8iai

Structure of mammalian spectrin-actin junctional complex of membrane skeleton, State II, Global map

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Adducin 1

OrganismNot specified

UniProt A0A8D1Q0D0

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 31 Beta-adducin × 2 (A0A480JMR2) Dematin actin binding protein × 3 (A0A8D1E7W3) Actin, cytoplasmic 1 × 11 (Q6QAQ1) Spectrin beta chain × 8 (A0A480J001) Tropomyosin-1.9 × 1 Tropomyosin 3 × 1 (Q6QA25) Tropomodulin-1 × 1 (A0A287BCZ0) SH3 domain-binding glutamic acid-rich-like protein × 1 (A0A4X1V2Q0) ADENOSINE-5'-DIPHOSPHATE × 11 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A8D1Q0D0_PIG
Isoform —
PDB entities 1
Chains and sequence ranges Author chain 1; PDBConstruct 1–744; UniProt 11–754 Author chain 2; PDBConstruct 1–744; UniProt 11–754 Author chain 9; PDBConstruct 1–744; UniProt 11–754

Beta-adducin

OrganismNot specified

UniProt A0A480JMR2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 31 Adducin 1 × 3 (A0A8D1Q0D0) Dematin actin binding protein × 3 (A0A8D1E7W3) Actin, cytoplasmic 1 × 11 (Q6QAQ1) Spectrin beta chain × 8 (A0A480J001) Tropomyosin-1.9 × 1 Tropomyosin 3 × 1 (Q6QA25) Tropomodulin-1 × 1 (A0A287BCZ0) SH3 domain-binding glutamic acid-rich-like protein × 1 (A0A4X1V2Q0) ADENOSINE-5'-DIPHOSPHATE × 11 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A480JMR2_PIG
Isoform —
PDB entities 2
Chains and sequence ranges Author chain 3; PDBConstruct 1–724; UniProt 1–724 Author chain 4; PDBConstruct 1–724; UniProt 1–724

Dematin actin binding protein

OrganismNot specified

UniProt A0A8D1E7W3

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 31 Adducin 1 × 3 (A0A8D1Q0D0) Beta-adducin × 2 (A0A480JMR2) Actin, cytoplasmic 1 × 11 (Q6QAQ1) Spectrin beta chain × 8 (A0A480J001) Tropomyosin-1.9 × 1 Tropomyosin 3 × 1 (Q6QA25) Tropomodulin-1 × 1 (A0A287BCZ0) SH3 domain-binding glutamic acid-rich-like protein × 1 (A0A4X1V2Q0) ADENOSINE-5'-DIPHOSPHATE × 11 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A8D1E7W3_PIG
Isoform —
PDB entities 3
Chains and sequence ranges Author chain 5; PDBConstruct 1–405; UniProt 1–405 Author chain 6; PDBConstruct 1–405; UniProt 1–405 Author chain 7; PDBConstruct 1–405; UniProt 1–405

Actin, cytoplasmic 1

OrganismNot specified

UniProt Q6QAQ1

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 31 Adducin 1 × 3 (A0A8D1Q0D0) Beta-adducin × 2 (A0A480JMR2) Dematin actin binding protein × 3 (A0A8D1E7W3) Spectrin beta chain × 8 (A0A480J001) Tropomyosin-1.9 × 1 Tropomyosin 3 × 1 (Q6QA25) Tropomodulin-1 × 1 (A0A287BCZ0) SH3 domain-binding glutamic acid-rich-like protein × 1 (A0A4X1V2Q0) ADENOSINE-5'-DIPHOSPHATE × 11 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ACTB_PIG
Isoform —
PDB entities 4
Chains and sequence ranges Author chain A; PDBConstruct 1–375; UniProt 1–375 Author chain B; PDBConstruct 1–375; UniProt 1–375 Author chain C; PDBConstruct 1–375; UniProt 1–375 Author chain D; PDBConstruct 1–375; UniProt 1–375 Author chain E; PDBConstruct 1–375; UniProt 1–375 Author chain F; PDBConstruct 1–375; UniProt 1–375 Author chain G; PDBConstruct 1–375; UniProt 1–375 Author chain H; PDBConstruct 1–375; UniProt 1–375 Author chain I; PDBConstruct 1–375; UniProt 1–375 Author chain J; PDBConstruct 1–375; UniProt 1–375 Author chain K; PDBConstruct 1–375; UniProt 1–375

Spectrin beta chain

OrganismNot specified

UniProt A0A480J001

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 31 Adducin 1 × 3 (A0A8D1Q0D0) Beta-adducin × 2 (A0A480JMR2) Dematin actin binding protein × 3 (A0A8D1E7W3) Actin, cytoplasmic 1 × 11 (Q6QAQ1) Tropomyosin-1.9 × 1 Tropomyosin 3 × 1 (Q6QA25) Tropomodulin-1 × 1 (A0A287BCZ0) SH3 domain-binding glutamic acid-rich-like protein × 1 (A0A4X1V2Q0) ADENOSINE-5'-DIPHOSPHATE × 11 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A480J001_PIG
Isoform —
PDB entities 5
Chains and sequence ranges Author chain M; PDBConstruct 1–2148; UniProt 1–2148 Author chain N; PDBConstruct 1–2148; UniProt 1–2148 Author chain O; PDBConstruct 1–2148; UniProt 1–2148 Author chain P; PDBConstruct 1–2148; UniProt 1–2148 Author chain Q; PDBConstruct 1–2148; UniProt 1–2148 Author chain R; PDBConstruct 1–2148; UniProt 1–2148 Author chain S; PDBConstruct 1–2148; UniProt 1–2148 Author chain T; PDBConstruct 1–2148; UniProt 1–2148

Tropomyosin 3

OrganismNot specified

UniProt Q6QA25

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 31 Adducin 1 × 3 (A0A8D1Q0D0) Beta-adducin × 2 (A0A480JMR2) Dematin actin binding protein × 3 (A0A8D1E7W3) Actin, cytoplasmic 1 × 11 (Q6QAQ1) Spectrin beta chain × 8 (A0A480J001) Tropomyosin-1.9 × 1 Tropomodulin-1 × 1 (A0A287BCZ0) SH3 domain-binding glutamic acid-rich-like protein × 1 (A0A4X1V2Q0) ADENOSINE-5'-DIPHOSPHATE × 11 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name Q6QA25_PIG
Isoform —
PDB entities 7
Chains and sequence ranges Author chain V; PDBConstruct 1–248; UniProt 1–248

Tropomodulin-1

OrganismNot specified

UniProt A0A287BCZ0

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 31 Adducin 1 × 3 (A0A8D1Q0D0) Beta-adducin × 2 (A0A480JMR2) Dematin actin binding protein × 3 (A0A8D1E7W3) Actin, cytoplasmic 1 × 11 (Q6QAQ1) Spectrin beta chain × 8 (A0A480J001) Tropomyosin-1.9 × 1 Tropomyosin 3 × 1 (Q6QA25) SH3 domain-binding glutamic acid-rich-like protein × 1 (A0A4X1V2Q0) ADENOSINE-5'-DIPHOSPHATE × 11 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A287BCZ0_PIG
Isoform —
PDB entities 8
Chains and sequence ranges Author chain Y; PDBConstruct 1–359; UniProt 1–359

SH3 domain-binding glutamic acid-rich-like protein

OrganismNot specified

UniProt A0A4X1V2Q0

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 31 Adducin 1 × 3 (A0A8D1Q0D0) Beta-adducin × 2 (A0A480JMR2) Dematin actin binding protein × 3 (A0A8D1E7W3) Actin, cytoplasmic 1 × 11 (Q6QAQ1) Spectrin beta chain × 8 (A0A480J001) Tropomyosin-1.9 × 1 Tropomyosin 3 × 1 (Q6QA25) Tropomodulin-1 × 1 (A0A287BCZ0) ADENOSINE-5'-DIPHOSPHATE × 11 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A4X1V2Q0_PIG
Isoform —
PDB entities 9
Chains and sequence ranges Author chain Z; PDBConstruct 1–107; UniProt 1–107

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id8iai
Deposition date deposition_date2023-02-08
Structure title titleStructure of mammalian spectrin-actin junctional complex of membrane skeleton, State II, Global map
Keywords keywordsMacrocomplex, membrane skeleton, spectrin-actin junction, MEMBRANE PROTEIN; MEMBRANE PROTEIN
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

8iai__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

8iai__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

8iai__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)0.00 Å
Rg (electron density)116.50 Å
Total Rg115.90 Å
Atom count60300
Residues7612
Excluded volume1074100 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 8iai__assembly_1__model_1 31-meric (31) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (10)

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6. Fold Classification (SCOP + CATH) 11 domains

CATH v4.4 (11 domains)

Domain ID domain_id8iaiA01
Class class3 — Alpha Beta
Architecture architecture90 — Alpha-Beta Complex
Topology topology640 — Actin; Chain A, domain 4
Homologous superfamily homologous superfamily10 — ATPase, substrate binding domain, subdomain 4
Domain ID domain_id8iaiB01
Class class3 — Alpha Beta
Architecture architecture90 — Alpha-Beta Complex
Topology topology640 — Actin; Chain A, domain 4
Homologous superfamily homologous superfamily10 — ATPase, substrate binding domain, subdomain 4
Domain ID domain_id8iaiC01
Class class3 — Alpha Beta
Architecture architecture90 — Alpha-Beta Complex
Topology topology640 — Actin; Chain A, domain 4
Homologous superfamily homologous superfamily10 — ATPase, substrate binding domain, subdomain 4
Domain ID domain_id8iaiD01
Class class3 — Alpha Beta
Architecture architecture90 — Alpha-Beta Complex
Topology topology640 — Actin; Chain A, domain 4
Homologous superfamily homologous superfamily10 — ATPase, substrate binding domain, subdomain 4
Domain ID domain_id8iaiE01
Class class3 — Alpha Beta
Architecture architecture90 — Alpha-Beta Complex
Topology topology640 — Actin; Chain A, domain 4
Homologous superfamily homologous superfamily10 — ATPase, substrate binding domain, subdomain 4
Domain ID domain_id8iaiF01
Class class3 — Alpha Beta
Architecture architecture90 — Alpha-Beta Complex
Topology topology640 — Actin; Chain A, domain 4
Homologous superfamily homologous superfamily10 — ATPase, substrate binding domain, subdomain 4
Domain ID domain_id8iaiG01
Class class3 — Alpha Beta
Architecture architecture90 — Alpha-Beta Complex
Topology topology640 — Actin; Chain A, domain 4
Homologous superfamily homologous superfamily10 — ATPase, substrate binding domain, subdomain 4
Domain ID domain_id8iaiH01
Class class3 — Alpha Beta
Architecture architecture90 — Alpha-Beta Complex
Topology topology640 — Actin; Chain A, domain 4
Homologous superfamily homologous superfamily10 — ATPase, substrate binding domain, subdomain 4
Domain ID domain_id8iaiI01
Class class3 — Alpha Beta
Architecture architecture90 — Alpha-Beta Complex
Topology topology640 — Actin; Chain A, domain 4
Homologous superfamily homologous superfamily10 — ATPase, substrate binding domain, subdomain 4
Domain ID domain_id8iaiJ01
Class class3 — Alpha Beta
Architecture architecture90 — Alpha-Beta Complex
Topology topology640 — Actin; Chain A, domain 4
Homologous superfamily homologous superfamily10 — ATPase, substrate binding domain, subdomain 4
Domain ID domain_id8iaiK01
Class class3 — Alpha Beta
Architecture architecture90 — Alpha-Beta Complex
Topology topology640 — Actin; Chain A, domain 4
Homologous superfamily homologous superfamily10 — ATPase, substrate binding domain, subdomain 4
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7. Citations (1)