8umi

consensus map of PICdeltaTFIIK form1

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

General transcription and DNA repair factor IIH helicase subunit XPD

OrganismNot specified

UniProt A0A6A5Q1C1

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A6A5Q1C1_YEASX
Isoform —
PDB entities 1
Chains and sequence ranges Author chain 0; PDBConstruct 1–778; UniProt 1–778

TFB1 isoform 1

OrganismNot specified

UniProt A0A6A5Q1T4

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A6A5Q1T4_YEASX
Isoform —
PDB entities 2
Chains and sequence ranges Author chain 1; PDBConstruct 1–642; UniProt 1–642

RNA polymerase II transcription factor B subunit 2

OrganismNot specified

UniProt A0A6A5Q2X3

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A6A5Q2X3_YEASX
Isoform —
PDB entities 3
Chains and sequence ranges Author chain 2; PDBConstruct 1–513; UniProt 1–513

General transcription and DNA repair factor IIH subunit TFB4

OrganismNot specified

UniProt A0A8H4BW51

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A8H4BW51_YEASX
Isoform —
PDB entities 4
Chains and sequence ranges Author chain 4; PDBConstruct 1–338; UniProt 1–338

General transcription and DNA repair factor IIH

OrganismNot specified

UniProt A0A6L0ZMK2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A6L0ZMK2_YEASX
Isoform —
PDB entities 5
Chains and sequence ranges Author chain 6; PDBConstruct 1–461; UniProt 1–461

General transcription and DNA repair factor IIH helicase subunit XPB

OrganismNot specified

UniProt Q00578

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RAD25_YEAST
Isoform —
PDB entities 6
Chains and sequence ranges Author chain 7; PDBConstruct 1–843; UniProt 1–843

Transcription initiation factor IIB

Saccharomyces cerevisiae

UniProt P29055

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TF2B_YEAST
Isoform —
PDB entities 7
Chains and sequence ranges Author chain M; PDBConstruct 1–345; UniProt 1–345

DNA-directed RNA polymerase subunit

OrganismNot specified

UniProt A0A6A5Q1P2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A6A5Q1P2_YEASX
Isoform —
PDB entities 8
Chains and sequence ranges Author chain A; PDBConstruct 1–1733; UniProt 1–1733

DNA-directed RNA polymerase subunit beta

OrganismNot specified

UniProt A0A6A5Q4H2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A6A5Q4H2_YEASX
Isoform —
PDB entities 9
Chains and sequence ranges Author chain B; PDBConstruct 1–1224; UniProt 1–1224

DNA-directed RNA polymerase II subunit RPB3

OrganismNot specified

UniProt A0A6A5Q0Z3

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A6A5Q0Z3_YEASX
Isoform —
PDB entities 10
Chains and sequence ranges Author chain C; PDBConstruct 1–318; UniProt 1–318

DNA-directed RNA polymerase II subunit RPB4

OrganismNot specified

UniProt A0A6A5PTI6

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A6A5PTI6_YEASX
Isoform —
PDB entities 11
Chains and sequence ranges Author chain D; PDBConstruct 1–221; UniProt 1–221

DNA-directed RNA polymerases I, II, and III subunit RPABC1

OrganismNot specified

UniProt A0A6A5Q456

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A6A5Q456_YEASX
Isoform —
PDB entities 12
Chains and sequence ranges Author chain E; PDBConstruct 1–215; UniProt 1–215

DNA-directed RNA polymerases I, II, and III subunit RPABC2

OrganismNot specified

UniProt P20435

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPAB2_YEAST
Isoform —
PDB entities 13
Chains and sequence ranges Author chain F; PDBConstruct 1–155; UniProt 1–155

DNA-directed RNA polymerase II subunit RPB7

OrganismNot specified

UniProt A0A6A5Q270

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A6A5Q270_YEASX
Isoform —
PDB entities 14
Chains and sequence ranges Author chain G; PDBConstruct 1–171; UniProt 1–171

DNA-directed RNA polymerases I, II, and III subunit RPABC3

OrganismNot specified

UniProt A0A6A5Q8C2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A6A5Q8C2_YEASX
Isoform —
PDB entities 15
Chains and sequence ranges Author chain H; PDBConstruct 1–146; UniProt 1–146

DNA-directed RNA polymerase II subunit RPB9

OrganismNot specified

UniProt A0A7I9EWC2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A7I9EWC2_YEASX
Isoform —
PDB entities 16
Chains and sequence ranges Author chain I; PDBConstruct 1–122; UniProt 1–122

DNA-directed RNA polymerases II subunit RPABC5

OrganismNot specified

UniProt A0A6A5Q7Q6

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A6A5Q7Q6_YEASX
Isoform —
PDB entities 17
Chains and sequence ranges Author chain J; PDBConstruct 1–70; UniProt 1–70

DNA-directed RNA polymerase II subunit RPB11

OrganismNot specified

UniProt A0A6A5Q7A1

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A6A5Q7A1_YEASX
Isoform —
PDB entities 18
Chains and sequence ranges Author chain K; PDBConstruct 1–120; UniProt 1–120

DNA-directed RNA polymerases II subunit RPABC4

OrganismNot specified

UniProt A0A6A5PY05

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A6A5PY05_YEASX
Isoform —
PDB entities 19
Chains and sequence ranges Author chain L; PDBConstruct 1–70; UniProt 1–70

Transcription initiation factor IIF subunit alpha

OrganismNot specified

UniProt P41895

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name T2FA_YEAST
Isoform —
PDB entities 20
Chains and sequence ranges Author chain Q; PDBConstruct 1–735; UniProt 1–735

Transcription initiation factor IIF subunit beta

OrganismNot specified

UniProt A0A6A5PZ00

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A6A5PZ00_YEASX
Isoform —
PDB entities 21
Chains and sequence ranges Author chain P; PDBConstruct 1–400; UniProt 1–400

Transcription elongation factor

Saccharomyces cerevisiae

UniProt A0A6A5PWR6

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A6A5PWR6_YEASX
Isoform —
PDB entities 22
Chains and sequence ranges Author chain S; PDBConstruct 1–309; UniProt 1–309

TATA-box-binding protein

Saccharomyces cerevisiae

UniProt P13393

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TBP_YEAST
Isoform —
PDB entities 23
Chains and sequence ranges Author chain O; PDBConstruct 1–240; UniProt 1–240

Transcription initiation factor IIA large subunit

Saccharomyces cerevisiae

UniProt A0A6A5Q2T8

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A6A5Q2T8_YEASX
Isoform —
PDB entities 24
Chains and sequence ranges Author chain U; PDBConstruct 1–286; UniProt 1–286

Transcription initiation factor IIA subunit 2

Saccharomyces cerevisiae

UniProt A0A6A5PRZ0

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A6A5PRZ0_YEASX
Isoform —
PDB entities 25
Chains and sequence ranges Author chain V; PDBConstruct 1–122; UniProt 1–122

Transcription initiation factor IIE subunit alpha

OrganismNot specified

UniProt A0A6A5PTU5

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A6A5PTU5_YEASX
Isoform —
PDB entities 26
Chains and sequence ranges Author chain W; PDBConstruct 1–482; UniProt 1–482

Transcription initiation factor IIE subunit beta

OrganismNot specified

UniProt A0A6A5PS93

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) General transcription and DNA repair factor IIH subunit TFB5 × 1 (Q3E7C1) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A6A5PS93_YEASX
Isoform —
PDB entities 27
Chains and sequence ranges Author chain X; PDBConstruct 1–328; UniProt 1–328

General transcription and DNA repair factor IIH subunit TFB5

OrganismNot specified

UniProt Q3E7C1

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 28 DNA 2 General transcription and DNA repair factor IIH helicase subunit XPD × 1 (A0A6A5Q1C1) TFB1 isoform 1 × 1 (A0A6A5Q1T4) RNA polymerase II transcription factor B subunit 2 × 1 (A0A6A5Q2X3) General transcription and DNA repair factor IIH subunit TFB4 × 1 (A0A8H4BW51) General transcription and DNA repair factor IIH × 1 (A0A6L0ZMK2) General transcription and DNA repair factor IIH helicase subunit XPB × 1 (Q00578) Transcription initiation factor IIB × 1 (P29055) DNA-directed RNA polymerase subunit × 1 (A0A6A5Q1P2) DNA-directed RNA polymerase subunit beta × 1 (A0A6A5Q4H2) DNA-directed RNA polymerase II subunit RPB3 × 1 (A0A6A5Q0Z3) DNA-directed RNA polymerase II subunit RPB4 × 1 (A0A6A5PTI6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (A0A6A5Q456) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (A0A6A5Q270) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (A0A6A5Q8C2) DNA-directed RNA polymerase II subunit RPB9 × 1 (A0A7I9EWC2) DNA-directed RNA polymerases II subunit RPABC5 × 1 (A0A6A5Q7Q6) DNA-directed RNA polymerase II subunit RPB11 × 1 (A0A6A5Q7A1) DNA-directed RNA polymerases II subunit RPABC4 × 1 (A0A6A5PY05) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (A0A6A5PZ00) Transcription elongation factor × 1 (A0A6A5PWR6) TATA-box-binding protein × 1 (P13393) Transcription initiation factor IIA large subunit × 1 (A0A6A5Q2T8) Transcription initiation factor IIA subunit 2 × 1 (A0A6A5PRZ0) Transcription initiation factor IIE subunit alpha × 1 (A0A6A5PTU5) Transcription initiation factor IIE subunit beta × 1 (A0A6A5PS93) DNA (64-MER) × 1 DNA (64-MER) × 1 IRON/SULFUR CLUSTER × 1 ZINC ION × 15 MAGNESIUM ION × 2 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TFB5_YEAST
Isoform —
PDB entities 28
Chains and sequence ranges Author chain 5; PDBConstruct 1–72; UniProt 1–72

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id8umi
Deposition date deposition_date2023-10-17
Structure title titleconsensus map of PICdeltaTFIIK form1
Keywords keywordsTranscription. POL II, TRANSCRIPTION; TRANSCRIPTION
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

8umi__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

8umi__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 1010 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

8umi__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)79.27 Å
Rg (electron density)79.91 Å
Total Rg79.85 Å
Atom count70523
Residues8668
Excluded volume1253100 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 8umi__assembly_1__model_1 30-meric (30) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (33)

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7. Citations (1)