8fso

Crystal structure of integrin beta-6 tail bound to the FERM-folded talin head domain

Method: X-RAY DIFFRACTION Dmax: 106.9 Å Quality: GOOD

1. Protein Identity and Related Structures Protein Identity & Related Structures

Integrin beta-6,Talin-1

Mus musculus

UniProt P26039

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Insufficient information Monomer Protein × 1 PDB declaration: monomeric(1) Consistent with protein copy count Chain A; UniProt 1–430 Not recorded No other associated polymer X-RAY DIFFRACTION X-ray crystallization conditions:VAPOR DIFFUSION;300 K;PEG3350 20%, NaCl 0.1M, DTT 2mM Resolution 2.33 Å R-free 0.252

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

50 other PDB entries and 70 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name TLN1_MOUSE
Isoform
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 12–411; UniProt 1–430

Integrin beta-6,Talin-1

Mus musculus

UniProt Q9Z0T9

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Insufficient information Monomer Protein × 1 PDB declaration: monomeric(1) Consistent with protein copy count Chain A; UniProt 755–764 Not recorded No other associated polymer X-RAY DIFFRACTION X-ray crystallization conditions:VAPOR DIFFUSION;300 K;PEG3350 20%, NaCl 0.1M, DTT 2mM Resolution 2.33 Å R-free 0.252

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name ITB6_MOUSE
Isoform
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 2–11; UniProt 755–764

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 8fso

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 8fso
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2. Structure Basics 2. Structure Basics

Entry ID entry_id8fso
Deposition date deposition_date2023-01-10
最后修订 last_revision2024-10-16
Structure title titleCrystal structure of integrin beta-6 tail bound to the FERM-folded talin head domain
Keywords keywordsintegrin, beta-6, talin, FERM, complex, CELL ADHESION; CELL ADHESION
Experimental Method methodX-RAY DIFFRACTION

3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier27.75
Radius of gyration Rg (electron density) rg_electron27.39
Forward intensity I(0) i030523400.00
Molecular weight molecular_weight42845.0 kDa
Excluded volume excluded_volume53837 ų
Envelope volume envelope_volume71211 ų
Hydration-shell volume shell_volume23686 ų
Envelope diameter envelope_diameter110.5
Shell Rg shell_rg31.72
Envelope Rg envelope_rg28.35
Shape Rg shape_rg27.36
Total Rg total_rg28.00
Total atoms total_atoms3010
Residues n_residues378
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 −1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3

4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax106.9
Rg (real space) rg_real28.06
Rg uncertainty (real space) rg_real_error0.96
I(0) (real space) i0_real3.0520e+07
I(0) uncertainty (real space) i0_real_error4.4720e+05
Rg (reciprocal space) rg_reciprocal27.96
I(0) (reciprocal space) i0_reciprocal30520000.0000
Solution quality estimate total_estimate0.7839
Solution quality rating solution_quality GOOD a GOOD solution
P(r) peaks n_peaks2
Primary peak position r_peak_primary26.2
Skewness Skewness skewness0.594
Kurtosis Kurtosis kurtosis0.061
Angular range angular_range— – 0.2850 −1
Current regularization parameter α current_alpha0.0000
Highest regularization parameter α highest_alpha9462000.0000
Real-space data points n_real_points58
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 0.575; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.503; Smooth: 0.959

5. Crystallography and Experiment 5. Crystallography & Experiment

6. Entities and Polymers Entities & Polymers (2)

8. Citations (1)

9. Files and Curves (10)