2wss

The structure of the membrane extrinsic region of bovine ATP synthase

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL

OrganismNot specified

UniProt P19483

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL × 3 (P00829) ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL × 1 (P05631) ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL × 1 (P05630) ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL × 1 (P05632) ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL × 1 (P13621) ATP SYNTHASE SUBUNIT B, MITOCHONDRIAL × 1 (P13619) ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL × 1 (P13620) ATP SYNTHASE-COUPLING FACTOR 6, MITOCHONDRIAL × 1 (P02721) PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 MAGNESIUM ION × 5 ADENOSINE-5'-DIPHOSPHATE × 1 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 12 ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL × 3 (P00829) ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL × 1 (P05631) ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL × 1 (P05630) ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL × 1 (P05632) ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL × 1 (P13621) ATP SYNTHASE SUBUNIT B, MITOCHONDRIAL × 1 (P13619) ATP SYNTHASE-COUPLING FACTOR 6, MITOCHONDRIAL × 1 (P02721) PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 MAGNESIUM ION × 5 ADENOSINE-5'-DIPHOSPHATE × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATPA_BOVIN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–510; UniProt 44–553 Author chain B; PDBConstruct 1–510; UniProt 44–553 Author chain C; PDBConstruct 1–510; UniProt 44–553 Author chain J; PDBConstruct 1–510; UniProt 44–553 Author chain K; PDBConstruct 1–510; UniProt 44–553 Author chain L; PDBConstruct 1–510; UniProt 44–553

ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL

OrganismNot specified

UniProt P00829

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL × 3 (P19483) ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL × 1 (P05631) ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL × 1 (P05630) ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL × 1 (P05632) ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL × 1 (P13621) ATP SYNTHASE SUBUNIT B, MITOCHONDRIAL × 1 (P13619) ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL × 1 (P13620) ATP SYNTHASE-COUPLING FACTOR 6, MITOCHONDRIAL × 1 (P02721) PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 MAGNESIUM ION × 5 ADENOSINE-5'-DIPHOSPHATE × 1 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 12 ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL × 3 (P19483) ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL × 1 (P05631) ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL × 1 (P05630) ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL × 1 (P05632) ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL × 1 (P13621) ATP SYNTHASE SUBUNIT B, MITOCHONDRIAL × 1 (P13619) ATP SYNTHASE-COUPLING FACTOR 6, MITOCHONDRIAL × 1 (P02721) PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 MAGNESIUM ION × 5 ADENOSINE-5'-DIPHOSPHATE × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATPB_BOVIN
Isoform —
PDB entities 2
Chains and sequence ranges Author chain D; PDBConstruct 1–482; UniProt 47–528 Author chain E; PDBConstruct 1–482; UniProt 47–528 Author chain F; PDBConstruct 1–482; UniProt 47–528 Author chain M; PDBConstruct 1–482; UniProt 47–528 Author chain N; PDBConstruct 1–482; UniProt 47–528 Author chain O; PDBConstruct 1–482; UniProt 47–528

ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL

OrganismNot specified

UniProt P05631

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL × 3 (P19483) ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL × 3 (P00829) ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL × 1 (P05630) ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL × 1 (P05632) ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL × 1 (P13621) ATP SYNTHASE SUBUNIT B, MITOCHONDRIAL × 1 (P13619) ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL × 1 (P13620) ATP SYNTHASE-COUPLING FACTOR 6, MITOCHONDRIAL × 1 (P02721) PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 MAGNESIUM ION × 5 ADENOSINE-5'-DIPHOSPHATE × 1 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 12 ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL × 3 (P19483) ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL × 3 (P00829) ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL × 1 (P05630) ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL × 1 (P05632) ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL × 1 (P13621) ATP SYNTHASE SUBUNIT B, MITOCHONDRIAL × 1 (P13619) ATP SYNTHASE-COUPLING FACTOR 6, MITOCHONDRIAL × 1 (P02721) PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 MAGNESIUM ION × 5 ADENOSINE-5'-DIPHOSPHATE × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATPG_BOVIN
Isoform —
PDB entities 3
Chains and sequence ranges Author chain G; PDBConstruct 1–272; UniProt 26–297 Author chain P; PDBConstruct 1–272; UniProt 26–297

ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL

OrganismNot specified

UniProt P05630

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL × 3 (P19483) ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL × 3 (P00829) ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL × 1 (P05631) ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL × 1 (P05632) ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL × 1 (P13621) ATP SYNTHASE SUBUNIT B, MITOCHONDRIAL × 1 (P13619) ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL × 1 (P13620) ATP SYNTHASE-COUPLING FACTOR 6, MITOCHONDRIAL × 1 (P02721) PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 MAGNESIUM ION × 5 ADENOSINE-5'-DIPHOSPHATE × 1 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 12 ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL × 3 (P19483) ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL × 3 (P00829) ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL × 1 (P05631) ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL × 1 (P05632) ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL × 1 (P13621) ATP SYNTHASE SUBUNIT B, MITOCHONDRIAL × 1 (P13619) ATP SYNTHASE-COUPLING FACTOR 6, MITOCHONDRIAL × 1 (P02721) PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 MAGNESIUM ION × 5 ADENOSINE-5'-DIPHOSPHATE × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATPD_BOVIN
Isoform —
PDB entities 4
Chains and sequence ranges Author chain H; PDBConstruct 1–146; UniProt 23–168 Author chain Q; PDBConstruct 1–146; UniProt 23–168

ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL

OrganismNot specified

UniProt P05632

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL × 3 (P19483) ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL × 3 (P00829) ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL × 1 (P05631) ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL × 1 (P05630) ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL × 1 (P13621) ATP SYNTHASE SUBUNIT B, MITOCHONDRIAL × 1 (P13619) ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL × 1 (P13620) ATP SYNTHASE-COUPLING FACTOR 6, MITOCHONDRIAL × 1 (P02721) PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 MAGNESIUM ION × 5 ADENOSINE-5'-DIPHOSPHATE × 1 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 12 ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL × 3 (P19483) ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL × 3 (P00829) ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL × 1 (P05631) ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL × 1 (P05630) ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL × 1 (P13621) ATP SYNTHASE SUBUNIT B, MITOCHONDRIAL × 1 (P13619) ATP SYNTHASE-COUPLING FACTOR 6, MITOCHONDRIAL × 1 (P02721) PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 MAGNESIUM ION × 5 ADENOSINE-5'-DIPHOSPHATE × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATP5E_BOVIN
Isoform —
PDB entities 5
Chains and sequence ranges Author chain I; PDBConstruct 1–50; UniProt 2–51 Author chain R; PDBConstruct 1–50; UniProt 2–51

ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL

BOS TAURUS

UniProt P13621

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL × 3 (P19483) ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL × 3 (P00829) ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL × 1 (P05631) ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL × 1 (P05630) ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL × 1 (P05632) ATP SYNTHASE SUBUNIT B, MITOCHONDRIAL × 1 (P13619) ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL × 1 (P13620) ATP SYNTHASE-COUPLING FACTOR 6, MITOCHONDRIAL × 1 (P02721) PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 MAGNESIUM ION × 5 ADENOSINE-5'-DIPHOSPHATE × 1 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 12 ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL × 3 (P19483) ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL × 3 (P00829) ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL × 1 (P05631) ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL × 1 (P05630) ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL × 1 (P05632) ATP SYNTHASE SUBUNIT B, MITOCHONDRIAL × 1 (P13619) ATP SYNTHASE-COUPLING FACTOR 6, MITOCHONDRIAL × 1 (P02721) PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 MAGNESIUM ION × 5 ADENOSINE-5'-DIPHOSPHATE × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATPO_BOVIN
Isoform —
PDB entities 6
Chains and sequence ranges Author chain S; PDBConstruct 1–190; UniProt 24–213 Author chain W; PDBConstruct 1–190; UniProt 24–213

ATP SYNTHASE SUBUNIT B, MITOCHONDRIAL

BOS TAURUS

UniProt P13619

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL × 3 (P19483) ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL × 3 (P00829) ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL × 1 (P05631) ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL × 1 (P05630) ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL × 1 (P05632) ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL × 1 (P13621) ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL × 1 (P13620) ATP SYNTHASE-COUPLING FACTOR 6, MITOCHONDRIAL × 1 (P02721) PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 MAGNESIUM ION × 5 ADENOSINE-5'-DIPHOSPHATE × 1 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 12 ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL × 3 (P19483) ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL × 3 (P00829) ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL × 1 (P05631) ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL × 1 (P05630) ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL × 1 (P05632) ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL × 1 (P13621) ATP SYNTHASE-COUPLING FACTOR 6, MITOCHONDRIAL × 1 (P02721) PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 MAGNESIUM ION × 5 ADENOSINE-5'-DIPHOSPHATE × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name AT5F1_BOVIN
Isoform —
PDB entities 7
Chains and sequence ranges Author chain T; PDBConstruct 1–116; UniProt 141–256 Author chain X; PDBConstruct 1–116; UniProt 141–256

ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL

BOS TAURUS

UniProt P13620

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL × 3 (P19483) ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL × 3 (P00829) ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL × 1 (P05631) ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL × 1 (P05630) ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL × 1 (P05632) ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL × 1 (P13621) ATP SYNTHASE SUBUNIT B, MITOCHONDRIAL × 1 (P13619) ATP SYNTHASE-COUPLING FACTOR 6, MITOCHONDRIAL × 1 (P02721) PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 MAGNESIUM ION × 5 ADENOSINE-5'-DIPHOSPHATE × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATP5H_BOVIN
Isoform —
PDB entities 8
Chains and sequence ranges Author chain U; PDBConstruct 1–118; UniProt 2–119

ATP SYNTHASE-COUPLING FACTOR 6, MITOCHONDRIAL

BOS TAURUS

UniProt P02721

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL × 3 (P19483) ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL × 3 (P00829) ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL × 1 (P05631) ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL × 1 (P05630) ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL × 1 (P05632) ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL × 1 (P13621) ATP SYNTHASE SUBUNIT B, MITOCHONDRIAL × 1 (P13619) ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL × 1 (P13620) PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 MAGNESIUM ION × 5 ADENOSINE-5'-DIPHOSPHATE × 1 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 12 ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL × 3 (P19483) ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL × 3 (P00829) ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL × 1 (P05631) ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL × 1 (P05630) ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL × 1 (P05632) ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL × 1 (P13621) ATP SYNTHASE SUBUNIT B, MITOCHONDRIAL × 1 (P13619) PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 MAGNESIUM ION × 5 ADENOSINE-5'-DIPHOSPHATE × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ATP5J_BOVIN
Isoform —
PDB entities 9
Chains and sequence ranges Author chain V; PDBConstruct 1–76; UniProt 33–108 Author chain Z; PDBConstruct 1–76; UniProt 33–108

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id2wss
Deposition date deposition_date2009-09-09
Structure title titleThe structure of the membrane extrinsic region of bovine ATP synthase
Keywords keywords;HYDROGEN ION TRANSPORT, ATP SYNTHESIS, PHOSPHOPROTEIN, UBL CONJUGATION, TRANSIT PEPTIDE, NUCLEOTIDE-BINDING, ACETYLATION, ATP-BINDING, ION TRANSPORT, MITOCHONDRION, PYRROLIDONE CARBOXYLIC ACID, HYDROLASE, TRANSPORT ;; HYDROLASE
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

2wss__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

2wss__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

2wss__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)47.46 Å
Rg (electron density)46.86 Å
Total Rg47.18 Å
Atom count28160
Residues3646
Excluded volume504030 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 2wss__assembly_1__model_1 tridecameric (13) Success 4.1.3-1-20251215 (887e7ef) View Download
2 1 2wss__assembly_2__model_1 dodecameric (12) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (12)

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6. Fold Classification (SCOP + CATH) 50 domains

CATH v4.4 (50 domains)

Domain ID domain_id2wssA01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology30 — Elongation Factor Tu (Ef-tu); domain 3
Homologous superfamily homologous superfamily20 —
Domain ID domain_id2wssA02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id2wssA03
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology150 — Lysin
Homologous superfamily homologous superfamily20 — ATP synthase alpha/beta chain, C-terminal domain
Domain ID domain_id2wssB01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology30 — Elongation Factor Tu (Ef-tu); domain 3
Homologous superfamily homologous superfamily20 —
Domain ID domain_id2wssB02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id2wssB03
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology150 — Lysin
Homologous superfamily homologous superfamily20 — ATP synthase alpha/beta chain, C-terminal domain
Domain ID domain_id2wssC01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology30 — Elongation Factor Tu (Ef-tu); domain 3
Homologous superfamily homologous superfamily20 —
Domain ID domain_id2wssC02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id2wssC03
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology150 — Lysin
Homologous superfamily homologous superfamily20 — ATP synthase alpha/beta chain, C-terminal domain
Domain ID domain_id2wssD01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology10 — Thrombin, subunit H
Homologous superfamily homologous superfamily170 —
Domain ID domain_id2wssD02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id2wssD03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology1140 — Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3
Homologous superfamily homologous superfamily10 — Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
Domain ID domain_id2wssE01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology10 — Thrombin, subunit H
Homologous superfamily homologous superfamily170 —
Domain ID domain_id2wssE02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id2wssE03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology1140 — Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3
Homologous superfamily homologous superfamily10 — Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
Domain ID domain_id2wssF01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology10 — Thrombin, subunit H
Homologous superfamily homologous superfamily170 —
Domain ID domain_id2wssF02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id2wssF03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology1140 — Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3
Homologous superfamily homologous superfamily10 — Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
Domain ID domain_id2wssG01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology287 — Helix Hairpins
Homologous superfamily homologous superfamily80 — ATP synthase, gamma subunit, helix hairpin domain
Domain ID domain_id2wssG02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology1380 — Pyruvate Kinase; Chain: A, domain 1
Homologous superfamily homologous superfamily10 — ATP synthase, F1 complex, gamma subunit
Domain ID domain_id2wssH01
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology15 — ATP Synthase; domain 1
Homologous superfamily homologous superfamily10 — F0F1 ATP synthase delta/epsilon subunit, N-terminal
Domain ID domain_id2wssH02
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology5 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces
Homologous superfamily homologous superfamily440 — ATP synthase delta/epsilon subunit, C-terminal domain
Domain ID domain_id2wssI00
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology1620 — Atp Synthase Epsilon Chain; Chain: I;
Homologous superfamily homologous superfamily20 — ATP synthase, F1 complex, epsilon subunit superfamily, mitochondrial
Domain ID domain_id2wssJ01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology30 — Elongation Factor Tu (Ef-tu); domain 3
Homologous superfamily homologous superfamily20 —
Domain ID domain_id2wssJ02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id2wssJ03
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology150 — Lysin
Homologous superfamily homologous superfamily20 — ATP synthase alpha/beta chain, C-terminal domain
Domain ID domain_id2wssK01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology30 — Elongation Factor Tu (Ef-tu); domain 3
Homologous superfamily homologous superfamily20 —
Domain ID domain_id2wssK02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id2wssK03
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology150 — Lysin
Homologous superfamily homologous superfamily20 — ATP synthase alpha/beta chain, C-terminal domain
Domain ID domain_id2wssL01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology30 — Elongation Factor Tu (Ef-tu); domain 3
Homologous superfamily homologous superfamily20 —
Domain ID domain_id2wssL02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id2wssL03
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology150 — Lysin
Homologous superfamily homologous superfamily20 — ATP synthase alpha/beta chain, C-terminal domain
Domain ID domain_id2wssM01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology10 — Thrombin, subunit H
Homologous superfamily homologous superfamily170 —
Domain ID domain_id2wssM02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id2wssM03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology1140 — Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3
Homologous superfamily homologous superfamily10 — Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
Domain ID domain_id2wssN01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology10 — Thrombin, subunit H
Homologous superfamily homologous superfamily170 —
Domain ID domain_id2wssN02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id2wssN03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology1140 — Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3
Homologous superfamily homologous superfamily10 — Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
Domain ID domain_id2wssO01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology10 — Thrombin, subunit H
Homologous superfamily homologous superfamily170 —
Domain ID domain_id2wssO02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology50 — Rossmann fold
Homologous superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
Domain ID domain_id2wssO03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology1140 — Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3
Homologous superfamily homologous superfamily10 — Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
Domain ID domain_id2wssP01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology287 — Helix Hairpins
Homologous superfamily homologous superfamily80 — ATP synthase, gamma subunit, helix hairpin domain
Domain ID domain_id2wssP02
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology1380 — Pyruvate Kinase; Chain: A, domain 1
Homologous superfamily homologous superfamily10 — ATP synthase, F1 complex, gamma subunit
Domain ID domain_id2wssQ01
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology15 — ATP Synthase; domain 1
Homologous superfamily homologous superfamily10 — F0F1 ATP synthase delta/epsilon subunit, N-terminal
Domain ID domain_id2wssQ02
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology5 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces
Homologous superfamily homologous superfamily440 — ATP synthase delta/epsilon subunit, C-terminal domain
Domain ID domain_id2wssR00
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology1620 — Atp Synthase Epsilon Chain; Chain: I;
Homologous superfamily homologous superfamily20 — ATP synthase, F1 complex, epsilon subunit superfamily, mitochondrial
Domain ID domain_id2wssS01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology520 — Peroxidase; domain 1
Homologous superfamily homologous superfamily20 — N-terminal domain of the delta subunit of the F1F0-ATP synthase
Domain ID domain_id2wssT00
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology5 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces
Homologous superfamily homologous superfamily2210 —
Domain ID domain_id2wssV01
Class class6 — Special
Architecture architecture10 — Helix non-globular
Topology topology280 — Methane Monooxygenase Hydroxylase; Chain G, domain 1
Homologous superfamily homologous superfamily200 —
Domain ID domain_id2wssW01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology520 — Peroxidase; domain 1
Homologous superfamily homologous superfamily20 — N-terminal domain of the delta subunit of the F1F0-ATP synthase
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7. Citations (1)