当前蛋白身份:P38077 重新检索
本组结构的主要差异维度
构建体不同 突变/修饰不同 组装状态不同 配体/离子不同 实验方法不同 实验环境不同 结构质量指标不同

差异标签只比较当前检索结果;所有PDB和assembly原始记录仍分别保留。

相关结构差异明细

一行代表一个 PDB 条目中的一个 biological assembly;同一蛋白的多个单体会分别列出。

PDB 条目 Assembly / 聚集状态 构建体 突变与修饰 配体、离子与非聚合物 实验方法 实验环境 结构质量
2HLD Crystal structure of yeast mitochondrial F1-ATPase 提交 2006-07-06 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 9 PDB 声明:nonameric(9) 与蛋白数一致
链 G 34–311(278 aa)
未记录 MG MAGNESIUM ION × 5 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 5 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 7.3;277 K;5.5% PEG 6000, 10% glycerol, 4% methanol, 0.05M sodium acetate, 0.5mM nickel sulphate, 0.5mM AMP/PNP, 0.025 mM ADP, 2mM magnesium chloride, pH 7.3, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 2.80 Å R-free 0.244
2HLD Crystal structure of yeast mitochondrial F1-ATPase 提交 2006-07-06 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 9 PDB 声明:nonameric(9) 与蛋白数一致
链 P 34–311(278 aa)
未记录 MG MAGNESIUM ION × 5 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 5 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 7.3;277 K;5.5% PEG 6000, 10% glycerol, 4% methanol, 0.05M sodium acetate, 0.5mM nickel sulphate, 0.5mM AMP/PNP, 0.025 mM ADP, 2mM magnesium chloride, pH 7.3, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 2.80 Å R-free 0.244
2HLD Crystal structure of yeast mitochondrial F1-ATPase 提交 2006-07-06 Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 9 PDB 声明:nonameric(9) 与蛋白数一致
链 Y 34–311(278 aa)
未记录 MG MAGNESIUM ION × 5 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 5 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 7.3;277 K;5.5% PEG 6000, 10% glycerol, 4% methanol, 0.05M sodium acetate, 0.5mM nickel sulphate, 0.5mM AMP/PNP, 0.025 mM ADP, 2mM magnesium chloride, pH 7.3, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 2.80 Å R-free 0.244
2WPD The Mg.ADP inhibited state of the yeast F1c10 ATP synthase 提交 2009-08-05 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 19 PDB 声明:nonadecameric(19) 与蛋白数一致
链 G 34–311(278 aa)
未记录 ATP ADENOSINE-5'-TRIPHOSPHATE × 3 MG MAGNESIUM ION × 5 ADP ADENOSINE-5'-DIPHOSPHATE × 2 X-RAY DIFFRACTION
X-ray结晶条件 pH 7.5;0.1 M HEPES/HCL PH 7.5, 12% PEG MME 5000, 100 MM SODIUM CHLORIDE MIXED 1:1 WITH PROTEIN SOLUTION CONTAINING 0.64 MM DDM, 25 MM TRIS/HCL PH 8.0, 100 MM SODIUM CHLORIDE, 25 MM TREHALOSE, 0.5 MM EDTA, 0.02% SODIUM AZIDE, 2 MM MAGNESIUM CHLORIDE, 0.66 MM ADP, 0.1 MM DCCD, 2.5 MM DTT, 0.5 MM PMSF
分辨率 3.43 Å R-free 0.297
2XOK Refined structure of yeast F1c10 ATPase complex to 3 A resolution 提交 2010-08-18 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 19 PDB 声明:nonadecameric(19) 与蛋白数一致
链 G 1–311(311 aa)
未记录 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 5 MG MAGNESIUM ION × 5 X-RAY DIFFRACTION
X-ray结晶条件 MICROBATCH;pH 8;0.1 M TRIS/CL PH8.0, 12% PEG 6000, 150 MM NACL, 1 MM AMP-PNP, 40 MICROM ADP, 1 MM DTT, 0.02% NAN3. MIXED 1:1 WITH PROTEIN SOLUTION UNDER PARAFFIN OIL IN MICROBATCH PLATE.
分辨率 3.01 Å R-free 0.253
3FKS Yeast F1 ATPase in the absence of bound nucleotides 提交 2008-12-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 9 PDB 声明:nonameric(9) 与蛋白数一致
链 G 34–311(278 aa) 片段:UNP residues 34-311
未记录 PO4 PHOSPHATE ION × 5 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 7.3;277 K;6.25% PEG 6000, 10% Glycerol, 4% Methanol, 0.05M Sodium acetate, 0.5mM Nickel sulfate, 2 mM Sodium pyrophosphate, 2mM Magnesium chloride, pH 7.3, VAPOR DIFFUSION, SITTING DROP, temperature 277.0K
分辨率 3.59 Å R-free 0.306
3FKS Yeast F1 ATPase in the absence of bound nucleotides 提交 2008-12-17 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 9 PDB 声明:nonameric(9) 与蛋白数一致
链 P 34–311(278 aa) 片段:UNP residues 34-311
未记录 PO4 PHOSPHATE ION × 6 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 7.3;277 K;6.25% PEG 6000, 10% Glycerol, 4% Methanol, 0.05M Sodium acetate, 0.5mM Nickel sulfate, 2 mM Sodium pyrophosphate, 2mM Magnesium chloride, pH 7.3, VAPOR DIFFUSION, SITTING DROP, temperature 277.0K
分辨率 3.59 Å R-free 0.306
3FKS Yeast F1 ATPase in the absence of bound nucleotides 提交 2008-12-17 Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 9 PDB 声明:nonameric(9) 与蛋白数一致
链 Y 34–311(278 aa) 片段:UNP residues 34-311
未记录 PO4 PHOSPHATE ION × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 7.3;277 K;6.25% PEG 6000, 10% Glycerol, 4% Methanol, 0.05M Sodium acetate, 0.5mM Nickel sulfate, 2 mM Sodium pyrophosphate, 2mM Magnesium chloride, pH 7.3, VAPOR DIFFUSION, SITTING DROP, temperature 277.0K
分辨率 3.59 Å R-free 0.306
3OE7 Structure of four mutant forms of yeast f1 ATPase: gamma-I270T 提交 2010-08-12 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 9 PDB 声明:nonameric(9) 与蛋白数一致
链 G 34–311(278 aa) 片段:UNP RESIDUES 34-311
突变:I270T ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 5 MG MAGNESIUM ION × 5 X-RAY DIFFRACTION
X-ray结晶条件 pH 7.3;277 K;5.5% PEG 6000, 10% GLYCEROL, 4% METHANOL, 0.05M SODIUM ACETATE, 0.5MM NICKEL SULPHATE, 0.5MM AMP/PNP, 0.025 MM ADP, 2MM MAGNESIUM CHLORIDE, PH 7.3, VAPOR DIFFUSION SITTING DROP, TEMPERATURE 277K
分辨率 3.19 Å R-free 0.245
3OE7 Structure of four mutant forms of yeast f1 ATPase: gamma-I270T 提交 2010-08-12 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 9 PDB 声明:nonameric(9) 与蛋白数一致
链 P 34–311(278 aa) 片段:UNP RESIDUES 34-311
突变:I270T ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 5 MG MAGNESIUM ION × 5 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray结晶条件 pH 7.3;277 K;5.5% PEG 6000, 10% GLYCEROL, 4% METHANOL, 0.05M SODIUM ACETATE, 0.5MM NICKEL SULPHATE, 0.5MM AMP/PNP, 0.025 MM ADP, 2MM MAGNESIUM CHLORIDE, PH 7.3, VAPOR DIFFUSION SITTING DROP, TEMPERATURE 277K
分辨率 3.19 Å R-free 0.245
3OE7 Structure of four mutant forms of yeast f1 ATPase: gamma-I270T 提交 2010-08-12 Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 9 PDB 声明:nonameric(9) 与蛋白数一致
链 Y 34–311(278 aa) 片段:UNP RESIDUES 34-311
突变:I270T ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 5 MG MAGNESIUM ION × 5 X-RAY DIFFRACTION
X-ray结晶条件 pH 7.3;277 K;5.5% PEG 6000, 10% GLYCEROL, 4% METHANOL, 0.05M SODIUM ACETATE, 0.5MM NICKEL SULPHATE, 0.5MM AMP/PNP, 0.025 MM ADP, 2MM MAGNESIUM CHLORIDE, PH 7.3, VAPOR DIFFUSION SITTING DROP, TEMPERATURE 277K
分辨率 3.19 Å R-free 0.245
3OEE Structure of four mutant forms of yeast F1 ATPase: alpha-F405S 提交 2010-08-12 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 9 PDB 声明:nonameric(9) 与蛋白数一致
链 G 34–311(278 aa) 片段:UNP RESIDUES 34-311
未记录 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 5 MG MAGNESIUM ION × 5 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray结晶条件 pH 7.3;277 K;5.5% PEG 6000, 10% GLYCEROL, 4% METHANOL, 0.05M SODIUM ACETATE, 0.5MM NICKEL SULPHATE, 0.5MM AMP/PNP, 0.025 MM ADP, 2MM MAGNESIUM CHLORIDE, pH 7.3, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 2.74 Å R-free 0.259
3OEE Structure of four mutant forms of yeast F1 ATPase: alpha-F405S 提交 2010-08-12 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 9 PDB 声明:nonameric(9) 与蛋白数一致
链 P 34–311(278 aa) 片段:UNP RESIDUES 34-311
未记录 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 5 MG MAGNESIUM ION × 5 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray结晶条件 pH 7.3;277 K;5.5% PEG 6000, 10% GLYCEROL, 4% METHANOL, 0.05M SODIUM ACETATE, 0.5MM NICKEL SULPHATE, 0.5MM AMP/PNP, 0.025 MM ADP, 2MM MAGNESIUM CHLORIDE, pH 7.3, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 2.74 Å R-free 0.259
3OEE Structure of four mutant forms of yeast F1 ATPase: alpha-F405S 提交 2010-08-12 Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 9 PDB 声明:nonameric(9) 与蛋白数一致
链 Y 34–311(278 aa) 片段:UNP RESIDUES 34-311
未记录 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 5 MG MAGNESIUM ION × 5 X-RAY DIFFRACTION
X-ray结晶条件 pH 7.3;277 K;5.5% PEG 6000, 10% GLYCEROL, 4% METHANOL, 0.05M SODIUM ACETATE, 0.5MM NICKEL SULPHATE, 0.5MM AMP/PNP, 0.025 MM ADP, 2MM MAGNESIUM CHLORIDE, pH 7.3, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 2.74 Å R-free 0.259
3OEH Structure of four mutant forms of yeast F1 ATPase: beta-V279F 提交 2010-08-12 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 9 PDB 声明:nonameric(9) 与蛋白数一致
链 G 34–311(278 aa) 片段:UNP RESIDUES 34-311
未记录 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 5 MG MAGNESIUM ION × 5 X-RAY DIFFRACTION
X-ray结晶条件 pH 7.3;277 K;5.5% PEG 6000, 10% GLYCEROL, 4% METHANOL, 0.05M SODIUM ACETATE, 0.5MM NICKEL SULPHATE, 0.5MM AMP/PNP, 0.025 MM ADP, 2MM MAGNESIUM CHLORIDE, pH 7.3, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 3.00 Å R-free 0.270
3OEH Structure of four mutant forms of yeast F1 ATPase: beta-V279F 提交 2010-08-12 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 9 PDB 声明:nonameric(9) 与蛋白数一致
链 P 34–311(278 aa) 片段:UNP RESIDUES 34-311
未记录 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 5 MG MAGNESIUM ION × 5 X-RAY DIFFRACTION
X-ray结晶条件 pH 7.3;277 K;5.5% PEG 6000, 10% GLYCEROL, 4% METHANOL, 0.05M SODIUM ACETATE, 0.5MM NICKEL SULPHATE, 0.5MM AMP/PNP, 0.025 MM ADP, 2MM MAGNESIUM CHLORIDE, pH 7.3, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 3.00 Å R-free 0.270
3OEH Structure of four mutant forms of yeast F1 ATPase: beta-V279F 提交 2010-08-12 Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 9 PDB 声明:nonameric(9) 与蛋白数一致
链 Y 34–311(278 aa) 片段:UNP RESIDUES 34-311
未记录 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 5 MG MAGNESIUM ION × 5 X-RAY DIFFRACTION
X-ray结晶条件 pH 7.3;277 K;5.5% PEG 6000, 10% GLYCEROL, 4% METHANOL, 0.05M SODIUM ACETATE, 0.5MM NICKEL SULPHATE, 0.5MM AMP/PNP, 0.025 MM ADP, 2MM MAGNESIUM CHLORIDE, pH 7.3, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 3.00 Å R-free 0.270
3OFN Structure of four mutant forms of yeast F1 ATPase: alpha-N67I 提交 2010-08-15 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 9 PDB 声明:nonameric(9) 与蛋白数一致
链 G 34–311(278 aa) 片段:UNP RESIDUES 34-311
未记录 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 5 MG MAGNESIUM ION × 5 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 7.3;277 K;5.5% PEG 6000, 10% GLYCEROL, 4% METHANOL, 0.05M SODIUM ACETATE, 0.5MM NICKEL SULPHATE, 0.5MM AMP/PNP, 0.025 MM ADP, 2MM MAGNESIUM CHLORIDE, pH 7.3, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 3.20 Å R-free 0.276
3OFN Structure of four mutant forms of yeast F1 ATPase: alpha-N67I 提交 2010-08-15 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 9 PDB 声明:nonameric(9) 与蛋白数一致
链 P 34–311(278 aa) 片段:UNP RESIDUES 34-311
未记录 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 5 MG MAGNESIUM ION × 5 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 7.3;277 K;5.5% PEG 6000, 10% GLYCEROL, 4% METHANOL, 0.05M SODIUM ACETATE, 0.5MM NICKEL SULPHATE, 0.5MM AMP/PNP, 0.025 MM ADP, 2MM MAGNESIUM CHLORIDE, pH 7.3, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 3.20 Å R-free 0.276
3OFN Structure of four mutant forms of yeast F1 ATPase: alpha-N67I 提交 2010-08-15 Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 7 PDB 声明:heptameric(7) 与蛋白数一致
链 Y 34–311(278 aa) 片段:UNP RESIDUES 34-311
未记录 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 5 MG MAGNESIUM ION × 5 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 7.3;277 K;5.5% PEG 6000, 10% GLYCEROL, 4% METHANOL, 0.05M SODIUM ACETATE, 0.5MM NICKEL SULPHATE, 0.5MM AMP/PNP, 0.025 MM ADP, 2MM MAGNESIUM CHLORIDE, pH 7.3, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 3.20 Å R-free 0.276
3ZIA The structure of F1-ATPase from Saccharomyces cerevisiae inhibited by its regulatory protein IF1 提交 2013-01-07 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 10 PDB 声明:decameric(10) 与蛋白数一致
链 Q 34–311(278 aa)
未记录 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 5 ADP ADENOSINE-5'-DIPHOSPHATE × 5 EDO 1,2-ETHANEDIOL × 5 X-RAY DIFFRACTION
X-ray结晶条件 MICROBATCH;pH 7.5;296 K;ACTIVE F1-ATPASE (12 MG/ML) WAS EXCHANGED ON A DESALTING COLUMN INTO CRYSTALLISATION BUFFER, PREPARED IN D2O CONSISTING OF 100 MM BIS-TRIS PROPANE, PH 7.5, 100 MM SUCROSE, 1 MM ADP AND 10 MM MAGNESIUM SULPHATE. THEN THE ENZYME WAS INHIBITED AT 23C WITH A 4-FOLD MOLAR EXCESS OF YI1-53 (MUTATION E21A) IN THE PRESENCE OF 1 MM ATP AND 2 MM MAGNESIUM SULPHATE. FURTHER PORTIONS (5 UL OF A NEUTRALISED STOCK SOLUTION CONTAINING 200 MM ATP AND 400 MM MAGNESIUM SULPHATE/ML PROTEIN SOLUTION) WERE ADDED AFTER 5 AND 10 MIN. MORE THAN 95% OF THE ATP HYDROLYSIS ACTIVITY OF THE ENZYME WAS INHIBITED. SODIUM-POTASSIUM TARTRATE WAS ADDED TO 100 MM, AND THE CONCENTRATION OF THE PROTEIN SOLUTION WAS ADJUSTED TO 10 MG/ML WITH CRYSTALLISATION BUFFER. CRYSTALS WERE GROWN AT 23C IN 72 WELL MICRO-BATCH PLATES UNDER FILTERED PARAFFIN OIL. THE CRYSTALLISATION DROPS (4 UL) CONTAINED A 1:1 MIXTURE OF PROTEIN SOLUTION AND PRECIPITANT SOLUTION (20%-26% POLYETHYLENE GLYCOL 3000 AND 600 MM NACL PREPARED IN D2O).
分辨率 2.50 Å R-free 0.262
3ZIA The structure of F1-ATPase from Saccharomyces cerevisiae inhibited by its regulatory protein IF1 提交 2013-01-07 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 10 PDB 声明:decameric(10) 与蛋白数一致
链 G 34–311(278 aa)
未记录 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 5 ADP ADENOSINE-5'-DIPHOSPHATE × 5 EDO 1,2-ETHANEDIOL × 1 X-RAY DIFFRACTION
X-ray结晶条件 MICROBATCH;pH 7.5;296 K;ACTIVE F1-ATPASE (12 MG/ML) WAS EXCHANGED ON A DESALTING COLUMN INTO CRYSTALLISATION BUFFER, PREPARED IN D2O CONSISTING OF 100 MM BIS-TRIS PROPANE, PH 7.5, 100 MM SUCROSE, 1 MM ADP AND 10 MM MAGNESIUM SULPHATE. THEN THE ENZYME WAS INHIBITED AT 23C WITH A 4-FOLD MOLAR EXCESS OF YI1-53 (MUTATION E21A) IN THE PRESENCE OF 1 MM ATP AND 2 MM MAGNESIUM SULPHATE. FURTHER PORTIONS (5 UL OF A NEUTRALISED STOCK SOLUTION CONTAINING 200 MM ATP AND 400 MM MAGNESIUM SULPHATE/ML PROTEIN SOLUTION) WERE ADDED AFTER 5 AND 10 MIN. MORE THAN 95% OF THE ATP HYDROLYSIS ACTIVITY OF THE ENZYME WAS INHIBITED. SODIUM-POTASSIUM TARTRATE WAS ADDED TO 100 MM, AND THE CONCENTRATION OF THE PROTEIN SOLUTION WAS ADJUSTED TO 10 MG/ML WITH CRYSTALLISATION BUFFER. CRYSTALS WERE GROWN AT 23C IN 72 WELL MICRO-BATCH PLATES UNDER FILTERED PARAFFIN OIL. THE CRYSTALLISATION DROPS (4 UL) CONTAINED A 1:1 MIXTURE OF PROTEIN SOLUTION AND PRECIPITANT SOLUTION (20%-26% POLYETHYLENE GLYCOL 3000 AND 600 MM NACL PREPARED IN D2O).
分辨率 2.50 Å R-free 0.262
3ZRY Rotor architecture in the F(1)-c(10)-ring complex of the yeast F-ATP synthase 提交 2011-06-21 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 9 PDB 声明:nonameric(9) 与蛋白数一致
链 G 34–311(278 aa)
未记录 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 5 MG MAGNESIUM ION × 5 X-RAY DIFFRACTION
X-ray结晶条件 pH 6.5;10% PEG 4000, 100 MM SODIUM CHLORIDE, 100 MM HEPES PH 6.5 MIXED 1:1 WITH PROTEIN SOLUTION (10 MG/ML) CONTAINING 0.64 MM DDM, 25 MM TRIS PH 8.0, 100 MM SODIUM CHLORIDE, 25 MM TREHALOSE, 0.5 MM EDTA, 3 MM SODIUM AZIDE, 2 MM MAGNESIUM CHLORIDE, 0.04 MM ADP, 1 MM AMP-PNP, 0.1 MM DCCD, 2.5 MM DTT, 0.5 MM PMSF.
分辨率 6.50 Å R-free 0.339
4B2Q Model of the yeast F1Fo-ATP synthase dimer based on subtomogram average 提交 2012-07-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 46 PDB 声明:46-meric(46) 与蛋白数一致
链 G 34–311(278 aa) 片段:RESIDUES 34-311
链 g 34–311(278 aa) 片段:RESIDUES 34-311
未记录 ATP ADENOSINE-5'-TRIPHOSPHATE × 6 MG MAGNESIUM ION × 10 ADP ADENOSINE-5'-DIPHOSPHATE × 4 ELECTRON MICROSCOPY
cryo-EM缓冲液 250MM TREHALOSE 10NM TRIS- HCL PH7.4;pH 7.4;250MM TREHALOSE 10NM TRIS- HCL PH7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE;VITRIFICATION 1 -- CRYOGEN- ETHANE, TEMPERATURE- 100, INSTRUMENT- HOMEMADE PLUNGER, METHOD- SINGLE SIDE MANUAL BLOTTING FOR 5 SECONDS.,
分辨率 37.00 Å
6B8H Mosaic model of yeast mitochondrial ATP synthase monomer 提交 2017-10-07 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 60 PDB 声明:60-meric(60) 与蛋白数一致
链 G 34–311(278 aa)
链 j 34–311(278 aa)
未记录 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 10 MG MAGNESIUM ION × 10 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 NITROGEN
分辨率 3.60 Å
6CP3 Monomer yeast ATP synthase (F1Fo) reconstituted in nanodisc with inhibitor of oligomycin bound. 提交 2018-03-13 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 ATP ADENOSINE-5'-TRIPHOSPHATE × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 2 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 8;20 mM Tris-HCl, 150 mM NaCl, pH 8.0
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 3.80 Å
6CP6 Monomer yeast ATP synthase (F1Fo) reconstituted in nanodisc. 提交 2018-03-13 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 ATP ADENOSINE-5'-TRIPHOSPHATE × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 2 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 8;20 mM Tris-HCl, 150 mM NaCl, pH 8.0
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 3.60 Å
7TJT Yeast ATP synthase F1 region State 1-3catalytic beta_tight open without exogenous ATP 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 7 PDB 声明:heptameric(7) 与蛋白数一致
链 G 34–311(278 aa)
未记录 ATP ADENOSINE-5'-TRIPHOSPHATE × 3 MG MAGNESIUM ION × 3 PO4 PHOSPHATE ION × 1 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 3.20 Å
7TJU Yeast ATP synthase F1 region State 1-3binding beta_tight open without exogenous ATP 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 7 PDB 声明:heptameric(7) 与蛋白数一致
链 G 34–311(278 aa)
未记录 ATP ADENOSINE-5'-TRIPHOSPHATE × 3 MG MAGNESIUM ION × 3 PO4 PHOSPHATE ION × 1 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 3.30 Å
7TJV Yeast ATP synthase F1 region State 1catalytic(a) with 10 mM ATP 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 7 PDB 声明:heptameric(7) 与蛋白数一致
链 G 34–311(278 aa)
未记录 ATP ADENOSINE-5'-TRIPHOSPHATE × 4 MG MAGNESIUM ION × 5 ADP ADENOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 3.60 Å
7TJW Yeast ATP synthase F1 region State 1catalytic(e-h) with 10 mM ATP 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 7 PDB 声明:heptameric(7) 与蛋白数一致
链 G 34–311(278 aa)
未记录 ATP ADENOSINE-5'-TRIPHOSPHATE × 5 MG MAGNESIUM ION × 5 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 4.00 Å
7TJX Yeast ATP synthase F1 region State 1binding(a-d) with 10 mM ATP 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 7 PDB 声明:heptameric(7) 与蛋白数一致
链 G 34–311(278 aa)
未记录 ATP ADENOSINE-5'-TRIPHOSPHATE × 4 MG MAGNESIUM ION × 5 ADP ADENOSINE-5'-DIPHOSPHATE × 1 PO4 PHOSPHATE ION × 1 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 4.00 Å
7TJY Yeast ATP synthase State 1catalytic(a) without exogenous ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 3.80 Å
7TJZ Yeast ATP synthase State 1catalytic(b) without exogenous ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 4.40 Å
7TK0 Yeast ATP synthase State 1catalytic(c) without exogenous ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 4.40 Å
7TK1 Yeast ATP synthase State 1catalytic(d) without exogenous ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 7.10 Å
7TK2 Yeast ATP synthase State 1binding(a) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 6.50 Å
7TK3 Yeast ATP synthase State 1binding(b) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 6.30 Å
7TK4 Yeast ATP synthase State 1binding(c) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 7.00 Å
7TK5 Yeast ATP synthase State 1binding(d) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 7.80 Å
7TK6 Yeast ATP synthase State 1catalytic(a) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 6.50 Å
7TK7 Yeast ATP synthase State 1catalytic(b) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 6.70 Å
7TK8 Yeast ATP synthase State 1catalytic(c) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 4.70 Å
7TK9 Yeast ATP synthase State 1catalytic(d) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 6.00 Å
7TKA Yeast ATP synthase State 1catalytic(e) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 7.10 Å
7TKB Yeast ATP synthase State 1catalytic(f) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 6.30 Å
7TKC Yeast ATP synthase State 1catalytic(g) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 5.80 Å
7TKD Yeast ATP synthase State 1catalytic(h) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 7.70 Å
7TKE Yeast ATP synthase State 2binding(a) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 7.10 Å
7TKF Yeast ATP synthase State 2binding(b) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 7.10 Å
7TKG Yeast ATP synthase State 2catalytic(a) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 4.50 Å
7TKH Yeast ATP synthase State 2catalytic(b) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 4.40 Å
7TKI Yeast ATP synthase State 2catalytic(c) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 7.10 Å
7TKJ Yeast ATP synthase State 2catalytic(d) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 7.50 Å
7TKK Yeast ATP synthase State 2catalytic(e) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 7.30 Å
7TKL Yeast ATP synthase State 3binding(a) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 6.40 Å
7TKM Yeast ATP synthase State 3binding(b) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 4.50 Å
7TKN Yeast ATP synthase State 3binding(c) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 7.10 Å
7TKO Yeast ATP synthase State 3catalytic(a) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 4.80 Å
7TKP Yeast ATP synthase State 3catalytic(b) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 4.60 Å
7TKQ Yeast ATP synthase State 3catalytic(c) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 4.50 Å
7TKR Yeast ATP synthase State 3catalytic(d) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 6.50 Å
7TKS Yeast ATP synthase State 3catalytic(e) with 10 mM ATP backbone model 提交 2022-01-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 34–311(278 aa)
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 7.50 Å
8F29 Yeast ATP synthase in conformation-1 at pH 6 提交 2022-11-07 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 38–307(270 aa)
未记录 ADP ADENOSINE-5'-DIPHOSPHATE × 5 MG MAGNESIUM ION × 5 PO4 PHOSPHATE ION × 1 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 6
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 4.00 Å
8F39 Yeast ATP synthase in conformation-2, at pH 6 提交 2022-11-09 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 38–307(270 aa)
未记录 ADP ADENOSINE-5'-DIPHOSPHATE × 5 MG MAGNESIUM ION × 4 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 6
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 3.50 Å
8FL8 Yeast ATP Synthase structure in presence of MgATP 提交 2022-12-21 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 27 PDB 声明:27-meric(27) 与蛋白数一致
链 G 38–307(270 aa)
未记录 ATP ADENOSINE-5'-TRIPHOSPHATE × 4 MG MAGNESIUM ION × 5 ADP ADENOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 8
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 4.20 Å