6zit

bovine ATP synthase Stator domain, state 2

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

ATP synthase protein 8

OrganismNot specified

UniProt P03929

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 15 ATP synthase subunit a × 1 (P00847) ATP synthase subunit d, mitochondrial × 1 (P13620) ATP synthase subunit e, mitochondrial × 1 (Q00361) ATP synthase subunit f, mitochondrial × 1 (Q28851) ATP synthase subunit g, mitochondrial × 1 (Q28852) ATP synthase subunit ATP5MPL, mitochondrial × 1 (P14790) ATP synthase membrane subunit DAPIT, mitochondrial × 1 (Q3ZBI7) ATP synthase F(0) complex subunit C2, mitochondrial × 3 (P07926) ATP synthase F(0) complex subunit B1, mitochondrial × 1 (P13619) ATP synthase-coupling factor 6, mitochondrial × 1 (P02721) ATP synthase subunit O, mitochondrial × 1 (P13621) ATP synthase subunit alpha, mitochondrial × 1 (P19483) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATP8_BOVIN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain 8; PDBConstruct 1–66; UniProt 1–66

ATP synthase subunit a

OrganismNot specified

UniProt P00847

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 15 ATP synthase protein 8 × 1 (P03929) ATP synthase subunit d, mitochondrial × 1 (P13620) ATP synthase subunit e, mitochondrial × 1 (Q00361) ATP synthase subunit f, mitochondrial × 1 (Q28851) ATP synthase subunit g, mitochondrial × 1 (Q28852) ATP synthase subunit ATP5MPL, mitochondrial × 1 (P14790) ATP synthase membrane subunit DAPIT, mitochondrial × 1 (Q3ZBI7) ATP synthase F(0) complex subunit C2, mitochondrial × 3 (P07926) ATP synthase F(0) complex subunit B1, mitochondrial × 1 (P13619) ATP synthase-coupling factor 6, mitochondrial × 1 (P02721) ATP synthase subunit O, mitochondrial × 1 (P13621) ATP synthase subunit alpha, mitochondrial × 1 (P19483) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATP6_BOVIN
Isoform —
PDB entities 2
Chains and sequence ranges Author chain a; PDBConstruct 1–226; UniProt 1–226

ATP synthase subunit d, mitochondrial

OrganismNot specified

UniProt P13620

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 15 ATP synthase protein 8 × 1 (P03929) ATP synthase subunit a × 1 (P00847) ATP synthase subunit e, mitochondrial × 1 (Q00361) ATP synthase subunit f, mitochondrial × 1 (Q28851) ATP synthase subunit g, mitochondrial × 1 (Q28852) ATP synthase subunit ATP5MPL, mitochondrial × 1 (P14790) ATP synthase membrane subunit DAPIT, mitochondrial × 1 (Q3ZBI7) ATP synthase F(0) complex subunit C2, mitochondrial × 3 (P07926) ATP synthase F(0) complex subunit B1, mitochondrial × 1 (P13619) ATP synthase-coupling factor 6, mitochondrial × 1 (P02721) ATP synthase subunit O, mitochondrial × 1 (P13621) ATP synthase subunit alpha, mitochondrial × 1 (P19483) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATP5H_BOVIN
Isoform —
PDB entities 3
Chains and sequence ranges Author chain d; PDBConstruct 1–160; UniProt 2–161

ATP synthase subunit e, mitochondrial

OrganismNot specified

UniProt Q00361

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 15 ATP synthase protein 8 × 1 (P03929) ATP synthase subunit a × 1 (P00847) ATP synthase subunit d, mitochondrial × 1 (P13620) ATP synthase subunit f, mitochondrial × 1 (Q28851) ATP synthase subunit g, mitochondrial × 1 (Q28852) ATP synthase subunit ATP5MPL, mitochondrial × 1 (P14790) ATP synthase membrane subunit DAPIT, mitochondrial × 1 (Q3ZBI7) ATP synthase F(0) complex subunit C2, mitochondrial × 3 (P07926) ATP synthase F(0) complex subunit B1, mitochondrial × 1 (P13619) ATP synthase-coupling factor 6, mitochondrial × 1 (P02721) ATP synthase subunit O, mitochondrial × 1 (P13621) ATP synthase subunit alpha, mitochondrial × 1 (P19483) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATP5I_BOVIN
Isoform —
PDB entities 4
Chains and sequence ranges Author chain e; PDBConstruct 1–70; UniProt 2–71

ATP synthase subunit f, mitochondrial

OrganismNot specified

UniProt Q28851

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 15 ATP synthase protein 8 × 1 (P03929) ATP synthase subunit a × 1 (P00847) ATP synthase subunit d, mitochondrial × 1 (P13620) ATP synthase subunit e, mitochondrial × 1 (Q00361) ATP synthase subunit g, mitochondrial × 1 (Q28852) ATP synthase subunit ATP5MPL, mitochondrial × 1 (P14790) ATP synthase membrane subunit DAPIT, mitochondrial × 1 (Q3ZBI7) ATP synthase F(0) complex subunit C2, mitochondrial × 3 (P07926) ATP synthase F(0) complex subunit B1, mitochondrial × 1 (P13619) ATP synthase-coupling factor 6, mitochondrial × 1 (P02721) ATP synthase subunit O, mitochondrial × 1 (P13621) ATP synthase subunit alpha, mitochondrial × 1 (P19483) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATPK_BOVIN
Isoform —
PDB entities 5
Chains and sequence ranges Author chain f; PDBConstruct 1–87; UniProt 2–88

ATP synthase subunit g, mitochondrial

OrganismNot specified

UniProt Q28852

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 15 ATP synthase protein 8 × 1 (P03929) ATP synthase subunit a × 1 (P00847) ATP synthase subunit d, mitochondrial × 1 (P13620) ATP synthase subunit e, mitochondrial × 1 (Q00361) ATP synthase subunit f, mitochondrial × 1 (Q28851) ATP synthase subunit ATP5MPL, mitochondrial × 1 (P14790) ATP synthase membrane subunit DAPIT, mitochondrial × 1 (Q3ZBI7) ATP synthase F(0) complex subunit C2, mitochondrial × 3 (P07926) ATP synthase F(0) complex subunit B1, mitochondrial × 1 (P13619) ATP synthase-coupling factor 6, mitochondrial × 1 (P02721) ATP synthase subunit O, mitochondrial × 1 (P13621) ATP synthase subunit alpha, mitochondrial × 1 (P19483) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATP5L_BOVIN
Isoform —
PDB entities 6
Chains and sequence ranges Author chain g; PDBConstruct 1–102; UniProt 2–103

ATP synthase subunit ATP5MPL, mitochondrial

OrganismNot specified

UniProt P14790

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 15 ATP synthase protein 8 × 1 (P03929) ATP synthase subunit a × 1 (P00847) ATP synthase subunit d, mitochondrial × 1 (P13620) ATP synthase subunit e, mitochondrial × 1 (Q00361) ATP synthase subunit f, mitochondrial × 1 (Q28851) ATP synthase subunit g, mitochondrial × 1 (Q28852) ATP synthase membrane subunit DAPIT, mitochondrial × 1 (Q3ZBI7) ATP synthase F(0) complex subunit C2, mitochondrial × 3 (P07926) ATP synthase F(0) complex subunit B1, mitochondrial × 1 (P13619) ATP synthase-coupling factor 6, mitochondrial × 1 (P02721) ATP synthase subunit O, mitochondrial × 1 (P13621) ATP synthase subunit alpha, mitochondrial × 1 (P19483) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATP68_BOVIN
Isoform —
PDB entities 7
Chains and sequence ranges Author chain j; PDBConstruct 1–60; UniProt 1–60

ATP synthase membrane subunit DAPIT, mitochondrial

OrganismNot specified

UniProt Q3ZBI7

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 15 ATP synthase protein 8 × 1 (P03929) ATP synthase subunit a × 1 (P00847) ATP synthase subunit d, mitochondrial × 1 (P13620) ATP synthase subunit e, mitochondrial × 1 (Q00361) ATP synthase subunit f, mitochondrial × 1 (Q28851) ATP synthase subunit g, mitochondrial × 1 (Q28852) ATP synthase subunit ATP5MPL, mitochondrial × 1 (P14790) ATP synthase F(0) complex subunit C2, mitochondrial × 3 (P07926) ATP synthase F(0) complex subunit B1, mitochondrial × 1 (P13619) ATP synthase-coupling factor 6, mitochondrial × 1 (P02721) ATP synthase subunit O, mitochondrial × 1 (P13621) ATP synthase subunit alpha, mitochondrial × 1 (P19483) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATPMD_BOVIN
Isoform —
PDB entities 8
Chains and sequence ranges Author chain k; PDBConstruct 1–57; UniProt 2–58

ATP synthase F(0) complex subunit C2, mitochondrial

OrganismNot specified

UniProt P07926

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 15 ATP synthase protein 8 × 1 (P03929) ATP synthase subunit a × 1 (P00847) ATP synthase subunit d, mitochondrial × 1 (P13620) ATP synthase subunit e, mitochondrial × 1 (Q00361) ATP synthase subunit f, mitochondrial × 1 (Q28851) ATP synthase subunit g, mitochondrial × 1 (Q28852) ATP synthase subunit ATP5MPL, mitochondrial × 1 (P14790) ATP synthase membrane subunit DAPIT, mitochondrial × 1 (Q3ZBI7) ATP synthase F(0) complex subunit B1, mitochondrial × 1 (P13619) ATP synthase-coupling factor 6, mitochondrial × 1 (P02721) ATP synthase subunit O, mitochondrial × 1 (P13621) ATP synthase subunit alpha, mitochondrial × 1 (P19483) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name AT5G2_BOVIN
Isoform —
PDB entities 9
Chains and sequence ranges Author chain K; PDBConstruct 1–75; UniProt 69–143 Author chain L; PDBConstruct 1–75; UniProt 69–143 Author chain R; PDBConstruct 1–75; UniProt 69–143

ATP synthase F(0) complex subunit B1, mitochondrial

OrganismNot specified

UniProt P13619

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 15 ATP synthase protein 8 × 1 (P03929) ATP synthase subunit a × 1 (P00847) ATP synthase subunit d, mitochondrial × 1 (P13620) ATP synthase subunit e, mitochondrial × 1 (Q00361) ATP synthase subunit f, mitochondrial × 1 (Q28851) ATP synthase subunit g, mitochondrial × 1 (Q28852) ATP synthase subunit ATP5MPL, mitochondrial × 1 (P14790) ATP synthase membrane subunit DAPIT, mitochondrial × 1 (Q3ZBI7) ATP synthase F(0) complex subunit C2, mitochondrial × 3 (P07926) ATP synthase-coupling factor 6, mitochondrial × 1 (P02721) ATP synthase subunit O, mitochondrial × 1 (P13621) ATP synthase subunit alpha, mitochondrial × 1 (P19483) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name AT5F1_BOVIN
Isoform —
PDB entities 10
Chains and sequence ranges Author chain b; PDBConstruct 1–214; UniProt 43–256

ATP synthase-coupling factor 6, mitochondrial

OrganismNot specified

UniProt P02721

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 15 ATP synthase protein 8 × 1 (P03929) ATP synthase subunit a × 1 (P00847) ATP synthase subunit d, mitochondrial × 1 (P13620) ATP synthase subunit e, mitochondrial × 1 (Q00361) ATP synthase subunit f, mitochondrial × 1 (Q28851) ATP synthase subunit g, mitochondrial × 1 (Q28852) ATP synthase subunit ATP5MPL, mitochondrial × 1 (P14790) ATP synthase membrane subunit DAPIT, mitochondrial × 1 (Q3ZBI7) ATP synthase F(0) complex subunit C2, mitochondrial × 3 (P07926) ATP synthase F(0) complex subunit B1, mitochondrial × 1 (P13619) ATP synthase subunit O, mitochondrial × 1 (P13621) ATP synthase subunit alpha, mitochondrial × 1 (P19483) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATP5J_BOVIN
Isoform —
PDB entities 11
Chains and sequence ranges Author chain h; PDBConstruct 1–76; UniProt 33–108

ATP synthase subunit O, mitochondrial

OrganismNot specified

UniProt P13621

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 15 ATP synthase protein 8 × 1 (P03929) ATP synthase subunit a × 1 (P00847) ATP synthase subunit d, mitochondrial × 1 (P13620) ATP synthase subunit e, mitochondrial × 1 (Q00361) ATP synthase subunit f, mitochondrial × 1 (Q28851) ATP synthase subunit g, mitochondrial × 1 (Q28852) ATP synthase subunit ATP5MPL, mitochondrial × 1 (P14790) ATP synthase membrane subunit DAPIT, mitochondrial × 1 (Q3ZBI7) ATP synthase F(0) complex subunit C2, mitochondrial × 3 (P07926) ATP synthase F(0) complex subunit B1, mitochondrial × 1 (P13619) ATP synthase-coupling factor 6, mitochondrial × 1 (P02721) ATP synthase subunit alpha, mitochondrial × 1 (P19483) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATPO_BOVIN
Isoform —
PDB entities 12
Chains and sequence ranges Author chain S; PDBConstruct 1–190; UniProt 24–213

ATP synthase subunit alpha, mitochondrial

OrganismNot specified

UniProt P19483

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 15 ATP synthase protein 8 × 1 (P03929) ATP synthase subunit a × 1 (P00847) ATP synthase subunit d, mitochondrial × 1 (P13620) ATP synthase subunit e, mitochondrial × 1 (Q00361) ATP synthase subunit f, mitochondrial × 1 (Q28851) ATP synthase subunit g, mitochondrial × 1 (Q28852) ATP synthase subunit ATP5MPL, mitochondrial × 1 (P14790) ATP synthase membrane subunit DAPIT, mitochondrial × 1 (Q3ZBI7) ATP synthase F(0) complex subunit C2, mitochondrial × 3 (P07926) ATP synthase F(0) complex subunit B1, mitochondrial × 1 (P13619) ATP synthase-coupling factor 6, mitochondrial × 1 (P02721) ATP synthase subunit O, mitochondrial × 1 (P13621) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATPA_BOVIN
Isoform —
PDB entities 13
Chains and sequence ranges Author chain C; PDBConstruct 1–510; UniProt 44–553

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id6zit
Deposition date deposition_date2020-06-26
Structure title titlebovine ATP synthase Stator domain, state 2
Keywords keywordsATP synthase, mitochondria, mammalian, complex, HYDROLASE; HYDROLASE
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

6zit__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

6zit__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

6zit__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)71.58 Å
Rg (electron density)72.13 Å
Total Rg72.31 Å
Atom count20683
Residues1298
Excluded volume185590 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 6zit__assembly_1__model_1 pentadecameric (15) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (13)

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6. Fold Classification (SCOP + CATH) 1 domains

CATH v4.4 (1 domains)

Domain ID domain_id6zitC01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology30 — Elongation Factor Tu (Ef-tu); domain 3
Homologous superfamily homologous superfamily20 —
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7. Citations (1)