6ziu

bovine ATP synthase stator domain, state 3

Method: ELECTRON MICROSCOPY

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1. Protein Identity and Related Structures Protein Identity & Related Structures

ATP synthase protein 8

OrganismNot specified

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 11	ATP synthase subunit a × 1 （P00847） ATP synthase subunit d, mitochondrial × 1 （P13620） ATP synthase subunit e, mitochondrial × 1 （Q00361） ATP synthase subunit f, mitochondrial × 1 （Q28851） ATP synthase subunit g, mitochondrial × 1 （Q28852） ATP synthase subunit ATP5MPL, mitochondrial × 1 （P14790） ATP synthase F(0) complex subunit B1, mitochondrial × 1 （P13619） ATP synthase-coupling factor 6, mitochondrial × 1 （P02721） ATP synthase subunit O, mitochondrial × 1 （P13621） ATP synthase subunit alpha, mitochondrial × 1 （P19483）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	ATP8_BOVIN
Isoform	—
PDB entities	1
Chains and sequence ranges	Author chain 8； PDBConstruct 1–66； UniProt 1–66

ATP synthase subunit a

OrganismNot specified

UniProt P00847

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 11	ATP synthase protein 8 × 1 （P03929） ATP synthase subunit d, mitochondrial × 1 （P13620） ATP synthase subunit e, mitochondrial × 1 （Q00361） ATP synthase subunit f, mitochondrial × 1 （Q28851） ATP synthase subunit g, mitochondrial × 1 （Q28852） ATP synthase subunit ATP5MPL, mitochondrial × 1 （P14790） ATP synthase F(0) complex subunit B1, mitochondrial × 1 （P13619） ATP synthase-coupling factor 6, mitochondrial × 1 （P02721） ATP synthase subunit O, mitochondrial × 1 （P13621） ATP synthase subunit alpha, mitochondrial × 1 （P19483）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	ATP6_BOVIN
Isoform	—
PDB entities	2
Chains and sequence ranges	Author chain a； PDBConstruct 1–226； UniProt 1–226

ATP synthase subunit d, mitochondrial

OrganismNot specified

UniProt P13620

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 11	ATP synthase protein 8 × 1 （P03929） ATP synthase subunit a × 1 （P00847） ATP synthase subunit e, mitochondrial × 1 （Q00361） ATP synthase subunit f, mitochondrial × 1 （Q28851） ATP synthase subunit g, mitochondrial × 1 （Q28852） ATP synthase subunit ATP5MPL, mitochondrial × 1 （P14790） ATP synthase F(0) complex subunit B1, mitochondrial × 1 （P13619） ATP synthase-coupling factor 6, mitochondrial × 1 （P02721） ATP synthase subunit O, mitochondrial × 1 （P13621） ATP synthase subunit alpha, mitochondrial × 1 （P19483）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	ATP5H_BOVIN
Isoform	—
PDB entities	3
Chains and sequence ranges	Author chain d； PDBConstruct 1–160； UniProt 2–161

ATP synthase subunit e, mitochondrial

OrganismNot specified

UniProt Q00361

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 11	ATP synthase protein 8 × 1 （P03929） ATP synthase subunit a × 1 （P00847） ATP synthase subunit d, mitochondrial × 1 （P13620） ATP synthase subunit f, mitochondrial × 1 （Q28851） ATP synthase subunit g, mitochondrial × 1 （Q28852） ATP synthase subunit ATP5MPL, mitochondrial × 1 （P14790） ATP synthase F(0) complex subunit B1, mitochondrial × 1 （P13619） ATP synthase-coupling factor 6, mitochondrial × 1 （P02721） ATP synthase subunit O, mitochondrial × 1 （P13621） ATP synthase subunit alpha, mitochondrial × 1 （P19483）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	ATP5I_BOVIN
Isoform	—
PDB entities	4
Chains and sequence ranges	Author chain e； PDBConstruct 1–70； UniProt 2–71

ATP synthase subunit f, mitochondrial

OrganismNot specified

UniProt Q28851

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 11	ATP synthase protein 8 × 1 （P03929） ATP synthase subunit a × 1 （P00847） ATP synthase subunit d, mitochondrial × 1 （P13620） ATP synthase subunit e, mitochondrial × 1 （Q00361） ATP synthase subunit g, mitochondrial × 1 （Q28852） ATP synthase subunit ATP5MPL, mitochondrial × 1 （P14790） ATP synthase F(0) complex subunit B1, mitochondrial × 1 （P13619） ATP synthase-coupling factor 6, mitochondrial × 1 （P02721） ATP synthase subunit O, mitochondrial × 1 （P13621） ATP synthase subunit alpha, mitochondrial × 1 （P19483）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	ATPK_BOVIN
Isoform	—
PDB entities	5
Chains and sequence ranges	Author chain f； PDBConstruct 1–87； UniProt 2–88

ATP synthase subunit g, mitochondrial

OrganismNot specified

UniProt Q28852

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 11	ATP synthase protein 8 × 1 （P03929） ATP synthase subunit a × 1 （P00847） ATP synthase subunit d, mitochondrial × 1 （P13620） ATP synthase subunit e, mitochondrial × 1 （Q00361） ATP synthase subunit f, mitochondrial × 1 （Q28851） ATP synthase subunit ATP5MPL, mitochondrial × 1 （P14790） ATP synthase F(0) complex subunit B1, mitochondrial × 1 （P13619） ATP synthase-coupling factor 6, mitochondrial × 1 （P02721） ATP synthase subunit O, mitochondrial × 1 （P13621） ATP synthase subunit alpha, mitochondrial × 1 （P19483）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	ATP5L_BOVIN
Isoform	—
PDB entities	6
Chains and sequence ranges	Author chain g； PDBConstruct 1–102； UniProt 2–103

ATP synthase subunit ATP5MPL, mitochondrial

OrganismNot specified

UniProt P14790

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 11	ATP synthase protein 8 × 1 （P03929） ATP synthase subunit a × 1 （P00847） ATP synthase subunit d, mitochondrial × 1 （P13620） ATP synthase subunit e, mitochondrial × 1 （Q00361） ATP synthase subunit f, mitochondrial × 1 （Q28851） ATP synthase subunit g, mitochondrial × 1 （Q28852） ATP synthase F(0) complex subunit B1, mitochondrial × 1 （P13619） ATP synthase-coupling factor 6, mitochondrial × 1 （P02721） ATP synthase subunit O, mitochondrial × 1 （P13621） ATP synthase subunit alpha, mitochondrial × 1 （P19483）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	ATP68_BOVIN
Isoform	—
PDB entities	7
Chains and sequence ranges	Author chain j； PDBConstruct 1–60； UniProt 1–60

ATP synthase F(0) complex subunit B1, mitochondrial

OrganismNot specified

UniProt P13619

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 11	ATP synthase protein 8 × 1 （P03929） ATP synthase subunit a × 1 （P00847） ATP synthase subunit d, mitochondrial × 1 （P13620） ATP synthase subunit e, mitochondrial × 1 （Q00361） ATP synthase subunit f, mitochondrial × 1 （Q28851） ATP synthase subunit g, mitochondrial × 1 （Q28852） ATP synthase subunit ATP5MPL, mitochondrial × 1 （P14790） ATP synthase-coupling factor 6, mitochondrial × 1 （P02721） ATP synthase subunit O, mitochondrial × 1 （P13621） ATP synthase subunit alpha, mitochondrial × 1 （P19483）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	AT5F1_BOVIN
Isoform	—
PDB entities	8
Chains and sequence ranges	Author chain b； PDBConstruct 1–214； UniProt 43–256

ATP synthase-coupling factor 6, mitochondrial

OrganismNot specified

UniProt P02721

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 11	ATP synthase protein 8 × 1 （P03929） ATP synthase subunit a × 1 （P00847） ATP synthase subunit d, mitochondrial × 1 （P13620） ATP synthase subunit e, mitochondrial × 1 （Q00361） ATP synthase subunit f, mitochondrial × 1 （Q28851） ATP synthase subunit g, mitochondrial × 1 （Q28852） ATP synthase subunit ATP5MPL, mitochondrial × 1 （P14790） ATP synthase F(0) complex subunit B1, mitochondrial × 1 （P13619） ATP synthase subunit O, mitochondrial × 1 （P13621） ATP synthase subunit alpha, mitochondrial × 1 （P19483）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	ATP5J_BOVIN
Isoform	—
PDB entities	9
Chains and sequence ranges	Author chain h； PDBConstruct 1–76； UniProt 33–108

ATP synthase subunit O, mitochondrial

OrganismNot specified

UniProt P13621

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 11	ATP synthase protein 8 × 1 （P03929） ATP synthase subunit a × 1 （P00847） ATP synthase subunit d, mitochondrial × 1 （P13620） ATP synthase subunit e, mitochondrial × 1 （Q00361） ATP synthase subunit f, mitochondrial × 1 （Q28851） ATP synthase subunit g, mitochondrial × 1 （Q28852） ATP synthase subunit ATP5MPL, mitochondrial × 1 （P14790） ATP synthase F(0) complex subunit B1, mitochondrial × 1 （P13619） ATP synthase-coupling factor 6, mitochondrial × 1 （P02721） ATP synthase subunit alpha, mitochondrial × 1 （P19483）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	ATPO_BOVIN
Isoform	—
PDB entities	10
Chains and sequence ranges	Author chain S； PDBConstruct 1–190； UniProt 24–213

ATP synthase subunit alpha, mitochondrial

OrganismNot specified

UniProt P19483

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein heterocomplex	Heteromer	Protein 11	ATP synthase protein 8 × 1 （P03929） ATP synthase subunit a × 1 （P00847） ATP synthase subunit d, mitochondrial × 1 （P13620） ATP synthase subunit e, mitochondrial × 1 （Q00361） ATP synthase subunit f, mitochondrial × 1 （Q28851） ATP synthase subunit g, mitochondrial × 1 （Q28852） ATP synthase subunit ATP5MPL, mitochondrial × 1 （P14790） ATP synthase F(0) complex subunit B1, mitochondrial × 1 （P13619） ATP synthase-coupling factor 6, mitochondrial × 1 （P02721） ATP synthase subunit O, mitochondrial × 1 （P13621）	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	ATPA_BOVIN
Isoform	—
PDB entities	11
Chains and sequence ranges	Author chain C； PDBConstruct 1–510； UniProt 44–553

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id	6ziu
Deposition date deposition_date	2020-06-26
Structure title title	bovine ATP synthase stator domain, state 3
Keywords keywords	ATP synthase, mitochondria, mammalian, complex, HYDROLASE; HYDROLASE
Experimental Method method	ELECTRON MICROSCOPY

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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

6ziu__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

6ziu__assembly_1__model_1 | I(q)

100 plotted points; both axes use logarithmic scales.

6ziu__assembly_1__model_1 | P(r) · Pending

P(r) will be calculated and displayed separately for the same assembly/model.

Rg（Guinier）	75.22 Å
Rg (electron density)	76.08 Å
Total Rg	76.21 Å
Atom count	18919
Residues	1162
Excluded volume	168760 Å³
Maximum q	0.500 Å⁻¹

Assembly	Model	Structure unit	Oligomeric description	Status	CRYSOL	Actions
1	1	`6ziu__assembly_1__model_1`	undecameric （11）	Success	4.1.3-1-20251215 (887e7ef)	View Download

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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (11)

Entity 1 Entity 1 polymer

Description description	ATP synthase protein 8
Molecular weight formula_weight	7944.5 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	8
Atom count atom_count	18919

MPQLDTSTWLTMILSMFLTLFIIFQLKVSKHNFYHNPELTPTKMLKQNTPWETKWTKIYLPLLLPL

Entity 2 Entity 2 polymer

Description description	ATP synthase subunit a
Molecular weight formula_weight	24801.8 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	a

MNENLFTSFITPVILGLPLVTLIVLFPSLLFPTSNRLVSNRFVTLQQWMLQLVSKQMMSIHNSKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMSISTTTALITFTILILLTILEFAVAMIQAYVFTLLVSLYLHDNT

Entity 3 Entity 3 polymer

Description description	ATP synthase subunit d, mitochondrial
Molecular weight formula_weight	18588.3 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	d

AGRKLALKTIDWVAFGEIIPRNQKAVANSLKSWNETLTSRLATLPEKPPAIDWAYYKANVAKAGLVDDFEKKFNALKVPIPEDKYTAQVDAEEKEDVKSCAEFLTQSKTRIQEYEKELEKMRNIIPFDQMTIEDLNEVFPETKLDKKKYPYWPHRPIETL

Entity 4 Entity 4 polymer

Description description	ATP synthase subunit e, mitochondrial
Molecular weight formula_weight	8205.5 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	e

VPPVQVSPLIKLGRYSALFLGMAYGAKRYNYLKPRAEEERRLAAEEKKKRDEQKRIERELAEAQEDTILK

Entity 5 Entity 5 polymer

Description description	ATP synthase subunit f, mitochondrial
Molecular weight formula_weight	10184.0 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	f

ASVVPLKEKKLLEVKLGELPSWILMRDFTPSGIAGAFQRGYYRYYNKYVNVKKGSIAGLSMVLAAYVFLNYCRSYKELKHERLRKYH

Entity 6 Entity 6 polymer

Description description	ATP synthase subunit g, mitochondrial
Molecular weight formula_weight	11298.2 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	g

AEFVRNLAEKAPALVNAAVTYSKPRLATFWYYAKVELVPPTPAEIPTAIQSLKKIINSAKTGSFKQLTVKEALLNGLVATEVWMWFYVGEIIGKRGIIGYDV

Entity 7 Entity 7 polymer

Description description	ATP synthase subunit ATP5MPL, mitochondrial
Molecular weight formula_weight	6846.1 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	j

MLQSLIKKVWIPMKPYYTQAYQEIWVGTGLMAYIVYKIRSADKRSKALKASSAAPAHGHH

Entity 8 Entity 8 polymer

Description description	ATP synthase F(0) complex subunit B1, mitochondrial
Molecular weight formula_weight	24702.7 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	b

PVPPLPEHGGKVRFGLIPEEFFQFLYPKTGVTGPYVLGTGLILYLLSKEIYVITPETFSAISTIGFLVYIVKKYGASVGEFADKLNEQKIAQLEEVKQASIKQIQDAIDMEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLHRVYREVKNRLDYHISVQNMMRQKEQEHMINWVEKRVVQSISAQQEKETIAKCIADLKLLSKKAQAQPVM

Entity 9 Entity 9 polymer

Description description	ATP synthase-coupling factor 6, mitochondrial
Molecular weight formula_weight	8971.1 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	h

NKELDPVQKLFVDKIREYRTKRQTSGGPVDAGPEYQQDLDRELFKLKQMYGKADMNTFPNFTFEDPKFEVVEKPQS

Entity 10 Entity 10 polymer

Description description	ATP synthase subunit O, mitochondrial
Molecular weight formula_weight	20959.8 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	S

FAKLVRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVGQILKEPKMAASLLNPYVKRSVKVKSLSDMTAKEKFSPLTSNLINLLAENGRLTNTPAVISAFSTMMSVHRGEVPCTVTTASALDEATLTELKTVLKSFLSKGQVLKLEVKIDPSIMGGMIVRIGEKYVDMSAKTKIQKLSRAMREIL

Entity 11 Entity 11 polymer

Description description	ATP synthase subunit alpha, mitochondrial
Molecular weight formula_weight	55332.2 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	C

EKTGTAEVSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKARRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVISQHQALLSKIRTDGKISEESDAKLKEIVTNFLAGFEA

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Unit-cell length a length_a	1.000 Å
Unit-cell length b length_b	1.000 Å
Unit-cell length c length_c	1.000 Å
Unit-cell angle α angle_alpha	90.00 °
Unit-cell angle β angle_beta	90.00 °
Unit-cell angle γ angle_gamma	90.00 °
Molecules per unit cell Z z_pdb	—

Space group space_group	P 1
Space-group number int_tables_number	1
Crystal system crystal_system	triclinic

Resolution resolution	6.02 Å
Resolution测定Method resolution_method	—
颗粒数 num_particles	61458

bovine ATP synthase stator domain, state 3

1. Protein Identity and Related Structures Protein Identity & Related Structures

ATP synthase protein 8

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

ATP synthase subunit a

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

ATP synthase subunit d, mitochondrial

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

ATP synthase subunit e, mitochondrial

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

ATP synthase subunit f, mitochondrial

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

ATP synthase subunit g, mitochondrial

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

ATP synthase subunit ATP5MPL, mitochondrial

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

ATP synthase F(0) complex subunit B1, mitochondrial

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

ATP synthase-coupling factor 6, mitochondrial

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

ATP synthase subunit O, mitochondrial

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer