9hvq

Structure of the transcribing Pol II-DSIF-PAF-SPT6-RECQL5 complex

Method: ELECTRON MICROSCOPY
▼

1. 蛋白身份与相关结构 Protein Identity & Related Structures

DNA-directed RNA polymerase subunit

物种未注明

UniProt A0A8D1DPV6

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 21 DNA 2 RNA 1 DNA-directed RNA polymerase subunit beta × 1 (A0A0B8RVL1) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RNA polymerase II subunit D × 1 (A0A4X1VM56) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase subunit × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (I3LCB2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) DNA-directed RNA polymerase II subunit RPB11-a × 1 (F1RKE4) RNA polymerase II, I and III subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 (Q7KZ85) Non-template DNA × 1 ATP-dependent DNA helicase Q5 × 1 (O94762) RNA × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) Template DNA × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WD repeat-containing protein 61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) ZINC ION × 8 MAGNESIUM ION × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A8D1DPV6_PIG
Isoform —
PDB实体 1
链与序列区间 作者链 A; PDB构建体 1–1970; UniProt 1–1970

DNA-directed RNA polymerase subunit beta

物种未注明

UniProt A0A0B8RVL1

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 21 DNA 2 RNA 1 DNA-directed RNA polymerase subunit × 1 (A0A8D1DPV6) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RNA polymerase II subunit D × 1 (A0A4X1VM56) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase subunit × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (I3LCB2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) DNA-directed RNA polymerase II subunit RPB11-a × 1 (F1RKE4) RNA polymerase II, I and III subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 (Q7KZ85) Non-template DNA × 1 ATP-dependent DNA helicase Q5 × 1 (O94762) RNA × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) Template DNA × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WD repeat-containing protein 61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) ZINC ION × 8 MAGNESIUM ION × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A0B8RVL1_PIG
Isoform —
PDB实体 2
链与序列区间 作者链 B; PDB构建体 1–1174; UniProt 1–1174

DNA-directed RNA polymerase II subunit RPB3

物种未注明

UniProt I3LCH3

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 21 DNA 2 RNA 1 DNA-directed RNA polymerase subunit × 1 (A0A8D1DPV6) DNA-directed RNA polymerase subunit beta × 1 (A0A0B8RVL1) RNA polymerase II subunit D × 1 (A0A4X1VM56) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase subunit × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (I3LCB2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) DNA-directed RNA polymerase II subunit RPB11-a × 1 (F1RKE4) RNA polymerase II, I and III subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 (Q7KZ85) Non-template DNA × 1 ATP-dependent DNA helicase Q5 × 1 (O94762) RNA × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) Template DNA × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WD repeat-containing protein 61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) ZINC ION × 8 MAGNESIUM ION × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 I3LCH3_PIG
Isoform —
PDB实体 3
链与序列区间 作者链 C; PDB构建体 1–275; UniProt 1–275

RNA polymerase II subunit D

物种未注明

UniProt A0A4X1VM56

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 21 DNA 2 RNA 1 DNA-directed RNA polymerase subunit × 1 (A0A8D1DPV6) DNA-directed RNA polymerase subunit beta × 1 (A0A0B8RVL1) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase subunit × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (I3LCB2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) DNA-directed RNA polymerase II subunit RPB11-a × 1 (F1RKE4) RNA polymerase II, I and III subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 (Q7KZ85) Non-template DNA × 1 ATP-dependent DNA helicase Q5 × 1 (O94762) RNA × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) Template DNA × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WD repeat-containing protein 61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) ZINC ION × 8 MAGNESIUM ION × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A4X1VM56_PIG
Isoform —
PDB实体 4
链与序列区间 作者链 D; PDB构建体 1–142; UniProt 1–142

DNA-directed RNA polymerase II subunit E

物种未注明

UniProt I3LSI7

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 21 DNA 2 RNA 1 DNA-directed RNA polymerase subunit × 1 (A0A8D1DPV6) DNA-directed RNA polymerase subunit beta × 1 (A0A0B8RVL1) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RNA polymerase II subunit D × 1 (A0A4X1VM56) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase subunit × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (I3LCB2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) DNA-directed RNA polymerase II subunit RPB11-a × 1 (F1RKE4) RNA polymerase II, I and III subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 (Q7KZ85) Non-template DNA × 1 ATP-dependent DNA helicase Q5 × 1 (O94762) RNA × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) Template DNA × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WD repeat-containing protein 61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) ZINC ION × 8 MAGNESIUM ION × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 I3LSI7_PIG
Isoform —
PDB实体 5
链与序列区间 作者链 E; PDB构建体 1–210; UniProt 1–210

DNA-directed RNA polymerases I, II, and III subunit RPABC2

物种未注明

UniProt A0A4X1VEK9

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 21 DNA 2 RNA 1 DNA-directed RNA polymerase subunit × 1 (A0A8D1DPV6) DNA-directed RNA polymerase subunit beta × 1 (A0A0B8RVL1) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RNA polymerase II subunit D × 1 (A0A4X1VM56) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerase subunit × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (I3LCB2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) DNA-directed RNA polymerase II subunit RPB11-a × 1 (F1RKE4) RNA polymerase II, I and III subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 (Q7KZ85) Non-template DNA × 1 ATP-dependent DNA helicase Q5 × 1 (O94762) RNA × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) Template DNA × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WD repeat-containing protein 61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) ZINC ION × 8 MAGNESIUM ION × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A4X1VEK9_PIG
Isoform —
PDB实体 6
链与序列区间 作者链 F; PDB构建体 1–127; UniProt 1–127

DNA-directed RNA polymerase subunit

物种未注明

UniProt A0A4X1VKG7

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 21 DNA 2 RNA 1 DNA-directed RNA polymerase subunit × 1 (A0A8D1DPV6) DNA-directed RNA polymerase subunit beta × 1 (A0A0B8RVL1) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RNA polymerase II subunit D × 1 (A0A4X1VM56) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (I3LCB2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) DNA-directed RNA polymerase II subunit RPB11-a × 1 (F1RKE4) RNA polymerase II, I and III subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 (Q7KZ85) Non-template DNA × 1 ATP-dependent DNA helicase Q5 × 1 (O94762) RNA × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) Template DNA × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WD repeat-containing protein 61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) ZINC ION × 8 MAGNESIUM ION × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A4X1VKG7_PIG
Isoform —
PDB实体 7
链与序列区间 作者链 G; PDB构建体 1–172; UniProt 1–172

DNA-directed RNA polymerases I, II, and III subunit RPABC3

物种未注明

UniProt I3LCB2

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 21 DNA 2 RNA 1 DNA-directed RNA polymerase subunit × 1 (A0A8D1DPV6) DNA-directed RNA polymerase subunit beta × 1 (A0A0B8RVL1) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RNA polymerase II subunit D × 1 (A0A4X1VM56) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase subunit × 1 (A0A4X1VKG7) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) DNA-directed RNA polymerase II subunit RPB11-a × 1 (F1RKE4) RNA polymerase II, I and III subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 (Q7KZ85) Non-template DNA × 1 ATP-dependent DNA helicase Q5 × 1 (O94762) RNA × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) Template DNA × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WD repeat-containing protein 61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) ZINC ION × 8 MAGNESIUM ION × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 I3LCB2_PIG
Isoform —
PDB实体 8
链与序列区间 作者链 H; PDB构建体 1–150; UniProt 1–150

DNA-directed RNA polymerase II subunit RPB9

物种未注明

UniProt P60899

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 21 DNA 2 RNA 1 DNA-directed RNA polymerase subunit × 1 (A0A8D1DPV6) DNA-directed RNA polymerase subunit beta × 1 (A0A0B8RVL1) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RNA polymerase II subunit D × 1 (A0A4X1VM56) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase subunit × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (I3LCB2) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) DNA-directed RNA polymerase II subunit RPB11-a × 1 (F1RKE4) RNA polymerase II, I and III subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 (Q7KZ85) Non-template DNA × 1 ATP-dependent DNA helicase Q5 × 1 (O94762) RNA × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) Template DNA × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WD repeat-containing protein 61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) ZINC ION × 8 MAGNESIUM ION × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 RPB9_PIG
Isoform —
PDB实体 9
链与序列区间 作者链 I; PDB构建体 1–125; UniProt 1–125

DNA-directed RNA polymerases I, II, and III subunit RPABC5

物种未注明

UniProt A0A4X1VYD0

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 21 DNA 2 RNA 1 DNA-directed RNA polymerase subunit × 1 (A0A8D1DPV6) DNA-directed RNA polymerase subunit beta × 1 (A0A0B8RVL1) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RNA polymerase II subunit D × 1 (A0A4X1VM56) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase subunit × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (I3LCB2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerase II subunit RPB11-a × 1 (F1RKE4) RNA polymerase II, I and III subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 (Q7KZ85) Non-template DNA × 1 ATP-dependent DNA helicase Q5 × 1 (O94762) RNA × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) Template DNA × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WD repeat-containing protein 61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) ZINC ION × 8 MAGNESIUM ION × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A4X1VYD0_PIG
Isoform —
PDB实体 10
链与序列区间 作者链 J; PDB构建体 1–67; UniProt 1–67

DNA-directed RNA polymerase II subunit RPB11-a

物种未注明

UniProt F1RKE4

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 21 DNA 2 RNA 1 DNA-directed RNA polymerase subunit × 1 (A0A8D1DPV6) DNA-directed RNA polymerase subunit beta × 1 (A0A0B8RVL1) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RNA polymerase II subunit D × 1 (A0A4X1VM56) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase subunit × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (I3LCB2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) RNA polymerase II, I and III subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 (Q7KZ85) Non-template DNA × 1 ATP-dependent DNA helicase Q5 × 1 (O94762) RNA × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) Template DNA × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WD repeat-containing protein 61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) ZINC ION × 8 MAGNESIUM ION × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 F1RKE4_PIG
Isoform —
PDB实体 11
链与序列区间 作者链 K; PDB构建体 1–117; UniProt 1–117

RNA polymerase II, I and III subunit K

物种未注明

UniProt A0A4X1TRS6

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 21 DNA 2 RNA 1 DNA-directed RNA polymerase subunit × 1 (A0A8D1DPV6) DNA-directed RNA polymerase subunit beta × 1 (A0A0B8RVL1) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RNA polymerase II subunit D × 1 (A0A4X1VM56) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase subunit × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (I3LCB2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) DNA-directed RNA polymerase II subunit RPB11-a × 1 (F1RKE4) Transcription elongation factor SPT6 × 1 (Q7KZ85) Non-template DNA × 1 ATP-dependent DNA helicase Q5 × 1 (O94762) RNA × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) Template DNA × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WD repeat-containing protein 61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) ZINC ION × 8 MAGNESIUM ION × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A4X1TRS6_PIG
Isoform —
PDB实体 12
链与序列区间 作者链 L; PDB构建体 1–58; UniProt 1–58

Transcription elongation factor SPT6

Homo sapiens

UniProt Q7KZ85

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 21 DNA 2 RNA 1 DNA-directed RNA polymerase subunit × 1 (A0A8D1DPV6) DNA-directed RNA polymerase subunit beta × 1 (A0A0B8RVL1) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RNA polymerase II subunit D × 1 (A0A4X1VM56) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase subunit × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (I3LCB2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) DNA-directed RNA polymerase II subunit RPB11-a × 1 (F1RKE4) RNA polymerase II, I and III subunit K × 1 (A0A4X1TRS6) Non-template DNA × 1 ATP-dependent DNA helicase Q5 × 1 (O94762) RNA × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) Template DNA × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WD repeat-containing protein 61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) ZINC ION × 8 MAGNESIUM ION × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 SPT6H_HUMAN
Isoform —
PDB实体 13
链与序列区间 作者链 M; PDB构建体 1–1726; UniProt 1–1726

ATP-dependent DNA helicase Q5

Homo sapiens

UniProt O94762

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 21 DNA 2 RNA 1 DNA-directed RNA polymerase subunit × 1 (A0A8D1DPV6) DNA-directed RNA polymerase subunit beta × 1 (A0A0B8RVL1) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RNA polymerase II subunit D × 1 (A0A4X1VM56) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase subunit × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (I3LCB2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) DNA-directed RNA polymerase II subunit RPB11-a × 1 (F1RKE4) RNA polymerase II, I and III subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 (Q7KZ85) Non-template DNA × 1 RNA × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) Template DNA × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WD repeat-containing protein 61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) ZINC ION × 8 MAGNESIUM ION × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 RECQ5_HUMAN
Isoform —
PDB实体 15
链与序列区间 作者链 O; PDB构建体 1–991; UniProt 1–991

RNA polymerase-associated protein CTR9 homolog

Homo sapiens

UniProt Q6PD62

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 21 DNA 2 RNA 1 DNA-directed RNA polymerase subunit × 1 (A0A8D1DPV6) DNA-directed RNA polymerase subunit beta × 1 (A0A0B8RVL1) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RNA polymerase II subunit D × 1 (A0A4X1VM56) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase subunit × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (I3LCB2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) DNA-directed RNA polymerase II subunit RPB11-a × 1 (F1RKE4) RNA polymerase II, I and III subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 (Q7KZ85) Non-template DNA × 1 ATP-dependent DNA helicase Q5 × 1 (O94762) RNA × 1 Template DNA × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WD repeat-containing protein 61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) ZINC ION × 8 MAGNESIUM ION × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 CTR9_HUMAN
Isoform —
PDB实体 17
链与序列区间 作者链 Q; PDB构建体 1–1173; UniProt 1–1173

RNA polymerase-associated protein LEO1

Homo sapiens

UniProt Q8WVC0

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 21 DNA 2 RNA 1 DNA-directed RNA polymerase subunit × 1 (A0A8D1DPV6) DNA-directed RNA polymerase subunit beta × 1 (A0A0B8RVL1) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RNA polymerase II subunit D × 1 (A0A4X1VM56) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase subunit × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (I3LCB2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) DNA-directed RNA polymerase II subunit RPB11-a × 1 (F1RKE4) RNA polymerase II, I and III subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 (Q7KZ85) Non-template DNA × 1 ATP-dependent DNA helicase Q5 × 1 (O94762) RNA × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) Template DNA × 1 RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WD repeat-containing protein 61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) ZINC ION × 8 MAGNESIUM ION × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 LEO1_HUMAN
Isoform —
PDB实体 19
链与序列区间 作者链 U; PDB构建体 1–666; UniProt 1–666

RNA polymerase II-associated factor 1 homolog

Homo sapiens

UniProt Q8N7H5

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 21 DNA 2 RNA 1 DNA-directed RNA polymerase subunit × 1 (A0A8D1DPV6) DNA-directed RNA polymerase subunit beta × 1 (A0A0B8RVL1) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RNA polymerase II subunit D × 1 (A0A4X1VM56) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase subunit × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (I3LCB2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) DNA-directed RNA polymerase II subunit RPB11-a × 1 (F1RKE4) RNA polymerase II, I and III subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 (Q7KZ85) Non-template DNA × 1 ATP-dependent DNA helicase Q5 × 1 (O94762) RNA × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) Template DNA × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) WD repeat-containing protein 61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) ZINC ION × 8 MAGNESIUM ION × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 PAF1_HUMAN
Isoform —
PDB实体 20
链与序列区间 作者链 V; PDB构建体 1–531; UniProt 1–531

WD repeat-containing protein 61

Homo sapiens

UniProt Q9GZS3

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 21 DNA 2 RNA 1 DNA-directed RNA polymerase subunit × 1 (A0A8D1DPV6) DNA-directed RNA polymerase subunit beta × 1 (A0A0B8RVL1) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RNA polymerase II subunit D × 1 (A0A4X1VM56) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase subunit × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (I3LCB2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) DNA-directed RNA polymerase II subunit RPB11-a × 1 (F1RKE4) RNA polymerase II, I and III subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 (Q7KZ85) Non-template DNA × 1 ATP-dependent DNA helicase Q5 × 1 (O94762) RNA × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) Template DNA × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) ZINC ION × 8 MAGNESIUM ION × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 WDR61_HUMAN
Isoform —
PDB实体 21
链与序列区间 作者链 W; PDB构建体 1–305; UniProt 1–305

Parafibromin

Homo sapiens

UniProt Q6P1J9

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 21 DNA 2 RNA 1 DNA-directed RNA polymerase subunit × 1 (A0A8D1DPV6) DNA-directed RNA polymerase subunit beta × 1 (A0A0B8RVL1) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RNA polymerase II subunit D × 1 (A0A4X1VM56) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase subunit × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (I3LCB2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) DNA-directed RNA polymerase II subunit RPB11-a × 1 (F1RKE4) RNA polymerase II, I and III subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 (Q7KZ85) Non-template DNA × 1 ATP-dependent DNA helicase Q5 × 1 (O94762) RNA × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) Template DNA × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WD repeat-containing protein 61 × 1 (Q9GZS3) Transcription elongation factor SPT4 × 1 (P63272) Transcription elongation factor SPT5 × 1 (O00267) ZINC ION × 8 MAGNESIUM ION × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 CDC73_HUMAN
Isoform —
PDB实体 22
链与序列区间 作者链 X; PDB构建体 1–531; UniProt 1–531

Transcription elongation factor SPT4

Homo sapiens

UniProt P63272

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 21 DNA 2 RNA 1 DNA-directed RNA polymerase subunit × 1 (A0A8D1DPV6) DNA-directed RNA polymerase subunit beta × 1 (A0A0B8RVL1) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RNA polymerase II subunit D × 1 (A0A4X1VM56) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase subunit × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (I3LCB2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) DNA-directed RNA polymerase II subunit RPB11-a × 1 (F1RKE4) RNA polymerase II, I and III subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 (Q7KZ85) Non-template DNA × 1 ATP-dependent DNA helicase Q5 × 1 (O94762) RNA × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) Template DNA × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WD repeat-containing protein 61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT5 × 1 (O00267) ZINC ION × 8 MAGNESIUM ION × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 SPT4H_HUMAN
Isoform —
PDB实体 23
链与序列区间 作者链 Y; PDB构建体 1–117; UniProt 1–117

Transcription elongation factor SPT5

Homo sapiens

UniProt O00267

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 21 DNA 2 RNA 1 DNA-directed RNA polymerase subunit × 1 (A0A8D1DPV6) DNA-directed RNA polymerase subunit beta × 1 (A0A0B8RVL1) DNA-directed RNA polymerase II subunit RPB3 × 1 (I3LCH3) RNA polymerase II subunit D × 1 (A0A4X1VM56) DNA-directed RNA polymerase II subunit E × 1 (I3LSI7) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (A0A4X1VEK9) DNA-directed RNA polymerase subunit × 1 (A0A4X1VKG7) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (I3LCB2) DNA-directed RNA polymerase II subunit RPB9 × 1 (P60899) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (A0A4X1VYD0) DNA-directed RNA polymerase II subunit RPB11-a × 1 (F1RKE4) RNA polymerase II, I and III subunit K × 1 (A0A4X1TRS6) Transcription elongation factor SPT6 × 1 (Q7KZ85) Non-template DNA × 1 ATP-dependent DNA helicase Q5 × 1 (O94762) RNA × 1 RNA polymerase-associated protein CTR9 homolog × 1 (Q6PD62) Template DNA × 1 RNA polymerase-associated protein LEO1 × 1 (Q8WVC0) RNA polymerase II-associated factor 1 homolog × 1 (Q8N7H5) WD repeat-containing protein 61 × 1 (Q9GZS3) Parafibromin × 1 (Q6P1J9) Transcription elongation factor SPT4 × 1 (P63272) ZINC ION × 8 MAGNESIUM ION × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 SPT5H_HUMAN
Isoform —
PDB实体 24
链与序列区间 作者链 Z; PDB构建体 1–1087; UniProt 1–1087

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

▼

2. 结构基本信息 2. Structure Basics

条目编号 entry_id9hvq
沉积日期 deposition_date2024-12-31
结构标题 titleStructure of the transcribing Pol II-DSIF-PAF-SPT6-RECQL5 complex
关键词 keywordstranscription elongation, DNA helicase, transcription-coupled repair, RNA polymerase II, TRANSCRIPTION; TRANSCRIPTION
实验方法 methodELECTRON MICROSCOPY
▼

3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

9hvq__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

9hvq__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 1010 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

9hvq__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)71.80 Å
Rg(电子密度)71.96 Å
总 Rg71.74 Å
原子数63421
残基数7738
排除体积1123100 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 9hvq__assembly_1__model_1 24-meric (24) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
▶

4. 晶体学与实验 4. Crystallography & Experiment

▶

5. 实体与聚合物信息 Entities & Polymers (26)

▶

7. 引用文献 (1)