcription initiation factor RRN3 × 1 (P36070) RNA polymerase I-specific transcription initiation factor RRN6 × 1 (P32786) RNA polymerase I-specific transcription initiation factor RRN11 × 1 (Q04712) Template strand × 1 Nontemplate strand × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.5 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 3.50 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 44 个其他 PDB 条目、50 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 RPA2_YEAST
Isoform
PDB实体 4
链与序列区间 作者链 B; PDB构建体 1–1203; UniProt 1–1203

DNA-directed RNA polymerases I and III subunit RPAC1

Saccharomyces cerevisiae

UniProt P07703

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 蛋白–DNA 异源复合物 蛋白 × 18 DNA 2 PDB 声明:eicosameric(20) 与全部聚合物数一致 链 C; UniProt 1–335 未记录 RNA polymerase I-specific transcription initiation factor RRN7 × 1 (P40992) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q01080) DNA-directed RNA polymerase I subunit RPA190 × 1 (P10964) DNA-directed RNA polymerase I subunit RPA135 × 1 (P22138) DNA-directed RNA polymerase I subunit RPA14 × 1 (P50106) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase I subunit RPA43 × 1 (P46669) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase I subunit RPA12 × 1 (P32529) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P28000) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) DNA-directed RNA polymerase I subunit RPA34 × 1 (P47006) RNA polymerase I-specific transcription initiation factor RRN3 × 1 (P36070) RNA polymerase I-specific transcription initiation factor RRN6 × 1 (P32786) RNA polymerase I-specific transcription initiation factor RRN11 × 1 (Q04712) Template strand × 1 Nontemplate strand × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.5 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 3.50 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 69 个其他 PDB 条目、75 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 RPAC1_YEAST
Isoform
PDB实体 5
链与序列区间 作者链 C; PDB构建体 1–335; UniProt 1–335

DNA-directed RNA polymerase I subunit RPA14

Saccharomyces cerevisiae

UniProt P50106

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 蛋白–DNA 异源复合物 蛋白 × 18 DNA 2 PDB 声明:eicosameric(20) 与全部聚合物数一致 链 D; UniProt 1–137 未记录 RNA polymerase I-specific transcription initiation factor RRN7 × 1 (P40992) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q01080) DNA-directed RNA polymerase I subunit RPA190 × 1 (P10964) DNA-directed RNA polymerase I subunit RPA135 × 1 (P22138) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (P07703) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase I subunit RPA43 × 1 (P46669) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase I subunit RPA12 × 1 (P32529) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P28000) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) DNA-directed RNA polymerase I subunit RPA34 × 1 (P47006) RNA polymerase I-specific transcription initiation factor RRN3 × 1 (P36070) RNA polymerase I-specific transcription initiation factor RRN6 × 1 (P32786) RNA polymerase I-specific transcription initiation factor RRN11 × 1 (Q04712) Template strand × 1 Nontemplate strand × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.5 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 3.50 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 44 个其他 PDB 条目、52 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 RPA14_YEAST
Isoform
PDB实体 6
链与序列区间 作者链 D; PDB构建体 1–137; UniProt 1–137

DNA-directed RNA polymerases I, II, and III subunit RPABC1

Saccharomyces cerevisiae

UniProt P20434

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 蛋白–DNA 异源复合物 蛋白 × 18 DNA 2 PDB 声明:eicosameric(20) 与全部聚合物数一致 链 E; UniProt 1–215 未记录 RNA polymerase I-specific transcription initiation factor RRN7 × 1 (P40992) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q01080) DNA-directed RNA polymerase I subunit RPA190 × 1 (P10964) DNA-directed RNA polymerase I subunit RPA135 × 1 (P22138) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (P07703) DNA-directed RNA polymerase I subunit RPA14 × 1 (P50106) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase I subunit RPA43 × 1 (P46669) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase I subunit RPA12 × 1 (P32529) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P28000) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) DNA-directed RNA polymerase I subunit RPA34 × 1 (P47006) RNA polymerase I-specific transcription initiation factor RRN3 × 1 (P36070) RNA polymerase I-specific transcription initiation factor RRN6 × 1 (P32786) RNA polymerase I-specific transcription initiation factor RRN11 × 1 (Q04712) Template strand × 1 Nontemplate strand × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.5 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 3.50 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 264 个其他 PDB 条目、277 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 RPAB1_YEAST
Isoform
PDB实体 7
链与序列区间 作者链 E; PDB构建体 1–215; UniProt 1–215

DNA-directed RNA polymerases I, II, and III subunit RPABC2

Saccharomyces cerevisiae

UniProt P20435

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 蛋白–DNA 异源复合物 蛋白 × 18 DNA 2 PDB 声明:eicosameric(20) 与全部聚合物数一致 链 F; UniProt 1–155 未记录 RNA polymerase I-specific transcription initiation factor RRN7 × 1 (P40992) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q01080) DNA-directed RNA polymerase I subunit RPA190 × 1 (P10964) DNA-directed RNA polymerase I subunit RPA135 × 1 (P22138) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (P07703) DNA-directed RNA polymerase I subunit RPA14 × 1 (P50106) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerase I subunit RPA43 × 1 (P46669) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase I subunit RPA12 × 1 (P32529) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P28000) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) DNA-directed RNA polymerase I subunit RPA34 × 1 (P47006) RNA polymerase I-specific transcription initiation factor RRN3 × 1 (P36070) RNA polymerase I-specific transcription initiation factor RRN6 × 1 (P32786) RNA polymerase I-specific transcription initiation factor RRN11 × 1 (Q04712) Template strand × 1 Nontemplate strand × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.5 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 3.50 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 280 个其他 PDB 条目、293 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 RPAB2_YEAST
Isoform
PDB实体 8
链与序列区间 作者链 F; PDB构建体 1–155; UniProt 1–155

DNA-directed RNA polymerase I subunit RPA43

Saccharomyces cerevisiae

UniProt P46669

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 蛋白–DNA 异源复合物 蛋白 × 18 DNA 2 PDB 声明:eicosameric(20) 与全部聚合物数一致 链 G; UniProt 1–326 未记录 RNA polymerase I-specific transcription initiation factor RRN7 × 1 (P40992) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q01080) DNA-directed RNA polymerase I subunit RPA190 × 1 (P10964) DNA-directed RNA polymerase I subunit RPA135 × 1 (P22138) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (P07703) DNA-directed RNA polymerase I subunit RPA14 × 1 (P50106) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase I subunit RPA12 × 1 (P32529) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P28000) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) DNA-directed RNA polymerase I subunit RPA34 × 1 (P47006) RNA polymerase I-specific transcription initiation factor RRN3 × 1 (P36070) RNA polymerase I-specific transcription initiation factor RRN6 × 1 (P32786) RNA polymerase I-specific transcription initiation factor RRN11 × 1 (Q04712) Template strand × 1 Nontemplate strand × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.5 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 3.50 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 45 个其他 PDB 条目、53 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 RPA43_YEAST
Isoform
PDB实体 9
链与序列区间 作者链 G; PDB构建体 1–326; UniProt 1–326

DNA-directed RNA polymerases I, II, and III subunit RPABC3

Saccharomyces cerevisiae

UniProt P20436

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 蛋白–DNA 异源复合物 蛋白 × 18 DNA 2 PDB 声明:eicosameric(20) 与全部聚合物数一致 链 H; UniProt 1–146 未记录 RNA polymerase I-specific transcription initiation factor RRN7 × 1 (P40992) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q01080) DNA-directed RNA polymerase I subunit RPA190 × 1 (P10964) DNA-directed RNA polymerase I subunit RPA135 × 1 (P22138) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (P07703) DNA-directed RNA polymerase I subunit RPA14 × 1 (P50106) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase I subunit RPA43 × 1 (P46669) DNA-directed RNA polymerase I subunit RPA12 × 1 (P32529) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P28000) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) DNA-directed RNA polymerase I subunit RPA34 × 1 (P47006) RNA polymerase I-specific transcription initiation factor RRN3 × 1 (P36070) RNA polymerase I-specific transcription initiation factor RRN6 × 1 (P32786) RNA polymerase I-specific transcription initiation factor RRN11 × 1 (Q04712) Template strand × 1 Nontemplate strand × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.5 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 3.50 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 264 个其他 PDB 条目、277 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 RPAB3_YEAST
Isoform
PDB实体 10
链与序列区间 作者链 H; PDB构建体 1–146; UniProt 1–146

DNA-directed RNA polymerase I subunit RPA12

Saccharomyces cerevisiae

UniProt P32529

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 蛋白–DNA 异源复合物 蛋白 × 18 DNA 2 PDB 声明:eicosameric(20) 与全部聚合物数一致 链 I; UniProt 1–125 未记录 RNA polymerase I-specific transcription initiation factor RRN7 × 1 (P40992) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q01080) DNA-directed RNA polymerase I subunit RPA190 × 1 (P10964) DNA-directed RNA polymerase I subunit RPA135 × 1 (P22138) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (P07703) DNA-directed RNA polymerase I subunit RPA14 × 1 (P50106) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase I subunit RPA43 × 1 (P46669) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P28000) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) DNA-directed RNA polymerase I subunit RPA34 × 1 (P47006) RNA polymerase I-specific transcription initiation factor RRN3 × 1 (P36070) RNA polymerase I-specific transcription initiation factor RRN6 × 1 (P32786) RNA polymerase I-specific transcription initiation factor RRN11 × 1 (Q04712) Template strand × 1 Nontemplate strand × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.5 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 3.50 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 43 个其他 PDB 条目、49 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 RPA12_YEAST
Isoform
PDB实体 11
链与序列区间 作者链 I; PDB构建体 1–125; UniProt 1–125

DNA-directed RNA polymerases I, II, and III subunit RPABC5

Saccharomyces cerevisiae

UniProt P22139

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 蛋白–DNA 异源复合物 蛋白 × 18 DNA 2 PDB 声明:eicosameric(20) 与全部聚合物数一致 链 J; UniProt 1–70 未记录 RNA polymerase I-specific transcription initiation factor RRN7 × 1 (P40992) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q01080) DNA-directed RNA polymerase I subunit RPA190 × 1 (P10964) DNA-directed RNA polymerase I subunit RPA135 × 1 (P22138) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (P07703) DNA-directed RNA polymerase I subunit RPA14 × 1 (P50106) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase I subunit RPA43 × 1 (P46669) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase I subunit RPA12 × 1 (P32529) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P28000) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) DNA-directed RNA polymerase I subunit RPA34 × 1 (P47006) RNA polymerase I-specific transcription initiation factor RRN3 × 1 (P36070) RNA polymerase I-specific transcription initiation factor RRN6 × 1 (P32786) RNA polymerase I-specific transcription initiation factor RRN11 × 1 (Q04712) Template strand × 1 Nontemplate strand × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.5 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 3.50 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 263 个其他 PDB 条目、276 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 RPAB5_YEAST
Isoform
PDB实体 12
链与序列区间 作者链 J; PDB构建体 1–70; UniProt 1–70

DNA-directed RNA polymerases I and III subunit RPAC2

Saccharomyces cerevisiae

UniProt P28000

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 蛋白–DNA 异源复合物 蛋白 × 18 DNA 2 PDB 声明:eicosameric(20) 与全部聚合物数一致 链 K; UniProt 1–142 未记录 RNA polymerase I-specific transcription initiation factor RRN7 × 1 (P40992) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q01080) DNA-directed RNA polymerase I subunit RPA190 × 1 (P10964) DNA-directed RNA polymerase I subunit RPA135 × 1 (P22138) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (P07703) DNA-directed RNA polymerase I subunit RPA14 × 1 (P50106) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase I subunit RPA43 × 1 (P46669) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase I subunit RPA12 × 1 (P32529) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) DNA-directed RNA polymerase I subunit RPA34 × 1 (P47006) RNA polymerase I-specific transcription initiation factor RRN3 × 1 (P36070) RNA polymerase I-specific transcription initiation factor RRN6 × 1 (P32786) RNA polymerase I-specific transcription initiation factor RRN11 × 1 (Q04712) Template strand × 1 Nontemplate strand × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.5 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 3.50 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 69 个其他 PDB 条目、75 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 RPAC2_YEAST
Isoform
PDB实体 13
链与序列区间 作者链 K; PDB构建体 1–142; UniProt 1–142

DNA-directed RNA polymerases I, II, and III subunit RPABC4

Saccharomyces cerevisiae

UniProt P40422

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 蛋白–DNA 异源复合物 蛋白 × 18 DNA 2 PDB 声明:eicosameric(20) 与全部聚合物数一致 链 L; UniProt 1–70 未记录 RNA polymerase I-specific transcription initiation factor RRN7 × 1 (P40992) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q01080) DNA-directed RNA polymerase I subunit RPA190 × 1 (P10964) DNA-directed RNA polymerase I subunit RPA135 × 1 (P22138) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (P07703) DNA-directed RNA polymerase I subunit RPA14 × 1 (P50106) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase I subunit RPA43 × 1 (P46669) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase I subunit RPA12 × 1 (P32529) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P28000) DNA-directed RNA polymerase I subunit RPA34 × 1 (P47006) RNA polymerase I-specific transcription initiation factor RRN3 × 1 (P36070) RNA polymerase I-specific transcription initiation factor RRN6 × 1 (P32786) RNA polymerase I-specific transcription initiation factor RRN11 × 1 (Q04712) Template strand × 1 Nontemplate strand × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.5 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 3.50 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 263 个其他 PDB 条目、276 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 RPAB4_YEAST
Isoform
PDB实体 14
链与序列区间 作者链 L; PDB构建体 1–70; UniProt 1–70

DNA-directed RNA polymerase I subunit RPA34

Saccharomyces cerevisiae

UniProt P47006

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 蛋白–DNA 异源复合物 蛋白 × 18 DNA 2 PDB 声明:eicosameric(20) 与全部聚合物数一致 链 N; UniProt 1–233 未记录 RNA polymerase I-specific transcription initiation factor RRN7 × 1 (P40992) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q01080) DNA-directed RNA polymerase I subunit RPA190 × 1 (P10964) DNA-directed RNA polymerase I subunit RPA135 × 1 (P22138) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (P07703) DNA-directed RNA polymerase I subunit RPA14 × 1 (P50106) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase I subunit RPA43 × 1 (P46669) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase I subunit RPA12 × 1 (P32529) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P28000) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) RNA polymerase I-specific transcription initiation factor RRN3 × 1 (P36070) RNA polymerase I-specific transcription initiation factor RRN6 × 1 (P32786) RNA polymerase I-specific transcription initiation factor RRN11 × 1 (Q04712) Template strand × 1 Nontemplate strand × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.5 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 3.50 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 38 个其他 PDB 条目、44 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 RPA34_YEAST
Isoform
PDB实体 15
链与序列区间 作者链 N; PDB构建体 1–233; UniProt 1–233

RNA polymerase I-specific transcription initiation factor RRN3

Saccharomyces cerevisiae

UniProt P36070

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 蛋白–DNA 异源复合物 蛋白 × 18 DNA 2 PDB 声明:eicosameric(20) 与全部聚合物数一致 链 O; UniProt 1–627 未记录 RNA polymerase I-specific transcription initiation factor RRN7 × 1 (P40992) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q01080) DNA-directed RNA polymerase I subunit RPA190 × 1 (P10964) DNA-directed RNA polymerase I subunit RPA135 × 1 (P22138) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (P07703) DNA-directed RNA polymerase I subunit RPA14 × 1 (P50106) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase I subunit RPA43 × 1 (P46669) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase I subunit RPA12 × 1 (P32529) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P28000) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) DNA-directed RNA polymerase I subunit RPA34 × 1 (P47006) RNA polymerase I-specific transcription initiation factor RRN6 × 1 (P32786) RNA polymerase I-specific transcription initiation factor RRN11 × 1 (Q04712) Template strand × 1 Nontemplate strand × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.5 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 3.50 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 14 个其他 PDB 条目、14 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 RRN3_YEAST
Isoform
PDB实体 16
链与序列区间 作者链 O; PDB构建体 1–627; UniProt 1–627

RNA polymerase I-specific transcription initiation factor RRN6

Saccharomyces cerevisiae

UniProt P32786

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 蛋白–DNA 异源复合物 蛋白 × 18 DNA 2 PDB 声明:eicosameric(20) 与全部聚合物数一致 链 S; UniProt 1–894 未记录 RNA polymerase I-specific transcription initiation factor RRN7 × 1 (P40992) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q01080) DNA-directed RNA polymerase I subunit RPA190 × 1 (P10964) DNA-directed RNA polymerase I subunit RPA135 × 1 (P22138) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (P07703) DNA-directed RNA polymerase I subunit RPA14 × 1 (P50106) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase I subunit RPA43 × 1 (P46669) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase I subunit RPA12 × 1 (P32529) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P28000) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) DNA-directed RNA polymerase I subunit RPA34 × 1 (P47006) RNA polymerase I-specific transcription initiation factor RRN3 × 1 (P36070) RNA polymerase I-specific transcription initiation factor RRN11 × 1 (Q04712) Template strand × 1 Nontemplate strand × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.5 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 3.50 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 16 个其他 PDB 条目、21 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 RRN6_YEAST
Isoform
PDB实体 17
链与序列区间 作者链 S; PDB构建体 1–894; UniProt 1–894

RNA polymerase I-specific transcription initiation factor RRN11

Saccharomyces cerevisiae

UniProt Q04712

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 蛋白–DNA 异源复合物 蛋白 × 18 DNA 2 PDB 声明:eicosameric(20) 与全部聚合物数一致 链 R; UniProt 1–507 未记录 RNA polymerase I-specific transcription initiation factor RRN7 × 1 (P40992) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q01080) DNA-directed RNA polymerase I subunit RPA190 × 1 (P10964) DNA-directed RNA polymerase I subunit RPA135 × 1 (P22138) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (P07703) DNA-directed RNA polymerase I subunit RPA14 × 1 (P50106) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase I subunit RPA43 × 1 (P46669) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase I subunit RPA12 × 1 (P32529) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P28000) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) DNA-directed RNA polymerase I subunit RPA34 × 1 (P47006) RNA polymerase I-specific transcription initiation factor RRN3 × 1 (P36070) RNA polymerase I-specific transcription initiation factor RRN6 × 1 (P32786) Template strand × 1 Nontemplate strand × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY cryo-EM缓冲液:pH 7.5 cryo-EM玻璃化条件:冷冻剂 ETHANE 分辨率 3.50 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 16 个其他 PDB 条目、21 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 RRN11_YEAST
Isoform
PDB实体 18
链与序列区间 作者链 R; PDB构建体 1–507; UniProt 1–507

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

SAXS 散射曲线 SAXS Profile

SAXS profile for 6ruo

P(r) 距离分布 P(r) Distribution

P(r) distribution for 6ruo
下载 Download

2. 结构基本信息 2. Structure Basics

条目编号 entry_id6ruo
沉积日期 deposition_date2019-05-28
结构标题 titleRNA Polymerase I Open Complex conformation 1
关键词 keywordsRNA Polymerase I, Pre-initiation complex, PIC, Open Complex, OC, Core Factor, CF, Rrn3, TRANSCRIPTION, DNA opening; TRANSCRIPTION
实验方法 methodELECTRON MICROSCOPY

3. SAXS 参数 (CRYSOL 理论计算) 3. SAXS Parameters (CRYSOL)

回转半径 Rg (Guinier) rg_guinier65.83
回转半径 Rg (电子) rg_electron65.60
零角强度 I(0) i07552960000.00
分子量 molecular_weight723740.0 kDa
排除体积 excluded_volume900770 ų
包络体积 envelope_volume1360600 ų
水化壳体积 shell_volume167120 ų
包络直径 envelope_diameter221.9
壳层 Rg shell_rg70.09
包络 Rg envelope_rg64.87
形状 Rg shape_rg65.62
总 Rg total_rg65.60
总原子数 total_atoms50792
残基数 n_residues6179
球谐函数阶数 n_harmonics20
q 范围 q_range— – 0.5000 −1
数据点数 n_points101
壳层类型 shell_typedirectional
溶剂电子密度 solvent_density0.3340 e/ų
壳层衬度 contrast_shell0.0300 e/ų
CRYSOL 版本 crysol_version4.1.3

4. P(r) 距离分布 (GNOM 反演) 4. P(r) Analysis (GNOM)

最大尺寸 Dmax dmax228.0
Rg (实空间) rg_real65.73
Rg 误差 (实空间) rg_real_error1.99
I(0) (实空间) i0_real7.5530e+09
I(0) 误差 (实空间) i0_real_error1.6870e+08
Rg (倒空间) rg_reciprocal65.88
I(0) (倒空间) i0_reciprocal7555000000.0000
解质量估计 total_estimate0.8699
解质量评级 solution_quality GOOD a GOOD solution
P(r) 峰数 n_peaks2
主峰位置 r_peak_primary76.0
偏度 Skewness skewness0.280
峰度 Kurtosis kurtosis-0.477
角度范围 angular_range— – 0.1200 −1
当前正则化参数 α current_alpha0.0014
最高正则化参数 α highest_alpha1104000000.0000
实空间数据点数 n_real_points25
GNOM 版本 gnom_version4.1.3
质量判据 quality_criteria AN1: 0.000; Oscil: 0.828; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.993; Smooth: 0.827

5. 晶体学与实验 5. Crystallography & Experiment

6. 实体与聚合物信息 Entities & Polymers (21)

7. 折叠分类 (SCOP + CATH) 15 domains

CATH v4.4 (15 domains)

结构域编号 domain_id6ruoB04
类 Class class3 — Alpha Beta
架构 Architecture architecture90 — Alpha-Beta Complex
拓扑 Topology topology1110 — Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3
同源超家族 H-superfamily homologous superfamily10 — RNA polymerase Rpb2, domain 2
结构域编号 domain_id6ruoB05
类 Class class3 — Alpha Beta
架构 Architecture architecture90 — Alpha-Beta Complex
拓扑 Topology topology1070 — Hypothetical Protein Ta0175; Chain: A, domain 2
同源超家族 H-superfamily homologous superfamily20
结构域编号 domain_id6ruoB06
类 Class class2 — Mainly Beta
架构 Architecture architecture40 — Beta Barrel
拓扑 Topology topology270 — Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6
同源超家族 H-superfamily homologous superfamily10 — DNA-directed RNA polymerase, subunit 2, domain 6
结构域编号 domain_id6ruoB07
类 Class class2 — Mainly Beta
架构 Architecture architecture40 — Beta Barrel
拓扑 Topology topology50 — OB fold (Dihydrolipoamide Acetyltransferase, E2P)
同源超家族 H-superfamily homologous superfamily150 — RNA polymerase II, Rpb2 subunit, wall domain
结构域编号 domain_id6ruoB08
类 Class class3 — Alpha Beta
架构 Architecture architecture90 — Alpha-Beta Complex
拓扑 Topology topology1800 — DCoH-like
同源超家族 H-superfamily homologous superfamily10 — RNA polymerase alpha subunit dimerisation domain
结构域编号 domain_id6ruoC01
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology1360 — Gyrase A; domain 2
同源超家族 H-superfamily homologous superfamily10 — RNA polymerase, RBP11-like subunit
结构域编号 domain_id6ruoC02
类 Class class2 — Mainly Beta
架构 Architecture architecture170 — Beta Complex
拓扑 Topology topology120 — RNA Polymerase Alpha Subunit; Chain A, domain 2
同源超家族 H-superfamily homologous superfamily12 — DNA-directed RNA polymerase, insert domain
结构域编号 domain_id6ruoE01
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology1340 — Dna-directed Rna Polymerases I, Ii, And Iii 27 Kd Polypeptide; Chain: A; domain 1
同源超家族 H-superfamily homologous superfamily10 — RNA polymerase, Rpb5, N-terminal domain
结构域编号 domain_id6ruoE02
类 Class class3 — Alpha Beta
架构 Architecture architecture90 — Alpha-Beta Complex
拓扑 Topology topology940 — Eukaryotic RPB6 RNA polymerase subunit
同源超家族 H-superfamily homologous superfamily20 — RPB5-like RNA polymerase subunit
结构域编号 domain_id6ruoF00
类 Class class3 — Alpha Beta
架构 Architecture architecture90 — Alpha-Beta Complex
拓扑 Topology topology940 — Eukaryotic RPB6 RNA polymerase subunit
同源超家族 H-superfamily homologous superfamily10 — RNA polymerase subunit, RPB6/omega
结构域编号 domain_id6ruoG01
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology1490 — Dna Ligase; domain 1
同源超家族 H-superfamily homologous superfamily120 — RNA polymerase Rpb7-like, N-terminal domain
结构域编号 domain_id6ruoH00
类 Class class2 — Mainly Beta
架构 Architecture architecture40 — Beta Barrel
拓扑 Topology topology50 — OB fold (Dihydrolipoamide Acetyltransferase, E2P)
同源超家族 H-superfamily homologous superfamily140 — Nucleic acid-binding proteins
结构域编号 domain_id6ruoJ00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology10 — Arc Repressor Mutant, subunit A
同源超家族 H-superfamily homologous superfamily60 — Homeodomain-like
结构域编号 domain_id6ruoK00
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology1360 — Gyrase A; domain 2
同源超家族 H-superfamily homologous superfamily10 — RNA polymerase, RBP11-like subunit
结构域编号 domain_id6ruoL00
类 Class class2 — Mainly Beta
架构 Architecture architecture20 — Single Sheet
拓扑 Topology topology28 — Rubrerythrin, domain 2
同源超家族 H-superfamily homologous superfamily30 — RNA polymerase ii, chain L

8. 引用文献 (1)

9. 文件与曲线 (10)