9se7

Structure of Cytochrome C6 bound Photosystem I from Chlamydomonas reinhardtii at 2.07 A resolution

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Photosystem I P700 chlorophyll a apoprotein A1

OrganismNot specified

UniProt P12154

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 10 Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P09144) Photosystem I iron-sulfur center × 1 (Q00914) Photosystem I reaction center subunit II, chloroplastic × 1 (Q39615) Photosystem I reaction center subunit IV, chloroplastic × 1 (P12352) Photosystem I reaction center subunit VIII × 1 (A8IFG7) Photosystem I reaction center subunit IX × 1 (P59777) Cytochrome c6, chloroplastic × 1 (P08197) Photosystem I reaction center subunit III, chloroplastic × 1 (P12356) Photosystem I reaction center subunit XI, chloroplastic × 1 (A8IL32) CHLOROPHYLL A × 91 PHYLLOQUINONE × 2 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 3 BETA-CAROTENE × 15 IRON/SULFUR CLUSTER × 3 DODECYL-ALPHA-D-MALTOSIDE × 3 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 5 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 1 (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL × 2 HEME C × 1 water × 8 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSAA_CHLRE
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–742; UniProt 10–751

Photosystem I P700 chlorophyll a apoprotein A2

OrganismNot specified

UniProt P09144

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 10 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P12154) Photosystem I iron-sulfur center × 1 (Q00914) Photosystem I reaction center subunit II, chloroplastic × 1 (Q39615) Photosystem I reaction center subunit IV, chloroplastic × 1 (P12352) Photosystem I reaction center subunit VIII × 1 (A8IFG7) Photosystem I reaction center subunit IX × 1 (P59777) Cytochrome c6, chloroplastic × 1 (P08197) Photosystem I reaction center subunit III, chloroplastic × 1 (P12356) Photosystem I reaction center subunit XI, chloroplastic × 1 (A8IL32) CHLOROPHYLL A × 91 PHYLLOQUINONE × 2 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 3 BETA-CAROTENE × 15 IRON/SULFUR CLUSTER × 3 DODECYL-ALPHA-D-MALTOSIDE × 3 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 5 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 1 (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL × 2 HEME C × 1 water × 8 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSAB_CHLRE
Isoform —
PDB entities 2
Chains and sequence ranges Author chain B; PDBConstruct 1–733; UniProt 3–735

Photosystem I iron-sulfur center

OrganismNot specified

UniProt Q00914

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 10 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P12154) Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P09144) Photosystem I reaction center subunit II, chloroplastic × 1 (Q39615) Photosystem I reaction center subunit IV, chloroplastic × 1 (P12352) Photosystem I reaction center subunit VIII × 1 (A8IFG7) Photosystem I reaction center subunit IX × 1 (P59777) Cytochrome c6, chloroplastic × 1 (P08197) Photosystem I reaction center subunit III, chloroplastic × 1 (P12356) Photosystem I reaction center subunit XI, chloroplastic × 1 (A8IL32) CHLOROPHYLL A × 91 PHYLLOQUINONE × 2 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 3 BETA-CAROTENE × 15 IRON/SULFUR CLUSTER × 3 DODECYL-ALPHA-D-MALTOSIDE × 3 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 5 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 1 (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL × 2 HEME C × 1 water × 8 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSAC_CHLRE
Isoform —
PDB entities 3
Chains and sequence ranges Author chain C; PDBConstruct 1–80; UniProt 2–81

Photosystem I reaction center subunit II, chloroplastic

OrganismNot specified

UniProt Q39615

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 10 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P12154) Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P09144) Photosystem I iron-sulfur center × 1 (Q00914) Photosystem I reaction center subunit IV, chloroplastic × 1 (P12352) Photosystem I reaction center subunit VIII × 1 (A8IFG7) Photosystem I reaction center subunit IX × 1 (P59777) Cytochrome c6, chloroplastic × 1 (P08197) Photosystem I reaction center subunit III, chloroplastic × 1 (P12356) Photosystem I reaction center subunit XI, chloroplastic × 1 (A8IL32) CHLOROPHYLL A × 91 PHYLLOQUINONE × 2 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 3 BETA-CAROTENE × 15 IRON/SULFUR CLUSTER × 3 DODECYL-ALPHA-D-MALTOSIDE × 3 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 5 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 1 (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL × 2 HEME C × 1 water × 8 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSAD_CHLRE
Isoform —
PDB entities 4
Chains and sequence ranges Author chain D; PDBConstruct 1–144; UniProt 53–196

Photosystem I reaction center subunit IV, chloroplastic

OrganismNot specified

UniProt P12352

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 10 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P12154) Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P09144) Photosystem I iron-sulfur center × 1 (Q00914) Photosystem I reaction center subunit II, chloroplastic × 1 (Q39615) Photosystem I reaction center subunit VIII × 1 (A8IFG7) Photosystem I reaction center subunit IX × 1 (P59777) Cytochrome c6, chloroplastic × 1 (P08197) Photosystem I reaction center subunit III, chloroplastic × 1 (P12356) Photosystem I reaction center subunit XI, chloroplastic × 1 (A8IL32) CHLOROPHYLL A × 91 PHYLLOQUINONE × 2 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 3 BETA-CAROTENE × 15 IRON/SULFUR CLUSTER × 3 DODECYL-ALPHA-D-MALTOSIDE × 3 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 5 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 1 (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL × 2 HEME C × 1 water × 8 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSAE_CHLRE
Isoform —
PDB entities 5
Chains and sequence ranges Author chain E; PDBConstruct 1–64; UniProt 34–97

Photosystem I reaction center subunit VIII

OrganismNot specified

UniProt A8IFG7

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 10 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P12154) Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P09144) Photosystem I iron-sulfur center × 1 (Q00914) Photosystem I reaction center subunit II, chloroplastic × 1 (Q39615) Photosystem I reaction center subunit IV, chloroplastic × 1 (P12352) Photosystem I reaction center subunit IX × 1 (P59777) Cytochrome c6, chloroplastic × 1 (P08197) Photosystem I reaction center subunit III, chloroplastic × 1 (P12356) Photosystem I reaction center subunit XI, chloroplastic × 1 (A8IL32) CHLOROPHYLL A × 91 PHYLLOQUINONE × 2 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 3 BETA-CAROTENE × 15 IRON/SULFUR CLUSTER × 3 DODECYL-ALPHA-D-MALTOSIDE × 3 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 5 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 1 (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL × 2 HEME C × 1 water × 8 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A8IFG7_CHLRE
Isoform —
PDB entities 6
Chains and sequence ranges Author chain I; PDBConstruct 1–37; UniProt 68–104

Photosystem I reaction center subunit IX

OrganismNot specified

UniProt P59777

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 10 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P12154) Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P09144) Photosystem I iron-sulfur center × 1 (Q00914) Photosystem I reaction center subunit II, chloroplastic × 1 (Q39615) Photosystem I reaction center subunit IV, chloroplastic × 1 (P12352) Photosystem I reaction center subunit VIII × 1 (A8IFG7) Cytochrome c6, chloroplastic × 1 (P08197) Photosystem I reaction center subunit III, chloroplastic × 1 (P12356) Photosystem I reaction center subunit XI, chloroplastic × 1 (A8IL32) CHLOROPHYLL A × 91 PHYLLOQUINONE × 2 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 3 BETA-CAROTENE × 15 IRON/SULFUR CLUSTER × 3 DODECYL-ALPHA-D-MALTOSIDE × 3 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 5 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 1 (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL × 2 HEME C × 1 water × 8 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSAJ_CHLRE
Isoform —
PDB entities 7
Chains and sequence ranges Author chain J; PDBConstruct 2–41; UniProt 1–40

Cytochrome c6, chloroplastic

OrganismNot specified

UniProt P08197

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 10 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P12154) Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P09144) Photosystem I iron-sulfur center × 1 (Q00914) Photosystem I reaction center subunit II, chloroplastic × 1 (Q39615) Photosystem I reaction center subunit IV, chloroplastic × 1 (P12352) Photosystem I reaction center subunit VIII × 1 (A8IFG7) Photosystem I reaction center subunit IX × 1 (P59777) Photosystem I reaction center subunit III, chloroplastic × 1 (P12356) Photosystem I reaction center subunit XI, chloroplastic × 1 (A8IL32) CHLOROPHYLL A × 91 PHYLLOQUINONE × 2 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 3 BETA-CAROTENE × 15 IRON/SULFUR CLUSTER × 3 DODECYL-ALPHA-D-MALTOSIDE × 3 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 5 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 1 (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL × 2 HEME C × 1 water × 8 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CYC6_CHLRE
Isoform —
PDB entities 8
Chains and sequence ranges Author chain T; PDBConstruct 1–89; UniProt 59–147

Photosystem I reaction center subunit III, chloroplastic

OrganismNot specified

UniProt P12356

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 10 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P12154) Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P09144) Photosystem I iron-sulfur center × 1 (Q00914) Photosystem I reaction center subunit II, chloroplastic × 1 (Q39615) Photosystem I reaction center subunit IV, chloroplastic × 1 (P12352) Photosystem I reaction center subunit VIII × 1 (A8IFG7) Photosystem I reaction center subunit IX × 1 (P59777) Cytochrome c6, chloroplastic × 1 (P08197) Photosystem I reaction center subunit XI, chloroplastic × 1 (A8IL32) CHLOROPHYLL A × 91 PHYLLOQUINONE × 2 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 3 BETA-CAROTENE × 15 IRON/SULFUR CLUSTER × 3 DODECYL-ALPHA-D-MALTOSIDE × 3 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 5 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 1 (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL × 2 HEME C × 1 water × 8 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSAF_CHLRE
Isoform —
PDB entities 9
Chains and sequence ranges Author chain F; PDBConstruct 1–165; UniProt 63–227

Photosystem I reaction center subunit XI, chloroplastic

OrganismNot specified

UniProt A8IL32

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 10 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P12154) Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P09144) Photosystem I iron-sulfur center × 1 (Q00914) Photosystem I reaction center subunit II, chloroplastic × 1 (Q39615) Photosystem I reaction center subunit IV, chloroplastic × 1 (P12352) Photosystem I reaction center subunit VIII × 1 (A8IFG7) Photosystem I reaction center subunit IX × 1 (P59777) Cytochrome c6, chloroplastic × 1 (P08197) Photosystem I reaction center subunit III, chloroplastic × 1 (P12356) CHLOROPHYLL A × 91 PHYLLOQUINONE × 2 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 3 BETA-CAROTENE × 15 IRON/SULFUR CLUSTER × 3 DODECYL-ALPHA-D-MALTOSIDE × 3 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 5 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 1 (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL × 2 HEME C × 1 water × 8 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A8IL32_CHLRE
Isoform —
PDB entities 10
Chains and sequence ranges Author chain L; PDBConstruct 1–138; UniProt 53–190

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id9se7
Deposition date deposition_date2025-08-15
Structure title titleStructure of Cytochrome C6 bound Photosystem I from Chlamydomonas reinhardtii at 2.07 A resolution
Keywords keywordsCytochrome C6, Photosystem I, Chlamydomonas reinhardtii, CryoEM, PHOTOSYNTHESIS; PHOTOSYNTHESIS
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

9se7__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

9se7__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

9se7__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)41.69 Å
Rg (electron density)40.33 Å
Total Rg40.92 Å
Atom count24048
Residues2218
Excluded volume449560 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 9se7__assembly_1__model_1 decameric (10) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (21)

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7. Citations (1)