8fed

Structure of Mce1-LucB complex from Mycobacterium smegmatis (Map1)

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Virulence factor Mce family protein

OrganismNot specified

UniProt A0QNR2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 11 Virulence factor Mce family protein × 1 (A0QNR3) MCE-family protein MCE1c × 1 (I7G2J2) Virulence factor mce family protein × 1 (A0QNR5) Virulence factor Mce family protein × 1 (A0QNR6) Mce-family protein mce1f × 1 (A0QNR7) ABC transporter, ATP-binding protein,Green fluorescent protein chimera × 2 (A0QS64,P42212) Conserved hypothetical integral membrane protein Yrbe1a × 1 (I7F4Q4) ABC-transporter integral membrane protein × 1 (A0QNR1) Transmembrane protein × 1 (A0QWR2) UNKNOWN LIGAND × 31 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0QNR2_MYCS2
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–409; UniProt 1–409

Virulence factor Mce family protein

OrganismNot specified

UniProt A0QNR3

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 11 Virulence factor Mce family protein × 1 (A0QNR2) MCE-family protein MCE1c × 1 (I7G2J2) Virulence factor mce family protein × 1 (A0QNR5) Virulence factor Mce family protein × 1 (A0QNR6) Mce-family protein mce1f × 1 (A0QNR7) ABC transporter, ATP-binding protein,Green fluorescent protein chimera × 2 (A0QS64,P42212) Conserved hypothetical integral membrane protein Yrbe1a × 1 (I7F4Q4) ABC-transporter integral membrane protein × 1 (A0QNR1) Transmembrane protein × 1 (A0QWR2) UNKNOWN LIGAND × 31 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0QNR3_MYCS2
Isoform —
PDB entities 2
Chains and sequence ranges Author chain B; PDBConstruct 1–343; UniProt 1–343

MCE-family protein MCE1c

OrganismNot specified

UniProt I7G2J2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 11 Virulence factor Mce family protein × 1 (A0QNR2) Virulence factor Mce family protein × 1 (A0QNR3) Virulence factor mce family protein × 1 (A0QNR5) Virulence factor Mce family protein × 1 (A0QNR6) Mce-family protein mce1f × 1 (A0QNR7) ABC transporter, ATP-binding protein,Green fluorescent protein chimera × 2 (A0QS64,P42212) Conserved hypothetical integral membrane protein Yrbe1a × 1 (I7F4Q4) ABC-transporter integral membrane protein × 1 (A0QNR1) Transmembrane protein × 1 (A0QWR2) UNKNOWN LIGAND × 31 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name I7G2J2_MYCS2
Isoform —
PDB entities 3
Chains and sequence ranges Author chain C; PDBConstruct 1–524; UniProt 1–524

Virulence factor mce family protein

OrganismNot specified

UniProt A0QNR5

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 11 Virulence factor Mce family protein × 1 (A0QNR2) Virulence factor Mce family protein × 1 (A0QNR3) MCE-family protein MCE1c × 1 (I7G2J2) Virulence factor Mce family protein × 1 (A0QNR6) Mce-family protein mce1f × 1 (A0QNR7) ABC transporter, ATP-binding protein,Green fluorescent protein chimera × 2 (A0QS64,P42212) Conserved hypothetical integral membrane protein Yrbe1a × 1 (I7F4Q4) ABC-transporter integral membrane protein × 1 (A0QNR1) Transmembrane protein × 1 (A0QWR2) UNKNOWN LIGAND × 31 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0QNR5_MYCS2
Isoform —
PDB entities 4
Chains and sequence ranges Author chain D; PDBConstruct 1–547; UniProt 1–547

Virulence factor Mce family protein

OrganismNot specified

UniProt A0QNR6

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 11 Virulence factor Mce family protein × 1 (A0QNR2) Virulence factor Mce family protein × 1 (A0QNR3) MCE-family protein MCE1c × 1 (I7G2J2) Virulence factor mce family protein × 1 (A0QNR5) Mce-family protein mce1f × 1 (A0QNR7) ABC transporter, ATP-binding protein,Green fluorescent protein chimera × 2 (A0QS64,P42212) Conserved hypothetical integral membrane protein Yrbe1a × 1 (I7F4Q4) ABC-transporter integral membrane protein × 1 (A0QNR1) Transmembrane protein × 1 (A0QWR2) UNKNOWN LIGAND × 31 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0QNR6_MYCS2
Isoform —
PDB entities 5
Chains and sequence ranges Author chain E; PDBConstruct 1–390; UniProt 1–390

Mce-family protein mce1f

OrganismNot specified

UniProt A0QNR7

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 11 Virulence factor Mce family protein × 1 (A0QNR2) Virulence factor Mce family protein × 1 (A0QNR3) MCE-family protein MCE1c × 1 (I7G2J2) Virulence factor mce family protein × 1 (A0QNR5) Virulence factor Mce family protein × 1 (A0QNR6) ABC transporter, ATP-binding protein,Green fluorescent protein chimera × 2 (A0QS64,P42212) Conserved hypothetical integral membrane protein Yrbe1a × 1 (I7F4Q4) ABC-transporter integral membrane protein × 1 (A0QNR1) Transmembrane protein × 1 (A0QWR2) UNKNOWN LIGAND × 31 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0QNR7_MYCS2
Isoform —
PDB entities 6
Chains and sequence ranges Author chain F; PDBConstruct 1–518; UniProt 1–518

ABC transporter, ATP-binding protein,Green fluorescent protein chimera

OrganismNot specified

UniProt A0QS64

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 11 Virulence factor Mce family protein × 1 (A0QNR2) Virulence factor Mce family protein × 1 (A0QNR3) MCE-family protein MCE1c × 1 (I7G2J2) Virulence factor mce family protein × 1 (A0QNR5) Virulence factor Mce family protein × 1 (A0QNR6) Mce-family protein mce1f × 1 (A0QNR7) Conserved hypothetical integral membrane protein Yrbe1a × 1 (I7F4Q4) ABC-transporter integral membrane protein × 1 (A0QNR1) Transmembrane protein × 1 (A0QWR2) UNKNOWN LIGAND × 31 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0QS64_MYCS2
Isoform —
PDB entities 7
Chains and sequence ranges Author chain G; PDBConstruct 1–360; UniProt 1–360 Author chain H; PDBConstruct 1–360; UniProt 1–360

ABC transporter, ATP-binding protein,Green fluorescent protein chimera

OrganismNot specified

UniProt P42212

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 11 Virulence factor Mce family protein × 1 (A0QNR2) Virulence factor Mce family protein × 1 (A0QNR3) MCE-family protein MCE1c × 1 (I7G2J2) Virulence factor mce family protein × 1 (A0QNR5) Virulence factor Mce family protein × 1 (A0QNR6) Mce-family protein mce1f × 1 (A0QNR7) Conserved hypothetical integral membrane protein Yrbe1a × 1 (I7F4Q4) ABC-transporter integral membrane protein × 1 (A0QNR1) Transmembrane protein × 1 (A0QWR2) UNKNOWN LIGAND × 31 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name GFP_AEQVI
Isoform —
PDB entities 7
Chains and sequence ranges Author chain G; PDBConstruct 424–629; UniProt 33–238 Author chain H; PDBConstruct 424–629; UniProt 33–238

Conserved hypothetical integral membrane protein Yrbe1a

OrganismNot specified

UniProt I7F4Q4

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 11 Virulence factor Mce family protein × 1 (A0QNR2) Virulence factor Mce family protein × 1 (A0QNR3) MCE-family protein MCE1c × 1 (I7G2J2) Virulence factor mce family protein × 1 (A0QNR5) Virulence factor Mce family protein × 1 (A0QNR6) Mce-family protein mce1f × 1 (A0QNR7) ABC transporter, ATP-binding protein,Green fluorescent protein chimera × 2 (A0QS64,P42212) ABC-transporter integral membrane protein × 1 (A0QNR1) Transmembrane protein × 1 (A0QWR2) UNKNOWN LIGAND × 31 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name I7F4Q4_MYCS2
Isoform —
PDB entities 8
Chains and sequence ranges Author chain I; PDBConstruct 1–266; UniProt 1–266

ABC-transporter integral membrane protein

OrganismNot specified

UniProt A0QNR1

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 11 Virulence factor Mce family protein × 1 (A0QNR2) Virulence factor Mce family protein × 1 (A0QNR3) MCE-family protein MCE1c × 1 (I7G2J2) Virulence factor mce family protein × 1 (A0QNR5) Virulence factor Mce family protein × 1 (A0QNR6) Mce-family protein mce1f × 1 (A0QNR7) ABC transporter, ATP-binding protein,Green fluorescent protein chimera × 2 (A0QS64,P42212) Conserved hypothetical integral membrane protein Yrbe1a × 1 (I7F4Q4) Transmembrane protein × 1 (A0QWR2) UNKNOWN LIGAND × 31 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0QNR1_MYCS2
Isoform —
PDB entities 9
Chains and sequence ranges Author chain J; PDBConstruct 1–289; UniProt 1–289

Transmembrane protein

OrganismNot specified

UniProt A0QWR2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 11 Virulence factor Mce family protein × 1 (A0QNR2) Virulence factor Mce family protein × 1 (A0QNR3) MCE-family protein MCE1c × 1 (I7G2J2) Virulence factor mce family protein × 1 (A0QNR5) Virulence factor Mce family protein × 1 (A0QNR6) Mce-family protein mce1f × 1 (A0QNR7) ABC transporter, ATP-binding protein,Green fluorescent protein chimera × 2 (A0QS64,P42212) Conserved hypothetical integral membrane protein Yrbe1a × 1 (I7F4Q4) ABC-transporter integral membrane protein × 1 (A0QNR1) UNKNOWN LIGAND × 31 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0QWR2_MYCS2
Isoform —
PDB entities 10
Chains and sequence ranges Author chain K; PDBConstruct 1–191; UniProt 1–191

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id8fed
Deposition date deposition_date2022-12-06
Structure title titleStructure of Mce1-LucB complex from Mycobacterium smegmatis (Map1)
Keywords keywordsMembrane protein complex, ABC transporter, Virulence factor, Lipid transport, MEMBRANE PROTEIN; MEMBRANE PROTEIN
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

8fed__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

8fed__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

8fed__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)90.34 Å
Rg (electron density)93.12 Å
Total Rg92.93 Å
Atom count26565
Residues3427
Excluded volume475690 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 8fed__assembly_1__model_1 undecameric (11) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (11)

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6. Fold Classification (SCOP + CATH) 2 domains

CATH v4.4 (2 domains)

Domain ID domain_id8fedG01
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id8fedH01
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
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7. Citations (1)