6y53

human 17S U2 snRNP low resolution part

Method: ELECTRON MICROSCOPY
▼

1. Protein Identity and Related Structures Protein Identity & Related Structures

;U2 small nuclear ribonucleoprotein A' ;

OrganismNot specified

UniProt P09661

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 18 RNA 1 ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P08579) Splicing factor 3B subunit 6 × 1 (Q9Y3B4) Probable ATP-dependent RNA helicase DDX46 × 1 (Q7L014) Splicing factor 3A subunit 1 × 1 (Q15459) Splicing factor 3A subunit 2 × 1 (Q15428) Splicing factor 3A subunit 3 × 1 (Q12874) Splicing factor 3B subunit 4 × 1 (Q15427) ;Small nuclear ribonucleoprotein-associated proteins B and B' ; × 1 (P14678) Small nuclear ribonucleoprotein G × 1 (P62308) Small nuclear ribonucleoprotein Sm D1 × 1 (P62314) Small nuclear ribonucleoprotein Sm D2 × 1 (P62316) Small nuclear ribonucleoprotein Sm D3 × 1 (P62318) Small nuclear ribonucleoprotein E × 1 (P62304) Small nuclear ribonucleoprotein F × 1 (P62306) HIV Tat-specific factor 1 × 1 (O43719) Splicing factor 3B subunit 2 × 1 (Q13435) Splicing factor 3B subunit 1 × 1 (O75533) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RU2A_HUMAN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain a; PDBConstruct 1–255; UniProt 1–255

;U2 small nuclear ribonucleoprotein B'' ;

OrganismNot specified

UniProt P08579

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 18 RNA 1 ;U2 small nuclear ribonucleoprotein A' ; × 1 (P09661) Splicing factor 3B subunit 6 × 1 (Q9Y3B4) Probable ATP-dependent RNA helicase DDX46 × 1 (Q7L014) Splicing factor 3A subunit 1 × 1 (Q15459) Splicing factor 3A subunit 2 × 1 (Q15428) Splicing factor 3A subunit 3 × 1 (Q12874) Splicing factor 3B subunit 4 × 1 (Q15427) ;Small nuclear ribonucleoprotein-associated proteins B and B' ; × 1 (P14678) Small nuclear ribonucleoprotein G × 1 (P62308) Small nuclear ribonucleoprotein Sm D1 × 1 (P62314) Small nuclear ribonucleoprotein Sm D2 × 1 (P62316) Small nuclear ribonucleoprotein Sm D3 × 1 (P62318) Small nuclear ribonucleoprotein E × 1 (P62304) Small nuclear ribonucleoprotein F × 1 (P62306) HIV Tat-specific factor 1 × 1 (O43719) Splicing factor 3B subunit 2 × 1 (Q13435) Splicing factor 3B subunit 1 × 1 (O75533) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RU2B_HUMAN
Isoform —
PDB entities 2
Chains and sequence ranges Author chain b; PDBConstruct 1–225; UniProt 1–225

Splicing factor 3B subunit 6

OrganismNot specified

UniProt Q9Y3B4

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 18 RNA 1 ;U2 small nuclear ribonucleoprotein A' ; × 1 (P09661) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P08579) Probable ATP-dependent RNA helicase DDX46 × 1 (Q7L014) Splicing factor 3A subunit 1 × 1 (Q15459) Splicing factor 3A subunit 2 × 1 (Q15428) Splicing factor 3A subunit 3 × 1 (Q12874) Splicing factor 3B subunit 4 × 1 (Q15427) ;Small nuclear ribonucleoprotein-associated proteins B and B' ; × 1 (P14678) Small nuclear ribonucleoprotein G × 1 (P62308) Small nuclear ribonucleoprotein Sm D1 × 1 (P62314) Small nuclear ribonucleoprotein Sm D2 × 1 (P62316) Small nuclear ribonucleoprotein Sm D3 × 1 (P62318) Small nuclear ribonucleoprotein E × 1 (P62304) Small nuclear ribonucleoprotein F × 1 (P62306) HIV Tat-specific factor 1 × 1 (O43719) Splicing factor 3B subunit 2 × 1 (Q13435) Splicing factor 3B subunit 1 × 1 (O75533) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SF3B6_HUMAN
Isoform —
PDB entities 3
Chains and sequence ranges Author chain z; PDBConstruct 1–125; UniProt 1–125

Probable ATP-dependent RNA helicase DDX46

OrganismNot specified

UniProt Q7L014

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 18 RNA 1 ;U2 small nuclear ribonucleoprotein A' ; × 1 (P09661) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P08579) Splicing factor 3B subunit 6 × 1 (Q9Y3B4) Splicing factor 3A subunit 1 × 1 (Q15459) Splicing factor 3A subunit 2 × 1 (Q15428) Splicing factor 3A subunit 3 × 1 (Q12874) Splicing factor 3B subunit 4 × 1 (Q15427) ;Small nuclear ribonucleoprotein-associated proteins B and B' ; × 1 (P14678) Small nuclear ribonucleoprotein G × 1 (P62308) Small nuclear ribonucleoprotein Sm D1 × 1 (P62314) Small nuclear ribonucleoprotein Sm D2 × 1 (P62316) Small nuclear ribonucleoprotein Sm D3 × 1 (P62318) Small nuclear ribonucleoprotein E × 1 (P62304) Small nuclear ribonucleoprotein F × 1 (P62306) HIV Tat-specific factor 1 × 1 (O43719) Splicing factor 3B subunit 2 × 1 (Q13435) Splicing factor 3B subunit 1 × 1 (O75533) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name DDX46_HUMAN
Isoform —
PDB entities 4
Chains and sequence ranges Author chain p; PDBConstruct 1–1031; UniProt 1–1031

Splicing factor 3A subunit 1

OrganismNot specified

UniProt Q15459

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 18 RNA 1 ;U2 small nuclear ribonucleoprotein A' ; × 1 (P09661) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P08579) Splicing factor 3B subunit 6 × 1 (Q9Y3B4) Probable ATP-dependent RNA helicase DDX46 × 1 (Q7L014) Splicing factor 3A subunit 2 × 1 (Q15428) Splicing factor 3A subunit 3 × 1 (Q12874) Splicing factor 3B subunit 4 × 1 (Q15427) ;Small nuclear ribonucleoprotein-associated proteins B and B' ; × 1 (P14678) Small nuclear ribonucleoprotein G × 1 (P62308) Small nuclear ribonucleoprotein Sm D1 × 1 (P62314) Small nuclear ribonucleoprotein Sm D2 × 1 (P62316) Small nuclear ribonucleoprotein Sm D3 × 1 (P62318) Small nuclear ribonucleoprotein E × 1 (P62304) Small nuclear ribonucleoprotein F × 1 (P62306) HIV Tat-specific factor 1 × 1 (O43719) Splicing factor 3B subunit 2 × 1 (Q13435) Splicing factor 3B subunit 1 × 1 (O75533) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SF3A1_HUMAN
Isoform —
PDB entities 5
Chains and sequence ranges Author chain 6; PDBConstruct 1–793; UniProt 1–793

Splicing factor 3A subunit 2

OrganismNot specified

UniProt Q15428

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 18 RNA 1 ;U2 small nuclear ribonucleoprotein A' ; × 1 (P09661) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P08579) Splicing factor 3B subunit 6 × 1 (Q9Y3B4) Probable ATP-dependent RNA helicase DDX46 × 1 (Q7L014) Splicing factor 3A subunit 1 × 1 (Q15459) Splicing factor 3A subunit 3 × 1 (Q12874) Splicing factor 3B subunit 4 × 1 (Q15427) ;Small nuclear ribonucleoprotein-associated proteins B and B' ; × 1 (P14678) Small nuclear ribonucleoprotein G × 1 (P62308) Small nuclear ribonucleoprotein Sm D1 × 1 (P62314) Small nuclear ribonucleoprotein Sm D2 × 1 (P62316) Small nuclear ribonucleoprotein Sm D3 × 1 (P62318) Small nuclear ribonucleoprotein E × 1 (P62304) Small nuclear ribonucleoprotein F × 1 (P62306) HIV Tat-specific factor 1 × 1 (O43719) Splicing factor 3B subunit 2 × 1 (Q13435) Splicing factor 3B subunit 1 × 1 (O75533) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SF3A2_HUMAN
Isoform —
PDB entities 6
Chains and sequence ranges Author chain 7; PDBConstruct 1–464; UniProt 1–464

Splicing factor 3A subunit 3

OrganismNot specified

UniProt Q12874

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 18 RNA 1 ;U2 small nuclear ribonucleoprotein A' ; × 1 (P09661) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P08579) Splicing factor 3B subunit 6 × 1 (Q9Y3B4) Probable ATP-dependent RNA helicase DDX46 × 1 (Q7L014) Splicing factor 3A subunit 1 × 1 (Q15459) Splicing factor 3A subunit 2 × 1 (Q15428) Splicing factor 3B subunit 4 × 1 (Q15427) ;Small nuclear ribonucleoprotein-associated proteins B and B' ; × 1 (P14678) Small nuclear ribonucleoprotein G × 1 (P62308) Small nuclear ribonucleoprotein Sm D1 × 1 (P62314) Small nuclear ribonucleoprotein Sm D2 × 1 (P62316) Small nuclear ribonucleoprotein Sm D3 × 1 (P62318) Small nuclear ribonucleoprotein E × 1 (P62304) Small nuclear ribonucleoprotein F × 1 (P62306) HIV Tat-specific factor 1 × 1 (O43719) Splicing factor 3B subunit 2 × 1 (Q13435) Splicing factor 3B subunit 1 × 1 (O75533) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SF3A3_HUMAN
Isoform —
PDB entities 7
Chains and sequence ranges Author chain 9; PDBConstruct 1–501; UniProt 1–501

Splicing factor 3B subunit 4

OrganismNot specified

UniProt Q15427

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 18 RNA 1 ;U2 small nuclear ribonucleoprotein A' ; × 1 (P09661) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P08579) Splicing factor 3B subunit 6 × 1 (Q9Y3B4) Probable ATP-dependent RNA helicase DDX46 × 1 (Q7L014) Splicing factor 3A subunit 1 × 1 (Q15459) Splicing factor 3A subunit 2 × 1 (Q15428) Splicing factor 3A subunit 3 × 1 (Q12874) ;Small nuclear ribonucleoprotein-associated proteins B and B' ; × 1 (P14678) Small nuclear ribonucleoprotein G × 1 (P62308) Small nuclear ribonucleoprotein Sm D1 × 1 (P62314) Small nuclear ribonucleoprotein Sm D2 × 1 (P62316) Small nuclear ribonucleoprotein Sm D3 × 1 (P62318) Small nuclear ribonucleoprotein E × 1 (P62304) Small nuclear ribonucleoprotein F × 1 (P62306) HIV Tat-specific factor 1 × 1 (O43719) Splicing factor 3B subunit 2 × 1 (Q13435) Splicing factor 3B subunit 1 × 1 (O75533) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SF3B4_HUMAN
Isoform —
PDB entities 8
Chains and sequence ranges Author chain o; PDBConstruct 1–424; UniProt 1–424

;Small nuclear ribonucleoprotein-associated proteins B and B' ;

OrganismNot specified

UniProt P14678

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 18 RNA 1 ;U2 small nuclear ribonucleoprotein A' ; × 1 (P09661) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P08579) Splicing factor 3B subunit 6 × 1 (Q9Y3B4) Probable ATP-dependent RNA helicase DDX46 × 1 (Q7L014) Splicing factor 3A subunit 1 × 1 (Q15459) Splicing factor 3A subunit 2 × 1 (Q15428) Splicing factor 3A subunit 3 × 1 (Q12874) Splicing factor 3B subunit 4 × 1 (Q15427) Small nuclear ribonucleoprotein G × 1 (P62308) Small nuclear ribonucleoprotein Sm D1 × 1 (P62314) Small nuclear ribonucleoprotein Sm D2 × 1 (P62316) Small nuclear ribonucleoprotein Sm D3 × 1 (P62318) Small nuclear ribonucleoprotein E × 1 (P62304) Small nuclear ribonucleoprotein F × 1 (P62306) HIV Tat-specific factor 1 × 1 (O43719) Splicing factor 3B subunit 2 × 1 (Q13435) Splicing factor 3B subunit 1 × 1 (O75533) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RSMB_HUMAN
Isoform —
PDB entities 9
Chains and sequence ranges Author chain m; PDBConstruct 1–240; UniProt 1–240

Small nuclear ribonucleoprotein G

OrganismNot specified

UniProt P62308

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 18 RNA 1 ;U2 small nuclear ribonucleoprotein A' ; × 1 (P09661) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P08579) Splicing factor 3B subunit 6 × 1 (Q9Y3B4) Probable ATP-dependent RNA helicase DDX46 × 1 (Q7L014) Splicing factor 3A subunit 1 × 1 (Q15459) Splicing factor 3A subunit 2 × 1 (Q15428) Splicing factor 3A subunit 3 × 1 (Q12874) Splicing factor 3B subunit 4 × 1 (Q15427) ;Small nuclear ribonucleoprotein-associated proteins B and B' ; × 1 (P14678) Small nuclear ribonucleoprotein Sm D1 × 1 (P62314) Small nuclear ribonucleoprotein Sm D2 × 1 (P62316) Small nuclear ribonucleoprotein Sm D3 × 1 (P62318) Small nuclear ribonucleoprotein E × 1 (P62304) Small nuclear ribonucleoprotein F × 1 (P62306) HIV Tat-specific factor 1 × 1 (O43719) Splicing factor 3B subunit 2 × 1 (Q13435) Splicing factor 3B subunit 1 × 1 (O75533) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RUXG_HUMAN
Isoform —
PDB entities 10
Chains and sequence ranges Author chain k; PDBConstruct 1–76; UniProt 1–76

Small nuclear ribonucleoprotein Sm D1

OrganismNot specified

UniProt P62314

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 18 RNA 1 ;U2 small nuclear ribonucleoprotein A' ; × 1 (P09661) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P08579) Splicing factor 3B subunit 6 × 1 (Q9Y3B4) Probable ATP-dependent RNA helicase DDX46 × 1 (Q7L014) Splicing factor 3A subunit 1 × 1 (Q15459) Splicing factor 3A subunit 2 × 1 (Q15428) Splicing factor 3A subunit 3 × 1 (Q12874) Splicing factor 3B subunit 4 × 1 (Q15427) ;Small nuclear ribonucleoprotein-associated proteins B and B' ; × 1 (P14678) Small nuclear ribonucleoprotein G × 1 (P62308) Small nuclear ribonucleoprotein Sm D2 × 1 (P62316) Small nuclear ribonucleoprotein Sm D3 × 1 (P62318) Small nuclear ribonucleoprotein E × 1 (P62304) Small nuclear ribonucleoprotein F × 1 (P62306) HIV Tat-specific factor 1 × 1 (O43719) Splicing factor 3B subunit 2 × 1 (Q13435) Splicing factor 3B subunit 1 × 1 (O75533) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SMD1_HUMAN
Isoform —
PDB entities 11
Chains and sequence ranges Author chain n; PDBConstruct 1–119; UniProt 1–119

Small nuclear ribonucleoprotein Sm D2

OrganismNot specified

UniProt P62316

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 18 RNA 1 ;U2 small nuclear ribonucleoprotein A' ; × 1 (P09661) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P08579) Splicing factor 3B subunit 6 × 1 (Q9Y3B4) Probable ATP-dependent RNA helicase DDX46 × 1 (Q7L014) Splicing factor 3A subunit 1 × 1 (Q15459) Splicing factor 3A subunit 2 × 1 (Q15428) Splicing factor 3A subunit 3 × 1 (Q12874) Splicing factor 3B subunit 4 × 1 (Q15427) ;Small nuclear ribonucleoprotein-associated proteins B and B' ; × 1 (P14678) Small nuclear ribonucleoprotein G × 1 (P62308) Small nuclear ribonucleoprotein Sm D1 × 1 (P62314) Small nuclear ribonucleoprotein Sm D3 × 1 (P62318) Small nuclear ribonucleoprotein E × 1 (P62304) Small nuclear ribonucleoprotein F × 1 (P62306) HIV Tat-specific factor 1 × 1 (O43719) Splicing factor 3B subunit 2 × 1 (Q13435) Splicing factor 3B subunit 1 × 1 (O75533) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SMD2_HUMAN
Isoform —
PDB entities 12
Chains and sequence ranges Author chain h; PDBConstruct 1–118; UniProt 1–118

Small nuclear ribonucleoprotein Sm D3

OrganismNot specified

UniProt P62318

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 18 RNA 1 ;U2 small nuclear ribonucleoprotein A' ; × 1 (P09661) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P08579) Splicing factor 3B subunit 6 × 1 (Q9Y3B4) Probable ATP-dependent RNA helicase DDX46 × 1 (Q7L014) Splicing factor 3A subunit 1 × 1 (Q15459) Splicing factor 3A subunit 2 × 1 (Q15428) Splicing factor 3A subunit 3 × 1 (Q12874) Splicing factor 3B subunit 4 × 1 (Q15427) ;Small nuclear ribonucleoprotein-associated proteins B and B' ; × 1 (P14678) Small nuclear ribonucleoprotein G × 1 (P62308) Small nuclear ribonucleoprotein Sm D1 × 1 (P62314) Small nuclear ribonucleoprotein Sm D2 × 1 (P62316) Small nuclear ribonucleoprotein E × 1 (P62304) Small nuclear ribonucleoprotein F × 1 (P62306) HIV Tat-specific factor 1 × 1 (O43719) Splicing factor 3B subunit 2 × 1 (Q13435) Splicing factor 3B subunit 1 × 1 (O75533) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SMD3_HUMAN
Isoform —
PDB entities 13
Chains and sequence ranges Author chain l; PDBConstruct 1–126; UniProt 1–126

Small nuclear ribonucleoprotein E

OrganismNot specified

UniProt P62304

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 18 RNA 1 ;U2 small nuclear ribonucleoprotein A' ; × 1 (P09661) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P08579) Splicing factor 3B subunit 6 × 1 (Q9Y3B4) Probable ATP-dependent RNA helicase DDX46 × 1 (Q7L014) Splicing factor 3A subunit 1 × 1 (Q15459) Splicing factor 3A subunit 2 × 1 (Q15428) Splicing factor 3A subunit 3 × 1 (Q12874) Splicing factor 3B subunit 4 × 1 (Q15427) ;Small nuclear ribonucleoprotein-associated proteins B and B' ; × 1 (P14678) Small nuclear ribonucleoprotein G × 1 (P62308) Small nuclear ribonucleoprotein Sm D1 × 1 (P62314) Small nuclear ribonucleoprotein Sm D2 × 1 (P62316) Small nuclear ribonucleoprotein Sm D3 × 1 (P62318) Small nuclear ribonucleoprotein F × 1 (P62306) HIV Tat-specific factor 1 × 1 (O43719) Splicing factor 3B subunit 2 × 1 (Q13435) Splicing factor 3B subunit 1 × 1 (O75533) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RUXE_HUMAN
Isoform —
PDB entities 14
Chains and sequence ranges Author chain j; PDBConstruct 1–92; UniProt 1–92

Small nuclear ribonucleoprotein F

OrganismNot specified

UniProt P62306

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 18 RNA 1 ;U2 small nuclear ribonucleoprotein A' ; × 1 (P09661) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P08579) Splicing factor 3B subunit 6 × 1 (Q9Y3B4) Probable ATP-dependent RNA helicase DDX46 × 1 (Q7L014) Splicing factor 3A subunit 1 × 1 (Q15459) Splicing factor 3A subunit 2 × 1 (Q15428) Splicing factor 3A subunit 3 × 1 (Q12874) Splicing factor 3B subunit 4 × 1 (Q15427) ;Small nuclear ribonucleoprotein-associated proteins B and B' ; × 1 (P14678) Small nuclear ribonucleoprotein G × 1 (P62308) Small nuclear ribonucleoprotein Sm D1 × 1 (P62314) Small nuclear ribonucleoprotein Sm D2 × 1 (P62316) Small nuclear ribonucleoprotein Sm D3 × 1 (P62318) Small nuclear ribonucleoprotein E × 1 (P62304) HIV Tat-specific factor 1 × 1 (O43719) Splicing factor 3B subunit 2 × 1 (Q13435) Splicing factor 3B subunit 1 × 1 (O75533) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RUXF_HUMAN
Isoform —
PDB entities 15
Chains and sequence ranges Author chain i; PDBConstruct 1–86; UniProt 1–86

HIV Tat-specific factor 1

OrganismNot specified

UniProt O43719

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 18 RNA 1 ;U2 small nuclear ribonucleoprotein A' ; × 1 (P09661) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P08579) Splicing factor 3B subunit 6 × 1 (Q9Y3B4) Probable ATP-dependent RNA helicase DDX46 × 1 (Q7L014) Splicing factor 3A subunit 1 × 1 (Q15459) Splicing factor 3A subunit 2 × 1 (Q15428) Splicing factor 3A subunit 3 × 1 (Q12874) Splicing factor 3B subunit 4 × 1 (Q15427) ;Small nuclear ribonucleoprotein-associated proteins B and B' ; × 1 (P14678) Small nuclear ribonucleoprotein G × 1 (P62308) Small nuclear ribonucleoprotein Sm D1 × 1 (P62314) Small nuclear ribonucleoprotein Sm D2 × 1 (P62316) Small nuclear ribonucleoprotein Sm D3 × 1 (P62318) Small nuclear ribonucleoprotein E × 1 (P62304) Small nuclear ribonucleoprotein F × 1 (P62306) Splicing factor 3B subunit 2 × 1 (Q13435) Splicing factor 3B subunit 1 × 1 (O75533) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name HTSF1_HUMAN
Isoform —
PDB entities 16
Chains and sequence ranges Author chain q; PDBConstruct 1–755; UniProt 1–755

Splicing factor 3B subunit 2

OrganismNot specified

UniProt Q13435

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 18 RNA 1 ;U2 small nuclear ribonucleoprotein A' ; × 1 (P09661) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P08579) Splicing factor 3B subunit 6 × 1 (Q9Y3B4) Probable ATP-dependent RNA helicase DDX46 × 1 (Q7L014) Splicing factor 3A subunit 1 × 1 (Q15459) Splicing factor 3A subunit 2 × 1 (Q15428) Splicing factor 3A subunit 3 × 1 (Q12874) Splicing factor 3B subunit 4 × 1 (Q15427) ;Small nuclear ribonucleoprotein-associated proteins B and B' ; × 1 (P14678) Small nuclear ribonucleoprotein G × 1 (P62308) Small nuclear ribonucleoprotein Sm D1 × 1 (P62314) Small nuclear ribonucleoprotein Sm D2 × 1 (P62316) Small nuclear ribonucleoprotein Sm D3 × 1 (P62318) Small nuclear ribonucleoprotein E × 1 (P62304) Small nuclear ribonucleoprotein F × 1 (P62306) HIV Tat-specific factor 1 × 1 (O43719) Splicing factor 3B subunit 1 × 1 (O75533) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SF3B2_HUMAN
Isoform —
PDB entities 17
Chains and sequence ranges Author chain 8; PDBConstruct 1–895; UniProt 1–895

Splicing factor 3B subunit 1

OrganismNot specified

UniProt O75533

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 18 RNA 1 ;U2 small nuclear ribonucleoprotein A' ; × 1 (P09661) ;U2 small nuclear ribonucleoprotein B'' ; × 1 (P08579) Splicing factor 3B subunit 6 × 1 (Q9Y3B4) Probable ATP-dependent RNA helicase DDX46 × 1 (Q7L014) Splicing factor 3A subunit 1 × 1 (Q15459) Splicing factor 3A subunit 2 × 1 (Q15428) Splicing factor 3A subunit 3 × 1 (Q12874) Splicing factor 3B subunit 4 × 1 (Q15427) ;Small nuclear ribonucleoprotein-associated proteins B and B' ; × 1 (P14678) Small nuclear ribonucleoprotein G × 1 (P62308) Small nuclear ribonucleoprotein Sm D1 × 1 (P62314) Small nuclear ribonucleoprotein Sm D2 × 1 (P62316) Small nuclear ribonucleoprotein Sm D3 × 1 (P62318) Small nuclear ribonucleoprotein E × 1 (P62304) Small nuclear ribonucleoprotein F × 1 (P62306) HIV Tat-specific factor 1 × 1 (O43719) Splicing factor 3B subunit 2 × 1 (Q13435) U2 snRNA × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SF3B1_HUMAN
Isoform —
PDB entities 18
Chains and sequence ranges Author chain u; PDBConstruct 1–1304; UniProt 1–1304

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

▼

2. Structure Basics 2. Structure Basics

Entry ID entry_id6y53
Deposition date deposition_date2020-02-24
Structure title titlehuman 17S U2 snRNP low resolution part
Keywords keywords17S U2 snRNP, SPLICING; SPLICING
Experimental Method methodELECTRON MICROSCOPY
▼

3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

6y53__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

6y53__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

6y53__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)62.54 Å
Rg (electron density)63.09 Å
Total Rg62.94 Å
Atom count11290
Residues2324
Excluded volume160210 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 6y53__assembly_1__model_1 nonadecameric (19) Success 4.1.3-1-20251215 (887e7ef) View Download
▶

4. Crystallography and Experiment 4. Crystallography & Experiment

▶

5. Entities and Polymers Entities & Polymers (19)

▶

7. Citations (1)