5fmf

the P-lobe of RNA polymerase II pre-initiation complex

Method: ELECTRON MICROSCOPY
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1. 蛋白身份与相关结构 Protein Identity & Related Structures

DNA REPAIR HELICASE RAD25, SSL2

物种未注明

UniProt Q00578

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–DNA 异源复合物 蛋白 25 DNA 2 TRANSCRIPTION ELONGATION FACTOR S-II, DST1 × 1 (P07273) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 × 1 (P04050) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 × 1 (P08518) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 × 1 (P16370) RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 × 1 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5 × 1 (P20434) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6 × 1 (P20435) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7 × 1 (P34087) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8 × 1 (P20436) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9 × 1 (P27999) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10 × 1 (P22139) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11 × 1 (P38902) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12 × 1 (P40422) RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1 × 1 NON-TEMPLATE STRAND DNA × 1 TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2 × 1 (P32774) TRANSCRIPTION INITIATION FACTOR IIB, SUA7 × 1 (P29055) TATA-BOX-BINDING PROTEIN, TBP × 1 (P13393) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1 × 1 (P36100) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2 × 1 (P36145) TEMPLATE STRAND DNA × 1 RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1 × 1 TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2 × 1 (P41896) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2 × 1 (Q02939) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5 × 1 (Q3E7C1) DNA REPAIR HELICASE RAD3 × 1 (P06839) MAGNESIUM ION × 2 ZINC ION × 9 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 RAD25_YEAST
Isoform —
PDB实体 1
链与序列区间 作者链 1; PDB构建体 1–492; UniProt 294–785

TRANSCRIPTION ELONGATION FACTOR S-II, DST1

物种未注明

UniProt P07273

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–DNA 异源复合物 蛋白 25 DNA 2 DNA REPAIR HELICASE RAD25, SSL2 × 1 (Q00578) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 × 1 (P04050) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 × 1 (P08518) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 × 1 (P16370) RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 × 1 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5 × 1 (P20434) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6 × 1 (P20435) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7 × 1 (P34087) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8 × 1 (P20436) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9 × 1 (P27999) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10 × 1 (P22139) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11 × 1 (P38902) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12 × 1 (P40422) RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1 × 1 NON-TEMPLATE STRAND DNA × 1 TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2 × 1 (P32774) TRANSCRIPTION INITIATION FACTOR IIB, SUA7 × 1 (P29055) TATA-BOX-BINDING PROTEIN, TBP × 1 (P13393) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1 × 1 (P36100) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2 × 1 (P36145) TEMPLATE STRAND DNA × 1 RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1 × 1 TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2 × 1 (P41896) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2 × 1 (Q02939) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5 × 1 (Q3E7C1) DNA REPAIR HELICASE RAD3 × 1 (P06839) MAGNESIUM ION × 2 ZINC ION × 9 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 TFS2_YEAST
Isoform —
PDB实体 2
链与序列区间 作者链 2; PDB构建体 1–174; UniProt 136–309

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1

物种未注明

UniProt P04050

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–DNA 异源复合物 蛋白 25 DNA 2 DNA REPAIR HELICASE RAD25, SSL2 × 1 (Q00578) TRANSCRIPTION ELONGATION FACTOR S-II, DST1 × 1 (P07273) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 × 1 (P08518) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 × 1 (P16370) RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 × 1 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5 × 1 (P20434) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6 × 1 (P20435) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7 × 1 (P34087) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8 × 1 (P20436) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9 × 1 (P27999) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10 × 1 (P22139) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11 × 1 (P38902) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12 × 1 (P40422) RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1 × 1 NON-TEMPLATE STRAND DNA × 1 TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2 × 1 (P32774) TRANSCRIPTION INITIATION FACTOR IIB, SUA7 × 1 (P29055) TATA-BOX-BINDING PROTEIN, TBP × 1 (P13393) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1 × 1 (P36100) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2 × 1 (P36145) TEMPLATE STRAND DNA × 1 RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1 × 1 TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2 × 1 (P41896) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2 × 1 (Q02939) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5 × 1 (Q3E7C1) DNA REPAIR HELICASE RAD3 × 1 (P06839) MAGNESIUM ION × 2 ZINC ION × 9 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 RPB1_YEAST
Isoform —
PDB实体 3
链与序列区间 作者链 A; PDB构建体 1–1733; UniProt 1–1733

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2

物种未注明

UniProt P08518

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–DNA 异源复合物 蛋白 25 DNA 2 DNA REPAIR HELICASE RAD25, SSL2 × 1 (Q00578) TRANSCRIPTION ELONGATION FACTOR S-II, DST1 × 1 (P07273) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 × 1 (P04050) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 × 1 (P16370) RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 × 1 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5 × 1 (P20434) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6 × 1 (P20435) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7 × 1 (P34087) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8 × 1 (P20436) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9 × 1 (P27999) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10 × 1 (P22139) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11 × 1 (P38902) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12 × 1 (P40422) RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1 × 1 NON-TEMPLATE STRAND DNA × 1 TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2 × 1 (P32774) TRANSCRIPTION INITIATION FACTOR IIB, SUA7 × 1 (P29055) TATA-BOX-BINDING PROTEIN, TBP × 1 (P13393) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1 × 1 (P36100) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2 × 1 (P36145) TEMPLATE STRAND DNA × 1 RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1 × 1 TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2 × 1 (P41896) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2 × 1 (Q02939) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5 × 1 (Q3E7C1) DNA REPAIR HELICASE RAD3 × 1 (P06839) MAGNESIUM ION × 2 ZINC ION × 9 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 RPB2_YEAST
Isoform —
PDB实体 4
链与序列区间 作者链 B; PDB构建体 1–1224; UniProt 1–1224

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3

物种未注明

UniProt P16370

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–DNA 异源复合物 蛋白 25 DNA 2 DNA REPAIR HELICASE RAD25, SSL2 × 1 (Q00578) TRANSCRIPTION ELONGATION FACTOR S-II, DST1 × 1 (P07273) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 × 1 (P04050) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 × 1 (P08518) RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 × 1 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5 × 1 (P20434) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6 × 1 (P20435) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7 × 1 (P34087) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8 × 1 (P20436) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9 × 1 (P27999) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10 × 1 (P22139) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11 × 1 (P38902) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12 × 1 (P40422) RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1 × 1 NON-TEMPLATE STRAND DNA × 1 TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2 × 1 (P32774) TRANSCRIPTION INITIATION FACTOR IIB, SUA7 × 1 (P29055) TATA-BOX-BINDING PROTEIN, TBP × 1 (P13393) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1 × 1 (P36100) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2 × 1 (P36145) TEMPLATE STRAND DNA × 1 RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1 × 1 TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2 × 1 (P41896) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2 × 1 (Q02939) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5 × 1 (Q3E7C1) DNA REPAIR HELICASE RAD3 × 1 (P06839) MAGNESIUM ION × 2 ZINC ION × 9 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 RPB3_YEAST
Isoform —
PDB实体 5
链与序列区间 作者链 C; PDB构建体 1–266; UniProt 3–268

DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5

物种未注明

UniProt P20434

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–DNA 异源复合物 蛋白 25 DNA 2 DNA REPAIR HELICASE RAD25, SSL2 × 1 (Q00578) TRANSCRIPTION ELONGATION FACTOR S-II, DST1 × 1 (P07273) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 × 1 (P04050) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 × 1 (P08518) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 × 1 (P16370) RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 × 1 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6 × 1 (P20435) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7 × 1 (P34087) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8 × 1 (P20436) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9 × 1 (P27999) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10 × 1 (P22139) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11 × 1 (P38902) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12 × 1 (P40422) RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1 × 1 NON-TEMPLATE STRAND DNA × 1 TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2 × 1 (P32774) TRANSCRIPTION INITIATION FACTOR IIB, SUA7 × 1 (P29055) TATA-BOX-BINDING PROTEIN, TBP × 1 (P13393) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1 × 1 (P36100) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2 × 1 (P36145) TEMPLATE STRAND DNA × 1 RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1 × 1 TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2 × 1 (P41896) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2 × 1 (Q02939) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5 × 1 (Q3E7C1) DNA REPAIR HELICASE RAD3 × 1 (P06839) MAGNESIUM ION × 2 ZINC ION × 9 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 RPAB1_YEAST
Isoform —
PDB实体 7
链与序列区间 作者链 E; PDB构建体 1–214; UniProt 2–215

DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6

物种未注明

UniProt P20435

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–DNA 异源复合物 蛋白 25 DNA 2 DNA REPAIR HELICASE RAD25, SSL2 × 1 (Q00578) TRANSCRIPTION ELONGATION FACTOR S-II, DST1 × 1 (P07273) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 × 1 (P04050) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 × 1 (P08518) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 × 1 (P16370) RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 × 1 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5 × 1 (P20434) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7 × 1 (P34087) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8 × 1 (P20436) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9 × 1 (P27999) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10 × 1 (P22139) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11 × 1 (P38902) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12 × 1 (P40422) RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1 × 1 NON-TEMPLATE STRAND DNA × 1 TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2 × 1 (P32774) TRANSCRIPTION INITIATION FACTOR IIB, SUA7 × 1 (P29055) TATA-BOX-BINDING PROTEIN, TBP × 1 (P13393) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1 × 1 (P36100) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2 × 1 (P36145) TEMPLATE STRAND DNA × 1 RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1 × 1 TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2 × 1 (P41896) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2 × 1 (Q02939) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5 × 1 (Q3E7C1) DNA REPAIR HELICASE RAD3 × 1 (P06839) MAGNESIUM ION × 2 ZINC ION × 9 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 RPAB2_YEAST
Isoform —
PDB实体 8
链与序列区间 作者链 F; PDB构建体 1–84; UniProt 72–155

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7

物种未注明

UniProt P34087

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–DNA 异源复合物 蛋白 25 DNA 2 DNA REPAIR HELICASE RAD25, SSL2 × 1 (Q00578) TRANSCRIPTION ELONGATION FACTOR S-II, DST1 × 1 (P07273) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 × 1 (P04050) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 × 1 (P08518) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 × 1 (P16370) RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 × 1 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5 × 1 (P20434) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6 × 1 (P20435) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8 × 1 (P20436) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9 × 1 (P27999) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10 × 1 (P22139) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11 × 1 (P38902) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12 × 1 (P40422) RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1 × 1 NON-TEMPLATE STRAND DNA × 1 TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2 × 1 (P32774) TRANSCRIPTION INITIATION FACTOR IIB, SUA7 × 1 (P29055) TATA-BOX-BINDING PROTEIN, TBP × 1 (P13393) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1 × 1 (P36100) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2 × 1 (P36145) TEMPLATE STRAND DNA × 1 RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1 × 1 TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2 × 1 (P41896) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2 × 1 (Q02939) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5 × 1 (Q3E7C1) DNA REPAIR HELICASE RAD3 × 1 (P06839) MAGNESIUM ION × 2 ZINC ION × 9 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 RPB7_YEAST
Isoform —
PDB实体 9
链与序列区间 作者链 G; PDB构建体 1–171; UniProt 1–171

DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8

物种未注明

UniProt P20436

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–DNA 异源复合物 蛋白 25 DNA 2 DNA REPAIR HELICASE RAD25, SSL2 × 1 (Q00578) TRANSCRIPTION ELONGATION FACTOR S-II, DST1 × 1 (P07273) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 × 1 (P04050) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 × 1 (P08518) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 × 1 (P16370) RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 × 1 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5 × 1 (P20434) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6 × 1 (P20435) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7 × 1 (P34087) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9 × 1 (P27999) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10 × 1 (P22139) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11 × 1 (P38902) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12 × 1 (P40422) RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1 × 1 NON-TEMPLATE STRAND DNA × 1 TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2 × 1 (P32774) TRANSCRIPTION INITIATION FACTOR IIB, SUA7 × 1 (P29055) TATA-BOX-BINDING PROTEIN, TBP × 1 (P13393) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1 × 1 (P36100) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2 × 1 (P36145) TEMPLATE STRAND DNA × 1 RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1 × 1 TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2 × 1 (P41896) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2 × 1 (Q02939) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5 × 1 (Q3E7C1) DNA REPAIR HELICASE RAD3 × 1 (P06839) MAGNESIUM ION × 2 ZINC ION × 9 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 RPAB3_YEAST
Isoform —
PDB实体 10
链与序列区间 作者链 H; PDB构建体 1–146; UniProt 1–146

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9

物种未注明

UniProt P27999

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–DNA 异源复合物 蛋白 25 DNA 2 DNA REPAIR HELICASE RAD25, SSL2 × 1 (Q00578) TRANSCRIPTION ELONGATION FACTOR S-II, DST1 × 1 (P07273) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 × 1 (P04050) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 × 1 (P08518) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 × 1 (P16370) RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 × 1 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5 × 1 (P20434) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6 × 1 (P20435) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7 × 1 (P34087) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8 × 1 (P20436) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10 × 1 (P22139) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11 × 1 (P38902) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12 × 1 (P40422) RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1 × 1 NON-TEMPLATE STRAND DNA × 1 TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2 × 1 (P32774) TRANSCRIPTION INITIATION FACTOR IIB, SUA7 × 1 (P29055) TATA-BOX-BINDING PROTEIN, TBP × 1 (P13393) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1 × 1 (P36100) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2 × 1 (P36145) TEMPLATE STRAND DNA × 1 RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1 × 1 TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2 × 1 (P41896) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2 × 1 (Q02939) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5 × 1 (Q3E7C1) DNA REPAIR HELICASE RAD3 × 1 (P06839) MAGNESIUM ION × 2 ZINC ION × 9 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 RPB9_YEAST
Isoform —
PDB实体 11
链与序列区间 作者链 I; PDB构建体 1–119; UniProt 2–120

DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10

物种未注明

UniProt P22139

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–DNA 异源复合物 蛋白 25 DNA 2 DNA REPAIR HELICASE RAD25, SSL2 × 1 (Q00578) TRANSCRIPTION ELONGATION FACTOR S-II, DST1 × 1 (P07273) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 × 1 (P04050) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 × 1 (P08518) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 × 1 (P16370) RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 × 1 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5 × 1 (P20434) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6 × 1 (P20435) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7 × 1 (P34087) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8 × 1 (P20436) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9 × 1 (P27999) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11 × 1 (P38902) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12 × 1 (P40422) RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1 × 1 NON-TEMPLATE STRAND DNA × 1 TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2 × 1 (P32774) TRANSCRIPTION INITIATION FACTOR IIB, SUA7 × 1 (P29055) TATA-BOX-BINDING PROTEIN, TBP × 1 (P13393) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1 × 1 (P36100) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2 × 1 (P36145) TEMPLATE STRAND DNA × 1 RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1 × 1 TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2 × 1 (P41896) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2 × 1 (Q02939) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5 × 1 (Q3E7C1) DNA REPAIR HELICASE RAD3 × 1 (P06839) MAGNESIUM ION × 2 ZINC ION × 9 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 RPAB5_YEAST
Isoform —
PDB实体 12
链与序列区间 作者链 J; PDB构建体 1–65; UniProt 1–65

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11

物种未注明

UniProt P38902

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–DNA 异源复合物 蛋白 25 DNA 2 DNA REPAIR HELICASE RAD25, SSL2 × 1 (Q00578) TRANSCRIPTION ELONGATION FACTOR S-II, DST1 × 1 (P07273) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 × 1 (P04050) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 × 1 (P08518) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 × 1 (P16370) RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 × 1 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5 × 1 (P20434) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6 × 1 (P20435) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7 × 1 (P34087) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8 × 1 (P20436) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9 × 1 (P27999) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10 × 1 (P22139) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12 × 1 (P40422) RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1 × 1 NON-TEMPLATE STRAND DNA × 1 TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2 × 1 (P32774) TRANSCRIPTION INITIATION FACTOR IIB, SUA7 × 1 (P29055) TATA-BOX-BINDING PROTEIN, TBP × 1 (P13393) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1 × 1 (P36100) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2 × 1 (P36145) TEMPLATE STRAND DNA × 1 RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1 × 1 TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2 × 1 (P41896) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2 × 1 (Q02939) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5 × 1 (Q3E7C1) DNA REPAIR HELICASE RAD3 × 1 (P06839) MAGNESIUM ION × 2 ZINC ION × 9 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 RPB11_YEAST
Isoform —
PDB实体 13
链与序列区间 作者链 K; PDB构建体 1–115; UniProt 1–115

DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12

物种未注明

UniProt P40422

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–DNA 异源复合物 蛋白 25 DNA 2 DNA REPAIR HELICASE RAD25, SSL2 × 1 (Q00578) TRANSCRIPTION ELONGATION FACTOR S-II, DST1 × 1 (P07273) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 × 1 (P04050) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 × 1 (P08518) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 × 1 (P16370) RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 × 1 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5 × 1 (P20434) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6 × 1 (P20435) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7 × 1 (P34087) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8 × 1 (P20436) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9 × 1 (P27999) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10 × 1 (P22139) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11 × 1 (P38902) RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1 × 1 NON-TEMPLATE STRAND DNA × 1 TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2 × 1 (P32774) TRANSCRIPTION INITIATION FACTOR IIB, SUA7 × 1 (P29055) TATA-BOX-BINDING PROTEIN, TBP × 1 (P13393) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1 × 1 (P36100) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2 × 1 (P36145) TEMPLATE STRAND DNA × 1 RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1 × 1 TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2 × 1 (P41896) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2 × 1 (Q02939) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5 × 1 (Q3E7C1) DNA REPAIR HELICASE RAD3 × 1 (P06839) MAGNESIUM ION × 2 ZINC ION × 9 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 RPAB4_YEAST
Isoform —
PDB实体 14
链与序列区间 作者链 L; PDB构建体 1–46; UniProt 25–70

TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2

物种未注明

UniProt P32774

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–DNA 异源复合物 蛋白 25 DNA 2 DNA REPAIR HELICASE RAD25, SSL2 × 1 (Q00578) TRANSCRIPTION ELONGATION FACTOR S-II, DST1 × 1 (P07273) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 × 1 (P04050) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 × 1 (P08518) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 × 1 (P16370) RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 × 1 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5 × 1 (P20434) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6 × 1 (P20435) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7 × 1 (P34087) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8 × 1 (P20436) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9 × 1 (P27999) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10 × 1 (P22139) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11 × 1 (P38902) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12 × 1 (P40422) RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1 × 1 NON-TEMPLATE STRAND DNA × 1 TRANSCRIPTION INITIATION FACTOR IIB, SUA7 × 1 (P29055) TATA-BOX-BINDING PROTEIN, TBP × 1 (P13393) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1 × 1 (P36100) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2 × 1 (P36145) TEMPLATE STRAND DNA × 1 RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1 × 1 TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2 × 1 (P41896) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2 × 1 (Q02939) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5 × 1 (Q3E7C1) DNA REPAIR HELICASE RAD3 × 1 (P06839) MAGNESIUM ION × 2 ZINC ION × 9 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 T2AG_YEAST
Isoform —
PDB实体 17
链与序列区间 作者链 O; PDB构建体 1–122; UniProt 1–122

TRANSCRIPTION INITIATION FACTOR IIB, SUA7

物种未注明

UniProt P29055

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–DNA 异源复合物 蛋白 25 DNA 2 DNA REPAIR HELICASE RAD25, SSL2 × 1 (Q00578) TRANSCRIPTION ELONGATION FACTOR S-II, DST1 × 1 (P07273) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 × 1 (P04050) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 × 1 (P08518) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 × 1 (P16370) RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 × 1 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5 × 1 (P20434) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6 × 1 (P20435) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7 × 1 (P34087) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8 × 1 (P20436) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9 × 1 (P27999) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10 × 1 (P22139) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11 × 1 (P38902) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12 × 1 (P40422) RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1 × 1 NON-TEMPLATE STRAND DNA × 1 TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2 × 1 (P32774) TATA-BOX-BINDING PROTEIN, TBP × 1 (P13393) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1 × 1 (P36100) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2 × 1 (P36145) TEMPLATE STRAND DNA × 1 RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1 × 1 TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2 × 1 (P41896) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2 × 1 (Q02939) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5 × 1 (Q3E7C1) DNA REPAIR HELICASE RAD3 × 1 (P06839) MAGNESIUM ION × 2 ZINC ION × 9 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 TF2B_YEAST
Isoform —
PDB实体 18
链与序列区间 作者链 P; PDB构建体 1–345; UniProt 1–345

TATA-BOX-BINDING PROTEIN, TBP

物种未注明

UniProt P13393

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–DNA 异源复合物 蛋白 25 DNA 2 DNA REPAIR HELICASE RAD25, SSL2 × 1 (Q00578) TRANSCRIPTION ELONGATION FACTOR S-II, DST1 × 1 (P07273) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 × 1 (P04050) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 × 1 (P08518) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 × 1 (P16370) RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 × 1 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5 × 1 (P20434) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6 × 1 (P20435) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7 × 1 (P34087) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8 × 1 (P20436) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9 × 1 (P27999) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10 × 1 (P22139) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11 × 1 (P38902) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12 × 1 (P40422) RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1 × 1 NON-TEMPLATE STRAND DNA × 1 TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2 × 1 (P32774) TRANSCRIPTION INITIATION FACTOR IIB, SUA7 × 1 (P29055) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1 × 1 (P36100) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2 × 1 (P36145) TEMPLATE STRAND DNA × 1 RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1 × 1 TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2 × 1 (P41896) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2 × 1 (Q02939) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5 × 1 (Q3E7C1) DNA REPAIR HELICASE RAD3 × 1 (P06839) MAGNESIUM ION × 2 ZINC ION × 9 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 TBP_YEAST
Isoform —
PDB实体 19
链与序列区间 作者链 Q; PDB构建体 1–180; UniProt 61–240

TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1

物种未注明

UniProt P36100

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–DNA 异源复合物 蛋白 25 DNA 2 DNA REPAIR HELICASE RAD25, SSL2 × 1 (Q00578) TRANSCRIPTION ELONGATION FACTOR S-II, DST1 × 1 (P07273) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 × 1 (P04050) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 × 1 (P08518) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 × 1 (P16370) RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 × 1 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5 × 1 (P20434) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6 × 1 (P20435) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7 × 1 (P34087) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8 × 1 (P20436) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9 × 1 (P27999) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10 × 1 (P22139) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11 × 1 (P38902) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12 × 1 (P40422) RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1 × 1 NON-TEMPLATE STRAND DNA × 1 TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2 × 1 (P32774) TRANSCRIPTION INITIATION FACTOR IIB, SUA7 × 1 (P29055) TATA-BOX-BINDING PROTEIN, TBP × 1 (P13393) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2 × 1 (P36145) TEMPLATE STRAND DNA × 1 RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1 × 1 TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2 × 1 (P41896) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2 × 1 (Q02939) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5 × 1 (Q3E7C1) DNA REPAIR HELICASE RAD3 × 1 (P06839) MAGNESIUM ION × 2 ZINC ION × 9 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 T2EA_YEAST
Isoform —
PDB实体 20
链与序列区间 作者链 R; PDB构建体 1–160; UniProt 1–160

TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2

物种未注明

UniProt P36145

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–DNA 异源复合物 蛋白 25 DNA 2 DNA REPAIR HELICASE RAD25, SSL2 × 1 (Q00578) TRANSCRIPTION ELONGATION FACTOR S-II, DST1 × 1 (P07273) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 × 1 (P04050) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 × 1 (P08518) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 × 1 (P16370) RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 × 1 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5 × 1 (P20434) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6 × 1 (P20435) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7 × 1 (P34087) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8 × 1 (P20436) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9 × 1 (P27999) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10 × 1 (P22139) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11 × 1 (P38902) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12 × 1 (P40422) RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1 × 1 NON-TEMPLATE STRAND DNA × 1 TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2 × 1 (P32774) TRANSCRIPTION INITIATION FACTOR IIB, SUA7 × 1 (P29055) TATA-BOX-BINDING PROTEIN, TBP × 1 (P13393) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1 × 1 (P36100) TEMPLATE STRAND DNA × 1 RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1 × 1 TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2 × 1 (P41896) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2 × 1 (Q02939) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5 × 1 (Q3E7C1) DNA REPAIR HELICASE RAD3 × 1 (P06839) MAGNESIUM ION × 2 ZINC ION × 9 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 T2EB_YEAST
Isoform —
PDB实体 21
链与序列区间 作者链 S; PDB构建体 1–123; UniProt 125–247

TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2

物种未注明

UniProt P41896

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–DNA 异源复合物 蛋白 25 DNA 2 DNA REPAIR HELICASE RAD25, SSL2 × 1 (Q00578) TRANSCRIPTION ELONGATION FACTOR S-II, DST1 × 1 (P07273) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 × 1 (P04050) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 × 1 (P08518) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 × 1 (P16370) RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 × 1 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5 × 1 (P20434) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6 × 1 (P20435) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7 × 1 (P34087) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8 × 1 (P20436) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9 × 1 (P27999) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10 × 1 (P22139) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11 × 1 (P38902) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12 × 1 (P40422) RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1 × 1 NON-TEMPLATE STRAND DNA × 1 TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2 × 1 (P32774) TRANSCRIPTION INITIATION FACTOR IIB, SUA7 × 1 (P29055) TATA-BOX-BINDING PROTEIN, TBP × 1 (P13393) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1 × 1 (P36100) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2 × 1 (P36145) TEMPLATE STRAND DNA × 1 RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1 × 1 RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2 × 1 (Q02939) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5 × 1 (Q3E7C1) DNA REPAIR HELICASE RAD3 × 1 (P06839) MAGNESIUM ION × 2 ZINC ION × 9 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 T2FB_YEAST
Isoform —
PDB实体 24
链与序列区间 作者链 V; PDB构建体 1–89; UniProt 54–142

RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2

物种未注明

UniProt Q02939

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–DNA 异源复合物 蛋白 25 DNA 2 DNA REPAIR HELICASE RAD25, SSL2 × 1 (Q00578) TRANSCRIPTION ELONGATION FACTOR S-II, DST1 × 1 (P07273) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 × 1 (P04050) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 × 1 (P08518) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 × 1 (P16370) RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 × 1 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5 × 1 (P20434) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6 × 1 (P20435) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7 × 1 (P34087) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8 × 1 (P20436) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9 × 1 (P27999) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10 × 1 (P22139) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11 × 1 (P38902) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12 × 1 (P40422) RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1 × 1 NON-TEMPLATE STRAND DNA × 1 TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2 × 1 (P32774) TRANSCRIPTION INITIATION FACTOR IIB, SUA7 × 1 (P29055) TATA-BOX-BINDING PROTEIN, TBP × 1 (P13393) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1 × 1 (P36100) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2 × 1 (P36145) TEMPLATE STRAND DNA × 1 RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1 × 1 TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2 × 1 (P41896) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5 × 1 (Q3E7C1) DNA REPAIR HELICASE RAD3 × 1 (P06839) MAGNESIUM ION × 2 ZINC ION × 9 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 TFB2_YEAST
Isoform —
PDB实体 25
链与序列区间 作者链 W; PDB构建体 1–62; UniProt 447–508

RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5

物种未注明

UniProt Q3E7C1

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–DNA 异源复合物 蛋白 25 DNA 2 DNA REPAIR HELICASE RAD25, SSL2 × 1 (Q00578) TRANSCRIPTION ELONGATION FACTOR S-II, DST1 × 1 (P07273) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 × 1 (P04050) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 × 1 (P08518) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 × 1 (P16370) RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 × 1 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5 × 1 (P20434) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6 × 1 (P20435) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7 × 1 (P34087) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8 × 1 (P20436) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9 × 1 (P27999) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10 × 1 (P22139) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11 × 1 (P38902) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12 × 1 (P40422) RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1 × 1 NON-TEMPLATE STRAND DNA × 1 TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2 × 1 (P32774) TRANSCRIPTION INITIATION FACTOR IIB, SUA7 × 1 (P29055) TATA-BOX-BINDING PROTEIN, TBP × 1 (P13393) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1 × 1 (P36100) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2 × 1 (P36145) TEMPLATE STRAND DNA × 1 RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1 × 1 TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2 × 1 (P41896) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2 × 1 (Q02939) DNA REPAIR HELICASE RAD3 × 1 (P06839) MAGNESIUM ION × 2 ZINC ION × 9 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 TFB5_YEAST
Isoform —
PDB实体 26
链与序列区间 作者链 X; PDB构建体 1–63; UniProt 2–64

DNA REPAIR HELICASE RAD3

物种未注明

UniProt P06839

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–DNA 异源复合物 蛋白 25 DNA 2 DNA REPAIR HELICASE RAD25, SSL2 × 1 (Q00578) TRANSCRIPTION ELONGATION FACTOR S-II, DST1 × 1 (P07273) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 × 1 (P04050) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 × 1 (P08518) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 × 1 (P16370) RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 × 1 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5 × 1 (P20434) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6 × 1 (P20435) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7 × 1 (P34087) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8 × 1 (P20436) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9 × 1 (P27999) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10 × 1 (P22139) DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11 × 1 (P38902) DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12 × 1 (P40422) RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1 × 1 NON-TEMPLATE STRAND DNA × 1 TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2 × 1 (P32774) TRANSCRIPTION INITIATION FACTOR IIB, SUA7 × 1 (P29055) TATA-BOX-BINDING PROTEIN, TBP × 1 (P13393) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1 × 1 (P36100) TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2 × 1 (P36145) TEMPLATE STRAND DNA × 1 RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1 × 1 TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2 × 1 (P41896) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2 × 1 (Q02939) RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5 × 1 (Q3E7C1) MAGNESIUM ION × 2 ZINC ION × 9 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 RAD3_YEAST
Isoform —
PDB实体 27
链与序列区间 作者链 Y; PDB构建体 1–778; UniProt 1–778

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

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2. 结构基本信息 2. Structure Basics

条目编号 entry_id5fmf
沉积日期 deposition_date2015-11-03
结构标题 titlethe P-lobe of RNA polymerase II pre-initiation complex
关键词 keywordsTRANSCRIPTION, PRE-INITIATION COMPLEX, RNA POLYMERASE, TFIIE, TFIIH, TFIIB, TBP, TFIIF, PROTEIN; TRANSCRIPTION
实验方法 methodELECTRON MICROSCOPY
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3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

5fmf__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

5fmf__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

5fmf__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)70.92 Å
Rg(电子密度)70.93 Å
总 Rg71.36 Å
原子数55259
残基数6612
排除体积980060 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 5fmf__assembly_1__model_1 27-meric (27) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合物信息 Entities & Polymers (29)

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7. 引用文献 (1)